Psyllid ID: psy9327
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 641 | 2.2.26 [Sep-21-2011] | |||||||
| P53621 | 1224 | Coatomer subunit alpha OS | yes | N/A | 0.273 | 0.142 | 0.763 | 3e-92 | |
| Q27954 | 1224 | Coatomer subunit alpha OS | yes | N/A | 0.273 | 0.142 | 0.758 | 6e-92 | |
| Q8CIE6 | 1224 | Coatomer subunit alpha OS | yes | N/A | 0.273 | 0.142 | 0.758 | 8e-92 | |
| Q94A40 | 1216 | Coatomer subunit alpha-1 | yes | N/A | 0.316 | 0.166 | 0.640 | 6e-85 | |
| Q9SJT9 | 1218 | Coatomer subunit alpha-2 | no | N/A | 0.273 | 0.143 | 0.694 | 2e-83 | |
| Q0J3D9 | 1218 | Coatomer subunit alpha-3 | yes | N/A | 0.316 | 0.166 | 0.627 | 1e-82 | |
| Q9AUR8 | 1218 | Coatomer subunit alpha-1 | yes | N/A | 0.316 | 0.166 | 0.627 | 1e-82 | |
| Q9AUR7 | 1218 | Coatomer subunit alpha-2 | yes | N/A | 0.316 | 0.166 | 0.627 | 4e-82 | |
| Q96WV5 | 1207 | Putative coatomer subunit | yes | N/A | 0.271 | 0.144 | 0.643 | 1e-79 | |
| P53622 | 1201 | Coatomer subunit alpha OS | yes | N/A | 0.291 | 0.155 | 0.581 | 2e-74 |
| >sp|P53621|COPA_HUMAN Coatomer subunit alpha OS=Homo sapiens GN=COPA PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 340 bits (871), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 155/203 (76%), Positives = 169/203 (83%), Gaps = 28/203 (13%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
QQP+FVSGG DDYKIKVWNYK R+C+FTLLGH
Sbjct: 61 KQQPLFVSGG----------------------------DDYKIKVWNYKLRRCLFTLLGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRTTFFHHEYPWILSASDDQTIR+W WQSR C+CVLTGHNHYVMCAQFHPT+D+VVS
Sbjct: 93 LDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPG 203
ASLDQT+RVWDISGLRKKN++PG
Sbjct: 153 ASLDQTVRVWDISGLRKKNLSPG 175
|
Xenin stimulates exocrine pancreatic secretion. It inhibits pentagastrin-stimulated secretion of acid, to induce exocrine pancreatic secretion and to affect small and large intestinal motility. In the gut, xenin interacts with the neurotensin receptor. Homo sapiens (taxid: 9606) |
| >sp|Q27954|COPA_BOVIN Coatomer subunit alpha OS=Bos taurus GN=COPA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 338 bits (868), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 154/203 (75%), Positives = 169/203 (83%), Gaps = 28/203 (13%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
QQP+FVSGG DDYKIKVWNYK R+C+FTLLGH
Sbjct: 61 KQQPLFVSGG----------------------------DDYKIKVWNYKLRRCLFTLLGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRTTFFHHEYPWILSASDDQTIR+W WQSR C+CVLTGHNHYVMCAQFHP++D+VVS
Sbjct: 93 LDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPG 203
ASLDQT+RVWDISGLRKKN++PG
Sbjct: 153 ASLDQTVRVWDISGLRKKNLSPG 175
|
Xenin stimulates exocrine pancreatic secretion. It inhibits pentagastrin-stimulated secretion of acid, to induce exocrine pancreatic secretion and to affect small and large intestinal motility. In the gut, xenin interacts with the neurotensin receptor. Bos taurus (taxid: 9913) |
| >sp|Q8CIE6|COPA_MOUSE Coatomer subunit alpha OS=Mus musculus GN=Copa PE=1 SV=2 | Back alignment and function description |
|---|
Score = 338 bits (867), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 154/203 (75%), Positives = 169/203 (83%), Gaps = 28/203 (13%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
QQP+FVSGG DDYKIKVWNYK R+C+FTLLGH
Sbjct: 61 KQQPLFVSGG----------------------------DDYKIKVWNYKLRRCLFTLLGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRTTFFHHEYPWILSASDDQTIR+W WQSR C+CVLTGHNHYVMCAQFHP++D+VVS
Sbjct: 93 LDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPG 203
ASLDQT+RVWDISGLRKKN++PG
Sbjct: 153 ASLDQTVRVWDISGLRKKNLSPG 175
|
Xenin stimulates exocrine pancreatic secretion. It inhibits pentagastrin-stimulated secretion of acid, to induce exocrine pancreatic secretion and to affect small and large intestinal motility. In the gut, xenin interacts with the neurotensin receptor. Mus musculus (taxid: 10090) |
| >sp|Q94A40|COPA1_ARATH Coatomer subunit alpha-1 OS=Arabidopsis thaliana GN=At1g62020 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 315 bits (808), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 148/231 (64%), Positives = 166/231 (71%), Gaps = 28/231 (12%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKS RVKGLSFHPKRPWIL+SLH+GVIQLWDYRM TL+++FDEHEGPVRG+ FH
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
N QP+FVSGG DDYKIKVWNYK +C+FTLLGH
Sbjct: 61 NSQPLFVSGG----------------------------DDYKIKVWNYKNHRCLFTLLGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRT FHHEYPWI+SASDDQTIRIW WQSR C+ VLTGHNHYVMCA FHP +D+VVS
Sbjct: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKH 231
ASLDQT+RVWDI LRKK V+P + L+ + VKY H
Sbjct: 153 ASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNSDLFGGVDAIVKYVLEGH 203
|
The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9SJT9|COPA2_ARATH Coatomer subunit alpha-2 OS=Arabidopsis thaliana GN=At2g21390 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 310 bits (794), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 141/203 (69%), Positives = 157/203 (77%), Gaps = 28/203 (13%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKS RVKGLSFHPKRPWIL+SLH+GVIQLWDYRM TL+++FDEHEGPVRG+ FH
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
N QP+FVSGG DDYKIKVWNYK +C+FTLLGH
Sbjct: 61 NSQPLFVSGG----------------------------DDYKIKVWNYKTHRCLFTLLGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRT FHHE PWI+SASDDQTIRIW WQSR CI VLTGHNHYVMCA FHP +D+VVS
Sbjct: 93 LDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPG 203
ASLDQT+RVWDI L+KK+ +P
Sbjct: 153 ASLDQTVRVWDIGALKKKSASPA 175
|
The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q0J3D9|COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica GN=Os09g0127800 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 308 bits (789), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 145/231 (62%), Positives = 164/231 (70%), Gaps = 28/231 (12%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKS RVKGLSFHP+RPWIL+SLH+GVIQ+WDYRM TLL++FDEH+GPVRG+ FH
Sbjct: 1 MLTKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
QP+FVSGG DDYKIKVWNYK +C+FTL GH
Sbjct: 61 ATQPLFVSGG----------------------------DDYKIKVWNYKTHRCLFTLHGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRT FHHEYPWI+SASDDQTIRIW WQSR C+ VLTGHNHYVMCA FHP +D+VVS
Sbjct: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKH 231
ASLDQT+RVWDI LRKK V+P L L+ + VKY H
Sbjct: 153 ASLDQTVRVWDIGALRKKTVSPADDILRLTQMNTDLFGGVDAVVKYVLEGH 203
|
The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Oryza sativa subsp. japonica (taxid: 39947) |
| >sp|Q9AUR8|COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza sativa subsp. japonica GN=Os03g0711400 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 145/231 (62%), Positives = 164/231 (70%), Gaps = 28/231 (12%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKS RVKGLSFHP+RPWIL+SLH+GVIQ+WDYRM TLL++FDEH+GPVRG+ FH
Sbjct: 1 MLTKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
QP+FVSGG DDYKIKVWNYK +C+FTL GH
Sbjct: 61 ATQPLFVSGG----------------------------DDYKIKVWNYKTHRCLFTLHGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRT FHHEYPWI+SASDDQTIRIW WQSR C+ VLTGHNHYVMCA FHP +D+VVS
Sbjct: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKH 231
ASLDQT+RVWDI LRKK V+P L L+ + VKY H
Sbjct: 153 ASLDQTVRVWDIGALRKKTVSPADDILRLTQMNTDLFGGVDAVVKYVLEGH 203
|
The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Oryza sativa subsp. japonica (taxid: 39947) |
| >sp|Q9AUR7|COPA2_ORYSJ Coatomer subunit alpha-2 OS=Oryza sativa subsp. japonica GN=Os03g0711500 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 306 bits (784), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 145/231 (62%), Positives = 165/231 (71%), Gaps = 28/231 (12%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKS RVKGLSFHP+RPWIL+SLH+GVIQ+WDYRM TLL++FDEH+GPVRG+ FH
Sbjct: 1 MLTKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
QP+FVSGG DDYKIKVWNYK +C+FTL GH
Sbjct: 61 ATQPLFVSGG----------------------------DDYKIKVWNYKTHRCLFTLHGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRT FHHE PWI+SASDDQTIRIW WQSR C+ VLTGHNHYVMCA FHP +D+VVS
Sbjct: 93 LDYIRTVQFHHECPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKH 231
ASLDQT+RVWDIS LRKK+V+P L L+ + VKY H
Sbjct: 153 ASLDQTVRVWDISALRKKSVSPADDILRLTQMNTDLFGGVDAVVKYVLEGH 203
|
The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Oryza sativa subsp. japonica (taxid: 39947) |
| >sp|Q96WV5|COPA_SCHPO Putative coatomer subunit alpha OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPJ4664.04 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 297 bits (761), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 130/202 (64%), Positives = 153/202 (75%), Gaps = 28/202 (13%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFE++S+R KG++FHP +PWIL+SLHNG IQLWDYRM TLL++FD H+GPVRGI FH
Sbjct: 3 MLTKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFH 62
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
QP+FVSGG DDYK+ VWNYK RK +F+L GH
Sbjct: 63 PTQPLFVSGG----------------------------DDYKVNVWNYKSRKLLFSLCGH 94
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
+DY+R FHHEYPWILS SDDQTIRIW WQSRNCI +LTGH+HYVMCA FHP++D++VS
Sbjct: 95 MDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVS 154
Query: 181 ASLDQTIRVWDISGLRKKNVAP 202
ASLDQT+RVWDISGLR KN AP
Sbjct: 155 ASLDQTVRVWDISGLRMKNAAP 176
|
The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|P53622|COPA_YEAST Coatomer subunit alpha OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=COP1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 150/215 (69%), Gaps = 28/215 (13%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFE+KS R KG++FHP RPW+L +L + IQLWDYRM TLL +F++HEGPVRG+ FH
Sbjct: 3 MLTKFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFH 62
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
QPIFVS G DDY IKVW+ KC++TL GH
Sbjct: 63 PTQPIFVSAG----------------------------DDYTIKVWSLDTNKCLYTLTGH 94
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDY+RT FFH E PWI+SASDDQTIRIW WQ+R I LTGHNH+VMCAQFHPTDD++VS
Sbjct: 95 LDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLTGHNHFVMCAQFHPTDDLIVS 154
Query: 181 ASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKH 215
ASLD+TIR+WDISGLRK++ APG M ++
Sbjct: 155 ASLDETIRIWDISGLRKRHSAPGTSSFEEQMSAQQ 189
|
The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 641 | ||||||
| 242015300 | 1222 | coatomer alpha subunit, putative [Pedicu | 0.279 | 0.146 | 0.797 | 9e-96 | |
| 322780808 | 1209 | hypothetical protein SINV_04529 [Solenop | 0.288 | 0.153 | 0.769 | 1e-94 | |
| 307188017 | 1208 | Coatomer subunit alpha [Camponotus flori | 0.288 | 0.153 | 0.769 | 3e-94 | |
| 332026185 | 1209 | Coatomer subunit alpha [Acromyrmex echin | 0.288 | 0.153 | 0.765 | 7e-94 | |
| 291222576 | 1223 | PREDICTED: coatomer protein complex subu | 0.288 | 0.151 | 0.760 | 2e-93 | |
| 291222578 | 1209 | PREDICTED: coatomer protein complex subu | 0.288 | 0.153 | 0.760 | 2e-93 | |
| 66504662 | 1214 | PREDICTED: coatomer subunit alpha isofor | 0.288 | 0.152 | 0.765 | 4e-93 | |
| 380014926 | 1214 | PREDICTED: LOW QUALITY PROTEIN: coatomer | 0.288 | 0.152 | 0.765 | 5e-93 | |
| 345488489 | 1146 | PREDICTED: coatomer subunit alpha-like [ | 0.279 | 0.156 | 0.782 | 8e-93 | |
| 383850572 | 1214 | PREDICTED: coatomer subunit alpha [Megac | 0.288 | 0.152 | 0.755 | 4e-92 |
| >gi|242015300|ref|XP_002428302.1| coatomer alpha subunit, putative [Pediculus humanus corporis] gi|212512887|gb|EEB15564.1| coatomer alpha subunit, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 165/207 (79%), Positives = 175/207 (84%), Gaps = 28/207 (13%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TLL+KFDEH+GPVRGICFH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLLDKFDEHDGPVRGICFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
NQQP+FVSGG DDYKIKVWNYKQR+CIFTLLGH
Sbjct: 61 NQQPLFVSGG----------------------------DDYKIKVWNYKQRRCIFTLLGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRTT+FHHEYPWILSASDDQTIRIW WQSRNCICVLTGHNHYVMCAQFHP++DI+VS
Sbjct: 93 LDYIRTTYFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPSEDIIVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPGMGKL 207
ASLDQT+RVWDISGLRKKNVAPG G L
Sbjct: 153 ASLDQTVRVWDISGLRKKNVAPGPGGL 179
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|322780808|gb|EFZ10037.1| hypothetical protein SINV_04529 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 164/213 (76%), Positives = 175/213 (82%), Gaps = 28/213 (13%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPW+L+SLHNGVIQLWDYRM LL+KFDEH+GPVRGICFH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCALLDKFDEHDGPVRGICFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
NQQP+FVSGG DDYKIKVWNYKQR+CIFTLLGH
Sbjct: 61 NQQPLFVSGG----------------------------DDYKIKVWNYKQRRCIFTLLGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRTT FHHEYPWILSASDDQTIRIW WQSR CICVLTGHNHYVMCAQFHPT+DI+VS
Sbjct: 93 LDYIRTTMFHHEYPWILSASDDQTIRIWNWQSRTCICVLTGHNHYVMCAQFHPTEDIIVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKS 213
ASLDQT+RVWDISGLRKKNVAPG G L +K+
Sbjct: 153 ASLDQTVRVWDISGLRKKNVAPGPGGLEDHLKN 185
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307188017|gb|EFN72866.1| Coatomer subunit alpha [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 164/213 (76%), Positives = 175/213 (82%), Gaps = 28/213 (13%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPW+L+SLHNGVIQLWDYRM TLL+KFDEH+GPVRGICFH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLLDKFDEHDGPVRGICFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
NQQP+FVSGG DDYKIKVWNYKQR+CIFTLLGH
Sbjct: 61 NQQPLFVSGG----------------------------DDYKIKVWNYKQRRCIFTLLGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRTT FH EYPWILSASDDQTIRIW WQSR CICVLTGHNHYVMCAQFHPT+DI+VS
Sbjct: 93 LDYIRTTVFHQEYPWILSASDDQTIRIWNWQSRTCICVLTGHNHYVMCAQFHPTEDIIVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKS 213
ASLDQT+RVWDISGLRKKNVAPG G L +K+
Sbjct: 153 ASLDQTVRVWDISGLRKKNVAPGPGGLEDHLKN 185
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332026185|gb|EGI66327.1| Coatomer subunit alpha [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 163/213 (76%), Positives = 174/213 (81%), Gaps = 28/213 (13%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPW+L+SLHNGVIQLWDYRM LL+KFDEH+GPVRGICFH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCALLDKFDEHDGPVRGICFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
NQQP+FVSGG DDYKIKVWNYKQR+CIFTLLGH
Sbjct: 61 NQQPLFVSGG----------------------------DDYKIKVWNYKQRRCIFTLLGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRTT FH EYPWILSASDDQTIRIW WQSR CICVLTGHNHYVMCAQFHPT+DI+VS
Sbjct: 93 LDYIRTTMFHQEYPWILSASDDQTIRIWNWQSRTCICVLTGHNHYVMCAQFHPTEDIIVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKS 213
ASLDQT+RVWDISGLRKKNVAPG G L +K+
Sbjct: 153 ASLDQTVRVWDISGLRKKNVAPGPGGLEDHLKN 185
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|291222576|ref|XP_002731289.1| PREDICTED: coatomer protein complex subunit alpha-like isoform 1 [Saccoglossus kowalevskii] | Back alignment and taxonomy information |
|---|
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 162/213 (76%), Positives = 175/213 (82%), Gaps = 28/213 (13%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNG+IQLWDYRM TLL+KFDEH+GPVRGICFH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGIIQLWDYRMCTLLDKFDEHDGPVRGICFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
NQQP+FVSGG DDYKIKVWNYK R+C+FTLLGH
Sbjct: 61 NQQPLFVSGG----------------------------DDYKIKVWNYKLRRCLFTLLGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRTT+FHHEYPWILSASDDQTIRIW WQSRNCICVLTGHNHYVMCA FHP +D+VVS
Sbjct: 93 LDYIRTTYFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCANFHPAEDLVVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKS 213
ASLDQT+RVWDISGLRKKNVAPG G L +K+
Sbjct: 153 ASLDQTVRVWDISGLRKKNVAPGPGGLDDHLKT 185
|
Source: Saccoglossus kowalevskii Species: Saccoglossus kowalevskii Genus: Saccoglossus Family: Harrimaniidae Order: Class: Enteropneusta Phylum: Hemichordata Superkingdom: Eukaryota |
| >gi|291222578|ref|XP_002731290.1| PREDICTED: coatomer protein complex subunit alpha-like isoform 2 [Saccoglossus kowalevskii] | Back alignment and taxonomy information |
|---|
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 162/213 (76%), Positives = 175/213 (82%), Gaps = 28/213 (13%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNG+IQLWDYRM TLL+KFDEH+GPVRGICFH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGIIQLWDYRMCTLLDKFDEHDGPVRGICFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
NQQP+FVSGG DDYKIKVWNYK R+C+FTLLGH
Sbjct: 61 NQQPLFVSGG----------------------------DDYKIKVWNYKLRRCLFTLLGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRTT+FHHEYPWILSASDDQTIRIW WQSRNCICVLTGHNHYVMCA FHP +D+VVS
Sbjct: 93 LDYIRTTYFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCANFHPAEDLVVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKS 213
ASLDQT+RVWDISGLRKKNVAPG G L +K+
Sbjct: 153 ASLDQTVRVWDISGLRKKNVAPGPGGLDDHLKT 185
|
Source: Saccoglossus kowalevskii Species: Saccoglossus kowalevskii Genus: Saccoglossus Family: Harrimaniidae Order: Class: Enteropneusta Phylum: Hemichordata Superkingdom: Eukaryota |
| >gi|66504662|ref|XP_623198.1| PREDICTED: coatomer subunit alpha isoform 1 [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 163/213 (76%), Positives = 174/213 (81%), Gaps = 28/213 (13%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPW+L+SLHNGVIQLWDYRM TLL+KFDEH+GPVRGICFH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLLDKFDEHDGPVRGICFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
NQQP+FVSGG DDYKIKVWNYKQR+CIFTLLGH
Sbjct: 61 NQQPLFVSGG----------------------------DDYKIKVWNYKQRRCIFTLLGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRTT FH EYPWILSASDDQTIRIW WQSR CICVLTGHNHYVMCAQFH T+DI+VS
Sbjct: 93 LDYIRTTVFHQEYPWILSASDDQTIRIWNWQSRTCICVLTGHNHYVMCAQFHLTEDIIVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKS 213
ASLDQT+RVWDISGLRKKNVAPG G L +K+
Sbjct: 153 ASLDQTVRVWDISGLRKKNVAPGPGGLEDHLKN 185
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380014926|ref|XP_003691465.1| PREDICTED: LOW QUALITY PROTEIN: coatomer subunit alpha-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 163/213 (76%), Positives = 174/213 (81%), Gaps = 28/213 (13%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPW+L+SLHNGVIQLWDYRM TLL+KFDEH+GPVRGICFH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLLDKFDEHDGPVRGICFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
NQQP+FVSGG DDYKIKVWNYKQR+CIFTLLGH
Sbjct: 61 NQQPLFVSGG----------------------------DDYKIKVWNYKQRRCIFTLLGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRTT FH EYPWILSASDDQTIRIW WQSR CICVLTGHNHYVMCAQFH T+DI+VS
Sbjct: 93 LDYIRTTVFHQEYPWILSASDDQTIRIWNWQSRTCICVLTGHNHYVMCAQFHLTEDIIVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKS 213
ASLDQT+RVWDISGLRKKNVAPG G L +K+
Sbjct: 153 ASLDQTVRVWDISGLRKKNVAPGPGGLEDHLKN 185
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|345488489|ref|XP_001601104.2| PREDICTED: coatomer subunit alpha-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 162/207 (78%), Positives = 171/207 (82%), Gaps = 28/207 (13%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL SLHNGVIQLWDYRM TLLEKFDEH+GPVRGICFH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILVSLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
+QQPIFVSGG DDYKIKVWNYKQR+CIFTLLGH
Sbjct: 61 SQQPIFVSGG----------------------------DDYKIKVWNYKQRRCIFTLLGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRTT FH+EYPWILS+SDDQTIRIW WQSR CICVLTGHNHYVMCAQFHP++DI+VS
Sbjct: 93 LDYIRTTVFHYEYPWILSSSDDQTIRIWNWQSRTCICVLTGHNHYVMCAQFHPSEDIIVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPGMGKL 207
ASLDQT+RVWDISGLRKKNVAPG L
Sbjct: 153 ASLDQTVRVWDISGLRKKNVAPGPSGL 179
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383850572|ref|XP_003700869.1| PREDICTED: coatomer subunit alpha [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 161/213 (75%), Positives = 172/213 (80%), Gaps = 28/213 (13%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKG+SFHPKRPWIL SLHNGVIQLWDYRM TLL+KFDEH+GPVRGICFH
Sbjct: 1 MLTKFETKSARVKGISFHPKRPWILVSLHNGVIQLWDYRMCTLLDKFDEHDGPVRGICFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
+QQP+F SGG DDYKIKVWNYKQR+CIFTLLGH
Sbjct: 61 SQQPLFASGG----------------------------DDYKIKVWNYKQRRCIFTLLGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRT FH EYPWILSASDDQTIRIW WQSR CICVLTGHNHYVMCAQFHPT+DI+VS
Sbjct: 93 LDYIRTIVFHQEYPWILSASDDQTIRIWNWQSRTCICVLTGHNHYVMCAQFHPTEDIIVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKS 213
ASLDQT+RVWDISGLRKKNVAPG G L +K+
Sbjct: 153 ASLDQTVRVWDISGLRKKNVAPGPGGLEDHLKN 185
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 641 | ||||||
| UNIPROTKB|G3V6T1 | 1224 | Copa "Protein Copa" [Rattus no | 0.251 | 0.131 | 0.628 | 3.8e-168 | |
| UNIPROTKB|F1RJX8 | 1224 | COPA "Uncharacterized protein" | 0.251 | 0.131 | 0.628 | 3.8e-168 | |
| UNIPROTKB|P53621 | 1224 | COPA "Coatomer subunit alpha" | 0.251 | 0.131 | 0.634 | 4.6e-168 | |
| UNIPROTKB|Q27954 | 1224 | COPA "Coatomer subunit alpha" | 0.251 | 0.131 | 0.628 | 7.8e-168 | |
| MGI|MGI:1334462 | 1224 | Copa "coatomer protein complex | 0.251 | 0.131 | 0.628 | 1.3e-167 | |
| UNIPROTKB|F1PU93 | 1214 | COPA "Coatomer subunit alpha" | 0.165 | 0.087 | 0.877 | 2.4e-165 | |
| ZFIN|ZDB-GENE-020905-2 | 1226 | copa "coatomer protein complex | 0.251 | 0.131 | 0.634 | 3e-162 | |
| UNIPROTKB|H9KZL3 | 1169 | LOC100859596 "Uncharacterized | 0.251 | 0.137 | 0.628 | 2.1e-150 | |
| UNIPROTKB|H9L3L2 | 1134 | LOC100859596 "Uncharacterized | 0.251 | 0.141 | 0.628 | 3e-150 | |
| FB|FBgn0025725 | 1234 | alphaCop "alpha-coatomer prote | 0.269 | 0.140 | 0.632 | 3.8e-138 |
| UNIPROTKB|G3V6T1 Copa "Protein Copa" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 575 (207.5 bits), Expect = 3.8e-168, Sum P(4) = 3.8e-168
Identities = 110/175 (62%), Positives = 132/175 (75%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQGCIL----ESRNEPCL---FR 92
+L KF+ V+G+ FH ++P I S G + + Y+ C L + + P F
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+ L GDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
WQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 175
|
|
| UNIPROTKB|F1RJX8 COPA "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 575 (207.5 bits), Expect = 3.8e-168, Sum P(4) = 3.8e-168
Identities = 110/175 (62%), Positives = 132/175 (75%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQGCIL----ESRNEPCL---FR 92
+L KF+ V+G+ FH ++P I S G + + Y+ C L + + P F
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+ L GDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
WQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 175
|
|
| UNIPROTKB|P53621 COPA "Coatomer subunit alpha" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 579 (208.9 bits), Expect = 4.6e-168, Sum P(4) = 4.6e-168
Identities = 111/175 (63%), Positives = 132/175 (75%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQGCIL----ESRNEPCL---FR 92
+L KF+ V+G+ FH ++P I S G + + Y+ C L + + P F
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+ L GDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
WQSR C+CVLTGHNHYVMCAQFHPT+D+VVSASLDQT+RVWDISGLRKKN++PG
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDISGLRKKNLSPG 175
|
|
| UNIPROTKB|Q27954 COPA "Coatomer subunit alpha" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 575 (207.5 bits), Expect = 7.8e-168, Sum P(4) = 7.8e-168
Identities = 110/175 (62%), Positives = 132/175 (75%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQGCIL----ESRNEPCL---FR 92
+L KF+ V+G+ FH ++P I S G + + Y+ C L + + P F
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+ L GDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
WQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 175
|
|
| MGI|MGI:1334462 Copa "coatomer protein complex subunit alpha" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 575 (207.5 bits), Expect = 1.3e-167, Sum P(4) = 1.3e-167
Identities = 110/175 (62%), Positives = 132/175 (75%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQGCIL----ESRNEPCL---FR 92
+L KF+ V+G+ FH ++P I S G + + Y+ C L + + P F
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+ L GDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
WQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 175
|
|
| UNIPROTKB|F1PU93 COPA "Coatomer subunit alpha" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 554 (200.1 bits), Expect = 2.4e-165, Sum P(4) = 2.4e-165
Identities = 93/106 (87%), Positives = 103/106 (97%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
GDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W WQSR C+C
Sbjct: 60 GDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVC 119
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
VLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG
Sbjct: 120 VLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 165
|
|
| ZFIN|ZDB-GENE-020905-2 copa "coatomer protein complex, subunit alpha" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 576 (207.8 bits), Expect = 3.0e-162, Sum P(4) = 3.0e-162
Identities = 111/175 (63%), Positives = 132/175 (75%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQGCIL----ESRNEPCL---FR 92
+L KF+ V+G+ FH ++P I S G + + Y+ C L + + P F
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+ L GDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
WQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 175
|
|
| UNIPROTKB|H9KZL3 LOC100859596 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 575 (207.5 bits), Expect = 2.1e-150, Sum P(4) = 2.1e-150
Identities = 110/175 (62%), Positives = 132/175 (75%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQGCIL----ESRNEPCL---FR 92
+L KF+ V+G+ FH ++P I S G + + Y+ C L + + P F
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+ L GDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
WQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 175
|
|
| UNIPROTKB|H9L3L2 LOC100859596 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 575 (207.5 bits), Expect = 3.0e-150, Sum P(4) = 3.0e-150
Identities = 110/175 (62%), Positives = 132/175 (75%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQGCIL----ESRNEPCL---FR 92
+L KF+ V+G+ FH ++P I S G + + Y+ C L + + P F
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+ L GDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
WQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 175
|
|
| FB|FBgn0025725 alphaCop "alpha-coatomer protein" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 581 (209.6 bits), Expect = 3.8e-138, Sum P(3) = 3.8e-138
Identities = 119/188 (63%), Positives = 137/188 (72%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQ-GCILESRNE---PC---LFR 92
+L F+ V+G+ FH ++P I VS G + + Y+ +LE +E P F
Sbjct: 1 MLTNFESKSARVKGLSFHPKRPWILVSLHSGVIQLWDYRMHTLLEKFDEHDGPVRGVAFH 60
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+ L GDDYKIKVWNYKQR+CIFTLL HLDY+RT FHHEYPWILSASDDQTIRIW
Sbjct: 61 QQMPLFVSGGDDYKIKVWNYKQRRCIFTLLAHLDYVRTVAFHHEYPWILSASDDQTIRIW 120
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLV 208
WQSRNCICVLTGHNHYVMCAQFHPT+D +VSASLDQT+RVWDISGLRKKNVAPG G L
Sbjct: 121 NWQSRNCICVLTGHNHYVMCAQFHPTEDQIVSASLDQTVRVWDISGLRKKNVAPGPGGLD 180
Query: 209 LSMKSKHP 216
+K HP
Sbjct: 181 DHLKG-HP 187
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 641 | |||
| pfam06957 | 421 | pfam06957, COPI_C, Coatomer (COPI) alpha subunit C | 8e-47 | |
| pfam04053 | 429 | pfam04053, Coatomer_WDAD, Coatomer WD associated r | 8e-38 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 5e-37 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 1e-32 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 3e-32 | |
| pfam04053 | 429 | pfam04053, Coatomer_WDAD, Coatomer WD associated r | 4e-28 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-22 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-18 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 8e-15 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 1e-14 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 9e-10 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 3e-09 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 2e-07 | |
| PLN00181 | 793 | PLN00181, PLN00181, protein SPA1-RELATED; Provisio | 3e-06 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 4e-06 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 4e-06 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-05 | |
| pfam04053 | 429 | pfam04053, Coatomer_WDAD, Coatomer WD associated r | 3e-04 | |
| PTZ00420 | 568 | PTZ00420, PTZ00420, coronin; Provisional | 8e-04 |
| >gnl|CDD|219240 pfam06957, COPI_C, Coatomer (COPI) alpha subunit C-terminus | Back alignment and domain information |
|---|
Score = 170 bits (432), Expect = 8e-47
Identities = 70/131 (53%), Positives = 92/131 (70%), Gaps = 3/131 (2%)
Query: 426 GSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTR--KGPGIK 483
GSFETA +LLHDQ+GV NF P++ +FL Y SRT+Y LP L V +P R K
Sbjct: 131 GSFETAMRLLHDQLGVVNFAPFKDLFLQLYAGSRTSYRALPGLPSVSIYPERNWSESNSK 190
Query: 484 ENSHPATNIKLEQLIAKIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQ 543
N PA KL QL ++Q YQLTT+GKF +A+EK R++L+SIPL+VV +K+E+ EA+Q
Sbjct: 191 -NGPPAVGFKLSQLAKRLQAAYQLTTNGKFGEAVEKFRSILLSIPLIVVDSKQEVAEAQQ 249
Query: 544 IINICKEYIVG 554
+I IC+EYIVG
Sbjct: 250 LITICREYIVG 260
|
This family represents the C-terminus (approximately 500 residues) of the eukaryotic coatomer alpha subunit. Coatomer (COPI) is a large cytosolic protein complex which forms a coat around vesicles budding from the Golgi apparatus. Such coatomer-coated vesicles have been proposed to play a role in many distinct steps of intracellular transport. Note that many family members also contain the pfam04053 domain. Length = 421 |
| >gnl|CDD|217864 pfam04053, Coatomer_WDAD, Coatomer WD associated region | Back alignment and domain information |
|---|
Score = 145 bits (368), Expect = 8e-38
Identities = 60/126 (47%), Positives = 77/126 (61%), Gaps = 13/126 (10%)
Query: 230 KHTLHICNRKMEP--------LCNIHE-NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH 280
K T++I N +E +HE RVKSGAWD VFIYTT NH+KY +VNG+
Sbjct: 161 KDTVYILNYNLEAVAEGVEDAFEVLHEVTERVKSGAWDGD-VFIYTTLNHLKY-LVNGET 218
Query: 281 GIIRTLDLPIYITKIKG--NQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVR 338
GII+ LD P+Y+ N+VY LDR+ + IDPTE +FK AL+ YEEVL I+
Sbjct: 219 GIIKHLDKPMYLLGYLPKDNRVYLLDRDGNVVSYEIDPTELEFKTALLRKDYEEVLRIIA 278
Query: 339 NSRLVG 344
NS L+G
Sbjct: 279 NSNLLG 284
|
This region is composed of WD40 repeats. Length = 429 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 139 bits (352), Expect = 5e-37
Identities = 48/195 (24%), Positives = 80/195 (41%), Gaps = 28/195 (14%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
+ V ++F P + + +G I++WD LL H GPVR + S
Sbjct: 9 TGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLAS 68
Query: 69 GGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTF 128
G D I++W+ + +C+ TL GH Y+ +
Sbjct: 69 GS----------------------------SDKTIRLWDLETGECVRTLTGHTSYVSSVA 100
Query: 129 FHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIR 188
F + + S+S D+TI++W ++ C+ L GH +V F P V S+S D TI+
Sbjct: 101 FSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIK 160
Query: 189 VWDISGLRKKNVAPG 203
+WD+ + G
Sbjct: 161 LWDLRTGKCVATLTG 175
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 1e-32
Identities = 51/200 (25%), Positives = 77/200 (38%), Gaps = 28/200 (14%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
V ++F P + SS + I++WD L H V + F FV+
Sbjct: 96 VSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFS-PDGTFVASSS 154
Query: 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131
D IK+W+ + KC+ TL GH + + F
Sbjct: 155 ---------------------------QDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSP 187
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
+ +LS+S D TI++W + C+ L GH + V F P ++ S S D TIRVWD
Sbjct: 188 DGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWD 247
Query: 192 ISGLRKKNVAPGMGKLVLSM 211
+ G V S+
Sbjct: 248 LRTGECVQTLSGHTNSVTSL 267
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 125 bits (317), Expect = 3e-32
Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 28/190 (14%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
LT + V ++F P ++ SS +G I+LWD R + H G V + F
Sbjct: 128 LTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSP 187
Query: 62 QQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL 121
+S D IK+W+ KC+ TL GH
Sbjct: 188 DGEKLLSS----------------------------SSDGTIKLWDLSTGKCLGTLRGHE 219
Query: 122 DYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSA 181
+ + + F + + S S+D TIR+W ++ C+ L+GH + V + P + S
Sbjct: 220 NGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASG 279
Query: 182 SLDQTIRVWD 191
S D TIR+WD
Sbjct: 280 SADGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|217864 pfam04053, Coatomer_WDAD, Coatomer WD associated region | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 4e-28
Identities = 44/88 (50%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Query: 556 NHIKYAIVNGDHGIIRTLDLPIYITKIKG--NQVYYLDRECSPHVLRIDPTEFKFKLALI 613
NH+KY +VNG+ GII+ LD P+Y+ N+VY LDR+ + IDPTE +FK AL+
Sbjct: 208 NHLKY-LVNGETGIIKHLDKPMYLLGYLPKDNRVYLLDRDGNVVSYEIDPTELEFKTALL 266
Query: 614 NHKYEEVLHIVRNSRLVGQSIIAYLQQK 641
YEEVL I+ NS L+GQ II +L++K
Sbjct: 267 RKDYEEVLRIIANSNLLGQKIIRFLEKK 294
|
This region is composed of WD40 repeats. Length = 429 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 100 bits (249), Expect = 2e-22
Identities = 58/279 (20%), Positives = 101/279 (36%), Gaps = 31/279 (11%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILS-SLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+ E S V L+F P + S S +G I+LWD R L H PV + F
Sbjct: 148 IRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFS 207
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL-G 119
+ ++ G D I++W+ K + + L G
Sbjct: 208 PDGGLLIASG---------------------------SSDGTIRLWDLSTGKLLRSTLSG 240
Query: 120 HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS-RNCICVLTGHNHYVMCAQFHPTDDIV 178
H D + + F + + S S D TIR+W +S + + L+GH+ V+ F P ++
Sbjct: 241 HSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLL 299
Query: 179 VSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238
S S D T+R+WD+ + + G + R
Sbjct: 300 ASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLR 359
Query: 239 KMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277
+PL + ++ V S ++ G + + S + +
Sbjct: 360 TGKPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWD 398
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 88.2 bits (217), Expect = 2e-18
Identities = 54/213 (25%), Positives = 86/213 (40%), Gaps = 19/213 (8%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYR-MNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK--- 71
SF P + S +G I+LWD R ++LL H V + F + SG
Sbjct: 248 SFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGT 307
Query: 72 --------------MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL 117
+ + ++G + P + S DD I++W+ + K + TL
Sbjct: 308 VRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTL 367
Query: 118 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177
GH + + F + + S S D T+R+W + + + L GH V F P
Sbjct: 368 EGH-SNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKS 426
Query: 178 VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLS 210
+ S S D TIR+WD+ K GK++ S
Sbjct: 427 LASGSSDNTIRLWDLKTSLKSVSFSPDGKVLAS 459
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 77.1 bits (188), Expect = 8e-15
Identities = 62/273 (22%), Positives = 96/273 (35%), Gaps = 45/273 (16%)
Query: 23 WILSSLHNGVIQLWDYR-MNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81
+ SS +G ++LWD L+ + H V + F + SG
Sbjct: 126 LLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGS----------- 174
Query: 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPW-ILSAS 140
D IK+W+ + K + TL GH D + + F + I S S
Sbjct: 175 ----------------SLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGS 218
Query: 141 DDQTIRIWYWQSRNCI-CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK- 198
D TIR+W + + L+GH+ V+ + F P ++ S S D TIR+WD+
Sbjct: 219 SDGTIRLWDLSTGKLLRSTLSGHSDSVVSS-FSPDGSLLASGSSDGTIRLWDLRSSSSLL 277
Query: 199 NVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNI--HENTRVKSGA 256
G VLS+ P K + K+ + HE V S +
Sbjct: 278 RTLSGHSSSVLSVAF-SPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEG-PVSSLS 335
Query: 257 WDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLP 289
+ + + D G IR DL
Sbjct: 336 F---------SPDGSLLVSGGSDDGTIRLWDLR 359
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 76.3 bits (186), Expect = 1e-14
Identities = 57/289 (19%), Positives = 102/289 (35%), Gaps = 45/289 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
+ L +L+ L + ++ L D HE + I F + +SG
Sbjct: 30 LLSLGSSESGILLLALLSDSLVSLPDLSSLL----LRGHEDSITSIAFSPDGELLLSGSS 85
Query: 71 --KMIVMAYQG-----CILESRNEPCLFRIKSVLGD-----------DYKIKVWNY-KQR 111
+ + LE ++ + ++ D D +K+W+
Sbjct: 86 DGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPG 145
Query: 112 KCIFTLLGHLDYIRTTFFHHEYPWILSASD-DQTIRIWYWQSRNCICVLTGHNHYVMCAQ 170
K I TL GH + + + F + + S S D TI++W ++ + L GH V
Sbjct: 146 KLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLA 205
Query: 171 FHPTDD-IVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKY--- 226
F P ++ S S D TIR+WD+S GKL+ S S H
Sbjct: 206 FSPDGGLLIASGSSDGTIRLWDLS----------TGKLLRSTLSGHSDSVVSSFSPDGSL 255
Query: 227 ---CNPKHTLHICNRKMEPLC---NIHENTRVKSGAWDESGVFIYTTSN 269
+ T+ + + + ++ V S A+ G + + S+
Sbjct: 256 LASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSS 304
|
Length = 466 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 9e-10
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
S + L GH V F P + S S D TI++WD
Sbjct: 1 SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 3e-09
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
+ L GH V F P +++ S S D T+RVWD
Sbjct: 1 GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 155 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194
L GH V C F P ++ + S D TI+VWD+
Sbjct: 1 LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLET 40
|
Length = 289 |
| >gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Score = 50.1 bits (119), Expect = 3e-06
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 33/173 (19%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83
+ SS GV+Q+WD + L+ + EHE V I + + P ++ G
Sbjct: 548 VASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGS------------ 595
Query: 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ 143
DD +K+W+ Q I T+ + F + S D
Sbjct: 596 ---------------DDGSVKLWSINQGVSIGTIKTKANICCVQFPSESGRSLAFGSADH 640
Query: 144 TIRIWYWQSRNC---ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+++Y+ RN +C + GH+ V +F + +V S+S D T+++WD+S
Sbjct: 641 --KVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSSTLV-SSSTDNTLKLWDLS 690
|
Length = 793 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 4e-06
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 110 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+ + TL GH + + F + ++ S SDD TI++W
Sbjct: 1 SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLW 39
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 4e-06
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 111 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
K + TL GH + + F + + S SDD T+R+W
Sbjct: 1 GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVW 38
|
Length = 39 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 47.4 bits (111), Expect = 2e-05
Identities = 42/198 (21%), Positives = 71/198 (35%), Gaps = 15/198 (7%)
Query: 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS 140
L S + L D + + + L GH D I + F + +LS S
Sbjct: 29 SLLSLGSSESGILLLALLSDSLVSLPDLSSL----LLRGHEDSITSIAFSPDGELLLSGS 84
Query: 141 DDQTIRIWYWQ-SRNCICVLTG-HNHYVMCAQFHPTDD---IVVSASLDQTIRVWDISGL 195
D TI++W I L G H+ V D ++ S+SLD T+++WD+S
Sbjct: 85 SDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTP 144
Query: 196 RK-KNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTR--V 252
K G + V S+ P K + T+ + + + + V
Sbjct: 145 GKLIRTLEGHSESVTSLAF-SPDGKLL--ASGSSLDGTIKLWDLRTGKPLSTLAGHTDPV 201
Query: 253 KSGAWDESGVFIYTTSNH 270
S A+ G + + +
Sbjct: 202 SSLAFSPDGGLLIASGSS 219
|
Length = 466 |
| >gnl|CDD|217864 pfam04053, Coatomer_WDAD, Coatomer WD associated region | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 3e-04
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 339 NSRLVGEVGERIKILKSCGQTSLAYLTAATHGL 371
N+ +G+V + + IL G+ AYL A T+G
Sbjct: 397 NALYLGDVEKCVDILIKTGRLPEAYLFAKTYGP 429
|
This region is composed of WD40 repeats. Length = 429 |
| >gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 8e-04
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 22/170 (12%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIW--------YWQSR 153
I++ N ++ + L GH I F+ + IL S S+D TIR+W + +
Sbjct: 56 IRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIK 115
Query: 154 NCICVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMK 212
+ C+L GH + ++P + I+ S+ D + +WDI K+ M K + S+K
Sbjct: 116 DPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIEN-EKRAFQINMPKKLSSLK 174
Query: 213 SKHPIWKYCKPV--KYCNPKHTLHICNRKMEPLCN---IHENTRVKSGAW 257
W + C KH +HI + + + + + IH+ + W
Sbjct: 175 -----WNIKGNLLSGTCVGKH-MHIIDPRKQEIASSFHIHDGGKNTKNIW 218
|
Length = 568 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 641 | |||
| KOG0292|consensus | 1202 | 100.0 | ||
| KOG0292|consensus | 1202 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| PF06957 | 422 | COPI_C: Coatomer (COPI) alpha subunit C-terminus; | 100.0 | |
| KOG0276|consensus | 794 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0285|consensus | 460 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0284|consensus | 464 | 100.0 | ||
| KOG0276|consensus | 794 | 99.97 | ||
| KOG0275|consensus | 508 | 99.97 | ||
| KOG0273|consensus | 524 | 99.97 | ||
| KOG0263|consensus | 707 | 99.97 | ||
| KOG0295|consensus | 406 | 99.97 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.97 | |
| KOG0266|consensus | 456 | 99.97 | ||
| KOG0645|consensus | 312 | 99.97 | ||
| KOG0284|consensus | 464 | 99.97 | ||
| KOG0296|consensus | 399 | 99.97 | ||
| KOG0263|consensus | 707 | 99.97 | ||
| KOG0286|consensus | 343 | 99.96 | ||
| KOG0265|consensus | 338 | 99.96 | ||
| KOG0315|consensus | 311 | 99.96 | ||
| KOG0318|consensus | 603 | 99.96 | ||
| KOG0282|consensus | 503 | 99.96 | ||
| KOG0266|consensus | 456 | 99.96 | ||
| KOG0318|consensus | 603 | 99.96 | ||
| KOG0291|consensus | 893 | 99.96 | ||
| KOG0316|consensus | 307 | 99.96 | ||
| KOG0285|consensus | 460 | 99.96 | ||
| KOG0291|consensus | 893 | 99.96 | ||
| KOG0281|consensus | 499 | 99.96 | ||
| KOG0295|consensus | 406 | 99.96 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.96 | |
| KOG0273|consensus | 524 | 99.95 | ||
| KOG0281|consensus | 499 | 99.95 | ||
| KOG0645|consensus | 312 | 99.95 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.95 | |
| KOG0315|consensus | 311 | 99.95 | ||
| KOG0319|consensus | 775 | 99.94 | ||
| KOG0265|consensus | 338 | 99.94 | ||
| KOG0283|consensus | 712 | 99.94 | ||
| KOG0319|consensus | 775 | 99.94 | ||
| KOG0274|consensus | 537 | 99.94 | ||
| KOG0310|consensus | 487 | 99.94 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.93 | |
| PTZ00421 | 493 | coronin; Provisional | 99.93 | |
| KOG0310|consensus | 487 | 99.93 | ||
| KOG0274|consensus | 537 | 99.93 | ||
| KOG0301|consensus | 745 | 99.93 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.93 | |
| KOG0278|consensus | 334 | 99.93 | ||
| KOG0300|consensus | 481 | 99.93 | ||
| KOG0293|consensus | 519 | 99.93 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.92 | |
| KOG0643|consensus | 327 | 99.92 | ||
| KOG0316|consensus | 307 | 99.92 | ||
| KOG0282|consensus | 503 | 99.92 | ||
| KOG0277|consensus | 311 | 99.92 | ||
| KOG0296|consensus | 399 | 99.92 | ||
| KOG0289|consensus | 506 | 99.92 | ||
| KOG0973|consensus | 942 | 99.92 | ||
| KOG0305|consensus | 484 | 99.92 | ||
| KOG1407|consensus | 313 | 99.92 | ||
| KOG0640|consensus | 430 | 99.91 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.91 | |
| KOG0973|consensus | 942 | 99.91 | ||
| KOG0268|consensus | 433 | 99.91 | ||
| KOG0313|consensus | 423 | 99.91 | ||
| KOG0289|consensus | 506 | 99.91 | ||
| KOG0275|consensus | 508 | 99.91 | ||
| KOG0288|consensus | 459 | 99.91 | ||
| KOG0772|consensus | 641 | 99.91 | ||
| KOG0308|consensus | 735 | 99.91 | ||
| KOG0306|consensus | 888 | 99.91 | ||
| KOG0294|consensus | 362 | 99.9 | ||
| KOG0278|consensus | 334 | 99.9 | ||
| KOG0313|consensus | 423 | 99.9 | ||
| KOG1446|consensus | 311 | 99.9 | ||
| KOG0267|consensus | 825 | 99.9 | ||
| KOG2096|consensus | 420 | 99.9 | ||
| KOG0299|consensus | 479 | 99.9 | ||
| KOG0300|consensus | 481 | 99.89 | ||
| KOG0299|consensus | 479 | 99.89 | ||
| KOG0277|consensus | 311 | 99.89 | ||
| KOG0640|consensus | 430 | 99.89 | ||
| KOG0306|consensus | 888 | 99.89 | ||
| KOG0641|consensus | 350 | 99.89 | ||
| KOG0643|consensus | 327 | 99.89 | ||
| KOG0308|consensus | 735 | 99.89 | ||
| KOG0269|consensus | 839 | 99.88 | ||
| KOG0647|consensus | 347 | 99.88 | ||
| KOG0301|consensus | 745 | 99.88 | ||
| KOG4283|consensus | 397 | 99.88 | ||
| KOG1332|consensus | 299 | 99.88 | ||
| KOG1036|consensus | 323 | 99.88 | ||
| KOG0283|consensus | 712 | 99.87 | ||
| KOG0288|consensus | 459 | 99.87 | ||
| KOG0305|consensus | 484 | 99.87 | ||
| KOG1274|consensus | 933 | 99.87 | ||
| KOG0641|consensus | 350 | 99.87 | ||
| KOG0264|consensus | 422 | 99.86 | ||
| KOG0267|consensus | 825 | 99.86 | ||
| KOG0294|consensus | 362 | 99.86 | ||
| KOG4328|consensus | 498 | 99.85 | ||
| KOG0293|consensus | 519 | 99.85 | ||
| KOG1408|consensus | 1080 | 99.84 | ||
| KOG0264|consensus | 422 | 99.84 | ||
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 99.84 | |
| KOG1446|consensus | 311 | 99.83 | ||
| KOG2106|consensus | 626 | 99.83 | ||
| KOG1273|consensus | 405 | 99.83 | ||
| KOG0646|consensus | 476 | 99.83 | ||
| KOG1407|consensus | 313 | 99.82 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.82 | |
| KOG0269|consensus | 839 | 99.82 | ||
| KOG0321|consensus | 720 | 99.81 | ||
| KOG2048|consensus | 691 | 99.81 | ||
| KOG0639|consensus | 705 | 99.81 | ||
| KOG0302|consensus | 440 | 99.81 | ||
| KOG0302|consensus | 440 | 99.8 | ||
| KOG1332|consensus | 299 | 99.8 | ||
| KOG1539|consensus | 910 | 99.8 | ||
| KOG2055|consensus | 514 | 99.79 | ||
| KOG0646|consensus | 476 | 99.79 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.79 | |
| KOG0650|consensus | 733 | 99.79 | ||
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 99.78 | |
| KOG0647|consensus | 347 | 99.78 | ||
| KOG1539|consensus | 910 | 99.78 | ||
| KOG0639|consensus | 705 | 99.78 | ||
| KOG0268|consensus | 433 | 99.76 | ||
| KOG0772|consensus | 641 | 99.76 | ||
| KOG4283|consensus | 397 | 99.76 | ||
| KOG0649|consensus | 325 | 99.76 | ||
| KOG0270|consensus | 463 | 99.76 | ||
| KOG1034|consensus | 385 | 99.75 | ||
| KOG0321|consensus | 720 | 99.74 | ||
| KOG1009|consensus | 434 | 99.74 | ||
| KOG0270|consensus | 463 | 99.74 | ||
| KOG1063|consensus | 764 | 99.74 | ||
| KOG1034|consensus | 385 | 99.74 | ||
| KOG2445|consensus | 361 | 99.73 | ||
| KOG2106|consensus | 626 | 99.73 | ||
| KOG1408|consensus | 1080 | 99.71 | ||
| KOG0642|consensus | 577 | 99.71 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.7 | |
| KOG1188|consensus | 376 | 99.7 | ||
| KOG4378|consensus | 673 | 99.7 | ||
| KOG0303|consensus | 472 | 99.7 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.7 | |
| KOG1274|consensus | 933 | 99.7 | ||
| KOG4378|consensus | 673 | 99.7 | ||
| KOG1036|consensus | 323 | 99.7 | ||
| KOG2055|consensus | 514 | 99.7 | ||
| KOG0303|consensus | 472 | 99.7 | ||
| KOG0307|consensus | 1049 | 99.7 | ||
| KOG0644|consensus | 1113 | 99.68 | ||
| KOG4328|consensus | 498 | 99.68 | ||
| KOG1007|consensus | 370 | 99.67 | ||
| KOG1063|consensus | 764 | 99.66 | ||
| KOG1538|consensus | 1081 | 99.66 | ||
| KOG2048|consensus | 691 | 99.66 | ||
| KOG2919|consensus | 406 | 99.65 | ||
| KOG1188|consensus | 376 | 99.64 | ||
| KOG0649|consensus | 325 | 99.64 | ||
| KOG0307|consensus | 1049 | 99.63 | ||
| KOG1273|consensus | 405 | 99.62 | ||
| KOG1524|consensus | 737 | 99.62 | ||
| KOG1523|consensus | 361 | 99.61 | ||
| KOG4227|consensus | 609 | 99.59 | ||
| KOG2445|consensus | 361 | 99.58 | ||
| KOG1007|consensus | 370 | 99.57 | ||
| KOG1310|consensus | 758 | 99.57 | ||
| KOG2110|consensus | 391 | 99.57 | ||
| KOG1240|consensus | 1431 | 99.56 | ||
| KOG1538|consensus | 1081 | 99.56 | ||
| KOG2110|consensus | 391 | 99.56 | ||
| KOG0642|consensus | 577 | 99.55 | ||
| KOG2919|consensus | 406 | 99.55 | ||
| KOG0771|consensus | 398 | 99.54 | ||
| KOG0322|consensus | 323 | 99.53 | ||
| KOG1524|consensus | 737 | 99.53 | ||
| KOG1587|consensus | 555 | 99.52 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.52 | |
| KOG0650|consensus | 733 | 99.52 | ||
| KOG1009|consensus | 434 | 99.52 | ||
| KOG1517|consensus | 1387 | 99.52 | ||
| KOG1445|consensus | 1012 | 99.5 | ||
| KOG0644|consensus | 1113 | 99.5 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.48 | |
| KOG0290|consensus | 364 | 99.47 | ||
| KOG1445|consensus | 1012 | 99.46 | ||
| KOG2394|consensus | 636 | 99.46 | ||
| KOG0322|consensus | 323 | 99.46 | ||
| KOG2096|consensus | 420 | 99.46 | ||
| KOG1272|consensus | 545 | 99.45 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.45 | |
| KOG1587|consensus | 555 | 99.44 | ||
| KOG1334|consensus | 559 | 99.41 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.4 | |
| KOG2139|consensus | 445 | 99.39 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.39 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.38 | |
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.38 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.36 | |
| KOG2321|consensus | 703 | 99.36 | ||
| KOG0290|consensus | 364 | 99.35 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.34 | |
| KOG1963|consensus | 792 | 99.32 | ||
| KOG4497|consensus | 447 | 99.32 | ||
| KOG1963|consensus | 792 | 99.31 | ||
| KOG1523|consensus | 361 | 99.3 | ||
| KOG2111|consensus | 346 | 99.29 | ||
| KOG2394|consensus | 636 | 99.29 | ||
| KOG4497|consensus | 447 | 99.29 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.28 | |
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.27 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.27 | |
| KOG1310|consensus | 758 | 99.25 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.24 | |
| KOG2111|consensus | 346 | 99.23 | ||
| KOG1272|consensus | 545 | 99.2 | ||
| KOG1409|consensus | 404 | 99.2 | ||
| KOG3881|consensus | 412 | 99.19 | ||
| KOG0974|consensus | 967 | 99.19 | ||
| KOG4227|consensus | 609 | 99.18 | ||
| KOG0974|consensus | 967 | 99.17 | ||
| KOG4547|consensus | 541 | 99.17 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.15 | |
| KOG0771|consensus | 398 | 99.15 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.14 | |
| KOG1240|consensus | 1431 | 99.12 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.12 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.11 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.1 | |
| KOG1517|consensus | 1387 | 99.09 | ||
| KOG1064|consensus | 2439 | 99.07 | ||
| KOG4190|consensus | 1034 | 99.07 | ||
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.04 | |
| KOG3914|consensus | 390 | 99.03 | ||
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.03 | |
| KOG1832|consensus | 1516 | 99.03 | ||
| KOG0280|consensus | 339 | 99.0 | ||
| KOG3881|consensus | 412 | 98.99 | ||
| KOG1409|consensus | 404 | 98.96 | ||
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 98.96 | |
| KOG2041|consensus | 1189 | 98.94 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 98.94 | |
| KOG4547|consensus | 541 | 98.93 | ||
| KOG1334|consensus | 559 | 98.93 | ||
| KOG2321|consensus | 703 | 98.9 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 98.88 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 98.88 | |
| KOG1354|consensus | 433 | 98.86 | ||
| KOG2139|consensus | 445 | 98.83 | ||
| KOG0309|consensus | 1081 | 98.82 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 98.81 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 98.8 | |
| KOG1354|consensus | 433 | 98.79 | ||
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 98.79 | |
| KOG0309|consensus | 1081 | 98.77 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.76 | |
| KOG1064|consensus | 2439 | 98.75 | ||
| KOG2695|consensus | 425 | 98.74 | ||
| KOG2315|consensus | 566 | 98.73 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 98.69 | |
| KOG4714|consensus | 319 | 98.69 | ||
| KOG1912|consensus | 1062 | 98.68 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 98.65 | |
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 98.64 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.63 | |
| KOG0280|consensus | 339 | 98.63 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 98.62 | |
| KOG4190|consensus | 1034 | 98.62 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 98.58 | |
| KOG2114|consensus | 933 | 98.56 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 98.56 | |
| KOG2315|consensus | 566 | 98.56 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 98.56 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.53 | |
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.53 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.51 | |
| KOG2314|consensus | 698 | 98.5 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.5 | |
| KOG2066|consensus | 846 | 98.5 | ||
| KOG3914|consensus | 390 | 98.5 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.49 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 98.49 | |
| KOG2695|consensus | 425 | 98.46 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 98.4 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 98.39 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 98.37 | |
| KOG1275|consensus | 1118 | 98.34 | ||
| KOG3617|consensus | 1416 | 98.33 | ||
| KOG1912|consensus | 1062 | 98.33 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 98.32 | |
| KOG2314|consensus | 698 | 98.24 | ||
| KOG4714|consensus | 319 | 98.23 | ||
| KOG0882|consensus | 558 | 98.23 | ||
| KOG4532|consensus | 344 | 98.22 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 98.21 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.21 | |
| KOG4532|consensus | 344 | 98.21 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.2 | |
| KOG3621|consensus | 726 | 98.19 | ||
| KOG4649|consensus | 354 | 98.17 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 98.17 | |
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 98.15 | |
| KOG2041|consensus | 1189 | 98.13 | ||
| KOG2066|consensus | 846 | 98.13 | ||
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 98.13 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.09 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.03 | |
| KOG0882|consensus | 558 | 98.01 | ||
| KOG1275|consensus | 1118 | 97.99 | ||
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 97.95 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 97.93 | |
| KOG3617|consensus | 1416 | 97.88 | ||
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 97.87 | |
| KOG1920|consensus | 1265 | 97.84 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 97.83 | |
| KOG2114|consensus | 933 | 97.79 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 97.72 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 97.66 | |
| KOG1645|consensus | 463 | 97.55 | ||
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 97.54 | |
| KOG1832|consensus | 1516 | 97.52 | ||
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.38 | |
| KOG3621|consensus | 726 | 97.37 | ||
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 97.32 | |
| KOG1008|consensus | 783 | 97.31 | ||
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.31 | |
| KOG1920|consensus | 1265 | 97.3 | ||
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 97.19 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 97.12 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 97.09 | |
| KOG4640|consensus | 665 | 97.09 | ||
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 97.07 | |
| KOG1645|consensus | 463 | 96.99 | ||
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 96.93 | |
| KOG4640|consensus | 665 | 96.9 | ||
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 96.87 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 96.75 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 96.65 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 96.62 | |
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 96.61 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 96.58 | |
| KOG1008|consensus | 783 | 96.55 | ||
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 96.49 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 96.46 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 96.44 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 96.4 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 96.39 | |
| KOG4649|consensus | 354 | 96.38 | ||
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 96.37 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 96.36 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 96.32 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 96.25 | |
| KOG2079|consensus | 1206 | 96.22 | ||
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 96.21 | |
| KOG2079|consensus | 1206 | 96.19 | ||
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 96.18 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 96.12 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 96.12 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 96.02 | |
| KOG2444|consensus | 238 | 96.01 | ||
| KOG2395|consensus | 644 | 95.9 | ||
| KOG4499|consensus | 310 | 95.72 | ||
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 95.61 | |
| KOG2395|consensus | 644 | 95.59 | ||
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 95.35 | |
| KOG2444|consensus | 238 | 95.22 | ||
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 95.19 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 95.17 | |
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 94.99 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 94.96 | |
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 94.18 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 94.15 | |
| KOG1916|consensus | 1283 | 94.04 | ||
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 93.97 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 93.79 | |
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 93.63 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 93.56 | |
| KOG1916|consensus | 1283 | 93.27 | ||
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 93.08 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 92.97 | |
| PRK13684 | 334 | Ycf48-like protein; Provisional | 92.91 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 92.64 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 92.52 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 92.51 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 92.5 | |
| KOG4441|consensus | 571 | 91.5 | ||
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 91.12 | |
| PRK10115 | 686 | protease 2; Provisional | 90.73 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 90.36 | |
| PRK10115 | 686 | protease 2; Provisional | 90.27 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 90.24 | |
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 89.9 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 89.64 | |
| KOG4460|consensus | 741 | 89.61 | ||
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 89.58 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 89.46 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 89.43 | |
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 89.38 | |
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 89.13 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 89.11 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 89.08 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 89.06 | |
| KOG2247|consensus | 615 | 88.99 | ||
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 88.93 | |
| KOG2280|consensus | 829 | 88.89 | ||
| PLN00033 | 398 | photosystem II stability/assembly factor; Provisio | 88.88 | |
| KOG2280|consensus | 829 | 88.84 | ||
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 88.76 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 88.51 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 87.83 | |
| KOG4499|consensus | 310 | 87.65 | ||
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 87.4 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 87.38 | |
| KOG3630|consensus | 1405 | 87.32 | ||
| KOG1900|consensus | 1311 | 87.32 | ||
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 87.24 | |
| TIGR03118 | 336 | PEPCTERM_chp_1 conserved hypothetical protein TIGR | 87.18 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 86.77 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 86.51 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 86.24 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 85.05 | |
| KOG3630|consensus | 1405 | 84.97 | ||
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 84.96 | |
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 84.96 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 84.64 | |
| KOG1897|consensus | 1096 | 84.02 | ||
| PF13449 | 326 | Phytase-like: Esterase-like activity of phytase | 83.76 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 82.47 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 82.11 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 81.23 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 80.93 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 80.76 | |
| KOG2377|consensus | 657 | 80.69 | ||
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 80.65 |
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-100 Score=809.87 Aligned_cols=554 Identities=62% Similarity=1.064 Sum_probs=506.2
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
|+++|+..+++|++++|||..+|++++.++|.|++||++++.++.+|.+|++||++++|||++++|+|||
T Consensus 1 mltkfEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGG---------- 70 (1202)
T KOG0292|consen 1 MLTKFESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGG---------- 70 (1202)
T ss_pred CcchhhcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecC----------
Confidence 7899999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~ 160 (641)
+|.+|+||++++.++++++.||.++|+.+.||+..|||+|+|+|++|+||||++++|+..+.
T Consensus 71 ------------------DDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavlt 132 (1202)
T KOG0292|consen 71 ------------------DDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLT 132 (1202)
T ss_pred ------------------CccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC---------------C------ceee-------ecc
Q psy9327 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM---------------G------KLVL-------SMK 212 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~---------------~------~~v~-------s~~ 212 (641)
||+++|+|.+|||..+.++|||.|++|||||+.+.+.....++. + +.|+ ...
T Consensus 133 GHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwa 212 (1202)
T KOG0292|consen 133 GHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWA 212 (1202)
T ss_pred cCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceE
Confidence 99999999999999999999999999999999987776655540 0 0000 000
Q ss_pred cCCC-----------------------------------------------------------cee--------------
Q psy9327 213 SKHP-----------------------------------------------------------IWK-------------- 219 (641)
Q Consensus 213 ~~~~-----------------------------------------------------------v~~-------------- 219 (641)
++|| +|+
T Consensus 213 AfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrren 292 (1202)
T KOG0292|consen 213 AFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRREN 292 (1202)
T ss_pred EecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeeccC
Confidence 1111 111
Q ss_pred --------------------------------------------------------------------------------
Q psy9327 220 -------------------------------------------------------------------------------- 219 (641)
Q Consensus 220 -------------------------------------------------------------------------------- 219 (641)
T Consensus 293 dRFW~laahP~lNLfAAgHDsGm~VFkleRErpa~~v~~n~LfYvkd~~i~~~d~~t~~d~~v~~lr~~g~~~~~~~sms 372 (1202)
T KOG0292|consen 293 DRFWILAAHPELNLFAAGHDSGMIVFKLERERPAYAVNGNGLFYVKDRFIRSYDLRTQKDTAVASLRRPGTLWQPPRSLS 372 (1202)
T ss_pred CeEEEEEecCCcceeeeecCCceEEEEEcccCceEEEcCCEEEEEccceEEeeeccccccceeEeccCCCcccCCcceee
Confidence
Q ss_pred ---------eeee-------------------------------------------------------------------
Q psy9327 220 ---------YCKP------------------------------------------------------------------- 223 (641)
Q Consensus 220 ---------~~~~------------------------------------------------------------------- 223 (641)
+|..
T Consensus 373 YNpae~~vlics~~~n~~y~L~~ipk~~~~~~~~~~~~k~tG~~a~fvarNrfavl~k~~~~v~ik~l~N~vtkkl~~~~ 452 (1202)
T KOG0292|consen 373 YNPAENAVLICSNLDNGEYELVQIPKDSDGVSDGKDVKKGTGEGALFVARNRFAVLDKSNEQVVIKNLKNKVTKKLLLPE 452 (1202)
T ss_pred eccccCeEEEEeccCCCeEEEEEecCcccccCCchhhhcCCCCceEEEEecceEEEEecCcceEEecccchhhhcccCcc
Confidence 0000
Q ss_pred --------------------------------------------------eeeeCCCeeEEEecCCCcceeeecCCcceE
Q psy9327 224 --------------------------------------------------VKYCNPKHTLHICNRKMEPLCNIHENTRVK 253 (641)
Q Consensus 224 --------------------------------------------------l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~ 253 (641)
.++--++|+|.|++++++.++++++..+|.
T Consensus 453 ~~~~IF~ag~g~lll~~~~~v~lfdvQq~~~~~si~~s~vkyvvws~dm~~vAll~Kh~i~i~~kkL~l~~sihEtirik 532 (1202)
T KOG0292|consen 453 STDDIFYAGTGNLLLRSPDSVTLFDVQQKKKVGSIKVSKVKYVVWSNDMSRVALLSKHTITIADKKLELLCSIHETIRIK 532 (1202)
T ss_pred cccceeeccCccEEEEcCCeEEEEEeecceEEEEEecCceeEEEEcCccchhhhcccceEEEEecchhheecchheeEee
Confidence 001116899999999999999999999999
Q ss_pred EEEEcCCccEEEEecCCeEEEEEcCCCCeEeccccceEEEEEcCcEEEEEeCCCCeEEEEeCCcchhhhHHHhccchHHH
Q psy9327 254 SGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEV 333 (641)
Q Consensus 254 sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~p~~~~~~~g~~v~~~~~dg~i~v~~~~~~~~~~k~~l~~~~~~~~ 333 (641)
+.+|+.+|.+|++++++.+|.+-+|+.|.|+++|.|+|+++..|+.++|+++|+.+.+..+|+.+|+||+++.+++|+++
T Consensus 533 sgawde~gVfiYtT~nHikYal~~GD~GIikTLd~~iyitkv~gn~V~cl~rd~~~~~~~IDptEy~FKlALi~k~ydeV 612 (1202)
T KOG0292|consen 533 SGAWDEDGVFIYTTLNHIKYALENGDSGIIKTLDKPIYITKVKGNKVFCLNRDGEIECLTIDPTEYRFKLALLNKKYDEV 612 (1202)
T ss_pred eceeccCceEEEEehhhhhhhhccCCcceEEecccceEEEEeeCCEEEEEecCCCeEEEeechHHHHHHHHHHhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCcccc---------------------------------------------------------------------
Q psy9327 334 LHIVRNSRLVG--------------------------------------------------------------------- 344 (641)
Q Consensus 334 l~~~~~s~l~~--------------------------------------------------------------------- 344 (641)
++|+++++|+|
T Consensus 613 l~lI~ns~LvGqaiIaYLqKkgypeiAL~FVkD~~tRF~LaLe~gnle~ale~akkldd~d~w~rLge~Al~qgn~~IaE 692 (1202)
T KOG0292|consen 613 LHLIKNSNLVGQAIIAYLQKKGYPEIALHFVKDERTRFELALECGNLEVALEAAKKLDDKDVWERLGEEALRQGNHQIAE 692 (1202)
T ss_pred HHHHHhcCcccHHHHHHHHhcCCcceeeeeecCcchheeeehhcCCHHHHHHHHHhcCcHHHHHHHHHHHHHhcchHHHH
Confidence 99999999999
Q ss_pred -------------------------------------------------chHHHHHHHHhcCCccchhhhhhhcCCcHHH
Q psy9327 345 -------------------------------------------------EVGERIKILKSCGQTSLAYLTAATHGLSEEA 375 (641)
Q Consensus 345 -------------------------------------------------D~~~r~~~l~~~g~~~la~~~a~~~~~~~~~ 375 (641)
|+++|++|++++|++|+||++|++||+++.|
T Consensus 693 m~yQ~~knfekLsfLYliTgn~eKL~Km~~iae~r~D~~~~~qnalYl~dv~ervkIl~n~g~~~laylta~~~G~~~~a 772 (1202)
T KOG0292|consen 693 MCYQRTKNFEKLSFLYLITGNLEKLSKMMKIAEIRNDATGQFQNALYLGDVKERVKILENGGQLPLAYLTAAAHGLEDQA 772 (1202)
T ss_pred HHHHHhhhhhheeEEEEEeCCHHHHHHHHHHHHhhhhhHHHHHHHHHhccHHHHHHHHHhcCcccHHHHHHhhcCcHHHH
Confidence 9999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCccCCCCCCCccccCCccccccCCCccceeecccccC------------------------------
Q psy9327 376 AELESNLRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPLLTVSKSFFE------------------------------ 425 (641)
Q Consensus 376 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------ 425 (641)
+++.+..+.+. .+||...+++.+++||.|+.+.+ ||||+.+++++|+
T Consensus 773 e~l~ee~~~~~--~~lP~~~~~a~ll~pP~p~~~l~-nwPLl~~s~~~fe~~~~~~~~~~av~~~~e~~~g~e~~~~e~~ 849 (1202)
T KOG0292|consen 773 EKLGEELEKQV--PSLPEVDPNASLLQPPVPIMPLE-NWPLLSVSKGTFEGALLSRSSSLAVDRDDEGDWGEEGWDVELM 849 (1202)
T ss_pred HHHHHhhcccc--CCCCCCCCcccccCCCCcccccc-CCchhhhhhhhhhHhhhhhcccCcccccccccccccchhhhhc
Confidence 99999988643 36998878889999999987665 9999999999996
Q ss_pred ----------------------------------------------------------------------CcHHHHHHHH
Q psy9327 426 ----------------------------------------------------------------------GSFETAFKLL 435 (641)
Q Consensus 426 ----------------------------------------------------------------------g~~~~~~~~~ 435 (641)
|+|++||++|
T Consensus 850 l~ed~~~~~d~~g~~~~dE~~gWdv~d~~l~pe~~~~~~~~~~~~~~p~~~~~~~~W~~nS~L~adhvaAGsf~tA~~lL 929 (1202)
T KOG0292|consen 850 LGEDGILFNDGAGEVGEDEGGGWDVGDLDLPPEEDTPKGADDGEFVVPAQGMSVSIWSNNSPLAADHVAAGSFETAMRLL 929 (1202)
T ss_pred cccccccccccccccCcccccCcCcccccCCccccccccccccceecCCCCCcchhccccCcchhhhhhcCchHHHHHHH
Confidence 8999999999
Q ss_pred HhhcceeecCcchHHHHHHhhcCceeecCCCCCCceeeccCCC--CCCCCCCCCCcccccHHHHHHHHHhhhhhcccccH
Q psy9327 436 HDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTRK--GPGIKENSHPATNIKLEQLIAKIQQCYQLTTSGKF 513 (641)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (641)
++|+|+++|.|+|++|.+.|..+|+++++.|+.| ..++|-|+ +... ....|+++++++|+..++++||+++|.|||
T Consensus 930 ~dqvgvv~f~p~Kt~fl~iy~~sR~~l~~~~~~~-~~~~~~R~~se~~~-~~~~P~v~~~l~~l~~kl~~gy~ltt~gKf 1007 (1202)
T KOG0292|consen 930 HDQVGVVNFGPLKTHFLKIYAGSRTYLRATPCLP-VSLYPVRNWSETSS-KQGLPAVGFKLSQLNKKLQKGYKLTTEGKF 1007 (1202)
T ss_pred HhhhcceecccHHhhhhhhccccceeccCCCCcc-cccccccccccchh-hccCCcccccHHHHHHHHHHHHhhhccCcH
Confidence 9999999999999999999999999999999988 66677776 4444 578999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcceeeecCHHHHHHHHHHHHHHhHHHHHHHHHH--HhhcCCCcccccccccceeeeeeCcceeEE
Q psy9327 514 VDAIEKLRNVLISIPLLVVTTKKEIEEAKQIINICKEYIVGTNHIK--YAIVNGDHGIIRTLDLPIYITKIKGNQVYY 589 (641)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~--~~l~~~d~~~~r~le~~~y~t~~~~~~~~~ 589 (641)
.+|+++||.+|+++|+++|++.+|++++++++.||+|||+|+.+|+ +.|+. ....|.|||++|||||++|++|-
T Consensus 1008 ~eAie~Frsii~~i~l~vvd~~~e~aea~~li~i~~eYi~gL~~E~~Rr~l~~--~~~~~~~ElAaYFt~~~Lqp~H~ 1083 (1202)
T KOG0292|consen 1008 GEAIEKFRSIIYSIPLLVVDSKEEEAEADELIKICREYIVGLSVELERRKLKK--PNLEQQLELAAYFTHCKLQPMHR 1083 (1202)
T ss_pred HHHHHHHHHHHhheeEEEecchhhHHHHHHHHHHHHHHHhhheeeeeecccCC--chHHHHHHHHHHhhcCCCCcHHH
Confidence 9999999999999999999999999999999999999999999998 55644 45578899999999999999884
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-96 Score=784.80 Aligned_cols=542 Identities=27% Similarity=0.387 Sum_probs=464.0
Q ss_pred ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC
Q psy9327 43 LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD 122 (641)
Q Consensus 43 ~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~ 122 (641)
++.+|+..+.+|.+++|||..+|++++- ++|.|++||++++.++..|.+|++
T Consensus 1 mltkfEskSsRvKglsFHP~rPwILtsl----------------------------HsG~IQlWDYRM~tli~rFdeHdG 52 (1202)
T KOG0292|consen 1 MLTKFESKSSRVKGLSFHPKRPWILTSL----------------------------HSGVIQLWDYRMGTLIDRFDEHDG 52 (1202)
T ss_pred CcchhhcccccccceecCCCCCEEEEee----------------------------cCceeeeehhhhhhHHhhhhccCC
Confidence 3567889999999999999999999997 999999999999999999999999
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 123 ~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
+|++++|||++++|+|||+|.+|+||++++++|++++.||.++|+++.||++.+||+|+|+|+|||||+|++++++..++
T Consensus 53 pVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavlt 132 (1202)
T KOG0292|consen 53 PVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLT 132 (1202)
T ss_pred ccceeeecCCCCeEEecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcc------e-----------------------eee--cCCcc
Q psy9327 203 GMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEP------L-----------------------CNI--HENTR 251 (641)
Q Consensus 203 ~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~------~-----------------------~~~--~~~~~ 251 (641)
||+++||| +++||.-+. +++++-|.+|++||.++-. - +.+ .|+..
T Consensus 133 GHnHYVMc-AqFhptEDl---IVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRG 208 (1202)
T KOG0292|consen 133 GHNHYVMC-AQFHPTEDL---IVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRG 208 (1202)
T ss_pred cCceEEEe-eccCCccce---EEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccc
Confidence 99999999 788886554 6778899999999932110 0 000 13566
Q ss_pred eEEEEEcCCccEEEEecCCe----------------------------------EEEEEcCCCCeEeccccc----eEEE
Q psy9327 252 VKSGAWDESGVFIYTTSNHI----------------------------------KYAIVNGDHGIIRTLDLP----IYIT 293 (641)
Q Consensus 252 I~sla~~p~g~~L~t~s~~~----------------------------------k~~l~~~~~g~I~~~d~p----~~~~ 293 (641)
|+-++|+|.-..+++|+.|. .+++.++++++||+||+. +..+
T Consensus 209 VNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tf 288 (1202)
T KOG0292|consen 209 VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTF 288 (1202)
T ss_pred cceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeee
Confidence 88889999888888887643 344567778888888764 4445
Q ss_pred EEcCcEEEEEe--CCCCeEEEEeCCcchhhhHHHhccch---HHHHHHHhcCccccchHHHHHHHHhcCCccchhhhhhh
Q psy9327 294 KIKGNQVYYLD--RECSPHVLRIDPTEFKFKLALINHKY---EEVLHIVRNSRLVGEVGERIKILKSCGQTSLAYLTAAT 368 (641)
Q Consensus 294 ~~~g~~v~~~~--~dg~i~v~~~~~~~~~~k~~l~~~~~---~~~l~~~~~s~l~~D~~~r~~~l~~~g~~~la~~~a~~ 368 (641)
+.+.+++|++. +...+.....|++..+||++.+++.| +..+.+++++.+ |...|.. +.+++++..+.
T Consensus 289 rrendRFW~laahP~lNLfAAgHDsGm~VFkleRErpa~~v~~n~LfYvkd~~i------~~~d~~t--~~d~~v~~lr~ 360 (1202)
T KOG0292|consen 289 RRENDRFWILAAHPELNLFAAGHDSGMIVFKLERERPAYAVNGNGLFYVKDRFI------RSYDLRT--QKDTAVASLRR 360 (1202)
T ss_pred eccCCeEEEEEecCCcceeeeecCCceEEEEEcccCceEEEcCCEEEEEccceE------Eeeeccc--cccceeEeccC
Confidence 55555555544 44566666666666777777777665 234445554433 1122222 45777777777
Q ss_pred cCCcHHHHHHHhhcCCCCCCCccCCCCCCCccccCCccccccCCCccceeecccccCCcHH--------HHHHHHHhhcc
Q psy9327 369 HGLSEEAAELESNLRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPLLTVSKSFFEGSFE--------TAFKLLHDQIG 440 (641)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--------~~~~~~~~~~~ 440 (641)
.|. .+.++++|+|||.++.++.... .+++.|.|+.+++. ++|.-+ +-.++|.+++|
T Consensus 361 ~g~------------~~~~~~smsYNpae~~vlics~---~~n~~y~L~~ipk~-~~~~~~~~~~~k~tG~~a~fvarNr 424 (1202)
T KOG0292|consen 361 PGT------------LWQPPRSLSYNPAENAVLICSN---LDNGEYELVQIPKD-SDGVSDGKDVKKGTGEGALFVARNR 424 (1202)
T ss_pred CCc------------ccCCcceeeeccccCeEEEEec---cCCCeEEEEEecCc-ccccCCchhhhcCCCCceEEEEecc
Confidence 775 5668899999999998887764 37789999999987 555444 23478999999
Q ss_pred eeecCc-chHHHHHHhhcCceeecCCCCCCceeeccCCCCCCCCCCCCCcccccHHH------HHHHHHhhhhhcccccH
Q psy9327 441 VKNFLP-YRQMFLNSYLQSRTAYSTLPLLAPVMAFPTRKGPGIKENSHPATNIKLEQ------LIAKIQQCYQLTTSGKF 513 (641)
Q Consensus 441 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 513 (641)
+++++. ..+..++.+.++.++...+|. +...+|++|+|..+++++..+++||+|| +....++|+.|+.++++
T Consensus 425 favl~k~~~~v~ik~l~N~vtkkl~~~~-~~~~IF~ag~g~lll~~~~~v~lfdvQq~~~~~si~~s~vkyvvws~dm~~ 503 (1202)
T KOG0292|consen 425 FAVLDKSNEQVVIKNLKNKVTKKLLLPE-STDDIFYAGTGNLLLRSPDSVTLFDVQQKKKVGSIKVSKVKYVVWSNDMSR 503 (1202)
T ss_pred eEEEEecCcceEEecccchhhhcccCcc-cccceeeccCccEEEEcCCeEEEEEeecceEEEEEecCceeEEEEcCccch
Confidence 999998 779999999999999999985 8899999999999999999999999999 55578889999999999
Q ss_pred HHHHHHHHHHhhhcceeeecCHHHHHHHHHHHHHHhHHHHHH--HHHHHhhcCCCcccccccccceeeeeeCcceeEEee
Q psy9327 514 VDAIEKLRNVLISIPLLVVTTKKEIEEAKQIINICKEYIVGT--NHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLD 591 (641)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~--~~~~~~l~~~d~~~~r~le~~~y~t~~~~~~~~~~~ 591 (641)
++.++||.++|.+..|..+++.||++|+|+.+|+..++++|+ ||+||+|.|||+|||||||+|+|+|+++|++|||||
T Consensus 504 vAll~Kh~i~i~~kkL~l~~sihEtiriksgawde~gVfiYtT~nHikYal~~GD~GIikTLd~~iyitkv~gn~V~cl~ 583 (1202)
T KOG0292|consen 504 VALLSKHTITIADKKLELLCSIHETIRIKSGAWDEDGVFIYTTLNHIKYALENGDSGIIKTLDKPIYITKVKGNKVFCLN 583 (1202)
T ss_pred hhhcccceEEEEecchhheecchheeEeeeceeccCceEEEEehhhhhhhhccCCcceEEecccceEEEEeeCCEEEEEe
Confidence 999999999999999999999999999999999999987776 999999999999999999999999999999999999
Q ss_pred CCCCceEEEeCCcchhhhHHHhccChhHHHHhhhcCccchhhhHhhhhcC
Q psy9327 592 RECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIAYLQQK 641 (641)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (641)
|||+|++++||||||+|||||+||+|||||||||||+|||||||||||||
T Consensus 584 rd~~~~~~~IDptEy~FKlALi~k~ydeVl~lI~ns~LvGqaiIaYLqKk 633 (1202)
T KOG0292|consen 584 RDGEIECLTIDPTEYRFKLALLNKKYDEVLHLIKNSNLVGQAIIAYLQKK 633 (1202)
T ss_pred cCCCeEEEeechHHHHHHHHHHhhhhHHHHHHHHhcCcccHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999997
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=314.87 Aligned_cols=292 Identities=19% Similarity=0.329 Sum_probs=250.3
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
..+.||.++|.|+.|+|+|..|++|+.|.++++||..+..++.+.++|...|.|++|+|||.+|++|+
T Consensus 109 sS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~------------ 176 (480)
T KOG0271|consen 109 SSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGS------------ 176 (480)
T ss_pred cccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccc------------
Confidence 46889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeE-EEEccCCCCeEEEEEcc-----CCCEEEEEeCCCeEEEEECCCCeeE
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCI-FTLLGHLDYIRTTFFHH-----EYPWILSASDDQTIRIWYWQSRNCI 156 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~-~~~~~h~~~V~~v~fsp-----~~~~l~sgs~Dg~I~vWd~~~~~~i 156 (641)
.||+|++||.++|+++ ..+.+|...|.+++|.| ..+.++|+|.||+|+|||+..++|+
T Consensus 177 ----------------~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~ 240 (480)
T KOG0271|consen 177 ----------------KDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCV 240 (480)
T ss_pred ----------------cCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEE
Confidence 9999999999998764 67999999999999987 5669999999999999999999999
Q ss_pred EEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccC----------CCceee------
Q psy9327 157 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSK----------HPIWKY------ 220 (641)
Q Consensus 157 ~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~----------~~v~~~------ 220 (641)
..+.||+.+|+|+.|-- ..+++|||.|++|++|+...+.+...+.||.+.|..++-. +|.-..
T Consensus 241 ~~lsgHT~~VTCvrwGG-~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se 319 (480)
T KOG0271|consen 241 RTLSGHTASVTCVRWGG-EGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSE 319 (480)
T ss_pred EEeccCccceEEEEEcC-CceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHH
Confidence 99999999999999963 3589999999999999999999999999998888754422 221110
Q ss_pred ----------------eeeeeeeCCCeeEEEec--CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCC
Q psy9327 221 ----------------CKPVKYCNPKHTLHICN--RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG 281 (641)
Q Consensus 221 ----------------~~~l~s~~~d~~I~i~d--~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g 281 (641)
.-.+.+|+.|.++.+|+ ...+++.... |..-|+.+.|+||+.+++++|-|..+.+|++.+|
T Consensus 320 ~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tG 399 (480)
T KOG0271|consen 320 EQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTG 399 (480)
T ss_pred HHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCc
Confidence 01278999999999999 3344554444 4778999999999999999999999999999998
Q ss_pred eE-eccc---cceEE--EEEcCcEEEEEeCCCCeEEEEeCCcchhhhH
Q psy9327 282 II-RTLD---LPIYI--TKIKGNQVYYLDRECSPHVLRIDPTEFKFKL 323 (641)
Q Consensus 282 ~I-~~~d---~p~~~--~~~~g~~v~~~~~dg~i~v~~~~~~~~~~k~ 323 (641)
.- .++. .++|. +..+...+++++.|.++++|++.+.+..+.+
T Consensus 400 k~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DL 447 (480)
T KOG0271|consen 400 KFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDL 447 (480)
T ss_pred chhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccC
Confidence 52 2332 34554 4566779999999999999999876655443
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=303.24 Aligned_cols=246 Identities=21% Similarity=0.338 Sum_probs=224.2
Q ss_pred CceeeccCCCCeEEEEEccC--CCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeee
Q psy9327 1 MLTKFETKSARVKGLSFHPK--RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspd--g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~ 78 (641)
++.+|.||.+.|.++.|||. +.-+|+|+.||++++|++.+..++..+.+|..+|..++|||+|.+|++++
T Consensus 209 ~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~Tas-------- 280 (459)
T KOG0272|consen 209 LLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTAS-------- 280 (459)
T ss_pred eeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecc--------
Confidence 36789999999999999996 56899999999999999999899999999999999999999999999998
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
.|.+-++||++++..+...+||..+|.+++|+|||.+++|||.|..-+|||+++++|+..
T Consensus 281 --------------------fD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~ 340 (459)
T KOG0272|consen 281 --------------------FDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMF 340 (459)
T ss_pred --------------------cccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN- 237 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d- 237 (641)
|.||...|.++.|+|+|..++|||.|++++|||++..+...++++|...|..+... | ....-+++++.|+++++|.
T Consensus 341 L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~-p--~~g~fL~TasyD~t~kiWs~ 417 (459)
T KOG0272|consen 341 LAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYS-P--QEGYFLVTASYDNTVKIWST 417 (459)
T ss_pred ecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEec-c--cCCeEEEEcccCcceeeecC
Confidence 99999999999999999999999999999999999999999999987666543322 1 0111278999999999999
Q ss_pred CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 238 RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 238 ~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
....++.++. |...|.++..++++.+++|++-|..+.+|.
T Consensus 418 ~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 418 RTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred CCcccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 6667777775 488999999999999999999988888885
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-36 Score=298.72 Aligned_cols=275 Identities=20% Similarity=0.299 Sum_probs=240.7
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCC--CCEEEEeceeeEEeeeceeeec
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ--QPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~--~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
+-+.+|..+.|++|++.|++|+.+|.+++|+..+...+.+|.+|.+.|.++.|||. +..+++++
T Consensus 173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s-------------- 238 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATAS-------------- 238 (459)
T ss_pred cCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeec--------------
Confidence 45689999999999999999999999999999999999999999999999999997 56888987
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCC
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNH 164 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~ 164 (641)
.||++++|++.+.+++..+.+|...|..++|||+|++|+|+|.|.+-++||+.++..+....||..
T Consensus 239 --------------~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~ 304 (459)
T KOG0272|consen 239 --------------ADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSK 304 (459)
T ss_pred --------------cCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhccccc
Confidence 999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred CEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcce
Q psy9327 165 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPL 243 (641)
Q Consensus 165 ~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~ 243 (641)
.|.+++|+|||.+++||+.|..-||||+++++++-.+.+|.+.|.++.....- ..+++|++|++++||| +....+
T Consensus 305 ~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNG----y~lATgs~Dnt~kVWDLR~r~~l 380 (459)
T KOG0272|consen 305 GVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNG----YHLATGSSDNTCKVWDLRMRSEL 380 (459)
T ss_pred ccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCc----eEEeecCCCCcEEEeeecccccc
Confidence 99999999999999999999999999999999999999998888876533221 2288999999999999 344445
Q ss_pred eeec-CCcceEEEEEcC-CccEEEEecCCeEEEEEcCCCCe-Eecc---ccceEE--EEEcCcEEEEEeCCCCeEEEE
Q psy9327 244 CNIH-ENTRVKSGAWDE-SGVFIYTTSNHIKYAIVNGDHGI-IRTL---DLPIYI--TKIKGNQVYYLDRECSPHVLR 313 (641)
Q Consensus 244 ~~~~-~~~~I~sla~~p-~g~~L~t~s~~~k~~l~~~~~g~-I~~~---d~p~~~--~~~~g~~v~~~~~dg~i~v~~ 313 (641)
..++ |..-|..+.|+| .|.+|+|++.|..+.+|.+.+.. ++++ +.-+.. ...++..+.+.+.|.+++.|.
T Consensus 381 y~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 381 YTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred eecccccchhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 5555 477889999998 69999999999999999876643 3333 111111 235678899999999999995
|
|
| >PF06957 COPI_C: Coatomer (COPI) alpha subunit C-terminus; InterPro: IPR010714 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=314.37 Aligned_cols=165 Identities=39% Similarity=0.631 Sum_probs=135.8
Q ss_pred CCcHHHHHHHHHhhcceeecCcchHHHHHHhhcCceeecCCCCCCceeeccCCC-CCCCCCCCCCcccccHHHHHHHHHh
Q psy9327 425 EGSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTRK-GPGIKENSHPATNIKLEQLIAKIQQ 503 (641)
Q Consensus 425 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (641)
+|+||+||+||++|+|++||+|+|++|++.|.+++++++++|++|++.+++.|| .....++.+|++++++++|.++++.
T Consensus 131 AGsFetAm~LLnrQiGivnF~PLk~~Fl~~y~~s~~~l~~~~~~p~l~~~~~r~~~~~~~~~~lP~i~~~l~~L~~~Lk~ 210 (422)
T PF06957_consen 131 AGSFETAMQLLNRQIGIVNFEPLKPLFLEVYQASRTYLPALPSLPPLPSYIRRNWDESNPKNGLPAIPLSLSSLEERLKE 210 (422)
T ss_dssp CT-HHHHHHHHHHHC-B---GGGHHHHHHHHCCTEEEE-SSTTTS-EEEEEBCTTTTSSSCCG-BB----HHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHhCccccHHHHHHHHHHHHhhceecccCCCCCCccccccCCccccccccCCCcCcCCHHHHHHHHHH
Confidence 499999999999999999999999999999999999999999999999999999 5555567899999999999999999
Q ss_pred hhhhcccccHHHHHHHHHHHhhhcceeeecCHHHHHHHHHHHHHHhHHHHHHHHHH--HhhcCCC-cccccccccceeee
Q psy9327 504 CYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQIINICKEYIVGTNHIK--YAIVNGD-HGIIRTLDLPIYIT 580 (641)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~--~~l~~~d-~~~~r~le~~~y~t 580 (641)
||+++|.|||.+|+..||.|||++||++|++.+|+.++|++|.+||||++||++|+ +.|+..+ .+++|+|||++|||
T Consensus 211 gyk~~t~gKF~eA~~~Fr~iL~~i~l~vv~~~~E~~e~~eli~icrEYilgl~iEl~Rr~l~~~~~~~~kR~lELAAYFT 290 (422)
T PF06957_consen 211 GYKLFTAGKFEEAIEIFRSILHSIPLLVVESREEEDEAKELIEICREYILGLSIELERRELPKDPVEDQKRNLELAAYFT 290 (422)
T ss_dssp HHHHHHTT-HHHHHHHHHHHHHHHHC--BSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCTS-TTTHHHHHHHHHHHHHHC
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHhheeeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999998 4464322 36799999999999
Q ss_pred eeCcceeEE
Q psy9327 581 KIKGNQVYY 589 (641)
Q Consensus 581 ~~~~~~~~~ 589 (641)
||++|++|-
T Consensus 291 hc~LQp~H~ 299 (422)
T PF06957_consen 291 HCKLQPSHL 299 (422)
T ss_dssp CS---HHHH
T ss_pred cCCCcHHHH
Confidence 999999984
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the C terminus (approximately 500 residues) of the eukaryotic coatomer alpha subunit [, ]. This domain is found along with the IPR006692 from INTERPRO domain. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0005515 protein binding, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030126 COPI vesicle coat; PDB: 3MKR_B 3MV2_E 3MKQ_B 3MV3_A. |
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-34 Score=295.15 Aligned_cols=289 Identities=29% Similarity=0.488 Sum_probs=243.9
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
++|..|+++|+++.|||..+|++++..+|.|.|||+++..+++.|+-.+.||++..|-+..+|+++|+
T Consensus 7 rk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~Gs------------ 74 (794)
T KOG0276|consen 7 RKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGS------------ 74 (794)
T ss_pred hHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEec------------
Confidence 56788999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC-eeEEEEcc
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICVLTG 161 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~-~~i~~l~~ 161 (641)
+|..|+||++++++.+.+|+.|.++|++++.||+.|+++|+|+|-+|++||++.. .|.++|.|
T Consensus 75 ----------------DD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeG 138 (794)
T KOG0276|consen 75 ----------------DDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEG 138 (794)
T ss_pred ----------------CCceEEEEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcC
Confidence 9999999999999999999999999999999999999999999999999999864 68899999
Q ss_pred CCCCEEEEEEecC-CCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CC
Q psy9327 162 HNHYVMCAQFHPT-DDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RK 239 (641)
Q Consensus 162 h~~~V~sl~fsp~-g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~ 239 (641)
|.++|++++|+|. .+.++|+|.|+||+||.+.+..+..++.+|.+.|.|+...+.--+. -+.+|+.|+++++|| .+
T Consensus 139 H~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkp--ylIsgaDD~tiKvWDyQt 216 (794)
T KOG0276|consen 139 HEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKP--YLISGADDLTIKVWDYQT 216 (794)
T ss_pred cceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcc--eEEecCCCceEEEeecch
Confidence 9999999999994 5799999999999999999999999999998888776543321111 167889999999999 56
Q ss_pred Ccceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE-eccccceEEEEEcCcEEEEEe--CCCCeEEEEeC
Q psy9327 240 MEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII-RTLDLPIYITKIKGNQVYYLD--RECSPHVLRID 315 (641)
Q Consensus 240 ~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I-~~~d~p~~~~~~~g~~v~~~~--~dg~i~v~~~~ 315 (641)
..++.++. |...|..+.|+|.-..+++|++||.+.||+..+-.+ .++.. ...++||.. +.+...+...|
T Consensus 217 k~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~-------gleRvW~I~~~k~~~~i~vG~D 289 (794)
T KOG0276|consen 217 KSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNY-------GLERVWCIAAHKGDGKIAVGFD 289 (794)
T ss_pred HHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcceehhhhhhc-------CCceEEEEeecCCCCeEEEecc
Confidence 67777776 578999999999999999999999999998654322 12222 345555554 33333445555
Q ss_pred CcchhhhHHHhcc
Q psy9327 316 PTEFKFKLALINH 328 (641)
Q Consensus 316 ~~~~~~k~~l~~~ 328 (641)
++...+++...++
T Consensus 290 eg~i~v~lgreeP 302 (794)
T KOG0276|consen 290 EGSVTVKLGREEP 302 (794)
T ss_pred CCcEEEEccCCCC
Confidence 5555555554444
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-32 Score=257.34 Aligned_cols=280 Identities=17% Similarity=0.298 Sum_probs=238.1
Q ss_pred ceeeccCCCCeEEEEEccC-CCeEEEEeCCCcEEEEECc-----cCcccccccccccCeEEEEEeCCCCEEEEeceeeEE
Q psy9327 2 LTKFETKSARVKGLSFHPK-RPWILSSLHNGVIQLWDYR-----MNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM 75 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspd-g~~Lasg~~dg~I~iWD~~-----~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~ 75 (641)
..++++|++.|+.++..+. .+.+++++.|.++.+|++. .|..++.|.+|+..|..++.++++.+.++++
T Consensus 8 ~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~s----- 82 (315)
T KOG0279|consen 8 RGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSAS----- 82 (315)
T ss_pred eeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEecc-----
Confidence 4578999999999999997 4578899999999999974 4667899999999999999999999999998
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
.|+++++||+.+|+..+.|.+|...|.+++|+++.+.++|||.|.+|++||.. +.|
T Consensus 83 -----------------------wD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~-g~c 138 (315)
T KOG0279|consen 83 -----------------------WDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTL-GVC 138 (315)
T ss_pred -----------------------ccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeec-ccE
Confidence 99999999999999999999999999999999999999999999999999976 445
Q ss_pred EEEEccC--CCCEEEEEEecC--CCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCe
Q psy9327 156 ICVLTGH--NHYVMCAQFHPT--DDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKH 231 (641)
Q Consensus 156 i~~l~~h--~~~V~sl~fsp~--g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~ 231 (641)
..+...+ .+.|.|+.|+|+ ...|+++|.|++|++||+++.+....+.+|.+++..+... |--.. .++|+.|+
T Consensus 139 k~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vS-pDGsl---casGgkdg 214 (315)
T KOG0279|consen 139 KYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVS-PDGSL---CASGGKDG 214 (315)
T ss_pred EEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEEC-CCCCE---EecCCCCc
Confidence 5555443 789999999997 7899999999999999999999999999998888764322 11111 45788999
Q ss_pred eEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe-cccc-----------c---eEEEEE
Q psy9327 232 TLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR-TLDL-----------P---IYITKI 295 (641)
Q Consensus 232 ~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~-~~d~-----------p---~~~~~~ 295 (641)
.+.+|| ...+.+..+.+...|.+++|+|+.-+|+.+.... +.||+.+++.+- .+.. | .-++..
T Consensus 215 ~~~LwdL~~~k~lysl~a~~~v~sl~fspnrywL~~at~~s-IkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~ 293 (315)
T KOG0279|consen 215 EAMLWDLNEGKNLYSLEAFDIVNSLCFSPNRYWLCAATATS-IKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSA 293 (315)
T ss_pred eEEEEEccCCceeEeccCCCeEeeEEecCCceeEeeccCCc-eEEEeccchhhhhhccccccccccccCCcEEEEEEEcC
Confidence 999999 6678899999999999999999987777665444 888988876532 2211 1 223667
Q ss_pred cCcEEEEEeCCCCeEEEEeC
Q psy9327 296 KGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 296 ~g~~v~~~~~dg~i~v~~~~ 315 (641)
+|..++++..|+.+++|.+.
T Consensus 294 dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 294 DGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred CCcEEEeeecCCcEEEEEee
Confidence 89999999999999999864
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-33 Score=274.03 Aligned_cols=278 Identities=21% Similarity=0.309 Sum_probs=237.0
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccc-ccccccccCeEEEEEeC-----CCCEEEEeceeeEE
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLL-EKFDEHEGPVRGICFHN-----QQPIFVSGGKMIVM 75 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l-~~~~~h~~~V~~i~fsp-----~~~~l~sgs~~~~~ 75 (641)
+.+.++|...|.|++|+|||..||+|+.||+|++||..+|+++ +.+.+|...|++++|.| ..++|++++
T Consensus 150 ~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~s----- 224 (480)
T KOG0271|consen 150 LFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSS----- 224 (480)
T ss_pred ceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceeccc-----
Confidence 3578999999999999999999999999999999999888764 66889999999999975 566888887
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
.||.|+|||...++++..+.+|+.+|+|+.|--+| ++.|||.|++|++|+...|.+
T Consensus 225 -----------------------kDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~g-liySgS~DrtIkvw~a~dG~~ 280 (480)
T KOG0271|consen 225 -----------------------KDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEG-LIYSGSQDRTIKVWRALDGKL 280 (480)
T ss_pred -----------------------CCCCEEEEEccCceEEEEeccCccceEEEEEcCCc-eEEecCCCceEEEEEccchhH
Confidence 99999999999999999999999999999997665 799999999999999999999
Q ss_pred EEEEccCCCCEEEEEEe-----------cCCC-------------------------EEEEEeCCCeEEEEecCCC-cee
Q psy9327 156 ICVLTGHNHYVMCAQFH-----------PTDD-------------------------IVVSASLDQTIRVWDISGL-RKK 198 (641)
Q Consensus 156 i~~l~~h~~~V~sl~fs-----------p~g~-------------------------~lvSgs~DgtI~IWD~~~~-~~~ 198 (641)
+..++||.+.|+.++.+ |.++ .++|||+|.++.+|+-... +++
T Consensus 281 ~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi 360 (480)
T KOG0271|consen 281 CRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPI 360 (480)
T ss_pred HHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccch
Confidence 99999999999998776 3333 4999999999999997654 466
Q ss_pred eeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEE
Q psy9327 199 NVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIV 276 (641)
Q Consensus 199 ~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~ 276 (641)
....+|...|.... +.|--.+ +++++-|..|++|| +.++.+.++. |-..|..++|+.|.+.|++||.|..+.+|
T Consensus 361 ~rmtgHq~lVn~V~-fSPd~r~---IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw 436 (480)
T KOG0271|consen 361 TRMTGHQALVNHVS-FSPDGRY---IASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVW 436 (480)
T ss_pred hhhhchhhheeeEE-ECCCccE---EEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCCceEEEE
Confidence 67777776665422 2221111 77888999999999 7788888888 68899999999999999999999999999
Q ss_pred cCCCCeEeccccc-----eEE--EEEcCcEEEEEeCCCCeEEEE
Q psy9327 277 NGDHGIIRTLDLP-----IYI--TKIKGNQVYYLDRECSPHVLR 313 (641)
Q Consensus 277 ~~~~g~I~~~d~p-----~~~--~~~~g~~v~~~~~dg~i~v~~ 313 (641)
......+. .|+| ++. +..+|.+|.++..|..+++|.
T Consensus 437 ~V~tkKl~-~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 437 DVRTKKLK-QDLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred Eeeeeeec-ccCCCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence 87666554 2555 444 678899999999999999985
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=257.99 Aligned_cols=278 Identities=17% Similarity=0.261 Sum_probs=237.6
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
+.|+||.+.|.++.|++|++++++++.||.+.|||.-+...+..+.-.+..|...+|+|++.++++||
T Consensus 49 r~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGG------------ 116 (343)
T KOG0286|consen 49 RTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGG------------ 116 (343)
T ss_pred EEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecC------------
Confidence 57899999999999999999999999999999999988888888888899999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCC------eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeE
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQR------KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~------~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i 156 (641)
-|....||++.+. +....+.+|.+++.++.|.+| .+|+++|.|.++.+||+++++.+
T Consensus 117 ----------------LdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD-~~ilT~SGD~TCalWDie~g~~~ 179 (343)
T KOG0286|consen 117 ----------------LDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDD-NHILTGSGDMTCALWDIETGQQT 179 (343)
T ss_pred ----------------cCceeEEEecccccccccceeeeeecCccceeEEEEEcCC-CceEecCCCceEEEEEcccceEE
Confidence 9999999999865 456679999999999999984 57999999999999999999999
Q ss_pred EEEccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEE
Q psy9327 157 CVLTGHNHYVMCAQFHP-TDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHI 235 (641)
Q Consensus 157 ~~l~~h~~~V~sl~fsp-~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i 235 (641)
..|.||.+.|.+++++| ++++++||+-|++.++||++.+.+.+++++|...|.++.. +| ....+++|+.|++.++
T Consensus 180 ~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~f-fP---~G~afatGSDD~tcRl 255 (343)
T KOG0286|consen 180 QVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRF-FP---SGDAFATGSDDATCRL 255 (343)
T ss_pred EEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEE-cc---CCCeeeecCCCceeEE
Confidence 99999999999999999 8999999999999999999999999999999887776442 22 2233789999999999
Q ss_pred ec-CCCcceeeecC---CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecc---ccceE--EEEEcCcEEEEEeC
Q psy9327 236 CN-RKMEPLCNIHE---NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTL---DLPIY--ITKIKGNQVYYLDR 305 (641)
Q Consensus 236 ~d-~~~~~~~~~~~---~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~---d~p~~--~~~~~g~~v~~~~~ 305 (641)
|| +....+..+.+ ..+|++++|+-.|++|++|..|..+.+|+.-.+. +-.+ +.-+. ...++|.-+.+++-
T Consensus 256 yDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSW 335 (343)
T KOG0286|consen 256 YDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSW 335 (343)
T ss_pred EeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecch
Confidence 99 44555555554 5689999999999999999998888888643332 2222 11121 23467888889999
Q ss_pred CCCeEEEE
Q psy9327 306 ECSPHVLR 313 (641)
Q Consensus 306 dg~i~v~~ 313 (641)
|..+++|.
T Consensus 336 Ds~lriW~ 343 (343)
T KOG0286|consen 336 DSTLRIWA 343 (343)
T ss_pred hHheeecC
Confidence 99999984
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=267.88 Aligned_cols=280 Identities=21% Similarity=0.360 Sum_probs=241.2
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
+.+.+|.+.|.|+++.|-..|+++|+.|++|+|||+.+|++..++.+|-..|.++++|+..+++++++
T Consensus 145 rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~g------------ 212 (460)
T KOG0285|consen 145 RVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAG------------ 212 (460)
T ss_pred hhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEec------------
Confidence 56789999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h 162 (641)
.|+.|+.||++..+.++.+.||...|.|++.||.-..|++|+.|.+++|||++++..++++.||
T Consensus 213 ----------------edk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH 276 (460)
T KOG0285|consen 213 ----------------EDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGH 276 (460)
T ss_pred ----------------CCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCc
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKME 241 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~ 241 (641)
..+|.++.+.|-...++|||.|++|++||++.++...++..|.+.++++. .||--.. ++++ +...++-|+ ..+.
T Consensus 277 ~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~-lhP~e~~---fASa-s~dnik~w~~p~g~ 351 (460)
T KOG0285|consen 277 TNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALC-LHPKENL---FASA-SPDNIKQWKLPEGE 351 (460)
T ss_pred CCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeecccceeeEEe-cCCchhh---hhcc-CCccceeccCCccc
Confidence 99999999999999999999999999999999999999999999988854 3432211 2333 455688888 4455
Q ss_pred ceeeecC-CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe----Eeccccc--------eEE--EEEcCcEEEEEeCC
Q psy9327 242 PLCNIHE-NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI----IRTLDLP--------IYI--TKIKGNQVYYLDRE 306 (641)
Q Consensus 242 ~~~~~~~-~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~----I~~~d~p--------~~~--~~~~g~~v~~~~~d 306 (641)
.+..+.. ...|.+++...|| ++++|++++.++.|+-++|- ..+...| ++. +...|.+++++..|
T Consensus 352 f~~nlsgh~~iintl~~nsD~-v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~ead 430 (460)
T KOG0285|consen 352 FLQNLSGHNAIINTLSVNSDG-VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEAD 430 (460)
T ss_pred hhhccccccceeeeeeeccCc-eEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCC
Confidence 5555443 6678889988886 57789999999999877763 2122222 222 33468999999999
Q ss_pred CCeEEEEeCC
Q psy9327 307 CSPHVLRIDP 316 (641)
Q Consensus 307 g~i~v~~~~~ 316 (641)
.+|++|.-|.
T Consensus 431 KtIk~~keDe 440 (460)
T KOG0285|consen 431 KTIKMYKEDE 440 (460)
T ss_pred cceEEEeccc
Confidence 9999998775
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-32 Score=257.80 Aligned_cols=241 Identities=20% Similarity=0.335 Sum_probs=199.6
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
++.|+||+..|..+..++||++.++++.||++++||+.+++....|.+|...|.+++|+||.+.+++|+
T Consensus 56 ~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGS----------- 124 (315)
T KOG0279|consen 56 VRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGS----------- 124 (315)
T ss_pred eeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCC-----------
Confidence 578999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccC--CCCeEEEEEccC--CCEEEEEeCCCeEEEEECCCCeeEE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH--LDYIRTTFFHHE--YPWILSASDDQTIRIWYWQSRNCIC 157 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h--~~~V~~v~fsp~--~~~l~sgs~Dg~I~vWd~~~~~~i~ 157 (641)
.|.+|++||... .+..++..+ .+-|.|+.|+|+ .+.|+++|.|++|++||+++-+...
T Consensus 125 -----------------rDkTiklwnt~g-~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~ 186 (315)
T KOG0279|consen 125 -----------------RDKTIKLWNTLG-VCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRT 186 (315)
T ss_pred -----------------Ccceeeeeeecc-cEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhh
Confidence 999999999874 455555443 789999999998 7899999999999999999999999
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
.+.||+++++.+.++|||.+.++|+.||.+.+||++.++....+.+ ...|.++.....-+- .....+..|+|||
T Consensus 187 ~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a-~~~v~sl~fspnryw-----L~~at~~sIkIwd 260 (315)
T KOG0279|consen 187 TFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEA-FDIVNSLCFSPNRYW-----LCAATATSIKIWD 260 (315)
T ss_pred ccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEeccC-CCeEeeEEecCCcee-----EeeccCCceEEEe
Confidence 9999999999999999999999999999999999999888777653 344444332211111 1222455699999
Q ss_pred CC-Ccceeeec----------CCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 238 RK-MEPLCNIH----------ENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 238 ~~-~~~~~~~~----------~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
.. ...+..+. ......+++|+++|..|++|-.++-+.+|.
T Consensus 261 l~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~q 311 (315)
T KOG0279|consen 261 LESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQ 311 (315)
T ss_pred ccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEE
Confidence 33 22222222 134567899999999999987776666664
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=275.19 Aligned_cols=242 Identities=24% Similarity=0.397 Sum_probs=217.1
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccccc-ccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEH-EGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h-~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
++.|.++|.++.|+++|.+++||+.+|.|+.|+..+. .+..++.| ...|++++|+|+...|++++
T Consensus 134 lQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmn-nVk~~~ahh~eaIRdlafSpnDskF~t~S------------- 199 (464)
T KOG0284|consen 134 LQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMN-NVKIIQAHHAEAIRDLAFSPNDSKFLTCS------------- 199 (464)
T ss_pred hhhhcccceeEEEccCCCEEEEcCCCceEEecccchh-hhHHhhHhhhhhhheeccCCCCceeEEec-------------
Confidence 5789999999999999999999999999999997665 44555554 59999999999999999998
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCC
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~ 163 (641)
+||+|+|||....+....+.+|.-.|++++|||...+++|||.|..|++||.++++|+.++.+|.
T Consensus 200 ---------------dDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HK 264 (464)
T KOG0284|consen 200 ---------------DDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHK 264 (464)
T ss_pred ---------------CCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC-Ccc
Q psy9327 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK-MEP 242 (641)
Q Consensus 164 ~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~-~~~ 242 (641)
..|+.+.|+|++++|+|+|.|+.++++|+++.+.+.++.+|.+.+.+ ...||+..-. +.+|+.||.+..|.-. .++
T Consensus 265 ntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~-~~WhP~~~~l--ftsgg~Dgsvvh~~v~~~~p 341 (464)
T KOG0284|consen 265 NTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTS-LTWHPLNESL--FTSGGSDGSVVHWVVGLEEP 341 (464)
T ss_pred ceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhhee-eccccccccc--eeeccCCCceEEEecccccc
Confidence 99999999999999999999999999999999999999999999887 4556655433 5588899999999944 445
Q ss_pred eeeec--CCcceEEEEEcCCccEEEEecCCeEEEEEcC
Q psy9327 243 LCNIH--ENTRVKSGAWDESGVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 243 ~~~~~--~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~ 278 (641)
+..+. +...|++++|+|=|..|++|++|..+.+|.-
T Consensus 342 ~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r 379 (464)
T KOG0284|consen 342 LGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTR 379 (464)
T ss_pred ccCCCcccccceeeeeccccceeEeecCCCcceeeecc
Confidence 54444 4789999999999999999999888888863
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-31 Score=272.80 Aligned_cols=256 Identities=23% Similarity=0.346 Sum_probs=225.4
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
|++.|+-..-+|.+..|-+..+|+++|+.|+.|++|++.+++.+..|+.|+.-|++|+.||..|++++++
T Consensus 47 mVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsS---------- 116 (794)
T KOG0276|consen 47 MVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSS---------- 116 (794)
T ss_pred eeeeeeecccchhhheeeeccceEEEecCCceEEEEecccceeeEEeeccccceeeeeecCCCCeEEecC----------
Confidence 6788999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCC-eeEEEEccCCCCeEEEEEccC-CCEEEEEeCCCeEEEEECCCCeeEEE
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFHHE-YPWILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~-~~~~~~~~h~~~V~~v~fsp~-~~~l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
+|-+|++||++.+ .+.++|+||...|.+++|.|. .+.|+|||-|++|+||.+.+..+.++
T Consensus 117 ------------------DDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfT 178 (794)
T KOG0276|consen 117 ------------------DDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFT 178 (794)
T ss_pred ------------------CccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCcee
Confidence 9999999999865 788999999999999999994 56899999999999999999999999
Q ss_pred EccCCCCEEEEEEecCC--CEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEe
Q psy9327 159 LTGHNHYVMCAQFHPTD--DIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g--~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~ 236 (641)
+.||...|.|+.|-|-| ++++||++|.+++|||.++..|++++.||.+.|.. ..+||-+.+ +.+|++||++++|
T Consensus 179 l~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~-v~fhp~lpi---iisgsEDGTvriW 254 (794)
T KOG0276|consen 179 LEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSF-VFFHPELPI---IISGSEDGTVRIW 254 (794)
T ss_pred eeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceE-EEecCCCcE---EEEecCCccEEEe
Confidence 99999999999999855 79999999999999999999999999999877765 667776665 7789999999999
Q ss_pred cCC-Ccceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEecccc
Q psy9327 237 NRK-MEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDL 288 (641)
Q Consensus 237 d~~-~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~ 288 (641)
+.. .....++. ...++++++-.+.+..++.|...|.+.+--|.+.....+|.
T Consensus 255 hs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v~lgreeP~vsMd~ 308 (794)
T KOG0276|consen 255 NSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVTVKLGREEPAVSMDS 308 (794)
T ss_pred cCcceehhhhhhcCCceEEEEeecCCCCeEEEeccCCcEEEEccCCCCceeecC
Confidence 943 33333333 36789999999888889999888877776665544443433
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-32 Score=261.40 Aligned_cols=276 Identities=24% Similarity=0.328 Sum_probs=231.3
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccc--------cccccCeEEEEEeCCCCEEEEeceeeEEeee
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF--------DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~--------~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~ 78 (641)
+.++.+.|..|||||++|++|+.||.|.+||+.+|+..+.+ --++.+|.|+.|+.|...+++|+
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGs-------- 282 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGS-------- 282 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccC--------
Confidence 45677889999999999999999999999999999765433 23788999999999999999998
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc-cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL-GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~-~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~ 157 (641)
.||.|+||.+++|.|++.|. .|...|+++.|+.|+..++|+|.|.++++.-+++|+++.
T Consensus 283 --------------------qDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LK 342 (508)
T KOG0275|consen 283 --------------------QDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLK 342 (508)
T ss_pred --------------------cCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHH
Confidence 99999999999999999998 799999999999999999999999999999999999999
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCc--eeeecccCCCceeeeeeeeeeCCCeeEEE
Q psy9327 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGK--LVLSMKSKHPIWKYCKPVKYCNPKHTLHI 235 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~--~v~s~~~~~~v~~~~~~l~s~~~d~~I~i 235 (641)
.++||..+|+.+.|.++|..++|+|.||+|++|+..+.+|..++...+. .|.++ ++.-+..-.+..|...+++.+
T Consensus 343 EfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv---~~~PKnpeh~iVCNrsntv~i 419 (508)
T KOG0275|consen 343 EFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSV---ILLPKNPEHFIVCNRSNTVYI 419 (508)
T ss_pred HhcCccccccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeE---EEcCCCCceEEEEcCCCeEEE
Confidence 9999999999999999999999999999999999999999988864431 12110 000011111566778889999
Q ss_pred ecCCCcceeeecC----CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe-cc---cc-ceEE-EEEcCcEEEEEeC
Q psy9327 236 CNRKMEPLCNIHE----NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR-TL---DL-PIYI-TKIKGNQVYYLDR 305 (641)
Q Consensus 236 ~d~~~~~~~~~~~----~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~-~~---d~-p~~~-~~~~g~~v~~~~~ 305 (641)
.+..+..+.++.. ++...+++.+|.|.++++.++|+.++.++...|.+. ++ +. ++-+ -+++.+.+.+.+.
T Consensus 420 mn~qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYsE 499 (508)
T KOG0275|consen 420 MNMQGQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQNLLASYSE 499 (508)
T ss_pred EeccceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeeecccccccccccCcccchhhhhcc
Confidence 9988888888764 567788999999999999999999998887776543 22 11 1222 4467888999999
Q ss_pred CCCeEEEE
Q psy9327 306 ECSPHVLR 313 (641)
Q Consensus 306 dg~i~v~~ 313 (641)
||.++.|.
T Consensus 500 DgllKLWk 507 (508)
T KOG0275|consen 500 DGLLKLWK 507 (508)
T ss_pred cchhhhcC
Confidence 99999984
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.7e-30 Score=258.23 Aligned_cols=274 Identities=16% Similarity=0.223 Sum_probs=238.1
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
..|++|+|+.+|..||+|+.||.++||+. .|.++.++..|.+||.++.|+.+|.+|++++
T Consensus 236 kdVT~L~Wn~~G~~LatG~~~G~~riw~~-~G~l~~tl~~HkgPI~slKWnk~G~yilS~~------------------- 295 (524)
T KOG0273|consen 236 KDVTSLDWNNDGTLLATGSEDGEARIWNK-DGNLISTLGQHKGPIFSLKWNKKGTYILSGG------------------- 295 (524)
T ss_pred CCcceEEecCCCCeEEEeecCcEEEEEec-CchhhhhhhccCCceEEEEEcCCCCEEEecc-------------------
Confidence 57999999999999999999999999995 5778999999999999999999999999998
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl 169 (641)
-|+++.+||..+|+....|.-|..+--++.|-.+. -|++++.|+.|+|+.+...+++.++.||.+.|.++
T Consensus 296 ---------vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~-~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~al 365 (524)
T KOG0273|consen 296 ---------VDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSND-EFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNAL 365 (524)
T ss_pred ---------CCccEEEEeccCceEEEeeeeccCCccceEEecCc-eEeecCCCceEEEEEecCCCcceeeecccCceEEE
Confidence 99999999999999999999999987788887665 49999999999999999999999999999999999
Q ss_pred EEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceee------eeeeeeeCCCeeEEEec-CCCcc
Q psy9327 170 QFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKY------CKPVKYCNPKHTLHICN-RKMEP 242 (641)
Q Consensus 170 ~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~------~~~l~s~~~d~~I~i~d-~~~~~ 242 (641)
.|+|.|.+|+|+|+|+|++||+.....+...+..|.+.++++.. .|.-.. ...+++++.|.+|++|| ..+.+
T Consensus 366 k~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~w-sp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~ 444 (524)
T KOG0273|consen 366 KWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKW-SPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVP 444 (524)
T ss_pred EECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEee-cCCCCccCCCcCCceEEEeecCCeEEEEEccCCce
Confidence 99999999999999999999999988888888888888876432 121111 12378889999999999 78888
Q ss_pred eeee-cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE-eccccceE----EEEEcCcEEEEEeCCCCeEEEEe
Q psy9327 243 LCNI-HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII-RTLDLPIY----ITKIKGNQVYYLDRECSPHVLRI 314 (641)
Q Consensus 243 ~~~~-~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I-~~~d~p~~----~~~~~g~~v~~~~~dg~i~v~~~ 314 (641)
+..+ .+..+|.+++|+|+|.++++|+-++.+.+|+...+.+ +.....-+ .|...|+.+...-.|+.+++.++
T Consensus 445 i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~~~~Ifel~Wn~~G~kl~~~~sd~~vcvldl 522 (524)
T KOG0273|consen 445 IHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQGTGGIFELCWNAAGDKLGACASDGSVCVLDL 522 (524)
T ss_pred eEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeecCCCeEEEEEEcCCCCEEEEEecCCCceEEEe
Confidence 8888 6799999999999999999999999999999877654 34332222 25567888888888888888765
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-31 Score=283.16 Aligned_cols=174 Identities=25% Similarity=0.467 Sum_probs=168.3
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
+++-||+++|.+++|+|+.++|++|+.|++||+|.+.+...+-.+++|..||..+.|+|.|-+|||++
T Consensus 445 ~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas------------ 512 (707)
T KOG0263|consen 445 RTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATAS------------ 512 (707)
T ss_pred EEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecC------------
Confidence 46889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h 162 (641)
+|++-++|......+++.|.+|.+.|.|+.|||+..++++||.|.+|++||+.+|..++.|.||
T Consensus 513 ----------------~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH 576 (707)
T KOG0263|consen 513 ----------------HDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGH 576 (707)
T ss_pred ----------------CCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM 204 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~ 204 (641)
.++|.+++|+|+|.+|+||+.||.|.+||+.+++....+.+|
T Consensus 577 ~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~H 618 (707)
T KOG0263|consen 577 KGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGH 618 (707)
T ss_pred CCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcc
Confidence 999999999999999999999999999999998887777655
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-30 Score=254.42 Aligned_cols=284 Identities=20% Similarity=0.301 Sum_probs=247.7
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
...+.+|..+|+.+-|||+...+++++.|++|++||+.+|+....+++|...|..|+|+..|.++++++
T Consensus 101 ~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcS----------- 169 (406)
T KOG0295|consen 101 VQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCS----------- 169 (406)
T ss_pred hhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecC-----------
Confidence 456789999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCC-CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQ-RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t-~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~ 160 (641)
.|-.+++||..+ .+++..+.+|+..|.+++|-|.|.+++|++.|.+|+.|++.++-|+.+|.
T Consensus 170 -----------------sDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~ 232 (406)
T KOG0295|consen 170 -----------------SDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFP 232 (406)
T ss_pred -----------------CccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEecc
Confidence 888899999987 57788889999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeee-----e------eeeeeCC
Q psy9327 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYC-----K------PVKYCNP 229 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~-----~------~l~s~~~ 229 (641)
+|...|+.+..+.||.+++|+|.|+++++|-..+++++..+..|.+++-+.+..|-..... . .+.+++.
T Consensus 233 ~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~Sr 312 (406)
T KOG0295|consen 233 GHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSR 312 (406)
T ss_pred CchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecc
Confidence 9999999999999999999999999999999999999999999988888755443322111 1 2667889
Q ss_pred CeeEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eeccccc-----eEEEEEcCcEEE
Q psy9327 230 KHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDLP-----IYITKIKGNQVY 301 (641)
Q Consensus 230 d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~p-----~~~~~~~g~~v~ 301 (641)
|++|++|| ..+.++.++. +...|..++|+|.|+||+++.+|+.+.+|+..++. .++|+.+ ...++.....++
T Consensus 313 DktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~Vv 392 (406)
T KOG0295|consen 313 DKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVV 392 (406)
T ss_pred cceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEE
Confidence 99999999 5556665554 58899999999999999999999999999977764 4455543 111344566899
Q ss_pred EEeCCCCeEEEE
Q psy9327 302 YLDRECSPHVLR 313 (641)
Q Consensus 302 ~~~~dg~i~v~~ 313 (641)
+++-|.++++|.
T Consensus 393 TGsVdqt~KvwE 404 (406)
T KOG0295|consen 393 TGSVDQTVKVWE 404 (406)
T ss_pred eccccceeeeee
Confidence 999999999995
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-28 Score=247.16 Aligned_cols=281 Identities=22% Similarity=0.386 Sum_probs=236.6
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
++++|++|.++|++++|+|+++++++++.||.|++||+.+++....+..|..++..+.|+|++..+++++
T Consensus 1 ~~~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---------- 70 (289)
T cd00200 1 LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGS---------- 70 (289)
T ss_pred CchHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEc----------
Confidence 4678999999999999999999999999999999999998888888889999999999999999999998
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~ 160 (641)
.|+.|++||+.+++.+..+..|...+.++.|++++.++++++.|+.|++||+++++....+.
T Consensus 71 ------------------~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 132 (289)
T cd00200 71 ------------------SDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLR 132 (289)
T ss_pred ------------------CCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEec
Confidence 89999999999988889999999999999999998889998889999999999999999999
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC-
Q psy9327 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK- 239 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~- 239 (641)
.|...+.++.|+|++.++++++.|+.+++||+++++....+..+...+.++.....- ..+.+++.++.+.+||.+
T Consensus 133 ~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~----~~l~~~~~~~~i~i~d~~~ 208 (289)
T cd00200 133 GHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDG----EKLLSSSSDGTIKLWDLST 208 (289)
T ss_pred cCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCc----CEEEEecCCCcEEEEECCC
Confidence 999999999999999999999889999999999888777777665555543322110 125566679999999944
Q ss_pred Ccceeee-cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eeccc---cceEE--EEEcCcEEEEEeCCCCeEEE
Q psy9327 240 MEPLCNI-HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLD---LPIYI--TKIKGNQVYYLDRECSPHVL 312 (641)
Q Consensus 240 ~~~~~~~-~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d---~p~~~--~~~~g~~v~~~~~dg~i~v~ 312 (641)
......+ .+...+.+++|+|++.++++++.++.+.+|+...+. +..+. .++.. +..++..+++++.||.+++|
T Consensus 209 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw 288 (289)
T cd00200 209 GKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIW 288 (289)
T ss_pred CceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEec
Confidence 5555666 456699999999999999988889999999987544 33332 12222 44556899999999999998
Q ss_pred E
Q psy9327 313 R 313 (641)
Q Consensus 313 ~ 313 (641)
+
T Consensus 289 ~ 289 (289)
T cd00200 289 D 289 (289)
T ss_pred C
Confidence 4
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-28 Score=269.76 Aligned_cols=280 Identities=24% Similarity=0.385 Sum_probs=229.0
Q ss_pred eeccC-CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc--ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 4 KFETK-SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT--LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 4 ~~~~H-~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~--~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
.+.+| ...|.++.|+|+|.++++++.|+.+++|+...++ ....+.+|...|.+++|+|++.++++++
T Consensus 153 ~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s---------- 222 (456)
T KOG0266|consen 153 TLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGS---------- 222 (456)
T ss_pred eecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEec----------
Confidence 34444 7889999999999999999999999999997777 7777789999999999999999999998
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEEC-CCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNY-KQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~-~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l 159 (641)
.|++|++||+ ..+..+.++.+|...|++++|+|++++++||+.|++|+|||+++++++..+
T Consensus 223 ------------------~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l 284 (456)
T KOG0266|consen 223 ------------------DDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKL 284 (456)
T ss_pred ------------------CCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEee
Confidence 9999999999 556899999999999999999999999999999999999999999999999
Q ss_pred ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCc--eeeeccCCCce--eeecccCCCceeeeeeeeeeCCCeeEEE
Q psy9327 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR--KKNVAPGMGKL--VLSMKSKHPIWKYCKPVKYCNPKHTLHI 235 (641)
Q Consensus 160 ~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~--~~~~~~~~~~~--v~s~~~~~~v~~~~~~l~s~~~d~~I~i 235 (641)
.+|.+.|++++|++++..+++++.||.|++||..++. +...+.++... +.+ ..++|-..+ +.++..++.+++
T Consensus 285 ~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~~fsp~~~~---ll~~~~d~~~~~ 360 (456)
T KOG0266|consen 285 KGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTS-VQFSPNGKY---LLSASLDRTLKL 360 (456)
T ss_pred eccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeE-EEECCCCcE---EEEecCCCeEEE
Confidence 9999999999999999999999999999999999998 45566554333 333 333443333 667778999999
Q ss_pred ec-CCCcceeeecC--C--cceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe-ccccc------eEEEEEcCcEEEEE
Q psy9327 236 CN-RKMEPLCNIHE--N--TRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR-TLDLP------IYITKIKGNQVYYL 303 (641)
Q Consensus 236 ~d-~~~~~~~~~~~--~--~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~-~~d~p------~~~~~~~g~~v~~~ 303 (641)
|| .++........ . ..+.+....+.|.++++|+.++.+.+|+..++.+. .++.. ...++...+.+.+.
T Consensus 361 w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~ 440 (456)
T KOG0266|consen 361 WDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASS 440 (456)
T ss_pred EEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCCcCeeeec
Confidence 99 33544444332 2 24555666788999999999999999998865432 22221 11245566777777
Q ss_pred e--CCCCeEEEEeC
Q psy9327 304 D--RECSPHVLRID 315 (641)
Q Consensus 304 ~--~dg~i~v~~~~ 315 (641)
+ .|+.+++|..+
T Consensus 441 s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 441 SFEGDGLIRLWKYD 454 (456)
T ss_pred CcCCCceEEEecCC
Confidence 6 78899999765
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-28 Score=230.96 Aligned_cols=278 Identities=18% Similarity=0.285 Sum_probs=223.1
Q ss_pred ceeeccCCCCeEEEEEccC-CCeEEEEeCCCcEEEEECccCc---ccccc-cccccCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 2 LTKFETKSARVKGLSFHPK-RPWILSSLHNGVIQLWDYRMNT---LLEKF-DEHEGPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspd-g~~Lasg~~dg~I~iWD~~~~~---~l~~~-~~h~~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
++++++|.++|..++|||- |..||+||.|+.|++|+...+. +...+ .+|...|++++|+|.|++|++++
T Consensus 7 ~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aS------ 80 (312)
T KOG0645|consen 7 EQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASAS------ 80 (312)
T ss_pred EEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEee------
Confidence 5788999999999999997 8899999999999999987432 23233 36999999999999999999998
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCC--eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC-
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR--KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR- 153 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~--~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~- 153 (641)
.|.++.||.=..+ +++.+++||+..|.+++|+++|.+||+++.|..|.||.....
T Consensus 81 ----------------------FD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~dedd 138 (312)
T KOG0645|consen 81 ----------------------FDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDD 138 (312)
T ss_pred ----------------------ccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCC
Confidence 9999999986544 788999999999999999999999999999999999998743
Q ss_pred --eeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecC---CCceeeeccCCCceeeecccCCCceeeeeeeeeeC
Q psy9327 154 --NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS---GLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCN 228 (641)
Q Consensus 154 --~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~---~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~ 228 (641)
.|+..+.+|...|..+.|||...+|+|+|.|.+|++|+-. ...+.+++.++...|.++..... ...+++++
T Consensus 139 Efec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~----G~rl~s~s 214 (312)
T KOG0645|consen 139 EFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNI----GSRLVSCS 214 (312)
T ss_pred cEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCC----CceEEEec
Confidence 5889999999999999999999999999999999999865 45667888877666655332211 11377899
Q ss_pred CCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe----Ee---------ccccceEEEEE
Q psy9327 229 PKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI----IR---------TLDLPIYITKI 295 (641)
Q Consensus 229 ~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~----I~---------~~d~p~~~~~~ 295 (641)
.|++++||-.. .-....+...+..++|. ...|++++.|+.+.++...++. .. ..+.....+..
T Consensus 215 dD~tv~Iw~~~--~~~~~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p 290 (312)
T KOG0645|consen 215 DDGTVSIWRLY--TDLSGMHSRALYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNP 290 (312)
T ss_pred CCcceEeeeec--cCcchhcccceEeeeec--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcC
Confidence 99999999733 11111246788999999 4579999999999988655431 11 11222333444
Q ss_pred -cCcEEEEEeCCCCeEEEEeC
Q psy9327 296 -KGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 296 -~g~~v~~~~~dg~i~v~~~~ 315 (641)
..+++++++.||.+++|.+.
T Consensus 291 ~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 291 KVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred CCCCceeecCCCceEEEEEec
Confidence 37899999999999999864
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-30 Score=255.95 Aligned_cols=274 Identities=19% Similarity=0.270 Sum_probs=225.9
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
+..|..+.|.|+|+.|++|+..|.+.+|+..+-..-..++.|+.+|+++.|++++.+++||+
T Consensus 96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD------------------ 157 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGD------------------ 157 (464)
T ss_pred ccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcC------------------
Confidence 45799999999999999999999999999765544455678999999999999999999998
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEcc-CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEE
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG-HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVM 167 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~-h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~ 167 (641)
.+|.|++|+..... +..+.+ |...|++++|+|++..|+++|+|++|+|||....+.-..+.||.-.|.
T Consensus 158 ----------~gG~iKyWqpnmnn-Vk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVk 226 (464)
T KOG0284|consen 158 ----------KGGMIKYWQPNMNN-VKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVK 226 (464)
T ss_pred ----------CCceEEecccchhh-hHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcc
Confidence 99999999987655 444455 458999999999999999999999999999998888888999999999
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC-Ccceeee
Q psy9327 168 CAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK-MEPLCNI 246 (641)
Q Consensus 168 sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~-~~~~~~~ 246 (641)
|++|||...+|+|||.|..|++||.++++++.++.+|...|+.+... +-. .-+++++.|+.++++|.+ .+.+..+
T Consensus 227 svdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~-~n~---N~Llt~skD~~~kv~DiR~mkEl~~~ 302 (464)
T KOG0284|consen 227 SVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFN-PNG---NWLLTGSKDQSCKVFDIRTMKELFTY 302 (464)
T ss_pred eeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEc-CCC---CeeEEccCCceEEEEehhHhHHHHHh
Confidence 99999999999999999999999999999999999999998875422 111 127889999999999955 5555555
Q ss_pred c-CCcceEEEEEcCCc-cEEEEecCCeEEEEEcCC-CCeEecccc----c--eEEEEEcCcEEEEEeCCCCeEEEEeC
Q psy9327 247 H-ENTRVKSGAWDESG-VFIYTTSNHIKYAIVNGD-HGIIRTLDL----P--IYITKIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 247 ~-~~~~I~sla~~p~g-~~L~t~s~~~k~~l~~~~-~g~I~~~d~----p--~~~~~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
. +...+++++|+|-. ..+.+|+.|+.+..|... ...+-.+.. . ...++.-|..+.+++.|.+++.|.-+
T Consensus 303 r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~ 380 (464)
T KOG0284|consen 303 RGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRN 380 (464)
T ss_pred hcchhhheeeccccccccceeeccCCCceEEEeccccccccCCCcccccceeeeeccccceeEeecCCCcceeeeccC
Confidence 5 68899999999974 456677788888877643 211111111 0 11356778999999999999999654
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-28 Score=238.86 Aligned_cols=285 Identities=18% Similarity=0.260 Sum_probs=237.0
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+..|..|+++|.+++.||+.+++++||.|..-.+|+..+|+....+.+|...|.++.|+.+|.+|++|+
T Consensus 57 ~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGd----------- 125 (399)
T KOG0296|consen 57 LVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGD----------- 125 (399)
T ss_pred eeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecC-----------
Confidence 468999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~ 161 (641)
.+|.|+||+..++.....+...-+.+.-+.|||.+..|+.|+.||.+.+|.+.++.....+.|
T Consensus 126 -----------------msG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~G 188 (399)
T KOG0296|consen 126 -----------------MSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSG 188 (399)
T ss_pred -----------------CCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecC
Confidence 999999999999999988876677888899999999999999999999999999888889999
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC---------------------------------Ccee
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM---------------------------------GKLV 208 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~---------------------------------~~~v 208 (641)
|+.++++-.|.|+|+.++++..||+|++||..+++......+. ++.+
T Consensus 189 h~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv 268 (399)
T KOG0296|consen 189 HNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVV 268 (399)
T ss_pred CCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEE
Confidence 9999999999999999999999999999999999887766521 0111
Q ss_pred eecccCCCcee----------------eeee-eeeeCCCeeEEEecCCC-cceeeecCCcceEEEEEcCCccEEEEecCC
Q psy9327 209 LSMKSKHPIWK----------------YCKP-VKYCNPKHTLHICNRKM-EPLCNIHENTRVKSGAWDESGVFIYTTSNH 270 (641)
Q Consensus 209 ~s~~~~~~v~~----------------~~~~-l~s~~~d~~I~i~d~~~-~~~~~~~~~~~I~sla~~p~g~~L~t~s~~ 270 (641)
.+.....|... ..++ .+.|+-|++|.|||... .......+...|+.+.|.+ ..+|++++.+
T Consensus 269 ~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~w~~-t~~l~t~c~~ 347 (399)
T KOG0296|consen 269 NCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICEHEDGVTKLKWLN-TDYLLTACAN 347 (399)
T ss_pred EecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheeccCCCceEEEEEcC-cchheeeccC
Confidence 11111111111 0111 35667899999999443 3334445677899999999 6899999999
Q ss_pred eEEEEEcCCCCeEecc----ccceE--EEEEcCcEEEEEeCCCCeEEEEeC
Q psy9327 271 IKYAIVNGDHGIIRTL----DLPIY--ITKIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 271 ~k~~l~~~~~g~I~~~----d~p~~--~~~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
|++..|+...|....- ..+++ +...+++.|++.+.|++.+|+...
T Consensus 348 g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 348 GKVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred ceEEeeeccccceEEEEecCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 9999999999876532 22332 344678999999999999998653
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-29 Score=268.62 Aligned_cols=242 Identities=21% Similarity=0.384 Sum_probs=211.2
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc-------------------------------ccccccccc
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT-------------------------------LLEKFDEHE 51 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~-------------------------------~l~~~~~h~ 51 (641)
.+|..-...++|..|++|+.++|.|..|..|++|.+...+ ...++-+|+
T Consensus 372 YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~ 451 (707)
T KOG0263|consen 372 YTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHS 451 (707)
T ss_pred EEEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCC
Confidence 4555566789999999999999999999999999986311 112355899
Q ss_pred cCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc
Q psy9327 52 GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131 (641)
Q Consensus 52 ~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp 131 (641)
+||.+..|+|+.++|++++ .|++|++|.+.+..++-.+.||..||.++.|+|
T Consensus 452 GPVyg~sFsPd~rfLlScS----------------------------ED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P 503 (707)
T KOG0263|consen 452 GPVYGCSFSPDRRFLLSCS----------------------------EDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAP 503 (707)
T ss_pred Cceeeeeecccccceeecc----------------------------CCcceeeeecccceeEEEecCCCcceeeEEecC
Confidence 9999999999999999998 999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeec
Q psy9327 132 EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSM 211 (641)
Q Consensus 132 ~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~ 211 (641)
.|-+|||||.|++-++|......+.+.+-||.+.|.|+.|||+..++++||.|++||+||+.++..++.+.|
T Consensus 504 ~GyYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~G-------- 575 (707)
T KOG0263|consen 504 RGYYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTG-------- 575 (707)
T ss_pred CceEEEecCCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecC--------
Confidence 999999999999999999999999999999999999999999999999999999999999999877666654
Q ss_pred ccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe-cc---c
Q psy9327 212 KSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR-TL---D 287 (641)
Q Consensus 212 ~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~-~~---d 287 (641)
|..+|.+++|+|+|++|++|+.++.+.+|+..+|.+. .+ .
T Consensus 576 ------------------------------------H~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht 619 (707)
T KOG0263|consen 576 ------------------------------------HKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHT 619 (707)
T ss_pred ------------------------------------CCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhccc
Confidence 3578889999999999999999999999987665432 11 1
Q ss_pred cceE--EEEEcCcEEEEEeCCCCeEEEEeCC
Q psy9327 288 LPIY--ITKIKGNQVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 288 ~p~~--~~~~~g~~v~~~~~dg~i~v~~~~~ 316 (641)
..++ .+..+|..+++++.|..+++|++..
T Consensus 620 ~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 620 GTIYSLSFSRDGNVLASGGADNSVRLWDLTK 650 (707)
T ss_pred CceeEEEEecCCCEEEecCCCCeEEEEEchh
Confidence 1122 2457899999999999999997764
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-28 Score=233.90 Aligned_cols=237 Identities=16% Similarity=0.216 Sum_probs=203.8
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC------cccccccccccCeEEEEEeCCCCEEEEeceeeEEeee
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN------TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~------~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~ 78 (641)
++-.+..|..++|+|.|+++|+||-|+...||++.+. ...+.+.+|.+-+.|+.|-+| ..|++++
T Consensus 93 ipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD-~~ilT~S-------- 163 (343)
T KOG0286|consen 93 IPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDD-NHILTGS-------- 163 (343)
T ss_pred EecCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcCC-CceEecC--------
Confidence 3444678999999999999999999999999999755 345668899999999999885 4677776
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeeEE
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQSRNCIC 157 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~~~~~i~ 157 (641)
.|.+..+||+++|+.+..|.+|.+.|.+++++| +++.|+||+-|++.++||++.+.|.+
T Consensus 164 --------------------GD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~q 223 (343)
T KOG0286|consen 164 --------------------GDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQ 223 (343)
T ss_pred --------------------CCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeE
Confidence 899999999999999999999999999999999 89999999999999999999999999
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeee-----eeeeCCCee
Q psy9327 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKP-----VKYCNPKHT 232 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~-----l~s~~~d~~ 232 (641)
+|.+|...|.++.|+|+|.-+++||+|+++|+||++..+.+..+... ....|+..+.++ +..|..|.+
T Consensus 224 tF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~-------~~~~gitSv~FS~SGRlLfagy~d~~ 296 (343)
T KOG0286|consen 224 TFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHD-------SIICGITSVAFSKSGRLLFAGYDDFT 296 (343)
T ss_pred eecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccC-------cccCCceeEEEcccccEEEeeecCCc
Confidence 99999999999999999999999999999999999998888777632 111233333333 456678999
Q ss_pred EEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 233 LHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 233 I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
+.+|| .+.+....+. |..+|.++..+|||..++|||=|..+.||+
T Consensus 297 c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 297 CNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred eeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 99999 5555555554 588999999999999999999888777774
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=235.74 Aligned_cols=277 Identities=16% Similarity=0.227 Sum_probs=225.8
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEEC-ccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDY-RMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~-~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
.+.+|++.|..+.|+|+|.+||+||.|..|.+|++ ...+-..++++|++.|..+.|.+|++.+++++
T Consensus 42 ~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~g------------ 109 (338)
T KOG0265|consen 42 LLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCG------------ 109 (338)
T ss_pred hcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEec------------
Confidence 46899999999999999999999999999999994 44555677789999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeeEEEEcc
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~~i~~l~~ 161 (641)
.|.+|+.||.++|+.++.+++|.+-|..++-..-|+ ++.||++|+++++||++++.++.++.
T Consensus 110 ----------------tDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~- 172 (338)
T KOG0265|consen 110 ----------------TDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE- 172 (338)
T ss_pred ----------------CCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-
Confidence 999999999999999999999999999998665565 66789999999999999999998885
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC--
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK-- 239 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~-- 239 (641)
..-.++++.|..++..+.+|+-|+.|++||++......++.||...|..+.-.. ....+.+-+.|.++++||.+
T Consensus 173 ~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~----~gs~llsnsMd~tvrvwd~rp~ 248 (338)
T KOG0265|consen 173 NKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSR----YGSFLLSNSMDNTVRVWDVRPF 248 (338)
T ss_pred cceeEEEEEecccccceeeccccCceeeeccccCcceEEeecccCceeeEEecc----CCCccccccccceEEEEEeccc
Confidence 456799999999999999999999999999999999999999887776544211 01114455689999999933
Q ss_pred --Ccc-eeeecC-----CcceEEEEEcCCccEEEEecCCeEEEEEcCCC-CeEeccccc-----eEEEEEcCcEEEEEeC
Q psy9327 240 --MEP-LCNIHE-----NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH-GIIRTLDLP-----IYITKIKGNQVYYLDR 305 (641)
Q Consensus 240 --~~~-~~~~~~-----~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~-g~I~~~d~p-----~~~~~~~g~~v~~~~~ 305 (641)
... +..+.. ......++|+|++.++..|+.|..+++|+.-. +.+..|.-- ...++.....+.+++.
T Consensus 249 ~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~s 328 (338)
T KOG0265|consen 249 APSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCSS 328 (338)
T ss_pred CCCCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEEecc
Confidence 222 333321 45567789999999999999999999988655 455544321 2225667788888888
Q ss_pred CCCeEEEE
Q psy9327 306 ECSPHVLR 313 (641)
Q Consensus 306 dg~i~v~~ 313 (641)
|.+++.=.
T Consensus 329 dk~i~lge 336 (338)
T KOG0265|consen 329 DKTIYLGE 336 (338)
T ss_pred CceeEeec
Confidence 88877533
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-28 Score=229.60 Aligned_cols=263 Identities=16% Similarity=0.256 Sum_probs=214.9
Q ss_pred CeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCC
Q psy9327 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDY 101 (641)
Q Consensus 22 ~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg 101 (641)
-+|+++|.|.+||+|...+|.+.++++-.++.|+.+...|++..|++++ ..
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~-----------------------------~q 61 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAG-----------------------------NQ 61 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhcc-----------------------------CC
Confidence 4789999999999999999999999998899999999999999999996 67
Q ss_pred eEEEEECCCCe--eEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEE
Q psy9327 102 KIKVWNYKQRK--CIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVV 179 (641)
Q Consensus 102 ~I~vWD~~t~~--~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lv 179 (641)
.|++||++++. ++.+|.+|...|.++.|+.+|+|+++||+||+++|||++...|.+.+. |..+|+++..||+...|+
T Consensus 62 hvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteLi 140 (311)
T KOG0315|consen 62 HVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTELI 140 (311)
T ss_pred eeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecCCcceEE
Confidence 89999999875 689999999999999999999999999999999999999988777776 889999999999999999
Q ss_pred EEeCCCeEEEEecCCCceeeec-cCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC-------Ccceeeec-CCc
Q psy9327 180 SASLDQTIRVWDISGLRKKNVA-PGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK-------MEPLCNIH-ENT 250 (641)
Q Consensus 180 Sgs~DgtI~IWD~~~~~~~~~~-~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~-------~~~~~~~~-~~~ 250 (641)
+|..+|.|++||+....+...+ |.....+.++.. +|- ..-++.+...|...+|+.- ++++..+. +..
T Consensus 141 s~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v-~~d---gsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~ 216 (311)
T KOG0315|consen 141 SGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTV-MPD---GSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNG 216 (311)
T ss_pred eecCCCcEEEEEccCCccccccCCCCCcceeeEEE-cCC---CcEEEEecCCccEEEEEccCCCccccceEhhheecccc
Confidence 9999999999999887655544 333333433221 110 0116677789999999922 23333333 477
Q ss_pred ceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe---ccccc-----eEEEEEcCcEEEEEeCCCCeEEEEeCCcch
Q psy9327 251 RVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR---TLDLP-----IYITKIKGNQVYYLDRECSPHVLRIDPTEF 319 (641)
Q Consensus 251 ~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~---~~d~p-----~~~~~~~g~~v~~~~~dg~i~v~~~~~~~~ 319 (641)
.+..+-++|++++|+++|.|..+.||+.++- ++ .++.- --++..++..+++++.|+.++.|....++.
T Consensus 217 ~il~C~lSPd~k~lat~ssdktv~iwn~~~~-~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~ 292 (311)
T KOG0315|consen 217 HILRCLLSPDVKYLATCSSDKTVKIWNTDDF-FKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKE 292 (311)
T ss_pred eEEEEEECCCCcEEEeecCCceEEEEecCCc-eeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCce
Confidence 8999999999999999999999999998875 21 11111 113567899999999999999999987663
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-27 Score=244.45 Aligned_cols=287 Identities=17% Similarity=0.268 Sum_probs=235.0
Q ss_pred ceeeccCCCCeEEEEEccCCC-eEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 2 LTKFETKSARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
+.++.||+.+|++++|-|.++ ++++|+.|++|-+|+-..-+.-.+++.|+.-|.|+.|+|||..|++.+
T Consensus 140 vGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~g---------- 209 (603)
T KOG0318|consen 140 VGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAG---------- 209 (603)
T ss_pred cceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEec----------
Confidence 457899999999999999988 689999999999999766666777889999999999999999999998
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc---cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL---GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~---~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~ 157 (641)
.||+|.+||-++|+.+..+. +|.+.|.+++|+||+..|+++|.|.+++|||+.+++++.
T Consensus 210 ------------------sDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~ 271 (603)
T KOG0318|consen 210 ------------------SDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVS 271 (603)
T ss_pred ------------------CCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEE
Confidence 99999999999999999998 899999999999999999999999999999998764332
Q ss_pred -------------------------------------------EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 158 -------------------------------------------VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 158 -------------------------------------------~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
++.||...|+++..+|++..|+|||.||.|.-||..+
T Consensus 272 t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~ 351 (603)
T KOG0318|consen 272 TWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGS 351 (603)
T ss_pred EeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCC
Confidence 3468999999999999999999999999999999988
Q ss_pred Cceeeec-cCCCceeeecccCCC-----------ceee----------------------------------e-------
Q psy9327 195 LRKKNVA-PGMGKLVLSMKSKHP-----------IWKY----------------------------------C------- 221 (641)
Q Consensus 195 ~~~~~~~-~~~~~~v~s~~~~~~-----------v~~~----------------------------------~------- 221 (641)
+..-... .+|...+.+|..... ++.+ +
T Consensus 352 g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l 431 (603)
T KOG0318|consen 352 GTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLL 431 (603)
T ss_pred ccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEE
Confidence 7765443 234333333221110 0000 0
Q ss_pred ------------------------eeeeeeCCCeeEEEecCCCc----ceeeecCCcceEEEEEcCCccEEEEecCCeEE
Q psy9327 222 ------------------------KPVKYCNPKHTLHICNRKME----PLCNIHENTRVKSGAWDESGVFIYTTSNHIKY 273 (641)
Q Consensus 222 ------------------------~~l~s~~~d~~I~i~d~~~~----~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~ 273 (641)
..++.|+.|+.+++|...+. ......+..+|++++++||+.+|+++...+++
T Consensus 432 ~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkv 511 (603)
T KOG0318|consen 432 QDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKV 511 (603)
T ss_pred ecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcE
Confidence 00566778999999995442 23445678999999999999999999999999
Q ss_pred EEEcCCCCeEecccc-------ceEEEEEcCcEEEEEeCCCCeEEEEeCC
Q psy9327 274 AIVNGDHGIIRTLDL-------PIYITKIKGNQVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 274 ~l~~~~~g~I~~~d~-------p~~~~~~~g~~v~~~~~dg~i~v~~~~~ 316 (641)
.+|+..++.+..-.. ....|.++..++.+++-|..+.+|.++.
T Consensus 512 v~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~k 561 (603)
T KOG0318|consen 512 VLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKK 561 (603)
T ss_pred EEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccC
Confidence 999987776542211 2344778889999999999999999885
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-29 Score=256.31 Aligned_cols=278 Identities=16% Similarity=0.216 Sum_probs=223.4
Q ss_pred CceeeccCCCCeEEEEEcc-CCCeEEEEeCCCcEEEEECcc-CcccccccccccCeEEEEEeCCCCEEEEeceeeEEeee
Q psy9327 1 MLTKFETKSARVKGLSFHP-KRPWILSSLHNGVIQLWDYRM-NTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~-~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~ 78 (641)
++..|.||...|+++.|.| .+.+|++|+.|+.|+||++.. +.++++|.+|..+|+.++|+++|..|++++
T Consensus 206 ~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~s-------- 277 (503)
T KOG0282|consen 206 LSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSAS-------- 277 (503)
T ss_pred heeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeee--------
Confidence 4678999999999999999 899999999999999999866 889999999999999999999999999998
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEECCCCeeEE
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRNCIC 157 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~I~vWd~~~~~~i~ 157 (641)
.|+.|++||.++|+++..|. -...+.|+.|+|++ +.|++|+.|+.|+.||+++++.++
T Consensus 278 --------------------fD~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvq 336 (503)
T KOG0282|consen 278 --------------------FDRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQ 336 (503)
T ss_pred --------------------cceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHH
Confidence 99999999999999999986 34577899999998 788999999999999999999999
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC---CceeeecccCCCceeeeeeeeeeCCCeeEE
Q psy9327 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM---GKLVLSMKSKHPIWKYCKPVKYCNPKHTLH 234 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~---~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~ 234 (641)
.+..|.+.|.++.|-++|..++|+|+|++++||+++..-.+...... ..+.+.+....+ | ++.-+.++.+.
T Consensus 337 eYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~-~-----~~aQs~dN~i~ 410 (503)
T KOG0282|consen 337 EYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGK-W-----FAAQSMDNYIA 410 (503)
T ss_pred HHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCC-e-----ehhhccCceEE
Confidence 99999999999999999999999999999999999887665544322 222222122222 1 33344677777
Q ss_pred EecCC----Ccceeeec---CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe----EeccccceEE--EEE-cCcEE
Q psy9327 235 ICNRK----MEPLCNIH---ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI----IRTLDLPIYI--TKI-KGNQV 300 (641)
Q Consensus 235 i~d~~----~~~~~~~~---~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~----I~~~d~p~~~--~~~-~g~~v 300 (641)
++... ...-..+. ..+.-..+.|+|||.+|++|+.+|++++|+-.+-. +..-+.|+.. |++ ....|
T Consensus 411 ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skv 490 (503)
T KOG0282|consen 411 IFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKV 490 (503)
T ss_pred EEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCccee
Confidence 77621 11111121 24556779999999999999999999999865432 2233444433 444 35788
Q ss_pred EEEeCCCCeEEEE
Q psy9327 301 YYLDRECSPHVLR 313 (641)
Q Consensus 301 ~~~~~dg~i~v~~ 313 (641)
++++-+|.|++|.
T Consensus 491 at~~w~G~Ikiwd 503 (503)
T KOG0282|consen 491 ATCGWDGLIKIWD 503 (503)
T ss_pred EecccCceeEecC
Confidence 9999999999994
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-28 Score=265.16 Aligned_cols=247 Identities=23% Similarity=0.403 Sum_probs=212.4
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEEC-ccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDY-RMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~-~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
++.+.+|...|.+++|+|++.++++|+.|++|+|||+ ..+..++++.+|...|++++|+|+++.+++|+
T Consensus 196 ~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs---------- 265 (456)
T KOG0266|consen 196 LRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGS---------- 265 (456)
T ss_pred hccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEec----------
Confidence 4567899999999999999999999999999999999 55688999999999999999999999999998
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe--eEEE
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN--CICV 158 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~--~i~~ 158 (641)
.|++|++||+++++++..+.+|.+.|++++|++++.+|++++.|+.|++||+.++. +...
T Consensus 266 ------------------~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~ 327 (456)
T KOG0266|consen 266 ------------------DDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKL 327 (456)
T ss_pred ------------------CCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeec
Confidence 99999999999999999999999999999999999999999999999999999999 6788
Q ss_pred EccCCCC--EEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCcee-eeeeeeeeCCCeeEEE
Q psy9327 159 LTGHNHY--VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWK-YCKPVKYCNPKHTLHI 235 (641)
Q Consensus 159 l~~h~~~--V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~-~~~~l~s~~~d~~I~i 235 (641)
+.++... +++++|+|++.++++++.|+++++||++.+.......+|...+.+.. .++.. ....+.++..|+.|.+
T Consensus 328 ~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~sg~~d~~v~~ 405 (456)
T KOG0266|consen 328 LSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIF--SPTLSTGGKLIYSGSEDGSVYV 405 (456)
T ss_pred ccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEe--cccccCCCCeEEEEeCCceEEE
Confidence 8877766 99999999999999999999999999999999988887754432211 11111 1112677889999999
Q ss_pred ecCC-CcceeeecC--CcceEEEEEcCCccEEEEec--CCeEEEEEcC
Q psy9327 236 CNRK-MEPLCNIHE--NTRVKSGAWDESGVFIYTTS--NHIKYAIVNG 278 (641)
Q Consensus 236 ~d~~-~~~~~~~~~--~~~I~sla~~p~g~~L~t~s--~~~k~~l~~~ 278 (641)
||.. +..+..+.. ...+..++|++...++++.+ .|+.+.+|..
T Consensus 406 ~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~ 453 (456)
T KOG0266|consen 406 WDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKY 453 (456)
T ss_pred EeCCccchhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecC
Confidence 9944 544444443 57889999999999999987 6777777754
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-26 Score=238.65 Aligned_cols=314 Identities=15% Similarity=0.201 Sum_probs=252.1
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc--cccccccccCeEEEEEeCCCCEEEEeceeeE------
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL--LEKFDEHEGPVRGICFHNQQPIFVSGGKMIV------ 74 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~--l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~------ 74 (641)
..|.+|...++-..|||.|.|+|+|...|.|||||....+. ..+|+.-.++|..|+|++++..+++.|+...
T Consensus 53 ~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F 132 (603)
T KOG0318|consen 53 DIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVF 132 (603)
T ss_pred eeeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEE
Confidence 46889999999999999999999999999999999866443 3456778999999999999999888874321
Q ss_pred -----------EeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCC
Q psy9327 75 -----------MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ 143 (641)
Q Consensus 75 -----------~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg 143 (641)
.++.-.+.+....|..+...+++++|++|.+|+-.-.+...++..|..-|.++.|+|||..|++++.||
T Consensus 133 ~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDg 212 (603)
T KOG0318|consen 133 LWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDG 212 (603)
T ss_pred EecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCc
Confidence 122235677788999999999999999999999887788888999999999999999999999999999
Q ss_pred eEEEEECCCCeeEEEEc---cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceee
Q psy9327 144 TIRIWYWQSRNCICVLT---GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKY 220 (641)
Q Consensus 144 ~I~vWd~~~~~~i~~l~---~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~ 220 (641)
+|.+||=.+++.+..+. +|.+.|.+++|+||+..++|+|.|.+++|||..+.+..++++-..+ +.. ..-.-+|.
T Consensus 213 ki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~-v~d-qqvG~lWq- 289 (603)
T KOG0318|consen 213 KIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGST-VED-QQVGCLWQ- 289 (603)
T ss_pred cEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCc-hhc-eEEEEEEe-
Confidence 99999999999999997 9999999999999999999999999999999999998888873221 110 00011222
Q ss_pred eeeeeeeCCCeeEEEecC-CCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEecc-----ccceEEE
Q psy9327 221 CKPVKYCNPKHTLHICNR-KMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTL-----DLPIYIT 293 (641)
Q Consensus 221 ~~~l~s~~~d~~I~i~d~-~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~-----d~p~~~~ 293 (641)
-..+.+.+.+|.+.+++. ....+..+. |...|++++.+|++.+|++++.||.+.-|+...|.-..+ ..-+...
T Consensus 290 kd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~ 369 (603)
T KOG0318|consen 290 KDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGM 369 (603)
T ss_pred CCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEE
Confidence 122778889999999993 334444443 588999999999999999999999999998766653322 1112222
Q ss_pred EE-cCcEEEEEeCCCCeEEEEeCCcch
Q psy9327 294 KI-KGNQVYYLDRECSPHVLRIDPTEF 319 (641)
Q Consensus 294 ~~-~g~~v~~~~~dg~i~v~~~~~~~~ 319 (641)
.. +...+++.+-|.++++..+....|
T Consensus 370 ~~~~~~~~~t~g~Dd~l~~~~~~~~~~ 396 (603)
T KOG0318|consen 370 AASESGELFTIGWDDTLRVISLKDNGY 396 (603)
T ss_pred eecCCCcEEEEecCCeEEEEecccCcc
Confidence 23 347889999999999987754433
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.1e-27 Score=248.28 Aligned_cols=309 Identities=15% Similarity=0.265 Sum_probs=257.7
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeC-CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLH-NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~-dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
|++.+.--..+|..++|+..|+|+|.|+. -|.+-+|++++..-+.+.++|...+++++++|||.++++|+
T Consensus 299 lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~--------- 369 (893)
T KOG0291|consen 299 LIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGA--------- 369 (893)
T ss_pred EEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEecc---------
Confidence 35556666688999999999999999886 48999999999999999999999999999999999999998
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l 159 (641)
+||+|+|||..+|-|+.+|..|+..|+++.|+..++.++|+|.||+|+.||+...++-++|
T Consensus 370 -------------------eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTf 430 (893)
T KOG0291|consen 370 -------------------EDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTF 430 (893)
T ss_pred -------------------CCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeee
Confidence 9999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccC-CCCEEEEEEecCCCEEEEEeCCC-eEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 160 TGH-NHYVMCAQFHPTDDIVVSASLDQ-TIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 160 ~~h-~~~V~sl~fsp~g~~lvSgs~Dg-tI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
... .-...|++..|.|.++..|+.|. .|.+|++++|+.+..+.||..+|.++.. .|.-. .+++++-|.+|++||
T Consensus 431 t~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f-~~~~~---~LaS~SWDkTVRiW~ 506 (893)
T KOG0291|consen 431 TSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSF-SPDGS---LLASGSWDKTVRIWD 506 (893)
T ss_pred cCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEE-ccccC---eEEeccccceEEEEE
Confidence 743 23457888899999999999987 6999999999999999999988876331 11111 278999999999999
Q ss_pred --CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe-cccc-----------------------ceE
Q psy9327 238 --RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR-TLDL-----------------------PIY 291 (641)
Q Consensus 238 --~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~-~~d~-----------------------p~~ 291 (641)
.+......+.....+.+++|.|+|.-++..+-+|.+-+|+...+.-. .+|. ++.
T Consensus 507 if~s~~~vEtl~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ft 586 (893)
T KOG0291|consen 507 IFSSSGTVETLEIRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFT 586 (893)
T ss_pred eeccCceeeeEeeccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceE
Confidence 44456777788889999999999999999999999999987654322 2211 111
Q ss_pred --EEEEcCcEEEEEeCCCCeEEEEeCCcchhhhHHHhc-cchHHHHHHHhcCc
Q psy9327 292 --ITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALIN-HKYEEVLHIVRNSR 341 (641)
Q Consensus 292 --~~~~~g~~v~~~~~dg~i~v~~~~~~~~~~k~~l~~-~~~~~~l~~~~~s~ 341 (641)
....+|..+.++.....+.++.+.++....+..+.. ..++.+++++...+
T Consensus 587 ti~ySaDG~~IlAgG~sn~iCiY~v~~~vllkkfqiS~N~sLdg~~efln~rk 639 (893)
T KOG0291|consen 587 TICYSADGKCILAGGESNSICIYDVPEGVLLKKFQISDNRSLDGVLEFLNRRK 639 (893)
T ss_pred EEEEcCCCCEEEecCCcccEEEEECchhheeeeEEeccccchhHHHHHhcccc
Confidence 133678888888888999999999887776666643 44666777665533
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=223.91 Aligned_cols=245 Identities=18% Similarity=0.281 Sum_probs=198.6
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
++.+.+|.++|..+.|+-+|+|.++++.|.+|++|+...|.+++++.+|...|..++.+.|+..|++||
T Consensus 10 ~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~G----------- 78 (307)
T KOG0316|consen 10 LSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCG----------- 78 (307)
T ss_pred ceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCC-----------
Confidence 356789999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC--eeEEEE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR--NCICVL 159 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~--~~i~~l 159 (641)
.|..|++||+++|+.++.|.+|.+.|..++|+.+...++|||.|.++++||.+++ ++++.+
T Consensus 79 -----------------gDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQil 141 (307)
T KOG0316|consen 79 -----------------GDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQIL 141 (307)
T ss_pred -----------------CCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchh
Confidence 9999999999999999999999999999999999999999999999999999875 588999
Q ss_pred ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC
Q psy9327 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK 239 (641)
Q Consensus 160 ~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~ 239 (641)
....+.|.++..+ +..|+.||.||++|.||++.++...-.-
T Consensus 142 dea~D~V~Si~v~--~heIvaGS~DGtvRtydiR~G~l~sDy~------------------------------------- 182 (307)
T KOG0316|consen 142 DEAKDGVSSIDVA--EHEIVAGSVDGTVRTYDIRKGTLSSDYF------------------------------------- 182 (307)
T ss_pred hhhcCceeEEEec--ccEEEeeccCCcEEEEEeecceeehhhc-------------------------------------
Confidence 8889999999885 7899999999999999999876533222
Q ss_pred CcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEec-c------ccceE-EEEEcCcEEEEEeCCCCeEE
Q psy9327 240 MEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRT-L------DLPIY-ITKIKGNQVYYLDRECSPHV 311 (641)
Q Consensus 240 ~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~-~------d~p~~-~~~~~g~~v~~~~~dg~i~v 311 (641)
+.+|++++|+++|++...++-++.+.+.+.++|.+.. . +.-+. ........+++++.||.+++
T Consensus 183 ---------g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~ 253 (307)
T KOG0316|consen 183 ---------GHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYF 253 (307)
T ss_pred ---------CCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCceEEE
Confidence 3556666677777666666666666666655554321 0 00000 01233456666667777777
Q ss_pred EEeCCcchhhh
Q psy9327 312 LRIDPTEFKFK 322 (641)
Q Consensus 312 ~~~~~~~~~~k 322 (641)
|++-+....-+
T Consensus 254 wdLvd~~~~sk 264 (307)
T KOG0316|consen 254 WDLVDETQISK 264 (307)
T ss_pred EEeccceeeee
Confidence 76665444333
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=234.85 Aligned_cols=245 Identities=18% Similarity=0.373 Sum_probs=217.9
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
..++.||.+.|..++||+..+|+.+++.|+.|+.||++..+.++.+-+|-..|.|++.||.-..|++|+
T Consensus 186 kltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~g----------- 254 (460)
T KOG0285|consen 186 KLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGG----------- 254 (460)
T ss_pred EEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecC-----------
Confidence 457889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~ 161 (641)
.|.+++|||+++...++++.||..+|..+.+.|.++.+++||.|++|++||++.++...++..
T Consensus 255 -----------------rDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~ 317 (460)
T KOG0285|consen 255 -----------------RDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTH 317 (460)
T ss_pred -----------------CcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeec
Confidence 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCC
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKM 240 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~ 240 (641)
|...|++++.||....++|+|.| .|+-|++..+.....+.+|...+.++..... .-+.+|+..+.+.+|| +.+
T Consensus 318 hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~nsD-----~v~~~G~dng~~~fwdwksg 391 (460)
T KOG0285|consen 318 HKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVNSD-----GVLVSGGDNGSIMFWDWKSG 391 (460)
T ss_pred ccceeeEEecCCchhhhhccCCc-cceeccCCccchhhccccccceeeeeeeccC-----ceEEEcCCceEEEEEecCcC
Confidence 99999999999999999999998 7999999998888888888777766553322 1156788999999999 444
Q ss_pred cceeee---------cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCC
Q psy9327 241 EPLCNI---------HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 241 ~~~~~~---------~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~ 280 (641)
-..... .....|.+.+||..|..|+|+..|..+.+|.-++
T Consensus 392 ~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keDe 440 (460)
T KOG0285|consen 392 HNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKEDE 440 (460)
T ss_pred cccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEeccc
Confidence 333222 2356789999999999999998888888886543
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-26 Score=245.95 Aligned_cols=282 Identities=17% Similarity=0.281 Sum_probs=238.0
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
+..|++.+||+.-+.|++|-.+|...+|++..-.+++.+.-...+|..++|+..|.|++.|+
T Consensus 265 ~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~------------------ 326 (893)
T KOG0291|consen 265 SSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGC------------------ 326 (893)
T ss_pred ccceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcC------------------
Confidence 47899999999999999999999999999999999999887889999999999999999998
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEE
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMC 168 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~s 168 (641)
+.-|++-||++.+...+.+.++|...+.+++++|||+++++|++||+|+|||.+++-|+.+|..|+..|+.
T Consensus 327 ---------~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~ 397 (893)
T KOG0291|consen 327 ---------SKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTA 397 (893)
T ss_pred ---------CccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEE
Confidence 47789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCC-CeeEEEec-CCCcceeee
Q psy9327 169 AQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNP-KHTLHICN-RKMEPLCNI 246 (641)
Q Consensus 169 l~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~-d~~I~i~d-~~~~~~~~~ 246 (641)
++|+..|+.++|+|.||+||.||+...+..+++......-.+-.+..|--.+ +..|.. .-.|.+|+ .++..+-.+
T Consensus 398 v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGel---V~AG~~d~F~IfvWS~qTGqllDiL 474 (893)
T KOG0291|consen 398 VQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGEL---VCAGAQDSFEIFVWSVQTGQLLDIL 474 (893)
T ss_pred EEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCE---EEeeccceEEEEEEEeecCeeeehh
Confidence 9999999999999999999999999988888876533221111111111110 233333 34699999 556555555
Q ss_pred c-CCcceEEEEEcCCccEEEEecCCeEEEEEcC--CCCeEeccccc----eEEEEEcCcEEEEEeCCCCeEEEEeCCcch
Q psy9327 247 H-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNG--DHGIIRTLDLP----IYITKIKGNQVYYLDRECSPHVLRIDPTEF 319 (641)
Q Consensus 247 ~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~--~~g~I~~~d~p----~~~~~~~g~~v~~~~~dg~i~v~~~~~~~~ 319 (641)
. |.++|.+++|+|.|..|+++|-|..+.+|+. ..+++.+++.+ -..++++|..+..+.-||.+.+|+......
T Consensus 475 sGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q 554 (893)
T KOG0291|consen 475 SGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLEIRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQ 554 (893)
T ss_pred cCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEeeccceeEEEEcCCCCeEEEEEecceEEEEEhhhcee
Confidence 4 4789999999999999999999999999984 45577777654 233778899999999999999998886555
Q ss_pred h
Q psy9327 320 K 320 (641)
Q Consensus 320 ~ 320 (641)
+
T Consensus 555 ~ 555 (893)
T KOG0291|consen 555 V 555 (893)
T ss_pred e
Confidence 4
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-28 Score=237.27 Aligned_cols=265 Identities=22% Similarity=0.323 Sum_probs=222.9
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
+..|.|+.+. ...+++|..|++|+|||..+..++..+.+|++.|.|+.|.. +.+++|+
T Consensus 197 skgVYClQYD--D~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~--rviisGS------------------ 254 (499)
T KOG0281|consen 197 SKGVYCLQYD--DEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDE--RVIVSGS------------------ 254 (499)
T ss_pred CCceEEEEec--chhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccc--eEEEecC------------------
Confidence 4679999985 34589999999999999999999999999999999999954 4888887
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe---eEEEEccCCCC
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN---CICVLTGHNHY 165 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~---~i~~l~~h~~~ 165 (641)
.|.+|+|||+++|+++.++-+|.+.|-.+.|+. .+++++|.|.+|.+||+.+.. +.+.+.||...
T Consensus 255 ----------SDsTvrvWDv~tge~l~tlihHceaVLhlrf~n--g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAa 322 (499)
T KOG0281|consen 255 ----------SDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSN--GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAA 322 (499)
T ss_pred ----------CCceEEEEeccCCchhhHHhhhcceeEEEEEeC--CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhh
Confidence 999999999999999999999999999999974 579999999999999998765 44667899999
Q ss_pred EEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCccee
Q psy9327 166 VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLC 244 (641)
Q Consensus 166 V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~ 244 (641)
|..+.|+ .++++|+|.|.+|++|++.+++.+.++.+|...+.|+...... +.+|++|.+|++|| ..+.++.
T Consensus 323 VNvVdfd--~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQYr~rl------vVSGSSDntIRlwdi~~G~cLR 394 (499)
T KOG0281|consen 323 VNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL------VVSGSSDNTIRLWDIECGACLR 394 (499)
T ss_pred eeeeccc--cceEEEecCCceEEEEeccceeeehhhhcccccceehhccCeE------EEecCCCceEEEEeccccHHHH
Confidence 9999995 6699999999999999999999999999998888886655543 77899999999999 5566665
Q ss_pred eecC-CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe--------E--ecc-cc--ceEEEEEcCcEEEEEeCCCCeE
Q psy9327 245 NIHE-NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI--------I--RTL-DL--PIYITKIKGNQVYYLDRECSPH 310 (641)
Q Consensus 245 ~~~~-~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~--------I--~~~-d~--p~~~~~~~g~~v~~~~~dg~i~ 310 (641)
.+.. ..-|.++.|+. +.+++|.-||++.+|+...+. + +.+ +. -++-...+.-++++.+.|.+|.
T Consensus 395 vLeGHEeLvRciRFd~--krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD~fqIvsssHddtIL 472 (499)
T KOG0281|consen 395 VLEGHEELVRCIRFDN--KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTIL 472 (499)
T ss_pred HHhchHHhhhheeecC--ceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeecceEEEeccCCCeEE
Confidence 5554 56788999975 589999999999999854432 1 111 11 1444556778899999999999
Q ss_pred EEEeCCc
Q psy9327 311 VLRIDPT 317 (641)
Q Consensus 311 v~~~~~~ 317 (641)
+|++.++
T Consensus 473 iWdFl~~ 479 (499)
T KOG0281|consen 473 IWDFLNG 479 (499)
T ss_pred EEEcCCC
Confidence 9999864
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=235.56 Aligned_cols=244 Identities=23% Similarity=0.389 Sum_probs=219.4
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECcc-CcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRM-NTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~-~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
.+.++||.+.|.+++|+..|.++++++.|=.+++||.++ -++++...+|+..|.++.|-|.|.++++++
T Consensus 143 e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~s---------- 212 (406)
T KOG0295|consen 143 ERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCS---------- 212 (406)
T ss_pred hhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecc----------
Confidence 457899999999999999999999999999999999876 567777889999999999999999999998
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~ 160 (641)
.|.+|+.|++.+|-++.+|.+|..-|+.++.+.||.++++++.|.++++|-+.+++|...++
T Consensus 213 ------------------rD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR 274 (406)
T KOG0295|consen 213 ------------------RDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELR 274 (406)
T ss_pred ------------------cccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEEecC----------C-----CEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeee
Q psy9327 161 GHNHYVMCAQFHPT----------D-----DIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVK 225 (641)
Q Consensus 161 ~h~~~V~sl~fsp~----------g-----~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~ 225 (641)
+|..+|-|++|-|. + ..+.++|.|++|++||++++.++-++.+|+..|..+. ++|--.+ +.
T Consensus 275 ~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~a-f~p~Gky---i~ 350 (406)
T KOG0295|consen 275 EHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVA-FSPGGKY---IL 350 (406)
T ss_pred ccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeE-EcCCCeE---EE
Confidence 99999999999772 2 4899999999999999999999999999999988743 4433333 66
Q ss_pred eeCCCeeEEEec-CCCcceeeecC-CcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 226 YCNPKHTLHICN-RKMEPLCNIHE-NTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 226 s~~~d~~I~i~d-~~~~~~~~~~~-~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
++..|+++++|| ++..+...... ..-++++.|+.+-.++.||+-+....+|.
T Consensus 351 ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 351 SCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred EEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccceeeeee
Confidence 788999999999 66777766654 77899999999999999999888877774
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-26 Score=267.48 Aligned_cols=275 Identities=13% Similarity=0.210 Sum_probs=219.6
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC----c----ccccccccccCeEEEEEeC-CCCEEEEeceeeEE
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN----T----LLEKFDEHEGPVRGICFHN-QQPIFVSGGKMIVM 75 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~----~----~l~~~~~h~~~V~~i~fsp-~~~~l~sgs~~~~~ 75 (641)
+..|.+.|.+++|+|+|+++|+|+.||.|+|||..+. . ....+ .+...|.+++|+| ++.++++++
T Consensus 479 ~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~~las~~----- 552 (793)
T PLN00181 479 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVEL-ASRSKLSGICWNSYIKSQVASSN----- 552 (793)
T ss_pred ccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEe-cccCceeeEEeccCCCCEEEEEe-----
Confidence 4569999999999999999999999999999997542 1 11122 2456899999987 477888887
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCe
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQSRN 154 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~~~~ 154 (641)
.||+|++||+.+++.+..+.+|.+.|.+++|+| ++.+|++|+.|++|++||++++.
T Consensus 553 -----------------------~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~ 609 (793)
T PLN00181 553 -----------------------FEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV 609 (793)
T ss_pred -----------------------CCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCc
Confidence 999999999999999999999999999999997 77899999999999999999999
Q ss_pred eEEEEccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEecCCCc-eeeeccCCCceeeecccCCCceeeeeeeeeeCCCee
Q psy9327 155 CICVLTGHNHYVMCAQFHP-TDDIVVSASLDQTIRVWDISGLR-KKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHT 232 (641)
Q Consensus 155 ~i~~l~~h~~~V~sl~fsp-~g~~lvSgs~DgtI~IWD~~~~~-~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~ 232 (641)
++..+..| ..|.++.|++ ++..+++|+.||+|++||+++.+ ....+.+|...+.++....+ ..+++++.|+.
T Consensus 610 ~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~-----~~lvs~s~D~~ 683 (793)
T PLN00181 610 SIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDS-----STLVSSSTDNT 683 (793)
T ss_pred EEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEeCC-----CEEEEEECCCE
Confidence 99888755 6799999965 68999999999999999998765 35566677766665543221 22678889999
Q ss_pred EEEecCC-------Ccceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecc--------------c--
Q psy9327 233 LHICNRK-------MEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTL--------------D-- 287 (641)
Q Consensus 233 I~i~d~~-------~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~--------------d-- 287 (641)
|++||.. ...+..+. +...+.+++|+|++.++++|+.++.+.+|+..... +..+ +
T Consensus 684 ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 763 (793)
T PLN00181 684 LKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDAS 763 (793)
T ss_pred EEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCC
Confidence 9999943 23344443 36678899999999999999999999999854331 1100 0
Q ss_pred c--ceEEEEEcCcEEEEEeCCCCeEEEEe
Q psy9327 288 L--PIYITKIKGNQVYYLDRECSPHVLRI 314 (641)
Q Consensus 288 ~--p~~~~~~~g~~v~~~~~dg~i~v~~~ 314 (641)
. ....+..++..+++++.||.+++|++
T Consensus 764 ~~V~~v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 764 QFISSVCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred cEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence 0 11225567889999999999999975
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-27 Score=238.26 Aligned_cols=244 Identities=18% Similarity=0.303 Sum_probs=217.4
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
++.+|..|+++|.++.|+.+|.+|++++.||++.+||..+|+....|..|+.+-..+.|-.+. -|++++
T Consensus 268 l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~-~F~ts~---------- 336 (524)
T KOG0273|consen 268 LISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSND-EFATSS---------- 336 (524)
T ss_pred hhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCc-eEeecC----------
Confidence 356788999999999999999999999999999999999999999999999998889997665 456665
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~ 160 (641)
.|+.|+|+.+...+++.++.+|.++|.++.|.|.+.+|+|+|+|++++||+.....+...|.
T Consensus 337 ------------------td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~ 398 (524)
T KOG0273|consen 337 ------------------TDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQ 398 (524)
T ss_pred ------------------CCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhh
Confidence 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEEecCC---------CEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCe
Q psy9327 161 GHNHYVMCAQFHPTD---------DIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKH 231 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g---------~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~ 231 (641)
+|...|.++.|+|.| ..+++++.|++|++||+..+.++.++..|..+|++++..+.-- -+++|+.|+
T Consensus 399 ~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~----ylAsGs~dg 474 (524)
T KOG0273|consen 399 AHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGR----YLASGSLDG 474 (524)
T ss_pred hhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCc----EEEecCCCC
Confidence 999999999999965 3799999999999999999999999998888888766443211 178999999
Q ss_pred eEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 232 TLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 232 ~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
.|.+|+ +.++.+.....+..|..++|+.+|.++..+-.++.+++.+
T Consensus 475 ~V~iws~~~~~l~~s~~~~~~Ifel~Wn~~G~kl~~~~sd~~vcvld 521 (524)
T KOG0273|consen 475 CVHIWSTKTGKLVKSYQGTGGIFELCWNAAGDKLGACASDGSVCVLD 521 (524)
T ss_pred eeEeccccchheeEeecCCCeEEEEEEcCCCCEEEEEecCCCceEEE
Confidence 999999 6677778888888999999999999998877766666543
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-28 Score=236.88 Aligned_cols=237 Identities=25% Similarity=0.376 Sum_probs=202.5
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
++.+.||++.|.|+.|. .+.+++|+.|.+|++||+++|+++.++-.|...|..+.|+.. ++++++
T Consensus 230 ~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~ng--~mvtcS----------- 294 (499)
T KOG0281|consen 230 LKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSNG--YMVTCS----------- 294 (499)
T ss_pred HHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeCC--EEEEec-----------
Confidence 46788999999999995 458999999999999999999999999999999999999754 888887
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCe---eEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRK---CIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~---~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
.|.+|.|||+.... +.+.+.||...|..+.|+. ++++|+|.|.+|++|+..+.+++.+
T Consensus 295 -----------------kDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~--kyIVsASgDRTikvW~~st~efvRt 355 (499)
T KOG0281|consen 295 -----------------KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRT 355 (499)
T ss_pred -----------------CCceeEEEeccCchHHHHHHHHhhhhhheeeecccc--ceEEEecCCceEEEEeccceeeehh
Confidence 99999999997653 3456789999999999964 5999999999999999999999999
Q ss_pred EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~ 238 (641)
+.||...|-|+++ .|++++|||.|.+||+||+..|.+...+.||...|.++.....- +.+|..||.|++||.
T Consensus 356 l~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd~kr------IVSGaYDGkikvWdl 427 (499)
T KOG0281|consen 356 LNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR------IVSGAYDGKIKVWDL 427 (499)
T ss_pred hhcccccceehhc--cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeecCce------eeeccccceEEEEec
Confidence 9999999999988 49999999999999999999999999999998888776544332 678899999999993
Q ss_pred C--Ccc--------ee-eecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe
Q psy9327 239 K--MEP--------LC-NIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI 282 (641)
Q Consensus 239 ~--~~~--------~~-~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~ 282 (641)
. ..+ +. ...++++|..+.||.- .+++++.+..+.+|+-.++.
T Consensus 428 ~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD~f--qIvsssHddtILiWdFl~~~ 480 (499)
T KOG0281|consen 428 QAALDPRAPASTLCLRTLVEHSGRVFRLQFDEF--QIISSSHDDTILIWDFLNGP 480 (499)
T ss_pred ccccCCcccccchHHHhhhhccceeEEEeecce--EEEeccCCCeEEEEEcCCCC
Confidence 2 221 22 2234779999999854 67787888888888876654
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.4e-26 Score=215.62 Aligned_cols=233 Identities=16% Similarity=0.355 Sum_probs=190.9
Q ss_pred ccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC--cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN--TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~--~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
++|+..|.+++|+|.|++|++|+.|.++.||.-..+ +++..+++|...|+|++|+++|.+||+++
T Consensus 58 ~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCS------------- 124 (312)
T KOG0645|consen 58 DGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCS------------- 124 (312)
T ss_pred ccchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEee-------------
Confidence 479999999999999999999999999999986543 67899999999999999999999999998
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCC---eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC---CCeeEE
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQR---KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ---SRNCIC 157 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~---~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~---~~~~i~ 157 (641)
.|..|.||.+..+ .+...+++|...|..+.|||...+|+|+|-|.+|++|+-. .-.|..
T Consensus 125 ---------------RDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~ 189 (312)
T KOG0645|consen 125 ---------------RDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQ 189 (312)
T ss_pred ---------------CCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEE
Confidence 9999999998754 5788899999999999999999999999999999999866 346899
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC-CCceeeecccCCCceeeeeeeeeeCCCeeEEEe
Q psy9327 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG-MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~-~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~ 236 (641)
++.+|...|.+++|+|.|..++++++|++++||-..+ .+++ |...++.+. |. ...++++..|+.|+++
T Consensus 190 tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~-----~~~~~~sr~~Y~v~-----W~-~~~IaS~ggD~~i~lf 258 (312)
T KOG0645|consen 190 TLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYT-----DLSGMHSRALYDVP-----WD-NGVIASGGGDDAIRLF 258 (312)
T ss_pred EecCccceEEEEEecCCCceEEEecCCcceEeeeecc-----CcchhcccceEeee-----ec-ccceEeccCCCEEEEE
Confidence 9999999999999999999999999999999997542 2222 122333222 11 2337889999999999
Q ss_pred cCCCc---c----ee--eecCCcceEEEEEcCC-ccEEEEecCCeEEEEEc
Q psy9327 237 NRKME---P----LC--NIHENTRVKSGAWDES-GVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 237 d~~~~---~----~~--~~~~~~~I~sla~~p~-g~~L~t~s~~~k~~l~~ 277 (641)
..... + +. ...|...|++++|+|. ...|+++++||.+.+|.
T Consensus 259 ~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~ 309 (312)
T KOG0645|consen 259 KESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWE 309 (312)
T ss_pred EecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEE
Confidence 74321 1 11 1124569999999995 67788877666666664
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-25 Score=223.61 Aligned_cols=244 Identities=24% Similarity=0.408 Sum_probs=209.9
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+..+..|...+.++.|+|+++++++++.||.|++||+.+++.+..+..|...|.++.|+|++.++++++
T Consensus 44 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------- 112 (289)
T cd00200 44 LRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSS----------- 112 (289)
T ss_pred EEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEec-----------
Confidence 356788999999999999999999999999999999998888888989999999999999988888886
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~ 161 (641)
.|+.|.+||+.+++....+..|.+.+.+++|+|++.++++++.|+.|++||+++++.+..+..
T Consensus 113 -----------------~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~ 175 (289)
T cd00200 113 -----------------RDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTG 175 (289)
T ss_pred -----------------CCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEec
Confidence 799999999999999999999999999999999999999888899999999999999999999
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC-C
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK-M 240 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~-~ 240 (641)
|...+.++.|+|++..+++++.|+.+++||+++++....+..+...+.++..... ..-+.+++.++.+.+||.. .
T Consensus 176 ~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~i~i~~~~~~ 251 (289)
T cd00200 176 HTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPD----GYLLASGSEDGTIRVWDLRTG 251 (289)
T ss_pred CccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCC----CcEEEEEcCCCcEEEEEcCCc
Confidence 9999999999999999999999999999999998888777666555555432221 1114455569999999944 4
Q ss_pred cceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 241 EPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 241 ~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
.....+. +...+.+++|+|++..+++++.++.+.+|+
T Consensus 252 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 252 ECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred eeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 5544444 356899999999999999999988888874
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-25 Score=211.65 Aligned_cols=252 Identities=17% Similarity=0.293 Sum_probs=203.7
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc--ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT--LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~--~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
++++...+.|+.|...|++..||+++. ..||+||+++++ ++.+|++|...|..+.|+.+|+|+++|+
T Consensus 34 rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgs---------- 102 (311)
T KOG0315|consen 34 RTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGS---------- 102 (311)
T ss_pred EEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecC----------
Confidence 566667789999999999999999886 579999998765 5889999999999999999999999998
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~ 160 (641)
+||+++|||++...+.+.++ |..+|+++..||++..|++|..+|.|++||+....|...+-
T Consensus 103 ------------------eDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~li 163 (311)
T KOG0315|consen 103 ------------------EDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELI 163 (311)
T ss_pred ------------------CCceEEEEeccCcccchhcc-CCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccC
Confidence 99999999999976666665 88999999999999999999999999999999988877764
Q ss_pred -cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceee------eccCCCceeeecccCCCceeeeeeeeeeCCCeeE
Q psy9327 161 -GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKN------VAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTL 233 (641)
Q Consensus 161 -~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~------~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I 233 (641)
.....|.++..+|||..++.+...|+..+|++-+..... .++.|..+++... ..|--+ -++++++|.++
T Consensus 164 Pe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~-lSPd~k---~lat~ssdktv 239 (311)
T KOG0315|consen 164 PEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCL-LSPDVK---YLATCSSDKTV 239 (311)
T ss_pred CCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEE-ECCCCc---EEEeecCCceE
Confidence 345679999999999999999999999999997644333 3334444443211 111111 17899999999
Q ss_pred EEecCCCc-cee-ee-cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecccc
Q psy9327 234 HICNRKME-PLC-NI-HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDL 288 (641)
Q Consensus 234 ~i~d~~~~-~~~-~~-~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~ 288 (641)
+||+...- ... .+ .+...++.++|+.+|.||+|+++|....+|....+. ++.++-
T Consensus 240 ~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~g 298 (311)
T KOG0315|consen 240 KIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQG 298 (311)
T ss_pred EEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecCC
Confidence 99994433 221 12 235689999999999999999999999999876654 555543
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=244.78 Aligned_cols=242 Identities=19% Similarity=0.273 Sum_probs=207.2
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC----cccccccccccCeEEEEEeCCCC-EEEEeceeeEEeee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN----TLLEKFDEHEGPVRGICFHNQQP-IFVSGGKMIVMAYQ 78 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~----~~l~~~~~h~~~V~~i~fsp~~~-~l~sgs~~~~~~~~ 78 (641)
-+.||++.|.+++...+|.+|++|+.|.++++|-+..+ -++....+|.+.|.+++++..+. +|++++
T Consensus 360 ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS-------- 431 (775)
T KOG0319|consen 360 IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVS-------- 431 (775)
T ss_pred EEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEec--------
Confidence 46899999999997778899999999999999977433 24566779999999999987654 677776
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCe-----eEE----EEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEE
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK-----CIF----TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~-----~~~----~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd 149 (641)
.|+++++|++...+ ... +...|+..|++++.+|+..+|++||.|.+.+||+
T Consensus 432 --------------------~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~ 491 (775)
T KOG0319|consen 432 --------------------QDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWD 491 (775)
T ss_pred --------------------CCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeec
Confidence 99999999997622 122 3346999999999999999999999999999999
Q ss_pred CCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCC
Q psy9327 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNP 229 (641)
Q Consensus 150 ~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~ 229 (641)
+...+...+|.||...|.|+.|+|....++|+|.|+||+||.++++.+..++.||...|.....- .-...+.++.+
T Consensus 492 le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~----~~~~qliS~~a 567 (775)
T KOG0319|consen 492 LEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFI----RNGKQLISAGA 567 (775)
T ss_pred ccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeee----eCCcEEEeccC
Confidence 99999999999999999999999999999999999999999999999999999997776642211 01112778899
Q ss_pred CeeEEEec-CCCcceeeecC-CcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 230 KHTLHICN-RKMEPLCNIHE-NTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 230 d~~I~i~d-~~~~~~~~~~~-~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
||.+++|+ ++.++..++.. ..+|++++-++.+.+++||+.|+++.+|.
T Consensus 568 dGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 568 DGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWK 617 (775)
T ss_pred CCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEee
Confidence 99999999 77788888764 78999999999999999999999998886
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.5e-26 Score=218.38 Aligned_cols=239 Identities=18% Similarity=0.297 Sum_probs=201.2
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
++++|++.|..+.|.+|++.+++++.|.+|+.||.++|+.+++++.|...|+.+.-+..|+.+++++
T Consensus 85 ~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~Sg------------- 151 (338)
T KOG0265|consen 85 VLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSG------------- 151 (338)
T ss_pred eeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEec-------------
Confidence 5789999999999999999999999999999999999999999999999999999666677777666
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCC
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~ 163 (641)
++|+++++||+++..++.++. ..-+++++.|..++..+.+|+-|+.|++||++...+..++.||.
T Consensus 152 --------------sdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~ 216 (338)
T KOG0265|consen 152 --------------SDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHA 216 (338)
T ss_pred --------------CCCceEEEEeecccchhhccc-cceeEEEEEecccccceeeccccCceeeeccccCcceEEeeccc
Confidence 599999999999999888886 45678999999999999999999999999999999999999999
Q ss_pred CCEEEEEEecCCCEEEEEeCCCeEEEEecCC----CceeeeccCCCc----eeeecccCCCceeeeee-eeeeCCCeeEE
Q psy9327 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDISG----LRKKNVAPGMGK----LVLSMKSKHPIWKYCKP-VKYCNPKHTLH 234 (641)
Q Consensus 164 ~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~----~~~~~~~~~~~~----~v~s~~~~~~v~~~~~~-l~s~~~d~~I~ 234 (641)
+.|+.+..+|+|..+.|-+.|.++++||++- .+++..+.++.+ ..+..+ |..... +.+|+.|..+.
T Consensus 217 DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cs-----wsp~~~~i~ags~dr~vy 291 (338)
T KOG0265|consen 217 DTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCS-----WSPNGTKITAGSADRFVY 291 (338)
T ss_pred CceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceee-----ccCCCCccccccccceEE
Confidence 9999999999999999999999999999974 344555555421 111101 111111 55778999999
Q ss_pred EecCCC-cceeeec-CCcceEEEEEcCCccEEEEecCCeEEEE
Q psy9327 235 ICNRKM-EPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAI 275 (641)
Q Consensus 235 i~d~~~-~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l 275 (641)
+||... ..+..++ +...|.++.|+|...+|.+++.|..+++
T Consensus 292 vwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 292 VWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYL 334 (338)
T ss_pred EeecccccEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEe
Confidence 999554 4444444 4788999999999999999998888775
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.8e-26 Score=246.29 Aligned_cols=243 Identities=14% Similarity=0.282 Sum_probs=186.8
Q ss_pred ceeec-cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECcc----------------------------------------
Q psy9327 2 LTKFE-TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRM---------------------------------------- 40 (641)
Q Consensus 2 l~~~~-~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~---------------------------------------- 40 (641)
.+++. .|.+.|.++.||+||+|||+||.||.|+||.+..
T Consensus 259 ~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~ 338 (712)
T KOG0283|consen 259 VQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSS 338 (712)
T ss_pred eeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccc
Confidence 35666 8999999999999999999999999999998744
Q ss_pred --------------------CcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCC
Q psy9327 41 --------------------NTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDD 100 (641)
Q Consensus 41 --------------------~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~D 100 (641)
.+++..|.+|.+.|..|.||.++ +|++++ .|
T Consensus 339 ~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSS----------------------------MD 389 (712)
T KOG0283|consen 339 SRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSS----------------------------MD 389 (712)
T ss_pred cccccCCccccCCCccccccccchhhhhccchhheecccccCC-eeEecc----------------------------cc
Confidence 01234467899999999998776 667776 99
Q ss_pred CeEEEEECCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEE
Q psy9327 101 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVV 179 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lv 179 (641)
.+|++|++...+|+..|. |.+.|+|++|+| |.++|+|||-|++|+||++...+......- .+.|++++|.|+|...+
T Consensus 390 KTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl-~~lITAvcy~PdGk~av 467 (712)
T KOG0283|consen 390 KTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDL-RDLITAVCYSPDGKGAV 467 (712)
T ss_pred ccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehhh-hhhheeEEeccCCceEE
Confidence 999999999999999998 999999999999 788999999999999999998886655554 48899999999999999
Q ss_pred EEeCCCeEEEEecCCCceeeeccCC--------CceeeecccCCCceeeeeeeeeeCCCeeEEEecCC-Ccc---eeeec
Q psy9327 180 SASLDQTIRVWDISGLRKKNVAPGM--------GKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK-MEP---LCNIH 247 (641)
Q Consensus 180 Sgs~DgtI~IWD~~~~~~~~~~~~~--------~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~-~~~---~~~~~ 247 (641)
.|+.+|.+++|+....+......-. ++.|..+......- --+...+.|..|+|+|.+ ... ++-++
T Consensus 468 IGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~---~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~ 544 (712)
T KOG0283|consen 468 IGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDP---DEVLVTSNDSRIRIYDGRDKDLVHKFKGFR 544 (712)
T ss_pred EEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCC---CeEEEecCCCceEEEeccchhhhhhhcccc
Confidence 9999999999999887655443211 11222111110000 014455678888888853 222 22233
Q ss_pred CCcceEEEEEcCCccEEEEecCCeEEEEEcC
Q psy9327 248 ENTRVKSGAWDESGVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 248 ~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~ 278 (641)
....-....|+.||.+|+++++|..+++|+.
T Consensus 545 n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~ 575 (712)
T KOG0283|consen 545 NTSSQISASFSSDGKHIVSASEDSWVYIWKN 575 (712)
T ss_pred cCCcceeeeEccCCCEEEEeecCceEEEEeC
Confidence 3445566778888888888888888888875
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-25 Score=237.70 Aligned_cols=299 Identities=18% Similarity=0.321 Sum_probs=234.2
Q ss_pred ceeecc-CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCC--EEEEeceeeEEeee
Q psy9327 2 LTKFET-KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP--IFVSGGKMIVMAYQ 78 (641)
Q Consensus 2 l~~~~~-H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~--~l~sgs~~~~~~~~ 78 (641)
++.++. |++||..++|+|.+.++++|+.||.|++||+..+.+...|++|.+.|.++.|+|+.. .|++|+
T Consensus 97 irswKa~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~-------- 168 (775)
T KOG0319|consen 97 IRSWKAIHEAPVITMAFDPTGTLLATGGADGRVKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGA-------- 168 (775)
T ss_pred hHhHhhccCCCeEEEEEcCCCceEEeccccceEEEEEeeCCEEEEEecCCCceEEEEEeCCccchhheeecC--------
Confidence 456666 999999999999999999999999999999999999999999999999999999754 467776
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCe-eEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC----
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK-CIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR---- 153 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~-~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~---- 153 (641)
.|+++++||+++++ ++.++..|...|++++|++++.-++++|.|..|.+||+.+.
T Consensus 169 --------------------~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~ 228 (775)
T KOG0319|consen 169 --------------------TDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLK 228 (775)
T ss_pred --------------------CCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhh
Confidence 99999999999655 48889999999999999999999999999999999987431
Q ss_pred --------------------------------------------------------------------------------
Q psy9327 154 -------------------------------------------------------------------------------- 153 (641)
Q Consensus 154 -------------------------------------------------------------------------------- 153 (641)
T Consensus 229 ~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~ 308 (775)
T KOG0319|consen 229 TLPLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLY 308 (775)
T ss_pred eechhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEE
Confidence
Q ss_pred -------------------------------------e----------eEEEEccCCCCEEEEEEecCCCEEEEEeCCCe
Q psy9327 154 -------------------------------------N----------CICVLTGHNHYVMCAQFHPTDDIVVSASLDQT 186 (641)
Q Consensus 154 -------------------------------------~----------~i~~l~~h~~~V~sl~fsp~g~~lvSgs~Dgt 186 (641)
. ..+.+.||.+.|+++....+|.+|+|||.|++
T Consensus 309 d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~s 388 (775)
T KOG0319|consen 309 DEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKS 388 (775)
T ss_pred EccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCce
Confidence 0 01134689999999996667899999999999
Q ss_pred EEEEecCCCc----eeeeccCCCceeeecccCCC---------------ceeeee-------------------------
Q psy9327 187 IRVWDISGLR----KKNVAPGMGKLVLSMKSKHP---------------IWKYCK------------------------- 222 (641)
Q Consensus 187 I~IWD~~~~~----~~~~~~~~~~~v~s~~~~~~---------------v~~~~~------------------------- 222 (641)
+++|.+.+.. +.....+|...+.++...+. +|.+..
T Consensus 389 vilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~ 468 (775)
T KOG0319|consen 389 VILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINC 468 (775)
T ss_pred EEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccc
Confidence 9999774332 23334455544443221111 222111
Q ss_pred --------eeeeeCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCC-eEecccc-ce
Q psy9327 223 --------PVKYCNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG-IIRTLDL-PI 290 (641)
Q Consensus 223 --------~l~s~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g-~I~~~d~-p~ 290 (641)
-+++|+.|.+.++|+ ........+. |...|+++.|++..+.++|+|.|..+.||+-++. .+++++. ..
T Consensus 469 Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~ 548 (775)
T KOG0319|consen 469 VAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTS 548 (775)
T ss_pred eEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccc
Confidence 078889999999999 4444455554 4778999999999999999999999999997665 4667663 22
Q ss_pred EE----EEEcCcEEEEEeCCCCeEEEEeCCcchhhhHHHhcc
Q psy9327 291 YI----TKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINH 328 (641)
Q Consensus 291 ~~----~~~~g~~v~~~~~dg~i~v~~~~~~~~~~k~~l~~~ 328 (641)
.. +-.+|..+++++.||-+++|++.+.+....+.-.+.
T Consensus 549 aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~D 590 (775)
T KOG0319|consen 549 AVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHND 590 (775)
T ss_pred eeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccc
Confidence 22 446799999999999999999999888766654443
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-25 Score=242.83 Aligned_cols=239 Identities=23% Similarity=0.351 Sum_probs=203.4
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
..+.||.+.|.+++|..-++.+++|+.|.++++||..+|++...+.+|.+.|.++...+ ..+++|+
T Consensus 243 ~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~--~~~~sgs------------ 308 (537)
T KOG0274|consen 243 TRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDP--FLLVSGS------------ 308 (537)
T ss_pred eeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccC--ceEeecc------------
Confidence 34999999999999998788999999999999999999999999999999999988644 4566666
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h 162 (641)
.|.+|+||++.++.++.++.+|.++|+++..+ ++++++|+.|++|++||+.+++|+.++.||
T Consensus 309 ----------------~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH 370 (537)
T KOG0274|consen 309 ----------------RDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGH 370 (537)
T ss_pred ----------------CCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCC
Confidence 99999999999999999999999999999998 889999999999999999999999999999
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCC-ceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCC
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL-RKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKM 240 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~-~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~ 240 (641)
.++|.++.+.+. ..+++|+.|++|++||+.+. +++.++.+|...+.++...... +.+++.|+.|++|| ..+
T Consensus 371 ~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~~~~~------Lvs~~aD~~Ik~WD~~~~ 443 (537)
T KOG0274|consen 371 TGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLLRDNF------LVSSSADGTIKLWDAEEG 443 (537)
T ss_pred cceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCcccccccccccce------eEeccccccEEEeecccC
Confidence 999999988765 89999999999999999999 9999999988777554332221 67888999999999 556
Q ss_pred cceeeecCC--cceEEEEEcCCccEEEEecCCeEEEEEcCCCCe
Q psy9327 241 EPLCNIHEN--TRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI 282 (641)
Q Consensus 241 ~~~~~~~~~--~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~ 282 (641)
+++..+... ..|.++++. ...+++.+.++.+.+|+...+.
T Consensus 444 ~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~ 485 (537)
T KOG0274|consen 444 ECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRSGT 485 (537)
T ss_pred ceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEecccCc
Confidence 666666552 566666665 2456666677777777655554
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-25 Score=227.09 Aligned_cols=266 Identities=19% Similarity=0.325 Sum_probs=210.4
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
.+.|.+++|+|..++=.+-...-.++||+..+....++|......|.++.|..||.++++|+
T Consensus 26 ~~~vssl~fsp~~P~d~aVt~S~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD------------------ 87 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYDFAVTSSVRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGD------------------ 87 (487)
T ss_pred cCcceeEecCCCCCCceEEecccEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccC------------------
Confidence 47899999999777533333345799999998888888888889999999999999999998
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEE
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVM 167 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~ 167 (641)
..|.|+|+|+++...+..+.+|+.+|..+.|+|++ ..+++|++|+.+++||+.+......+.+|+++|+
T Consensus 88 ----------~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR 157 (487)
T KOG0310|consen 88 ----------ESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVR 157 (487)
T ss_pred ----------CcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeE
Confidence 99999999988888889999999999999999965 5788999999999999999987778999999999
Q ss_pred EEEEecC-CCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeee----eeeeeCCCeeEEEecC--CC
Q psy9327 168 CAQFHPT-DDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCK----PVKYCNPKHTLHICNR--KM 240 (641)
Q Consensus 168 sl~fsp~-g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~----~l~s~~~d~~I~i~d~--~~ 240 (641)
|.+|+|- +..++|||.||+||+||+++.. ..+++++..+|+-.+++ ++....+++.+++||. .+
T Consensus 158 ~g~~~~~~~hivvtGsYDg~vrl~DtR~~~---------~~v~elnhg~pVe~vl~lpsgs~iasAgGn~vkVWDl~~G~ 228 (487)
T KOG0310|consen 158 CGDISPANDHIVVTGSYDGKVRLWDTRSLT---------SRVVELNHGCPVESVLALPSGSLIASAGGNSVKVWDLTTGG 228 (487)
T ss_pred eeccccCCCeEEEecCCCceEEEEEeccCC---------ceeEEecCCCceeeEEEcCCCCEEEEcCCCeEEEEEecCCc
Confidence 9999995 5689999999999999999852 33444445555444432 2333346788999993 34
Q ss_pred cceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEc-CCCCeEeccccceEE----EEEcCcEEEEEeCCCCeEE
Q psy9327 241 EPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVN-GDHGIIRTLDLPIYI----TKIKGNQVYYLDRECSPHV 311 (641)
Q Consensus 241 ~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~-~~~g~I~~~d~p~~~----~~~~g~~v~~~~~dg~i~v 311 (641)
..++... +...|+|+.+..++..|++++-|+.+.+++ ++-..+..|..|-.+ ..+++..++.+-.+|-+.+
T Consensus 229 qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~~~pvLsiavs~dd~t~viGmsnGlv~~ 305 (487)
T KOG0310|consen 229 QLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWKYPGPVLSIAVSPDDQTVVIGMSNGLVSI 305 (487)
T ss_pred eehhhhhcccceEEEEEeecCCceEeecccccceEEEEccceEEEEeeecccceeeEEecCCCceEEEecccceeee
Confidence 4455554 788999999999999999999999999999 445667788776222 2234455555555555444
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-24 Score=235.00 Aligned_cols=248 Identities=13% Similarity=0.150 Sum_probs=187.2
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccc-------------ccccccccCeEEEEEeC-CCCEEEEecee
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLL-------------EKFDEHEGPVRGICFHN-QQPIFVSGGKM 72 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l-------------~~~~~h~~~V~~i~fsp-~~~~l~sgs~~ 72 (641)
.|-..|+....++++..+++++.+.....|+...+..+ ..+.+|.++|.+++|+| ++.+|++|+
T Consensus 18 ~~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS-- 95 (493)
T PTZ00421 18 RHFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTAS-- 95 (493)
T ss_pred cceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEe--
Confidence 34456777778888777788887877778875433221 13668999999999999 788999998
Q ss_pred eEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC-------eeEEEEccCCCCeEEEEEccCC-CEEEEEeCCCe
Q psy9327 73 IVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR-------KCIFTLLGHLDYIRTTFFHHEY-PWILSASDDQT 144 (641)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~-------~~~~~~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~ 144 (641)
.|++|++||+.++ .++..+.+|...|.+++|+|++ .+|++|+.|++
T Consensus 96 --------------------------~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt 149 (493)
T PTZ00421 96 --------------------------EDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV 149 (493)
T ss_pred --------------------------CCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence 9999999999765 3577899999999999999985 69999999999
Q ss_pred EEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeee
Q psy9327 145 IRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPV 224 (641)
Q Consensus 145 I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l 224 (641)
|++||+++++++..+.+|.+.|.+++|+|+|.+|++++.|++|++||+++++....+.+|...........+-....+..
T Consensus 150 VrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~ 229 (493)
T PTZ00421 150 VNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITL 229 (493)
T ss_pred EEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEE
Confidence 99999999999999999999999999999999999999999999999999988877776643321111111111111110
Q ss_pred -eeeCCCeeEEEecCC-C-cceeee--cCCcceEEEEEcCCccEEEEec-CCeEEEEEcCCCCe
Q psy9327 225 -KYCNPKHTLHICNRK-M-EPLCNI--HENTRVKSGAWDESGVFIYTTS-NHIKYAIVNGDHGI 282 (641)
Q Consensus 225 -~s~~~d~~I~i~d~~-~-~~~~~~--~~~~~I~sla~~p~g~~L~t~s-~~~k~~l~~~~~g~ 282 (641)
.+.+.++.|++||.+ . .++... +....+....|++++.++++++ .++.+.+|+..++.
T Consensus 230 G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~ 293 (493)
T PTZ00421 230 GCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNER 293 (493)
T ss_pred ecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCc
Confidence 012357899999943 3 233332 2344566678999999988876 57777777765543
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-24 Score=235.63 Aligned_cols=225 Identities=13% Similarity=0.196 Sum_probs=172.4
Q ss_pred eeccCCCCeEEEEEcc-CCCeEEEEeCCCcEEEEECccC-------cccccccccccCeEEEEEeCCC-CEEEEeceeeE
Q psy9327 4 KFETKSARVKGLSFHP-KRPWILSSLHNGVIQLWDYRMN-------TLLEKFDEHEGPVRGICFHNQQ-PIFVSGGKMIV 74 (641)
Q Consensus 4 ~~~~H~~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~~-------~~l~~~~~h~~~V~~i~fsp~~-~~l~sgs~~~~ 74 (641)
.+.+|.+.|.+++|+| ++++|++|+.||+|++||+.++ +.+..+.+|...|.+++|+|++ .+|++|+
T Consensus 70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs---- 145 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAG---- 145 (493)
T ss_pred eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEe----
Confidence 4789999999999999 8899999999999999999765 2456788999999999999985 6888887
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN 154 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~ 154 (641)
.|++|++||+++++.+..+.+|.+.|.+++|+|++.+|++|+.|++|++||+++++
T Consensus 146 ------------------------~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~ 201 (493)
T PTZ00421 146 ------------------------ADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGT 201 (493)
T ss_pred ------------------------CCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCc
Confidence 99999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEccCCCC-EEEEEEecCCCEEEEEe----CCCeEEEEecCCCceeee-ccCCCceeeecccCCCceeeeee-ee-e
Q psy9327 155 CICVLTGHNHY-VMCAQFHPTDDIVVSAS----LDQTIRVWDISGLRKKNV-APGMGKLVLSMKSKHPIWKYCKP-VK-Y 226 (641)
Q Consensus 155 ~i~~l~~h~~~-V~sl~fsp~g~~lvSgs----~DgtI~IWD~~~~~~~~~-~~~~~~~v~s~~~~~~v~~~~~~-l~-s 226 (641)
.+..+.+|.+. +..+.|++++..+++++ .|++|++||+++...... ...+......+ +.|..... +. .
T Consensus 202 ~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~----~~~d~d~~~L~lg 277 (493)
T PTZ00421 202 IVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFI----PFFDEDTNLLYIG 277 (493)
T ss_pred EEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEE----EEEcCCCCEEEEE
Confidence 99999999865 45678999888877654 479999999987653222 21111111110 11211111 33 3
Q ss_pred eCCCeeEEEecCC-Ccceeee--cCCcceEEEEEcCC
Q psy9327 227 CNPKHTLHICNRK-MEPLCNI--HENTRVKSGAWDES 260 (641)
Q Consensus 227 ~~~d~~I~i~d~~-~~~~~~~--~~~~~I~sla~~p~ 260 (641)
+..|+.|++||.. ...+... ....++..++|.|.
T Consensus 278 gkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk 314 (493)
T PTZ00421 278 SKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPK 314 (493)
T ss_pred EeCCCeEEEEEeeCCceEEEeeccCCCCCcceEeccc
Confidence 4469999999943 3332221 22345556666664
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-24 Score=221.51 Aligned_cols=239 Identities=18% Similarity=0.253 Sum_probs=203.1
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
|..-.+.|.+++|-.||.++|+|+..|.|+++|+.+...++.+.+|..||..+.|+|++..+++.+
T Consensus 64 ~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~-------------- 129 (487)
T KOG0310|consen 64 FSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSG-------------- 129 (487)
T ss_pred HHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEec--------------
Confidence 445567899999999999999999999999999888778999999999999999999766554444
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCC-eeEEEEccC
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSR-NCICVLTGH 162 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~-~~i~~l~~h 162 (641)
++|+.+++||+.+......+.+|+++|+|.+|+|..+ +++|||-||+|++||.++. ..+.++. |
T Consensus 130 -------------sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln-h 195 (487)
T KOG0310|consen 130 -------------SDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN-H 195 (487)
T ss_pred -------------CCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec-C
Confidence 3999999999999998778999999999999999655 7889999999999999987 5666776 9
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCC-ceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCC
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL-RKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKM 240 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~-~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~ 240 (641)
..+|..+.|-|.|..|+||+.. .|+|||+.++ +.......|.+.|.|+..... ...+.+++-|+.+++|| .+.
T Consensus 196 g~pVe~vl~lpsgs~iasAgGn-~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~----~~rLlS~sLD~~VKVfd~t~~ 270 (487)
T KOG0310|consen 196 GCPVESVLALPSGSLIASAGGN-SVKVWDLTTGGQLLTSMFNHNKTVTCLRLASD----STRLLSGSLDRHVKVFDTTNY 270 (487)
T ss_pred CCceeeEEEcCCCCEEEEcCCC-eEEEEEecCCceehhhhhcccceEEEEEeecC----CceEeecccccceEEEEccce
Confidence 9999999999999999999865 8999999855 444555558888888663331 12378899999999999 666
Q ss_pred cceeeecCCcceEEEEEcCCccEEEEecCCeEEEEE
Q psy9327 241 EPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIV 276 (641)
Q Consensus 241 ~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~ 276 (641)
+.+..+.-.++|.+++.+|++..++.|-.+|-+.+-
T Consensus 271 Kvv~s~~~~~pvLsiavs~dd~t~viGmsnGlv~~r 306 (487)
T KOG0310|consen 271 KVVHSWKYPGPVLSIAVSPDDQTVVIGMSNGLVSIR 306 (487)
T ss_pred EEEEeeecccceeeEEecCCCceEEEecccceeeee
Confidence 667777779999999999999999999888877765
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-24 Score=234.90 Aligned_cols=275 Identities=21% Similarity=0.346 Sum_probs=231.5
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccc-ccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeeccc
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK-FDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRN 86 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~-~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~ 86 (641)
|...+.+..|+ ..++++++.|++|++||..++..+.. +.+|.+.|.+++|...+..+++|+
T Consensus 207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS---------------- 268 (537)
T KOG0274|consen 207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGS---------------- 268 (537)
T ss_pred Ccchhhhheee--cCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEe----------------
Confidence 56778888898 45799999999999999999988888 999999999999988888999997
Q ss_pred CCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCE
Q psy9327 87 EPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYV 166 (641)
Q Consensus 87 ~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V 166 (641)
.|.+++|||+.+|.+..++.+|.+.|+++...+ ..+++||.|.+|++|+++++.++..+.+|.+.|
T Consensus 269 ------------~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~--~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V 334 (537)
T KOG0274|consen 269 ------------TDKTERVWDCSTGECTHSLQGHTSSVRCLTIDP--FLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPV 334 (537)
T ss_pred ------------cCCcEEeEecCCCcEEEEecCCCceEEEEEccC--ceEeeccCCceEEEEeccCcceEEEeccccccE
Confidence 999999999999999999999999999887754 468889999999999999999999999999999
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC-CC-ccee
Q psy9327 167 MCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR-KM-EPLC 244 (641)
Q Consensus 167 ~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~-~~-~~~~ 244 (641)
+++..+ ++.+++|+.|++|++||..+++++.++.+|...|.++....- .-+.+|+.|+.|++||. +. .++.
T Consensus 335 ~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-----~~~~Sgs~D~~IkvWdl~~~~~c~~ 407 (537)
T KOG0274|consen 335 NCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-----NRLLSGSLDTTIKVWDLRTKRKCIH 407 (537)
T ss_pred EEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-----ceEEeeeeccceEeecCCchhhhhh
Confidence 999997 999999999999999999999999999999999988644331 11678889999999994 44 4666
Q ss_pred eecCCc-ceEEEEEcCCccEEEEecCCeEEEEEcCCCC-eEeccccc----eEEEEEcCcEEEEEeCCCCeEEEEeCCcc
Q psy9327 245 NIHENT-RVKSGAWDESGVFIYTTSNHIKYAIVNGDHG-IIRTLDLP----IYITKIKGNQVYYLDRECSPHVLRIDPTE 318 (641)
Q Consensus 245 ~~~~~~-~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g-~I~~~d~p----~~~~~~~g~~v~~~~~dg~i~v~~~~~~~ 318 (641)
.+.... -+.++. ..+.+|.+++.|+.+.+|+.+++ .++++..+ +.........+++.+.||.+.+|++.+..
T Consensus 408 tl~~h~~~v~~l~--~~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~~~~il~s~~~~~~~l~dl~~~~ 485 (537)
T KOG0274|consen 408 TLQGHTSLVSSLL--LRDNFLVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALGKEEILCSSDDGSVKLWDLRSGT 485 (537)
T ss_pred hhcCCcccccccc--cccceeEeccccccEEEeecccCceeeeeccCCcccEEEeecCcceEEEEecCCeeEEEecccCc
Confidence 666533 343333 34679999999999999987665 45666663 22233335889999999999999999877
Q ss_pred hhhhH
Q psy9327 319 FKFKL 323 (641)
Q Consensus 319 ~~~k~ 323 (641)
....+
T Consensus 486 ~~~~l 490 (537)
T KOG0274|consen 486 LIRTL 490 (537)
T ss_pred hhhhh
Confidence 76655
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-24 Score=229.48 Aligned_cols=275 Identities=20% Similarity=0.313 Sum_probs=228.2
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccc--ccccccccCeEE-EEEeCCCC-EEEEeceeeEEeee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLL--EKFDEHEGPVRG-ICFHNQQP-IFVSGGKMIVMAYQ 78 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l--~~~~~h~~~V~~-i~fsp~~~-~l~sgs~~~~~~~~ 78 (641)
+.+++|++.|..+++.+. .+++++|.||++++|+-..++.+ ..+.+|.+.|.. +++-+..+ .+++|+
T Consensus 8 ~~l~gH~~DVr~v~~~~~-~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~-------- 78 (745)
T KOG0301|consen 8 HELEGHKSDVRAVAVTDG-VCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGG-------- 78 (745)
T ss_pred EEeccCccchheeEecCC-eEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeec--------
Confidence 578999999999998764 48999999999999996555443 347778888887 88876444 477777
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
.|.+|.+|...+..++.++.+|...|++++...++. ++|||+|.++++|-. +++...
T Consensus 79 --------------------~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~--~~l~~~ 135 (745)
T KOG0301|consen 79 --------------------MDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRI--GELVYS 135 (745)
T ss_pred --------------------ccceEEEEecCCCCchhhhhccccceeeeecCCcCc-eEecccccceEEecc--hhhhcc
Confidence 999999999999999999999999999998877776 999999999999964 567778
Q ss_pred EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~ 238 (641)
+.+|...|.++.+-|++ .++|||.|.+|++|.- ++..+++.+|...|..+..-. ...+.+|+.|+.|+.|+.
T Consensus 136 l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~-----~~~flScsNDg~Ir~w~~ 207 (745)
T KOG0301|consen 136 LQGHTASVWAVASLPEN-TYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLD-----DSHFLSCSNDGSIRLWDL 207 (745)
T ss_pred cCCcchheeeeeecCCC-cEEeccCcceeeeccC--CchhhhhccchhheeeeEEec-----CCCeEeecCCceEEEEec
Confidence 99999999999999988 8999999999999965 778889999988877543211 112789999999999998
Q ss_pred CCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEeccccce-EEEEE---cCcEEEEEeCCCCeEEEE
Q psy9327 239 KMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLPI-YITKI---KGNQVYYLDRECSPHVLR 313 (641)
Q Consensus 239 ~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~p~-~~~~~---~g~~v~~~~~dg~i~v~~ 313 (641)
.++.+...+ ++..+.+++...++..++++++|+.+.+|..+ ....++..|- .+|.. ....+++++.||.+++|.
T Consensus 208 ~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~-e~~q~I~lPttsiWsa~~L~NgDIvvg~SDG~VrVfT 286 (745)
T KOG0301|consen 208 DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD-ECVQVITLPTTSIWSAKVLLNGDIVVGGSDGRVRVFT 286 (745)
T ss_pred cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC-ceEEEEecCccceEEEEEeeCCCEEEeccCceEEEEE
Confidence 888777766 47889999977788899999999999999876 6677777774 34443 367789999999999998
Q ss_pred eCCcc
Q psy9327 314 IDPTE 318 (641)
Q Consensus 314 ~~~~~ 318 (641)
.+..+
T Consensus 287 ~~k~R 291 (745)
T KOG0301|consen 287 VDKDR 291 (745)
T ss_pred ecccc
Confidence 88544
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.3e-24 Score=234.41 Aligned_cols=226 Identities=11% Similarity=0.150 Sum_probs=175.8
Q ss_pred ceeeccCCCCeEEEEEccC-CCeEEEEeCCCcEEEEECccCc--------ccccccccccCeEEEEEeCCCCEE-EEece
Q psy9327 2 LTKFETKSARVKGLSFHPK-RPWILSSLHNGVIQLWDYRMNT--------LLEKFDEHEGPVRGICFHNQQPIF-VSGGK 71 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspd-g~~Lasg~~dg~I~iWD~~~~~--------~l~~~~~h~~~V~~i~fsp~~~~l-~sgs~ 71 (641)
+..+.+|.+.|.+++|+|+ +++|++|+.||+|+|||+.++. .+..+.+|...|.+++|||++..+ ++++
T Consensus 67 v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS- 145 (568)
T PTZ00420 67 VIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSG- 145 (568)
T ss_pred EEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEe-
Confidence 3578999999999999996 7899999999999999997642 234567899999999999998765 5666
Q ss_pred eeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC
Q psy9327 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151 (641)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~ 151 (641)
.|++|++||+++++....+. |.+.|.+++|+|+|.+|++++.|++|+|||++
T Consensus 146 ---------------------------~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~R 197 (568)
T PTZ00420 146 ---------------------------FDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPR 197 (568)
T ss_pred ---------------------------CCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECC
Confidence 89999999999998887776 66889999999999999999999999999999
Q ss_pred CCeeEEEEccCCCCEEEE-----EEecCCCEEEEEeCCC----eEEEEecCC-CceeeeccCC--CceeeecccCCCcee
Q psy9327 152 SRNCICVLTGHNHYVMCA-----QFHPTDDIVVSASLDQ----TIRVWDISG-LRKKNVAPGM--GKLVLSMKSKHPIWK 219 (641)
Q Consensus 152 ~~~~i~~l~~h~~~V~sl-----~fsp~g~~lvSgs~Dg----tI~IWD~~~-~~~~~~~~~~--~~~v~s~~~~~~v~~ 219 (641)
+++.+.++.+|.+.+.+. .|++++.+++|++.|+ +|++||+++ .+.+...... ...+ .|.|+
T Consensus 198 sg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L------~p~~D 271 (568)
T PTZ00420 198 KQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPL------IPHYD 271 (568)
T ss_pred CCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccce------EEeee
Confidence 999999999998865433 3458888999988774 799999996 3334333211 1111 12222
Q ss_pred ee--eeeeeeCCCeeEEEecCCCcce---eeecCCcceEEEEEcCCcc
Q psy9327 220 YC--KPVKYCNPKHTLHICNRKMEPL---CNIHENTRVKSGAWDESGV 262 (641)
Q Consensus 220 ~~--~~l~s~~~d~~I~i~d~~~~~~---~~~~~~~~I~sla~~p~g~ 262 (641)
.. ..+++|+.|+.|++|+.....+ ..+....+..+++|.|...
T Consensus 272 ~~tg~l~lsGkGD~tIr~~e~~~~~~~~l~~~~s~~p~~g~~f~Pkr~ 319 (568)
T PTZ00420 272 ESTGLIYLIGKGDGNCRYYQHSLGSIRKVNEYKSCSPFRSFGFLPKQI 319 (568)
T ss_pred CCCCCEEEEEECCCeEEEEEccCCcEEeecccccCCCccceEEccccc
Confidence 11 1256788999999999543333 3334467888899999744
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-25 Score=209.74 Aligned_cols=280 Identities=14% Similarity=0.213 Sum_probs=237.6
Q ss_pred eeccCCCCeEEEEEcc---CCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 4 KFETKSARVKGLSFHP---KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 4 ~~~~H~~~V~~l~fsp---dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
+..||+.+|-.++||| +|-+|++++.||.=.+=+-++|.-+.+|++|.+.|.+.....+....++++
T Consensus 9 ~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaa---------- 78 (334)
T KOG0278|consen 9 TCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAA---------- 78 (334)
T ss_pred EEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhc----------
Confidence 5689999999999996 788999999999999999999999999999999999999988887888887
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe-eEEEE
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN-CICVL 159 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~-~i~~l 159 (641)
.|-+-+|||.-+|..+++|. |..-|++++|+.|..+|++|+.+.-++|+|++..+ +...+
T Consensus 79 ------------------adftakvw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~ 139 (334)
T KOG0278|consen 79 ------------------ADFTAKVWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEI 139 (334)
T ss_pred ------------------ccchhhhhhhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhh
Confidence 89999999999999999997 99999999999999999999999999999998654 56778
Q ss_pred ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-C
Q psy9327 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-R 238 (641)
Q Consensus 160 ~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~ 238 (641)
.+|.+.|+.+.|....+.|+|+++|++||+||.+++...+.+.- ...|.|+...+. ..+.+....+.|.+|| +
T Consensus 140 ~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~-~s~VtSlEvs~d-----G~ilTia~gssV~Fwdak 213 (334)
T KOG0278|consen 140 SGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEF-NSPVTSLEVSQD-----GRILTIAYGSSVKFWDAK 213 (334)
T ss_pred cCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEec-CCCCcceeeccC-----CCEEEEecCceeEEeccc
Confidence 89999999999999999999999999999999999988887752 333333222111 1145556788999999 7
Q ss_pred CCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEecc-----ccceEE--EEEcCcEEEEEeCCCCeEE
Q psy9327 239 KMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTL-----DLPIYI--TKIKGNQVYYLDRECSPHV 311 (641)
Q Consensus 239 ~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~-----d~p~~~--~~~~g~~v~~~~~dg~i~v 311 (641)
....++.+.....|.+.+.+|+..++++|+++.+++-++-.+|.-... ..|+.. +.++|..-.+++.||++++
T Consensus 214 sf~~lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirl 293 (334)
T KOG0278|consen 214 SFGLLKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRL 293 (334)
T ss_pred cccceeeccCccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEE
Confidence 788999999999999999999999999999999999887766643222 224444 4467888888999999999
Q ss_pred EEeCCcc
Q psy9327 312 LRIDPTE 318 (641)
Q Consensus 312 ~~~~~~~ 318 (641)
|...+..
T Consensus 294 WQt~~~~ 300 (334)
T KOG0278|consen 294 WQTTPGK 300 (334)
T ss_pred EEecCCC
Confidence 9998744
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-24 Score=209.89 Aligned_cols=284 Identities=18% Similarity=0.288 Sum_probs=229.1
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
+++.|.||++.|..++.....+.+.+++.|.+.+||.+++|.++.++.+|.+.|++|.||+++.++++++
T Consensus 140 lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaS---------- 209 (481)
T KOG0300|consen 140 LVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTAS---------- 209 (481)
T ss_pred ehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEcc----------
Confidence 4678999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEEC----------------------------------------CCCeeEEEEccC
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNY----------------------------------------KQRKCIFTLLGH 120 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~----------------------------------------~t~~~~~~~~~h 120 (641)
.|++-+||.+ .-..++..+.+|
T Consensus 210 ------------------GD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH 271 (481)
T KOG0300|consen 210 ------------------GDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGH 271 (481)
T ss_pred ------------------CCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeecc
Confidence 5555555531 002367788999
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC-Cceee
Q psy9327 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG-LRKKN 199 (641)
Q Consensus 121 ~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~-~~~~~ 199 (641)
.+.|.++.|-..|+.++++++|.+-.+||++++..+..+.||....+.++-||..++++++|.|.+.|+||++. -....
T Consensus 272 ~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~ 351 (481)
T KOG0300|consen 272 RAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVA 351 (481)
T ss_pred ccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999973 34466
Q ss_pred eccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC--CCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 200 VAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR--KMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 200 ~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~--~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
.+.||...|.+. +|.....+.+|+.|.+|++||. ...++.++....+++.++.+..+..++.--.+..+.+++
T Consensus 352 VFQGHtdtVTS~-----vF~~dd~vVSgSDDrTvKvWdLrNMRsplATIRtdS~~NRvavs~g~~iIAiPhDNRqvRlfD 426 (481)
T KOG0300|consen 352 VFQGHTDTVTSV-----VFNTDDRVVSGSDDRTVKVWDLRNMRSPLATIRTDSPANRVAVSKGHPIIAIPHDNRQVRLFD 426 (481)
T ss_pred eecccccceeEE-----EEecCCceeecCCCceEEEeeeccccCcceeeecCCccceeEeecCCceEEeccCCceEEEEe
Confidence 778887776653 2333334788999999999993 346788888889999999988887888777777777776
Q ss_pred CCCCeEeccccc----------eEEEEEc--CcEEEEEeCCCCeEEEEeCCc
Q psy9327 278 GDHGIIRTLDLP----------IYITKIK--GNQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 278 ~~~g~I~~~d~p----------~~~~~~~--g~~v~~~~~dg~i~v~~~~~~ 317 (641)
.....+--+... ...|..+ -..+++..-|..+.-|+++..
T Consensus 427 lnG~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p 478 (481)
T KOG0300|consen 427 LNGNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTP 478 (481)
T ss_pred cCCCccccCCcccccccceeeeeeeccccCcccccccccccceeeeeEeccc
Confidence 554433322111 1111111 245667777888888887753
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-24 Score=217.69 Aligned_cols=245 Identities=13% Similarity=0.151 Sum_probs=187.5
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC---cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN---TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~---~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
+.|+.|++.|.-+.||++|++||+++.|.+..+|++... ++..++.+|..+|..|.||||.+++++++
T Consensus 218 qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg--------- 288 (519)
T KOG0293|consen 218 QILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACG--------- 288 (519)
T ss_pred hhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecC---------
Confidence 457899999999999999999999999999999997543 34777889999999999999999999998
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc-CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG-HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~-h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
.|..+.+||..+|...+.+.. |...+.+++|.||+..+++|+.|++|..||+.... +..
T Consensus 289 -------------------~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~-~~~ 348 (519)
T KOG0293|consen 289 -------------------FDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNI-LGN 348 (519)
T ss_pred -------------------chHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcch-hhc
Confidence 888899999999998887753 45789999999999999999999999999976421 111
Q ss_pred Ec------------------------------------------cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCc
Q psy9327 159 LT------------------------------------------GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196 (641)
Q Consensus 159 l~------------------------------------------~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~ 196 (641)
.. .-..+|++.+.|.+++++++.=.++.+++||+...+
T Consensus 349 W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~ 428 (519)
T KOG0293|consen 349 WEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENK 428 (519)
T ss_pred ccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhh
Confidence 11 123456677777777777776677777777777666
Q ss_pred eeeeccCCC--ceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeecC-CcceEEEEEcCCc-cEEEEecCCe
Q psy9327 197 KKNVAPGMG--KLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIHE-NTRVKSGAWDESG-VFIYTTSNHI 271 (641)
Q Consensus 197 ~~~~~~~~~--~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~-~~~I~sla~~p~g-~~L~t~s~~~ 271 (641)
.+..+.||. +++.... +...- ..-+++|++|+.|.||+ .++.++..+.. ...|++++|+|.. .++|+++.||
T Consensus 429 lv~kY~Ghkq~~fiIrSC-Fgg~~--~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDg 505 (519)
T KOG0293|consen 429 LVRKYFGHKQGHFIIRSC-FGGGN--DKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDG 505 (519)
T ss_pred HHHHhhcccccceEEEec-cCCCC--cceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCC
Confidence 666665542 2222100 00000 00178999999999999 56677777764 7789999999974 5778888888
Q ss_pred EEEEEcCC
Q psy9327 272 KYAIVNGD 279 (641)
Q Consensus 272 k~~l~~~~ 279 (641)
++.||+..
T Consensus 506 tIRIWg~~ 513 (519)
T KOG0293|consen 506 TIRIWGPS 513 (519)
T ss_pred eEEEecCC
Confidence 88888654
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-23 Score=244.77 Aligned_cols=235 Identities=19% Similarity=0.319 Sum_probs=191.8
Q ss_pred CCCeEEEEEcc-CCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeC-CCCEEEEeceeeEEeeeceeeeccc
Q psy9327 9 SARVKGLSFHP-KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN-QQPIFVSGGKMIVMAYQGCILESRN 86 (641)
Q Consensus 9 ~~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp-~~~~l~sgs~~~~~~~~~~~~~~~~ 86 (641)
.+.|.+++|+| ++.+|++|+.||+|++||+.+++.+..+.+|.+.|.+++|+| ++.+|++|+
T Consensus 532 ~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs---------------- 595 (793)
T PLN00181 532 RSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGS---------------- 595 (793)
T ss_pred cCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEc----------------
Confidence 46799999997 478999999999999999999999999999999999999997 788999998
Q ss_pred CCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEc-cCCCEEEEEeCCCeEEEEECCCCe-eEEEEccCCC
Q psy9327 87 EPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWYWQSRN-CICVLTGHNH 164 (641)
Q Consensus 87 ~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fs-p~~~~l~sgs~Dg~I~vWd~~~~~-~i~~l~~h~~ 164 (641)
.|++|++||++++..+.++..+ ..|.++.|+ +++.+|++|+.|+.|++||+++.+ ++..+.+|..
T Consensus 596 ------------~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~ 662 (793)
T PLN00181 596 ------------DDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSK 662 (793)
T ss_pred ------------CCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCC
Confidence 9999999999999998888754 688999995 468999999999999999998765 5778889999
Q ss_pred CEEEEEEecCCCEEEEEeCCCeEEEEecCCC------ceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC
Q psy9327 165 YVMCAQFHPTDDIVVSASLDQTIRVWDISGL------RKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 165 ~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~------~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~ 238 (641)
.|.++.|. ++..+++++.|++|++||++.. ..+..+.+|...+.++... +- ...+++|+.|+.+.+|+.
T Consensus 663 ~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s-~~---~~~lasgs~D~~v~iw~~ 737 (793)
T PLN00181 663 TVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLS-VS---DGYIATGSETNEVFVYHK 737 (793)
T ss_pred CEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEc-CC---CCEEEEEeCCCEEEEEEC
Confidence 99999997 6889999999999999999743 4455666665444332211 11 012778889999999994
Q ss_pred CC-cceee--------------ecCCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 239 KM-EPLCN--------------IHENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 239 ~~-~~~~~--------------~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
.. .+... ..+...|.+++|+|++..+++++.+|.+.+|+
T Consensus 738 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~ 791 (793)
T PLN00181 738 AFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILE 791 (793)
T ss_pred CCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEe
Confidence 32 22111 11235699999999999999998888888875
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-23 Score=200.59 Aligned_cols=282 Identities=13% Similarity=0.187 Sum_probs=232.5
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
.++||+.+++-+.|+.+|.+|.+++.|.+..+|-..+|+.+.++++|.+.|.|+...-+...+++|+
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGS------------- 71 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGS------------- 71 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeecc-------------
Confidence 3689999999999999999999999999999999889999999999999999999999999999998
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC-----CeEEEEECC-------
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD-----QTIRIWYWQ------- 151 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D-----g~I~vWd~~------- 151 (641)
.|.++++||+++|+.+.+++ -..+|+.+.|+++|++++...++ +.|.++|++
T Consensus 72 ---------------AD~t~kLWDv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~ 135 (327)
T KOG0643|consen 72 ---------------ADQTAKLWDVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDID 135 (327)
T ss_pred ---------------ccceeEEEEcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhc
Confidence 99999999999999999998 67899999999999988887664 679999998
Q ss_pred CCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCcee-eeccCCCceeeecccCCCceeeeeeeeeeCCC
Q psy9327 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK-NVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPK 230 (641)
Q Consensus 152 ~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~-~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d 230 (641)
+.++...+..+...++.+.|.|-+..|++|..||.|.+||.+++... .....|++.+..|..... ..-+.+++.|
T Consensus 136 s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d----~T~FiT~s~D 211 (327)
T KOG0643|consen 136 SEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRD----RTYFITGSKD 211 (327)
T ss_pred ccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCC----cceEEecccC
Confidence 45678888888999999999999999999999999999999997543 333445444433221110 0116788899
Q ss_pred eeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEE-------------------------EEcCCCCeEe
Q psy9327 231 HTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYA-------------------------IVNGDHGIIR 284 (641)
Q Consensus 231 ~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~-------------------------l~~~~~g~I~ 284 (641)
.+.++|| ..++.++++....||++.+++|...+++.|+...-.- -..||-|.|.
T Consensus 212 ttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPIN 291 (327)
T KOG0643|consen 212 TTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPIN 291 (327)
T ss_pred ccceeeeccceeeEEEeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcc
Confidence 9999999 7889999999999999999999877777665321111 1233444444
Q ss_pred ccccceEEEEEcCcEEEEEeCCCCeEEEEeCCcchhhhH
Q psy9327 285 TLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKL 323 (641)
Q Consensus 285 ~~d~p~~~~~~~g~~v~~~~~dg~i~v~~~~~~~~~~k~ 323 (641)
.+ +++++|..-.++..||.+++-.++...|.++.
T Consensus 292 sv-----AfhPdGksYsSGGEDG~VR~h~Fd~~YF~~~~ 325 (327)
T KOG0643|consen 292 SV-----AFHPDGKSYSSGGEDGYVRLHHFDSNYFDFKF 325 (327)
T ss_pred ee-----EECCCCcccccCCCCceEEEEEeccchhheEe
Confidence 33 35788999999999999999999988877654
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.2e-24 Score=199.49 Aligned_cols=240 Identities=15% Similarity=0.195 Sum_probs=199.6
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
+|++|.+|...|..++.+.|...+++|+.|..|++||+.+|+.+++|.+|.+.|+.+.|+.+...+++|+
T Consensus 51 liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~Sgs---------- 120 (307)
T KOG0316|consen 51 LIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGS---------- 120 (307)
T ss_pred eeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEecc----------
Confidence 5889999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCC--eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQR--KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~--~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
.|.++++||.++. ++++.+....+.|.++..... .|++||.||+++.||++.++...-
T Consensus 121 ------------------fD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~h--eIvaGS~DGtvRtydiR~G~l~sD 180 (307)
T KOG0316|consen 121 ------------------FDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEH--EIVAGSVDGTVRTYDIRKGTLSSD 180 (307)
T ss_pred ------------------ccceeEEEEcccCCCCccchhhhhcCceeEEEeccc--EEEeeccCCcEEEEEeecceeehh
Confidence 9999999999865 688999999999999988654 599999999999999999987666
Q ss_pred EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN- 237 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d- 237 (641)
.-+ ++|+|++|+++++..+.++.|+++|+.|-.+++.+....||...-+.+... +.....-+.+|++||.+.+||
T Consensus 181 y~g--~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~--l~qsdthV~sgSEDG~Vy~wdL 256 (307)
T KOG0316|consen 181 YFG--HPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCC--LNQSDTHVFSGSEDGKVYFWDL 256 (307)
T ss_pred hcC--CcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeee--ecccceeEEeccCCceEEEEEe
Confidence 554 579999999999999999999999999999999999988874322211100 000011178899999999999
Q ss_pred CCCcceeeecC-Cc-ceEEEEEcCCccEEEEecCCeEEE
Q psy9327 238 RKMEPLCNIHE-NT-RVKSGAWDESGVFIYTTSNHIKYA 274 (641)
Q Consensus 238 ~~~~~~~~~~~-~~-~I~sla~~p~g~~L~t~s~~~k~~ 274 (641)
.....+..+.. .. .+.+++++|.-..++++..++.+.
T Consensus 257 vd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~~~~~~ 295 (307)
T KOG0316|consen 257 VDETQISKLSVVSTVIVTDLSCHPTMDDFITATGHGDLF 295 (307)
T ss_pred ccceeeeeeccCCceeEEeeecccCccceeEecCCceec
Confidence 44445555544 33 478999999977777766555443
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-25 Score=227.56 Aligned_cols=205 Identities=24% Similarity=0.401 Sum_probs=177.8
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCC-CEEEEeceeeEEeeec
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ-PIFVSGGKMIVMAYQG 79 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~-~~l~sgs~~~~~~~~~ 79 (641)
++++|.+|..+|.+++|+++|..++|++.|+.+++||.++|+++.+|. -...++|+.|+|++ +.|++|+
T Consensus 250 ~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~--------- 319 (503)
T KOG0282|consen 250 CLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGG--------- 319 (503)
T ss_pred eehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEec---------
Confidence 478999999999999999999999999999999999999999998884 45678999999988 7888887
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe-----
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN----- 154 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~----- 154 (641)
.|+.|+.||+++++.++.+..|.+.|..+.|-+++..|+++++|++++||+++..-
T Consensus 320 -------------------sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i 380 (503)
T KOG0282|consen 320 -------------------SDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNI 380 (503)
T ss_pred -------------------CCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhh
Confidence 99999999999999999999999999999999999999999999999999987541
Q ss_pred ---------------------------eE--------------EEEccCC--CCEEEEEEecCCCEEEEEeCCCeEEEEe
Q psy9327 155 ---------------------------CI--------------CVLTGHN--HYVMCAQFHPTDDIVVSASLDQTIRVWD 191 (641)
Q Consensus 155 ---------------------------~i--------------~~l~~h~--~~V~sl~fsp~g~~lvSgs~DgtI~IWD 191 (641)
.+ ..+.||. ++-..+.|||||.+|+||+.||.+.+||
T Consensus 381 ~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wd 460 (503)
T KOG0282|consen 381 ADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWD 460 (503)
T ss_pred cchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEee
Confidence 11 1234663 5677889999999999999999999999
Q ss_pred cCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 192 ISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 192 ~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
+++-+....+..|.+.+.. ...||+-.. -+++|+-+|.|++|+
T Consensus 461 wkt~kl~~~lkah~~~ci~-v~wHP~e~S--kvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 461 WKTTKLVSKLKAHDQPCIG-VDWHPVEPS--KVATCGWDGLIKIWD 503 (503)
T ss_pred chhhhhhhccccCCcceEE-EEecCCCcc--eeEecccCceeEecC
Confidence 9999999999988766665 445554322 277888999999996
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.6e-24 Score=200.91 Aligned_cols=239 Identities=21% Similarity=0.318 Sum_probs=190.8
Q ss_pred CCCeEEEEEccC-CCeEEEEeCCCcEEEEECcc-CcccccccccccCeEEEEEeCC-CCEEEEeceeeEEeeeceeeecc
Q psy9327 9 SARVKGLSFHPK-RPWILSSLHNGVIQLWDYRM-NTLLEKFDEHEGPVRGICFHNQ-QPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 9 ~~~V~~l~fspd-g~~Lasg~~dg~I~iWD~~~-~~~l~~~~~h~~~V~~i~fsp~-~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
.+.+..++|+++ .+.+++++.||+++|||... ..++..|++|...|.++.|++. +..+++++
T Consensus 60 ~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsS--------------- 124 (311)
T KOG0277|consen 60 EDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSS--------------- 124 (311)
T ss_pred ccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeec---------------
Confidence 467899999985 45788999999999999754 3578999999999999999984 55666666
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccC-CCEEEEEeCCCeEEEEECCCCeeEEEEccCCC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE-YPWILSASDDQTIRIWYWQSRNCICVLTGHNH 164 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~-~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~ 164 (641)
.|++|++||...++.+.+|.+|...|...+|||. .++|+++|.|++.++||++....-..+..|..
T Consensus 125 -------------WD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~ 191 (311)
T KOG0277|consen 125 -------------WDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNS 191 (311)
T ss_pred -------------cCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccc
Confidence 9999999999999999999999999999999995 56899999999999999987554445889999
Q ss_pred CEEEEEEec-CCCEEEEEeCCCeEEEEecCCCce-eeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC--C
Q psy9327 165 YVMCAQFHP-TDDIVVSASLDQTIRVWDISGLRK-KNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK--M 240 (641)
Q Consensus 165 ~V~sl~fsp-~g~~lvSgs~DgtI~IWD~~~~~~-~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~--~ 240 (641)
.+.|+.|+. +...++||+.|+.||+||+++.+. +..+.+|+--|..+........ -+++++.|-++++||.. .
T Consensus 192 Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~---lLaSasYDmT~riw~~~~~d 268 (311)
T KOG0277|consen 192 EILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHAS---LLASASYDMTVRIWDPERQD 268 (311)
T ss_pred eeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhh---HhhhccccceEEecccccch
Confidence 999999998 567899999999999999998653 4555666655544332211111 17889999999999933 2
Q ss_pred cceeee-cCCcceEEEEEcCC-ccEEEEecCCeEEEEEcC
Q psy9327 241 EPLCNI-HENTRVKSGAWDES-GVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 241 ~~~~~~-~~~~~I~sla~~p~-g~~L~t~s~~~k~~l~~~ 278 (641)
..+... +++.-+..+.|++- +.++++++=|..+.+|+.
T Consensus 269 s~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 269 SAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred hhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence 333333 45677888888864 678888888888888873
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-23 Score=207.44 Aligned_cols=242 Identities=14% Similarity=0.162 Sum_probs=197.4
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+.++.+|++.|+++.|+.+|.+||+|+-+|.|+||+..++....++...-+.+.=+.|||.++.|++|+
T Consensus 99 ~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~----------- 167 (399)
T KOG0296|consen 99 AGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGS----------- 167 (399)
T ss_pred eeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeec-----------
Confidence 467889999999999999999999999999999999999988888876667788899999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc-
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT- 160 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~- 160 (641)
.||.+.+|.+.++.....+.||..++++=.|.|+|+.++++.+||+|++||..++++++.+.
T Consensus 168 -----------------~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~ 230 (399)
T KOG0296|consen 168 -----------------TDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQ 230 (399)
T ss_pred -----------------CCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecc
Confidence 99999999999988889999999999999999999999999999999999999987665543
Q ss_pred --------------------------------------------------cCCCCEEEEEEec---CCCEEEEEeCCCeE
Q psy9327 161 --------------------------------------------------GHNHYVMCAQFHP---TDDIVVSASLDQTI 187 (641)
Q Consensus 161 --------------------------------------------------~h~~~V~sl~fsp---~g~~lvSgs~DgtI 187 (641)
.|.+.+.|+.|.| .-++.++|+.||+|
T Consensus 231 ~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i 310 (399)
T KOG0296|consen 231 AEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTI 310 (399)
T ss_pred cccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceE
Confidence 1122222333333 33578889999999
Q ss_pred EEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCccEEE
Q psy9327 188 RVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIY 265 (641)
Q Consensus 188 ~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~ 265 (641)
.|||+...+.+...+ |...|..+.... .-.+.++..++.|+.|| +.+....... |...|.+.+.+|++++++
T Consensus 311 ~iyD~a~~~~R~~c~-he~~V~~l~w~~-----t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vv 384 (399)
T KOG0296|consen 311 AIYDLAASTLRHICE-HEDGVTKLKWLN-----TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVV 384 (399)
T ss_pred EEEecccchhheecc-CCCceEEEEEcC-----cchheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCCcEEE
Confidence 999999877766665 333344332221 12267888999999999 5566665555 478999999999999999
Q ss_pred EecCCeEEEEEc
Q psy9327 266 TTSNHIKYAIVN 277 (641)
Q Consensus 266 t~s~~~k~~l~~ 277 (641)
|+|.++...++.
T Consensus 385 T~s~D~~a~VF~ 396 (399)
T KOG0296|consen 385 TVSDDNTALVFE 396 (399)
T ss_pred EecCCCeEEEEe
Confidence 999888777764
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-23 Score=211.27 Aligned_cols=174 Identities=16% Similarity=0.327 Sum_probs=160.0
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
++..|+||...|+.+.|||+...+++++.|..|++|.............|.++|+.+..||+|.||++++
T Consensus 253 ~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs---------- 322 (506)
T KOG0289|consen 253 ILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSAS---------- 322 (506)
T ss_pred hhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccccccccccceeeeeccCCcEEEEec----------
Confidence 4678999999999999999999999999999999999988777777889999999999999999999998
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc--CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG--HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~--h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
+|++....|+++|..+..... ..-.+++.+|||||..|.+|..|+.|+|||+.++.....
T Consensus 323 ------------------~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~ 384 (506)
T KOG0289|consen 323 ------------------NDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAK 384 (506)
T ss_pred ------------------CCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCcccccc
Confidence 999999999999998777653 223589999999999999999999999999999999999
Q ss_pred EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
|.+|.++|.+++|+.+|-|++++++|+.|++||++..+...+++
T Consensus 385 Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~ 428 (506)
T KOG0289|consen 385 FPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQ 428 (506)
T ss_pred CCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceee
Confidence 99999999999999999999999999999999999877555554
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.3e-24 Score=234.85 Aligned_cols=253 Identities=16% Similarity=0.289 Sum_probs=213.8
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECcc------------------CcccccccccccCeEEEEEeCC
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRM------------------NTLLEKFDEHEGPVRGICFHNQ 62 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~------------------~~~l~~~~~h~~~V~~i~fsp~ 62 (641)
++.+...|.+.|+|+.|+|||.+||+|++|+.|.||+... .+.+..+.+|++.|..++|+|+
T Consensus 61 ~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~ 140 (942)
T KOG0973|consen 61 HLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPD 140 (942)
T ss_pred hheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCC
Confidence 3567789999999999999999999999999999999872 1245567889999999999999
Q ss_pred CCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC
Q psy9327 63 QPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD 142 (641)
Q Consensus 63 ~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D 142 (641)
+.++++++ .|++|.+||.++.+.+.++.+|.+.|.++.|.|-|++|+|-++|
T Consensus 141 ~~~lvS~s----------------------------~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdD 192 (942)
T KOG0973|consen 141 DSLLVSVS----------------------------LDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDD 192 (942)
T ss_pred ccEEEEec----------------------------ccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCC
Confidence 99999998 99999999999999999999999999999999999999999999
Q ss_pred CeEEEEECCCCeeEEEEccC------CCCEEEEEEecCCCEEEEEeC----CCeEEEEecCCCceeeeccCCCceeeecc
Q psy9327 143 QTIRIWYWQSRNCICVLTGH------NHYVMCAQFHPTDDIVVSASL----DQTIRVWDISGLRKKNVAPGMGKLVLSMK 212 (641)
Q Consensus 143 g~I~vWd~~~~~~i~~l~~h------~~~V~sl~fsp~g~~lvSgs~----DgtI~IWD~~~~~~~~~~~~~~~~v~s~~ 212 (641)
++|+||+..+-.+.+.+.++ ...++-+.|+|||.+|++... -.++.|.+-.+.+.-..+.||..++.++.
T Consensus 193 rtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvr 272 (942)
T KOG0973|consen 193 RTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVR 272 (942)
T ss_pred ceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEE
Confidence 99999998776666666554 345788999999999998643 34799999988888888999988777644
Q ss_pred cCCCceee-------------eeeeeeeCCCeeEEEec-CCCcceeeecC--CcceEEEEEcCCccEEEEecCCeEEEEE
Q psy9327 213 SKHPIWKY-------------CKPVKYCNPKHTLHICN-RKMEPLCNIHE--NTRVKSGAWDESGVFIYTTSNHIKYAIV 276 (641)
Q Consensus 213 ~~~~v~~~-------------~~~l~s~~~d~~I~i~d-~~~~~~~~~~~--~~~I~sla~~p~g~~L~t~s~~~k~~l~ 276 (641)
..+.++.- ...++.|+.|+++.+|. ....++..+++ ...|..++|+|||..|+.+|.||.+.++
T Consensus 273 FnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i 352 (942)
T KOG0973|consen 273 FNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSLDGTVALI 352 (942)
T ss_pred eChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEecCCeEEEE
Confidence 33332221 01267889999999999 55667777776 7899999999999999999999999887
Q ss_pred cCCCC
Q psy9327 277 NGDHG 281 (641)
Q Consensus 277 ~~~~g 281 (641)
.-+.+
T Consensus 353 ~Fee~ 357 (942)
T KOG0973|consen 353 HFEEK 357 (942)
T ss_pred EcchH
Confidence 76543
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-23 Score=222.05 Aligned_cols=240 Identities=16% Similarity=0.236 Sum_probs=203.1
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccc-cccCeEEEEEeCCCCEEEEeceeeEEeeeceeeeccc
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDE-HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRN 86 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~-h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~ 86 (641)
+.+.|+++.|+++|.+|++|..+|.|.|||..+.+.+..+.. |...|.+++|. +..+.+|+
T Consensus 216 ~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGs---------------- 277 (484)
T KOG0305|consen 216 GEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGS---------------- 277 (484)
T ss_pred CCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc--CceEEEec----------------
Confidence 378999999999999999999999999999999999999998 99999999998 55677776
Q ss_pred CCcceeeEEEeeCCCeEEEEECCCCeeEEE-EccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCC
Q psy9327 87 EPCLFRIKSVLGDDYKIKVWNYKQRKCIFT-LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY 165 (641)
Q Consensus 87 ~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~-~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~ 165 (641)
.|+.|..+|++..+.... +.+|...|+++.|++++.+++||+.|+.+.|||.....++..+..|...
T Consensus 278 ------------r~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aA 345 (484)
T KOG0305|consen 278 ------------RDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAA 345 (484)
T ss_pred ------------CCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEecccee
Confidence 999999999998876555 8899999999999999999999999999999999888999999999999
Q ss_pred EEEEEEec-CCCEEEEEe--CCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCc
Q psy9327 166 VMCAQFHP-TDDIVVSAS--LDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKME 241 (641)
Q Consensus 166 V~sl~fsp-~g~~lvSgs--~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~ 241 (641)
|.+++|+| ...+|++|+ .|++|++||..++..+..... +..|.++......-.++ ...|.+++.|.+|+ ....
T Consensus 346 VKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdt-gsQVcsL~Wsk~~kEi~--sthG~s~n~i~lw~~ps~~ 422 (484)
T KOG0305|consen 346 VKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDT-GSQVCSLIWSKKYKELL--STHGYSENQITLWKYPSMK 422 (484)
T ss_pred eeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEeccccc-CCceeeEEEcCCCCEEE--EecCCCCCcEEEEeccccc
Confidence 99999999 467888865 599999999999888776653 45566555443332322 23456788999999 4455
Q ss_pred ceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCC
Q psy9327 242 PLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 242 ~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~ 280 (641)
.+..+. |..+|..++++|+|..+++++.|..+.+|+.-+
T Consensus 423 ~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~ 462 (484)
T KOG0305|consen 423 LVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFD 462 (484)
T ss_pred eeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccC
Confidence 555544 578899999999999999999999999887543
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-23 Score=198.31 Aligned_cols=234 Identities=14% Similarity=0.320 Sum_probs=196.0
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccc--ccccccCeEEEEEeCC-CCEEEEeceeeEEeeec
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK--FDEHEGPVRGICFHNQ-QPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~--~~~h~~~V~~i~fsp~-~~~l~sgs~~~~~~~~~ 79 (641)
+++++|.+.|.+++|+.+|..|++|+.|+++.+|++........ ..+|.+.|-.++|+|. .+.|++++
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas--------- 84 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATAS--------- 84 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEec---------
Confidence 45789999999999999999999999999999999987755444 3579999999999985 45777776
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC------
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR------ 153 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~------ 153 (641)
.|.+|++||++++++........+.+ -+.|+|+|.+++.++.|..|...|.++.
T Consensus 85 -------------------~dk~ir~wd~r~~k~~~~i~~~~eni-~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~ 144 (313)
T KOG1407|consen 85 -------------------GDKTIRIWDIRSGKCTARIETKGENI-NITWSPDGEYIAVGNKDDRITFIDARTYKIVNEE 144 (313)
T ss_pred -------------------CCceEEEEEeccCcEEEEeeccCcce-EEEEcCCCCEEEEecCcccEEEEEecccceeehh
Confidence 89999999999999998887555554 4789999999999999888888877653
Q ss_pred -----------------------------------eeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCcee
Q psy9327 154 -----------------------------------NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK 198 (641)
Q Consensus 154 -----------------------------------~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~ 198 (641)
+++..+++|.....|+.|+|+|+++++||.|..+.+||++..-+.
T Consensus 145 ~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~ 224 (313)
T KOG1407|consen 145 QFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICE 224 (313)
T ss_pred cccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhh
Confidence 344456789999999999999999999999999999999999999
Q ss_pred eeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecC
Q psy9327 199 NVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSN 269 (641)
Q Consensus 199 ~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~ 269 (641)
+.++.+.=+|..++..|.- -.++++++|+.|-|.+ ..+..+..++..++..+++|+|....|+-++.
T Consensus 225 R~isRldwpVRTlSFS~dg----~~lASaSEDh~IDIA~vetGd~~~eI~~~~~t~tVAWHPk~~LLAyA~d 292 (313)
T KOG1407|consen 225 RCISRLDWPVRTLSFSHDG----RMLASASEDHFIDIAEVETGDRVWEIPCEGPTFTVAWHPKRPLLAYACD 292 (313)
T ss_pred eeeccccCceEEEEeccCc----ceeeccCccceEEeEecccCCeEEEeeccCCceeEEecCCCceeeEEec
Confidence 9888665555544433321 1178999999999999 88999999999999999999999888887654
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=204.07 Aligned_cols=249 Identities=19% Similarity=0.335 Sum_probs=190.5
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc--ccccCeEEEEEeCCCCEEEEeceeeEEeee
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD--EHEGPVRGICFHNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~--~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~ 78 (641)
++++|-.|.+.|+++.|||....|++|+.|++|+++|+......+.|+ ....+|++|.|||.|.++++|.
T Consensus 164 vIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgT-------- 235 (430)
T KOG0640|consen 164 VIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGT-------- 235 (430)
T ss_pred eEeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEec--------
Confidence 478888999999999999999999999999999999997654333332 3457999999999999999997
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE---ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL---LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~---~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
+..++++||+++-++...- .+|.+.|+++.+++.+++.++||.||.|++||=-+++|
T Consensus 236 --------------------dHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rC 295 (430)
T KOG0640|consen 236 --------------------DHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRC 295 (430)
T ss_pred --------------------CCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHH
Confidence 8889999999998886554 35999999999999999999999999999999999999
Q ss_pred EEEEc-cCCC-CEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeee--eeeeCCCe
Q psy9327 156 ICVLT-GHNH-YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKP--VKYCNPKH 231 (641)
Q Consensus 156 i~~l~-~h~~-~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~--l~s~~~d~ 231 (641)
+.++. +|.+ .|.++.|..+|++++|.+.|.++++|.+.+++++....|.|..-...-....+|.-.-. +..-...+
T Consensus 296 v~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~ 375 (430)
T KOG0640|consen 296 VRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASN 375 (430)
T ss_pred HHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccC
Confidence 99884 5654 68999999999999999999999999999999999888753111100000111110000 11112345
Q ss_pred eEEEec-CCC--cceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 232 TLHICN-RKM--EPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 232 ~I~i~d-~~~--~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
.+.-|| ++. ..+....+++.+..+.-+|.+.-+.|++.|-+..+|-
T Consensus 376 slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWy 424 (430)
T KOG0640|consen 376 SLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWY 424 (430)
T ss_pred ceeeccccchhhhhhcccCCCCCceEEEeCCCCCceeeecccceeeeee
Confidence 566677 222 2334445667777777777777777777776666664
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-22 Score=223.00 Aligned_cols=225 Identities=14% Similarity=0.175 Sum_probs=172.6
Q ss_pred EeCCCcEEEEECccCcccccccccccCeEEEEEeCC-CCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEE
Q psy9327 27 SLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ-QPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKV 105 (641)
Q Consensus 27 g~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~-~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~v 105 (641)
|+.+|.|++|+......+..+.+|.++|.+++|+|+ +.+|++|+ .|++|++
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS----------------------------~DgtIrI 101 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGS----------------------------EDLTIRV 101 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEe----------------------------CCCeEEE
Confidence 566889999998777778889999999999999997 78999998 9999999
Q ss_pred EECCCCe--------eEEEEccCCCCeEEEEEccCCCE-EEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCC
Q psy9327 106 WNYKQRK--------CIFTLLGHLDYIRTTFFHHEYPW-ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176 (641)
Q Consensus 106 WD~~t~~--------~~~~~~~h~~~V~~v~fsp~~~~-l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~ 176 (641)
||+.++. ++..+.+|.+.|.+++|||++.. +++|+.|++|++||+++++.+..+. |...|.+++|+|+|.
T Consensus 102 WDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~ 180 (568)
T PTZ00420 102 WEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGN 180 (568)
T ss_pred EECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCC
Confidence 9997642 34578899999999999998875 5799999999999999998887776 668899999999999
Q ss_pred EEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeee-----eeeeeeCCC----eeEEEecCC--Ccceee
Q psy9327 177 IVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYC-----KPVKYCNPK----HTLHICNRK--MEPLCN 245 (641)
Q Consensus 177 ~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~-----~~l~s~~~d----~~I~i~d~~--~~~~~~ 245 (641)
+|++++.|++|+|||+++++....+.+|...+.+.. +|... ..+++++.+ +.|++||.+ ..++..
T Consensus 181 lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~----v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~ 256 (568)
T PTZ00420 181 LLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKN----IWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVT 256 (568)
T ss_pred EEEEEecCCEEEEEECCCCcEEEEEecccCCceeEE----EEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEE
Confidence 999999999999999999998888887754332211 11100 114444333 479999943 445554
Q ss_pred ecCCc--ceEEEEEc-CCccEEEEecCCeEEEEEcCCCCeEe
Q psy9327 246 IHENT--RVKSGAWD-ESGVFIYTTSNHIKYAIVNGDHGIIR 284 (641)
Q Consensus 246 ~~~~~--~I~sla~~-p~g~~L~t~s~~~k~~l~~~~~g~I~ 284 (641)
..... .+....|+ ++|.++++|+.|+.+.+|....+.+.
T Consensus 257 ~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~ 298 (568)
T PTZ00420 257 MSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGSIR 298 (568)
T ss_pred EEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCcEE
Confidence 43322 22223444 45888888888888888877665443
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.2e-23 Score=228.54 Aligned_cols=289 Identities=18% Similarity=0.240 Sum_probs=220.8
Q ss_pred CCCCeEEEEEccCCCeEEEEe--CCCcEEEEECcc------------CcccccccccccCeEEEEEeCCCCEEEEeceee
Q psy9327 8 KSARVKGLSFHPKRPWILSSL--HNGVIQLWDYRM------------NTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMI 73 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~--~dg~I~iWD~~~------------~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~ 73 (641)
+..+|.+++.||+|..+++|| .||.++||+.+. .+++.+...|.+.|+|+.|+|||.+||+|+
T Consensus 12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGS--- 88 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGS--- 88 (942)
T ss_pred CCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeecc---
Confidence 356799999999999999999 899999998641 345666778999999999999999999998
Q ss_pred EEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC------------------CeeEEEEccCCCCeEEEEEccCCCE
Q psy9327 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ------------------RKCIFTLLGHLDYIRTTFFHHEYPW 135 (641)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t------------------~~~~~~~~~h~~~V~~v~fsp~~~~ 135 (641)
+|+.|.||.... .+....+.+|.+.|.+++|+|++.+
T Consensus 89 -------------------------DD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~ 143 (942)
T KOG0973|consen 89 -------------------------DDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSL 143 (942)
T ss_pred -------------------------CcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccE
Confidence 999999999862 2467788999999999999999999
Q ss_pred EEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC-CceeeecccC
Q psy9327 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM-GKLVLSMKSK 214 (641)
Q Consensus 136 l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~-~~~v~s~~~~ 214 (641)
++|+|.|++|.+||.++.+++.++.+|.+.|..+.|.|-|++++|-++|++|+||++......+.+.++ .+...+--.-
T Consensus 144 lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~ 223 (942)
T KOG0973|consen 144 LVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFL 223 (942)
T ss_pred EEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceee
Confidence 999999999999999999999999999999999999999999999999999999998876666655532 1111110011
Q ss_pred CCceeeeee-e----eeeCCCeeEEEecCCC--cceeeecCCcceEEEEEcCC------c-----------cEEEEecCC
Q psy9327 215 HPIWKYCKP-V----KYCNPKHTLHICNRKM--EPLCNIHENTRVKSGAWDES------G-----------VFIYTTSNH 270 (641)
Q Consensus 215 ~~v~~~~~~-l----~s~~~d~~I~i~d~~~--~~~~~~~~~~~I~sla~~p~------g-----------~~L~t~s~~ 270 (641)
.+-|...+. + +.-+...++.|.++.. .....+.|..++.++.|+|. + ..+++|+.|
T Consensus 224 RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqD 303 (942)
T KOG0973|consen 224 RLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQD 303 (942)
T ss_pred ecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCC
Confidence 111221111 1 1123566777777542 12344567789999999964 1 167788899
Q ss_pred eEEEEEcCCCCe-Ee----ccccce--EEEEEcCcEEEEEeCCCCeEEEEeCCcchhhhHH
Q psy9327 271 IKYAIVNGDHGI-IR----TLDLPI--YITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLA 324 (641)
Q Consensus 271 ~k~~l~~~~~g~-I~----~~d~p~--~~~~~~g~~v~~~~~dg~i~v~~~~~~~~~~k~~ 324 (641)
+.+.+|+...-. +. ..+.++ ..|..+|-.++.++-||++.++.+++.++-..+.
T Consensus 304 rSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~ElG~~ls 364 (942)
T KOG0973|consen 304 RSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSLDGTVALIHFEEKELGVALS 364 (942)
T ss_pred ccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEecCCeEEEEEcchHHhCcccC
Confidence 999999863211 10 111222 2367789999999999999999999877654443
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-23 Score=206.91 Aligned_cols=278 Identities=19% Similarity=0.327 Sum_probs=222.7
Q ss_pred CceeeccCCCCeEEEEEccCC-CeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 1 MLTKFETKSARVKGLSFHPKR-PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg-~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
++..+.||.+.|.|++=||.. ..+++|+.||.|+|||+.+.++...|+.|.+.|++|+++. ..++++|
T Consensus 58 Fv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvg--------- 126 (433)
T KOG0268|consen 58 FVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVG--------- 126 (433)
T ss_pred chhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEec---------
Confidence 356789999999999999987 6899999999999999999999999999999999999987 5667776
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l 159 (641)
+|.+|+.|-+.. .+++++.+ ...+.++.-+..+..|+++|. .|-|||.+-..++..+
T Consensus 127 -------------------dDKtvK~wk~~~-~p~~tilg-~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~sm 183 (433)
T KOG0268|consen 127 -------------------DDKTVKQWKIDG-PPLHTILG-KSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSM 183 (433)
T ss_pred -------------------CCcceeeeeccC-Ccceeeec-cccccccccccccccccccCc--eeeecccccCCcccee
Confidence 899999999874 57777763 466778888888888999984 6889999888899999
Q ss_pred ccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceee-eeeeeeeCCCeeEEEec
Q psy9327 160 TGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKY-CKPVKYCNPKHTLHICN 237 (641)
Q Consensus 160 ~~h~~~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~-~~~l~s~~~d~~I~i~d 237 (641)
.--.+.|.++.|+|-. ..|++|..|+.|.+||++........ ++.|....--|.. .+.+.++++|+.+..+|
T Consensus 184 swG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KV------i~~mRTN~IswnPeafnF~~a~ED~nlY~~D 257 (433)
T KOG0268|consen 184 SWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKV------ILTMRTNTICWNPEAFNFVAANEDHNLYTYD 257 (433)
T ss_pred ecCCCceeEEecCCCcchheeeeccCCceEEEecccCCcccee------eeeccccceecCccccceeeccccccceehh
Confidence 8888999999999965 67788889999999999987765543 2333322222222 23377889999999999
Q ss_pred -CCCcc-eeee-cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEecccc-------ceEEEEEcCcEEEEEeCCC
Q psy9327 238 -RKMEP-LCNI-HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDL-------PIYITKIKGNQVYYLDREC 307 (641)
Q Consensus 238 -~~~~~-~~~~-~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~-------p~~~~~~~g~~v~~~~~dg 307 (641)
+.+.. +... .+...|.++.|+|.|.-+++||-|..+.|++.+.+.-|.+-. -...+..+...+++++.|+
T Consensus 258 mR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~ 337 (433)
T KOG0268|consen 258 MRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDG 337 (433)
T ss_pred hhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCc
Confidence 44332 2222 347899999999999999999999999999887776553311 1333667889999999999
Q ss_pred CeEEEEeCCcc
Q psy9327 308 SPHVLRIDPTE 318 (641)
Q Consensus 308 ~i~v~~~~~~~ 318 (641)
.+++|..+..+
T Consensus 338 nvRlWka~Ase 348 (433)
T KOG0268|consen 338 NVRLWKAKASE 348 (433)
T ss_pred ceeeeecchhh
Confidence 99999776543
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.2e-23 Score=204.59 Aligned_cols=272 Identities=17% Similarity=0.295 Sum_probs=207.4
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCC---EEEEeceeeEEeeeceeee
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP---IFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~---~l~sgs~~~~~~~~~~~~~ 83 (641)
.|.+.|.++... +.++++|+.||.+++||. .|+....+.+|.++|.+++|....+ .|++++
T Consensus 103 ~hdDWVSsv~~~--~~~IltgsYDg~~riWd~-~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas------------- 166 (423)
T KOG0313|consen 103 LHDDWVSSVKGA--SKWILTGSYDGTSRIWDL-KGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSAS------------- 166 (423)
T ss_pred cchhhhhhhccc--CceEEEeecCCeeEEEec-CCceEEEEecCCcceeeeEEEecCCccceEEEec-------------
Confidence 477788888777 679999999999999995 6888899999999999999975444 488887
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCee----EEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCC-------
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKC----IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS------- 152 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~----~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~------- 152 (641)
.|.++++|-++.+.. +..-.||.+.|-++...+++..++|||.|.+++||+..+
T Consensus 167 ---------------~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E 231 (423)
T KOG0313|consen 167 ---------------MDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELE 231 (423)
T ss_pred ---------------CCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCcccccc
Confidence 999999999987753 333459999999999999999999999999999999321
Q ss_pred ------------------CeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccC
Q psy9327 153 ------------------RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSK 214 (641)
Q Consensus 153 ------------------~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~ 214 (641)
+.++.++.||..+|.++.|++ ...++|+|.|.+|+.||+.++..+..+.+ ++.+.|+..
T Consensus 232 ~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~-~ksl~~i~~- 308 (423)
T KOG0313|consen 232 SSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTT-NKSLNCISY- 308 (423)
T ss_pred ccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeec-CcceeEeec-
Confidence 246778899999999999997 77899999999999999999988877764 344444332
Q ss_pred CCceeeeeeeeeeCCCeeEEEecCC-----CcceeeecCCcceEEEEEcCCcc-EEEEecCCeEEEEEcCCCC--eEecc
Q psy9327 215 HPIWKYCKPVKYCNPKHTLHICNRK-----MEPLCNIHENTRVKSGAWDESGV-FIYTTSNHIKYAIVNGDHG--IIRTL 286 (641)
Q Consensus 215 ~~v~~~~~~l~s~~~d~~I~i~d~~-----~~~~~~~~~~~~I~sla~~p~g~-~L~t~s~~~k~~l~~~~~g--~I~~~ 286 (641)
+| .+-.+++|++|..+++||.+ ........|...|.++.|+|... .+++++.|+.+.+|+.... .+..+
T Consensus 309 ~~---~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI 385 (423)
T KOG0313|consen 309 SP---LSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDI 385 (423)
T ss_pred cc---ccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceee
Confidence 22 12227889999999999932 22334455678999999999865 5667888888888875432 12211
Q ss_pred ----ccceEEEEEcCcEEEEEeCCCCeEEEEeC
Q psy9327 287 ----DLPIYITKIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 287 ----d~p~~~~~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
|.-+.+--.++..+++++.|.++++..-.
T Consensus 386 ~~h~DKvl~vdW~~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 386 AGHNDKVLSVDWNEGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred ccCCceEEEEeccCCceEEeccCcceEEEeccc
Confidence 11122222345567777777777776544
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-22 Score=203.89 Aligned_cols=238 Identities=19% Similarity=0.309 Sum_probs=210.4
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
..++++...|..+.+++|+.|..+.++|..+++.+..|++|...|+.+.|||+...+++++
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aS------------------- 280 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITAS------------------- 280 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecC-------------------
Confidence 4688888888888999999999999999999999999999999999999999999999998
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc--CCCCEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG--HNHYVM 167 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~--h~~~V~ 167 (641)
.|..|+||.............|+++|+.+..||+|.+|+++++|++..+.|++++.++..... ..-.++
T Consensus 281 ---------ad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~t 351 (506)
T KOG0289|consen 281 ---------ADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYT 351 (506)
T ss_pred ---------CcceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeE
Confidence 999999999988888888889999999999999999999999999999999999998876653 234589
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccC-CCceeeeeeeeeeCCCeeEEEec-CCCcceee
Q psy9327 168 CAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSK-HPIWKYCKPVKYCNPKHTLHICN-RKMEPLCN 245 (641)
Q Consensus 168 sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~-~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~ 245 (641)
+++|||||.++.+|+.|+.++|||+.++.....+++|...|.++... +..| +++...|+.|++|| ++.+...+
T Consensus 352 s~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~-----Lat~add~~V~lwDLRKl~n~kt 426 (506)
T KOG0289|consen 352 SAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYW-----LATAADDGSVKLWDLRKLKNFKT 426 (506)
T ss_pred EeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceE-----EEEEecCCeEEEEEehhhcccce
Confidence 99999999999999999999999999999999999998888775543 3444 55666889999999 66777766
Q ss_pred ecC--CcceEEEEEcCCccEEEEecCCeEEEEEcCCC
Q psy9327 246 IHE--NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 246 ~~~--~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~ 280 (641)
+.- ...+.++.||+.|.+|+.++++.+++++....
T Consensus 427 ~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~ 463 (506)
T KOG0289|consen 427 IQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKT 463 (506)
T ss_pred eeccccccceeEEEcCCCCeEEeecceeEEEEEeccc
Confidence 654 45699999999999999999999999887444
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.7e-24 Score=207.42 Aligned_cols=240 Identities=18% Similarity=0.327 Sum_probs=201.6
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc-ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD-EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~-~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
|--|.++|.|++||.|..++|+|+.||.|++|.+++|.++++|+ .|+..|+|+.|+.|+..+++++
T Consensus 259 fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~s------------- 325 (508)
T KOG0275|consen 259 FMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSAS------------- 325 (508)
T ss_pred eeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhccc-------------
Confidence 45578999999999999999999999999999999999999998 8999999999999999999998
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc--
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG-- 161 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~-- 161 (641)
.|.++++.-+++|+++..|.+|...|+...|.++|..++++|.||+|++|+.++.+|+.+|+.
T Consensus 326 ---------------fD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~ 390 (508)
T KOG0275|consen 326 ---------------FDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLG 390 (508)
T ss_pred ---------------ccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999973
Q ss_pred CCCCEEEEEEecCC-CEEEEEeCCCeEEEEecCCCceeeeccC---CCceeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 162 HNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPG---MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 162 h~~~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~~~~~~~~~~---~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
..-+|.++-.-|.+ ..++.|....++.|-++++.-......| .|..+.+......-|.+|.. .|+.+..++
T Consensus 391 ~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcig-----ED~vlYCF~ 465 (508)
T KOG0275|consen 391 TDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFSSGKREGGDFINAILSPKGEWIYCIG-----EDGVLYCFS 465 (508)
T ss_pred CcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeeccCCccCCceEEEEecCCCcEEEEEc-----cCcEEEEEE
Confidence 44568888888854 6788899999999999987544333333 24666665666666766554 777777777
Q ss_pred -CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 238 -RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 238 -~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
..+..-.++. +...+..++-+|..+.+++-++|+.+.+|.
T Consensus 466 ~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 466 VLSGKLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred eecCceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence 3333333332 355677899999999999999888888874
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.4e-24 Score=214.95 Aligned_cols=274 Identities=18% Similarity=0.264 Sum_probs=223.4
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc--ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT--LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~--~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
..++.|.+.|..+.|-++...|++|+.|..|++|+....+ .+.++.+..++|+.+.|.+++..+++++
T Consensus 169 ~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas---------- 238 (459)
T KOG0288|consen 169 FVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAAS---------- 238 (459)
T ss_pred hhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeec----------
Confidence 3567899999999999998999999999999999987665 6777888889999999999999999997
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~ 160 (641)
+|+.+++|+....+...++.+|.+.|+++.|......+++|+.|.+|+.||++...|..+..
T Consensus 239 ------------------~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l 300 (459)
T KOG0288|consen 239 ------------------NDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVL 300 (459)
T ss_pred ------------------CCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheecccc
Confidence 99999999999999999999999999999999877779999999999999999999887765
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCC
Q psy9327 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKM 240 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~ 240 (641)
....+..+..+ +..++||..|++||+||+++..+....+.++ .|.++.-.+.- ..+.+++.|.++.+.|.+.
T Consensus 301 -~~S~cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg-~vtSl~ls~~g----~~lLsssRDdtl~viDlRt 372 (459)
T KOG0288|consen 301 -PGSQCNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRSVPLGG-RVTSLDLSMDG----LELLSSSRDDTLKVIDLRT 372 (459)
T ss_pred -ccccccceEec--ceeeeecccccceEEEeccCCceeeEeecCc-ceeeEeeccCC----eEEeeecCCCceeeeeccc
Confidence 33455555554 6678999999999999999999999888765 44443322211 1266778999999999555
Q ss_pred cceee-ec-----CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe-ccccc-------eEEEEEcCcEEEEEeCC
Q psy9327 241 EPLCN-IH-----ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR-TLDLP-------IYITKIKGNQVYYLDRE 306 (641)
Q Consensus 241 ~~~~~-~~-----~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~-~~d~p-------~~~~~~~g~~v~~~~~d 306 (641)
..+.. +. .....+.+.|+|++.|+++||.+|.++||+...|.+. .+..+ ...|...|.-+.+.+++
T Consensus 373 ~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~ 452 (459)
T KOG0288|consen 373 KEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQ 452 (459)
T ss_pred ccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCC
Confidence 44332 22 2556888999999999999999999999998888764 22221 22355677888888888
Q ss_pred CCeEEE
Q psy9327 307 CSPHVL 312 (641)
Q Consensus 307 g~i~v~ 312 (641)
+.+.+|
T Consensus 453 ~~v~lW 458 (459)
T KOG0288|consen 453 KAVTLW 458 (459)
T ss_pred cceEec
Confidence 888877
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.5e-23 Score=211.66 Aligned_cols=281 Identities=15% Similarity=0.191 Sum_probs=203.2
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc----cccccc-ccccCeEEEEEeCCCCEEEEec--e-----
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT----LLEKFD-EHEGPVRGICFHNQQPIFVSGG--K----- 71 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~----~l~~~~-~h~~~V~~i~fsp~~~~l~sgs--~----- 71 (641)
+|++|+..|.++++.|.|.+|++|+.|.+|++||+.... ..+.++ .-...|+++.|++.+..|++.+ .
T Consensus 162 ~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~ 241 (641)
T KOG0772|consen 162 QLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLL 241 (641)
T ss_pred eccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEE
Confidence 578999999999999999999999999999999986432 222232 2356899999999888665543 1
Q ss_pred --------------------eeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe-eEEEEc-----cCCCCeE
Q psy9327 72 --------------------MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK-CIFTLL-----GHLDYIR 125 (641)
Q Consensus 72 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~-~~~~~~-----~h~~~V~ 125 (641)
....+|...+.+++++|.....+.+++.||++++||+...+ .+..++ +..-+++
T Consensus 242 DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~t 321 (641)
T KOG0772|consen 242 DRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVT 321 (641)
T ss_pred ccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCce
Confidence 11234455778899999999999999999999999997653 233333 2334789
Q ss_pred EEEEccCCCEEEEEeCCCeEEEEECCCCe---eEEEEccCCC--CEEEEEEecCCCEEEEEeCCCeEEEEecCCCce-ee
Q psy9327 126 TTFFHHEYPWILSASDDQTIRIWYWQSRN---CICVLTGHNH--YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK-KN 199 (641)
Q Consensus 126 ~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~---~i~~l~~h~~--~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~-~~ 199 (641)
.|+|++++++||+|+.||.|.+|+..+.. ....-.+|.. .|+|+.||++|+.|+|-+.|+++++||++..+. +.
T Consensus 322 sC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~ 401 (641)
T KOG0772|consen 322 SCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLN 401 (641)
T ss_pred eeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchh
Confidence 99999999999999999999999986543 2334467887 899999999999999999999999999987654 33
Q ss_pred eccCCC-ceeeecccCCCceeeee---eeeeeCCCeeEEEec-CCCcceeeecC-CcceEEEEEcCCccEEEEecCCeEE
Q psy9327 200 VAPGMG-KLVLSMKSKHPIWKYCK---PVKYCNPKHTLHICN-RKMEPLCNIHE-NTRVKSGAWDESGVFIYTTSNHIKY 273 (641)
Q Consensus 200 ~~~~~~-~~v~s~~~~~~v~~~~~---~l~s~~~d~~I~i~d-~~~~~~~~~~~-~~~I~sla~~p~g~~L~t~s~~~k~ 273 (641)
...+.. .+-..-..+.|--.+.+ ++.-+...+.+.++| .++..+..+.- +..|..+.|+|.-+.|..|+.+|..
T Consensus 402 ~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~ 481 (641)
T KOG0772|consen 402 VRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAGSGDGTA 481 (641)
T ss_pred hhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheeeecCCCce
Confidence 333321 11111122223222211 122223456889999 55666665554 7789999999998888888877777
Q ss_pred EEEcCCCCeEe
Q psy9327 274 AIVNGDHGIIR 284 (641)
Q Consensus 274 ~l~~~~~g~I~ 284 (641)
.++-..+..+|
T Consensus 482 ~vyYdp~~S~R 492 (641)
T KOG0772|consen 482 HVYYDPNESIR 492 (641)
T ss_pred EEEECcccccc
Confidence 66654444444
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-23 Score=219.05 Aligned_cols=298 Identities=18% Similarity=0.230 Sum_probs=230.6
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC--cccccccccccCeEEEEE-eCCCCEEEEeceeeEEeee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN--TLLEKFDEHEGPVRGICF-HNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~--~~l~~~~~h~~~V~~i~f-sp~~~~l~sgs~~~~~~~~ 78 (641)
+.+++.|++.|+.+....+|+-|+|++.|-+|++|+...+ -++.++..|..-|.|++. .++...+++||
T Consensus 66 ~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgG-------- 137 (735)
T KOG0308|consen 66 IASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGG-------- 137 (735)
T ss_pred hhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecC--------
Confidence 4578999999999999999999999999999999999876 467788899999999999 78889999998
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCC--eeEEEE--------c-cCCCCeEEEEEccCCCEEEEEeCCCeEEE
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR--KCIFTL--------L-GHLDYIRTTFFHHEYPWILSASDDQTIRI 147 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~--~~~~~~--------~-~h~~~V~~v~fsp~~~~l~sgs~Dg~I~v 147 (641)
-|+.|.+||++++ +.+.++ . |+.++|.+++.++.+..|++|+..+.+++
T Consensus 138 --------------------LD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~ 197 (735)
T KOG0308|consen 138 --------------------LDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRL 197 (735)
T ss_pred --------------------CCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEE
Confidence 9999999999988 333332 2 78889999999999999999999999999
Q ss_pred EECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeee
Q psy9327 148 WYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYC 227 (641)
Q Consensus 148 Wd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~ 227 (641)
||.++++.+..+.||++.|+++..++||..++|+|.||+|++||+...+++.++..|...|.++... |-+.. +.+|
T Consensus 198 wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~-~sf~~---vYsG 273 (735)
T KOG0308|consen 198 WDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSS-PSFTH---VYSG 273 (735)
T ss_pred eccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeC-CCcce---EEec
Confidence 9999999999999999999999999999999999999999999999999999998777777765544 22222 6788
Q ss_pred CCCeeEEEec-CC-CcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe----------------Eeccc--
Q psy9327 228 NPKHTLHICN-RK-MEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI----------------IRTLD-- 287 (641)
Q Consensus 228 ~~d~~I~i~d-~~-~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~----------------I~~~d-- 287 (641)
+.++.|..-| ++ ......+.+..+|..+..+....-++.++.++++.-|.++-.. ....+
T Consensus 274 ~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~~~l~~s~~~~~~~T~~~~~~~~~~ 353 (735)
T KOG0308|consen 274 GRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEPDIALSVSGDLDFFSTDSNNHSCDLT 353 (735)
T ss_pred CCCCcEEecccCCchhheEeecCCCchhhhhhccccCCceeeeccccceecCCccccccccCCCCCcccccCCCcccccc
Confidence 8999998888 33 2334444567788777777443333555555555544322110 00111
Q ss_pred -cceEEEE-----------EcCcEEEEEeCCCCeEEEEeCCcchhhhHHHhccchHHH
Q psy9327 288 -LPIYITK-----------IKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEV 333 (641)
Q Consensus 288 -~p~~~~~-----------~~g~~v~~~~~dg~i~v~~~~~~~~~~k~~l~~~~~~~~ 333 (641)
.|.+..+ .+...+.+-+..|.+..|++-..+-.-... +.+|+++
T Consensus 354 ~tp~~vi~Gg~ai~k~~mL~dkRhVlTkDa~gnv~lwDIl~~~~~~d~g--k~~FE~i 409 (735)
T KOG0308|consen 354 NTPDSVIPGGAAIKKHAMLNDKRHVLTKDAKGNVALWDILACVKVEDFG--KVDFEEI 409 (735)
T ss_pred CCCceeccCchhhhhhhhhcCcceEeeecCCCCEEEEEeeeeeehhhcc--cccHHHH
Confidence 1222111 356788999999999999887655443333 5556544
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.3e-22 Score=213.31 Aligned_cols=283 Identities=16% Similarity=0.182 Sum_probs=234.7
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
++.||.+.|.+++||.+...++||+ .+.+++|+..+.++++++.. +-+.+..|.|.++++++|.
T Consensus 368 ~~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~kciRTi~~--~y~l~~~Fvpgd~~Iv~G~------------- 431 (888)
T KOG0306|consen 368 EIGGHRSDVRSLCVSSDSILLASGA-GESIKIWNRDTLKCIRTITC--GYILASKFVPGDRYIVLGT------------- 431 (888)
T ss_pred eeccchhheeEEEeecCceeeeecC-CCcEEEEEccCcceeEEecc--ccEEEEEecCCCceEEEec-------------
Confidence 5679999999999999987777775 57899999999999999854 3889999999999999998
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCC-----Ce--eE
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS-----RN--CI 156 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~-----~~--~i 156 (641)
..|.+.++|+.+...+.+.++|++.+..++.+||+..+++||.|.+|++||... +. ..
T Consensus 432 ---------------k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~ 496 (888)
T KOG0306|consen 432 ---------------KNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKV 496 (888)
T ss_pred ---------------cCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCccccee
Confidence 999999999999999999999999999999999999999999999999999742 11 11
Q ss_pred ------EEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCC
Q psy9327 157 ------CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPK 230 (641)
Q Consensus 157 ------~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d 230 (641)
.++ .-.+.|.|+.+||||.+++.+=.|.+|+||-+.+.+..-.+-||.-+|.||.-.+.- ..+++|+.|
T Consensus 497 lsl~~~rtL-el~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DS----klivTgSAD 571 (888)
T KOG0306|consen 497 LSLKHTRTL-ELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDS----KLIVTGSAD 571 (888)
T ss_pred eeeccceEE-eccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCc----CeEEeccCC
Confidence 122 246779999999999999999999999999999999988999999999987744321 227899999
Q ss_pred eeEEEecCC-Ccceeee-cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCC-eEeccccc-----eEEEEEcCcEEEE
Q psy9327 231 HTLHICNRK-MEPLCNI-HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG-IIRTLDLP-----IYITKIKGNQVYY 302 (641)
Q Consensus 231 ~~I~i~d~~-~~~~~~~-~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g-~I~~~d~p-----~~~~~~~g~~v~~ 302 (641)
.+|++|-.. +.+-+++ .|...|.++.|-|+...+++++.|+++.-|+++.= .|+.++.. .-+...+|..+++
T Consensus 572 KnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs 651 (888)
T KOG0306|consen 572 KNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVS 651 (888)
T ss_pred CceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEe
Confidence 999999854 4444444 45789999999999999999999999999987642 34444332 1223467899999
Q ss_pred EeCCCCeEEEEeCCcchhhh
Q psy9327 303 LDRECSPHVLRIDPTEFKFK 322 (641)
Q Consensus 303 ~~~dg~i~v~~~~~~~~~~k 322 (641)
.+.|.+++.|........++
T Consensus 652 ~shD~sIRlwE~tde~~~lE 671 (888)
T KOG0306|consen 652 SSHDKSIRLWERTDEILILE 671 (888)
T ss_pred ccCCceeEeeeccCcceeee
Confidence 99999999998877544433
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-22 Score=194.87 Aligned_cols=241 Identities=18% Similarity=0.254 Sum_probs=196.4
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCC--EEEEeceeeEEeeece
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP--IFVSGGKMIVMAYQGC 80 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~--~l~sgs~~~~~~~~~~ 80 (641)
-.|+.|.++|++++.+ |+++|+||.|-+|+|||+++...+..+-.|.+.|+++.|.+... +|++|+
T Consensus 37 F~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~s---------- 104 (362)
T KOG0294|consen 37 FAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGS---------- 104 (362)
T ss_pred ccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeec----------
Confidence 3578999999999995 89999999999999999999999999999999999999998765 899998
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~ 160 (641)
+||.|.+|+.....++.++++|.+.|+.++.||.+++-++.+.|+.++.||+-.++.-+.++
T Consensus 105 ------------------dDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~ 166 (362)
T KOG0294|consen 105 ------------------DDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLN 166 (362)
T ss_pred ------------------CCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeec
Confidence 99999999999999999999999999999999999999999999999999999888666554
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC-
Q psy9327 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK- 239 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~- 239 (641)
-...-+.+.|+|.|..++.++.+ .|-||.+.+.+....+... ..+.++. |.....+.+|..+..|.+||..
T Consensus 167 -L~~~at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v~~~i~~~-~r~l~~~-----~l~~~~L~vG~d~~~i~~~D~ds 238 (362)
T KOG0294|consen 167 -LKNKATLVSWSPQGDHFVVSGRN-KIDIYQLDNASVFREIENP-KRILCAT-----FLDGSELLVGGDNEWISLKDTDS 238 (362)
T ss_pred -cCCcceeeEEcCCCCEEEEEecc-EEEEEecccHhHhhhhhcc-ccceeee-----ecCCceEEEecCCceEEEeccCC
Confidence 23344559999999988887766 7899998875554443321 1122211 1122226788899999999954
Q ss_pred Ccceeeec-CCcceEEEEE--cCCccEEEEecCCeEEEEEcCCCC
Q psy9327 240 MEPLCNIH-ENTRVKSGAW--DESGVFIYTTSNHIKYAIVNGDHG 281 (641)
Q Consensus 240 ~~~~~~~~-~~~~I~sla~--~p~g~~L~t~s~~~k~~l~~~~~g 281 (641)
..+...+. +..+|.++.+ +|.+.+|+|.++||.+.+|+.+..
T Consensus 239 ~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 239 DTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred CccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence 66665554 5889999883 467899999999999999986543
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-23 Score=197.21 Aligned_cols=243 Identities=19% Similarity=0.264 Sum_probs=204.4
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+.+|+||++.|.+...+.+-.+.|+++.|-+-++||.-+|..+.+| .|..-|+.++|+.|..+|++|+
T Consensus 52 igtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf-~hkhivk~~af~~ds~~lltgg----------- 119 (334)
T KOG0278|consen 52 IGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSF-EHKHIVKAVAFSQDSNYLLTGG----------- 119 (334)
T ss_pred EEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhh-hhhheeeeEEecccchhhhccc-----------
Confidence 5789999999999999999889999999999999999999999999 5999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCC-eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~-~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~ 160 (641)
.+..++|+|++.. .+...+.+|.+.|+.+-|....+.|+|+++|++||+||.+++..++++.
T Consensus 120 -----------------~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~ 182 (334)
T KOG0278|consen 120 -----------------QEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLE 182 (334)
T ss_pred -----------------hHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEe
Confidence 9999999999875 3567789999999999999999999999999999999999999999887
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CC
Q psy9327 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RK 239 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~ 239 (641)
-+.+|+++..+++|++|.++ ..+.|++||..+...+....-. -.|.+ +.-||--.+ +..|+.|.-+..|| ..
T Consensus 183 -~~s~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~lKs~k~P-~nV~S-ASL~P~k~~---fVaGged~~~~kfDy~T 255 (334)
T KOG0278|consen 183 -FNSPVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGLLKSYKMP-CNVES-ASLHPKKEF---FVAGGEDFKVYKFDYNT 255 (334)
T ss_pred -cCCCCcceeeccCCCEEEEe-cCceeEEeccccccceeeccCc-ccccc-ccccCCCce---EEecCcceEEEEEeccC
Confidence 56789999999999877654 5679999999998776655321 11211 222332211 56777899999999 55
Q ss_pred Ccceeee--cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCC
Q psy9327 240 MEPLCNI--HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 240 ~~~~~~~--~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~ 280 (641)
++.+..+ .+.++|.++.|+|+|..-++||.||.+.+|....
T Consensus 256 geEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~ 298 (334)
T KOG0278|consen 256 GEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTP 298 (334)
T ss_pred CceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecC
Confidence 6666554 4578999999999999999999999999997543
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.9e-22 Score=198.44 Aligned_cols=244 Identities=24% Similarity=0.398 Sum_probs=200.0
Q ss_pred ceeeccCCCCeEEEEEccCCC---eEEEEeCCCcEEEEECccCcc----cccccccccCeEEEEEeCCCCEEEEeceeeE
Q psy9327 2 LTKFETKSARVKGLSFHPKRP---WILSSLHNGVIQLWDYRMNTL----LEKFDEHEGPVRGICFHNQQPIFVSGGKMIV 74 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~---~Lasg~~dg~I~iWD~~~~~~----l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~ 74 (641)
+..+.||.++|.+++|....+ .+++++.|.++++|.++.++. +....+|..+|-+++..+++..+++|+
T Consensus 137 ~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS---- 212 (423)
T KOG0313|consen 137 IKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGS---- 212 (423)
T ss_pred EEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeec----
Confidence 357889999999998876544 499999999999999987754 344469999999999999999999998
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEEC-------------------------CCCeeEEEEccCCCCeEEEEE
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNY-------------------------KQRKCIFTLLGHLDYIRTTFF 129 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~-------------------------~t~~~~~~~~~h~~~V~~v~f 129 (641)
.|.+|.+|+. .++.++-++.||.++|.++.|
T Consensus 213 ------------------------~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w 268 (423)
T KOG0313|consen 213 ------------------------WDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVW 268 (423)
T ss_pred ------------------------ccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEE
Confidence 9999999993 123467788999999999999
Q ss_pred ccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce---eeeccCCCc
Q psy9327 130 HHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK---KNVAPGMGK 206 (641)
Q Consensus 130 sp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~---~~~~~~~~~ 206 (641)
++ ...+.|+|.|.+|+.||+.++.++.++.+ +....|+..+|..++|++||.|..+|+||.+++.. ..++.+|..
T Consensus 269 ~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~n 346 (423)
T KOG0313|consen 269 SD-ATVIYSVSWDHTIKVWDLETGGLKSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKN 346 (423)
T ss_pred cC-CCceEeecccceEEEEEeecccceeeeec-CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchh
Confidence 98 56799999999999999999999988874 46789999999999999999999999999987643 355667777
Q ss_pred eeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCc-ceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCC
Q psy9327 207 LVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKME-PLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 207 ~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~-~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~ 279 (641)
.|.++.. +|... +.+++++.|+++++|| +... ++..+. +...|.++.|.. +..+++|+.|.++.++.+.
T Consensus 347 wVssvkw-sp~~~--~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~-~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 347 WVSSVKW-SPTNE--FQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNE-GGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred hhhheec-CCCCc--eEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccC-CceEEeccCcceEEEeccc
Confidence 7765432 22211 2277899999999999 3333 666665 478999999985 5789999999998887654
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-21 Score=189.64 Aligned_cols=252 Identities=17% Similarity=0.284 Sum_probs=205.8
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
+.|..-.+.|+++.|+++|.++++++.|.+++|||..+++.++++..+.-.|..+.|......++.++.
T Consensus 8 k~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sSt----------- 76 (311)
T KOG1446|consen 8 KVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSST----------- 76 (311)
T ss_pred cccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccC-----------
Confidence 456666789999999999999999999999999999999999999988889999999776666665551
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h 162 (641)
-.|.+|+..++.+.+.++.|.||...|..++.+|-+..|+|++.|++|++||++..+|...+.-.
T Consensus 77 ---------------k~d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~ 141 (311)
T KOG1446|consen 77 ---------------KEDDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLS 141 (311)
T ss_pred ---------------CCCCceEEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecC
Confidence 26899999999999999999999999999999999999999999999999999999988777533
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcc
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEP 242 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~ 242 (641)
.. ..++|.|+|-.++++.....|++||+++...- |.-... .
T Consensus 142 ~~--pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkg-----------------PF~tf~------------------i-- 182 (311)
T KOG1446|consen 142 GR--PIAAFDPEGLIFALANGSELIKLYDLRSFDKG-----------------PFTTFS------------------I-- 182 (311)
T ss_pred CC--cceeECCCCcEEEEecCCCeEEEEEecccCCC-----------------CceeEc------------------c--
Confidence 33 35789999999999999889999999874210 100000 0
Q ss_pred eeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe-cc-------ccceEE-EEEcCcEEEEEeCCCCeEEEE
Q psy9327 243 LCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR-TL-------DLPIYI-TKIKGNQVYYLDRECSPHVLR 313 (641)
Q Consensus 243 ~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~-~~-------d~p~~~-~~~~g~~v~~~~~dg~i~v~~ 313 (641)
......+.+.+.|+|+|+++..+++.+.+.+.+.-+|++. .+ ..|+.+ +.++++.+++++.||++.+|+
T Consensus 183 --~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~ 260 (311)
T KOG1446|consen 183 --TDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWN 260 (311)
T ss_pred --CCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEE
Confidence 0023567788999999999999999999998888888754 22 223333 448899999999999999999
Q ss_pred eCCcchhh
Q psy9327 314 IDPTEFKF 321 (641)
Q Consensus 314 ~~~~~~~~ 321 (641)
++++.-+.
T Consensus 261 ~~tg~~v~ 268 (311)
T KOG1446|consen 261 LETGKKVA 268 (311)
T ss_pred cCCCcEee
Confidence 97765443
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.2e-24 Score=226.97 Aligned_cols=235 Identities=21% Similarity=0.377 Sum_probs=211.4
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
+++-.|+..|.++..-..++.+++|+.|..+-+|.......+..|.+|+++|.++.|+++..++++|+
T Consensus 22 ~~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~Llaags------------ 89 (825)
T KOG0267|consen 22 REFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGS------------ 89 (825)
T ss_pred hhhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhcccc------------
Confidence 46678999999999877888999999999999999988878888999999999999999999999997
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h 162 (641)
.+|+|++||++.++.++++.+|...+..++|||-+.++++|+.|+.+++||.+...|.+.+.+|
T Consensus 90 ----------------asgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~ 153 (825)
T KOG0267|consen 90 ----------------ASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSH 153 (825)
T ss_pred ----------------cCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC-Cc
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK-ME 241 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~-~~ 241 (641)
...|.++.|+|+|.|+++|++|.+++|||...++....+.+|...+.++. +||.-. .+.+|+.|.++++||.+ .+
T Consensus 154 ~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle-~hp~e~---Lla~Gs~d~tv~f~dletfe 229 (825)
T KOG0267|consen 154 TRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLE-FHPLEV---LLAPGSSDRTVRFWDLETFE 229 (825)
T ss_pred cceeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccccc-cCchhh---hhccCCCCceeeeeccceeE
Confidence 99999999999999999999999999999999999999998877777655 666332 26789999999999955 55
Q ss_pred ceeeecC-CcceEEEEEcCCccEEEEecC
Q psy9327 242 PLCNIHE-NTRVKSGAWDESGVFIYTTSN 269 (641)
Q Consensus 242 ~~~~~~~-~~~I~sla~~p~g~~L~t~s~ 269 (641)
.+..... ...|.+.+|+|+|..+++|..
T Consensus 230 ~I~s~~~~~~~v~~~~fn~~~~~~~~G~q 258 (825)
T KOG0267|consen 230 VISSGKPETDGVRSLAFNPDGKIVLSGEQ 258 (825)
T ss_pred EeeccCCccCCceeeeecCCceeeecCch
Confidence 5555443 678999999999999988863
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.4e-22 Score=192.68 Aligned_cols=266 Identities=15% Similarity=0.181 Sum_probs=184.6
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc-----cccccccccCeEEEEEeCCCCEEEEece----e
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL-----LEKFDEHEGPVRGICFHNQQPIFVSGGK----M 72 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~-----l~~~~~h~~~V~~i~fsp~~~~l~sgs~----~ 72 (641)
+..+++|.+.|++++|+.||+.|++++.|++|++||++.-+. ++.- -.-+.-+.+.|+||.+-++.... .
T Consensus 79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~n-ve~dhpT~V~FapDc~s~vv~~~~g~~l 157 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQN-VEYDHPTRVVFAPDCKSVVVSVKRGNKL 157 (420)
T ss_pred hhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhcc-ccCCCceEEEECCCcceEEEEEccCCEE
Confidence 457899999999999999999999999999999999875321 1111 11235577999999886665542 1
Q ss_pred eEEee----ecee-eeccc------------------CCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEE
Q psy9327 73 IVMAY----QGCI-LESRN------------------EPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF 129 (641)
Q Consensus 73 ~~~~~----~~~~-~~~~~------------------~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~f 129 (641)
..+.. +|.. ..... .-+...+.++++.|..|.+||++ |+.+.++......-...+.
T Consensus 158 ~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aav 236 (420)
T KOG2096|consen 158 CVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAV 236 (420)
T ss_pred EEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeeccccccccceee
Confidence 11111 1100 00000 00223577799999999999999 9999999887777888999
Q ss_pred ccCCCEEEEEeCCCeEEEEECC---CC-----eeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce----
Q psy9327 130 HHEYPWILSASDDQTIRIWYWQ---SR-----NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK---- 197 (641)
Q Consensus 130 sp~~~~l~sgs~Dg~I~vWd~~---~~-----~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~---- 197 (641)
+|+|+++++++..-.|++|..- .| ...+.|+||...|..++|+|+...++|+|.||++|+||+.-.-.
T Consensus 237 SP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qD 316 (420)
T KOG2096|consen 237 SPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQD 316 (420)
T ss_pred CCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCC
Confidence 9999999999999999999862 22 35678899999999999999999999999999999999864221
Q ss_pred eeeccCCCceeeecccCCCceee---eeeeeeeCCCeeEEEec-CCCcceeeec--CCcceEEEEEcCCccEEEEecCC
Q psy9327 198 KNVAPGMGKLVLSMKSKHPIWKY---CKPVKYCNPKHTLHICN-RKMEPLCNIH--ENTRVKSGAWDESGVFIYTTSNH 270 (641)
Q Consensus 198 ~~~~~~~~~~v~s~~~~~~v~~~---~~~l~s~~~d~~I~i~d-~~~~~~~~~~--~~~~I~sla~~p~g~~L~t~s~~ 270 (641)
...+.. +....+.+...|+..- ...+...+.+..+.++. .+++..-.+. ++..|.+++|+++|++++|+++.
T Consensus 317 pk~Lk~-g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcGdr 394 (420)
T KOG2096|consen 317 PKILKE-GSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCGDR 394 (420)
T ss_pred chHhhc-CCcchhhcCCCceEEEeCCCCcEEEeecCCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeecce
Confidence 111211 1111122223332111 01134445566777776 3344333332 47899999999999999998754
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.7e-22 Score=204.05 Aligned_cols=233 Identities=18% Similarity=0.271 Sum_probs=196.4
Q ss_pred ccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
++|.+.|.+++.||||+|||+|+.|..|+|||.++.+.+..|.+|.+.|.+++|-.....+.+++
T Consensus 199 ~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s--------------- 263 (479)
T KOG0299|consen 199 KGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSAS--------------- 263 (479)
T ss_pred ccccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeee---------------
Confidence 48999999999999999999999999999999999999999999999999999999888899997
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY 165 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~ 165 (641)
.|.+|++|+++....+.++.+|.+.|.++.-..-++.+-+|+.|+++++|++.. .....+.+|.+.
T Consensus 264 -------------~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~e-esqlifrg~~~s 329 (479)
T KOG0299|consen 264 -------------ADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPE-ESQLIFRGGEGS 329 (479)
T ss_pred -------------cCCceEEEehhHhHHHHHHhCCccceeeechhcccceEEeccccceeEEEeccc-cceeeeeCCCCC
Confidence 999999999999999999999999999999988888888888999999999954 334568899999
Q ss_pred EEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeee-cccCCCceeeeee-------eeeeCCCeeEEEec
Q psy9327 166 VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLS-MKSKHPIWKYCKP-------VKYCNPKHTLHICN 237 (641)
Q Consensus 166 V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s-~~~~~~v~~~~~~-------l~s~~~d~~I~i~d 237 (641)
+-|++|- +...++|||+||.|.+|++...+.+.+........-- -...+|.|..+.. +++|+.+|.|++|-
T Consensus 330 idcv~~I-n~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~ 408 (479)
T KOG0299|consen 330 IDCVAFI-NDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWK 408 (479)
T ss_pred eeeEEEe-cccceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEE
Confidence 9999997 4567899999999999999988877765421111100 0122334544332 78889999999998
Q ss_pred -----CCCcceeeecCCcceEEEEEcCCccEEEEec
Q psy9327 238 -----RKMEPLCNIHENTRVKSGAWDESGVFIYTTS 268 (641)
Q Consensus 238 -----~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s 268 (641)
+...++..+.-.+.|++++|+++|.++++|.
T Consensus 409 i~~g~r~i~~l~~ls~~GfVNsl~f~~sgk~ivagi 444 (479)
T KOG0299|consen 409 IEDGLRAINLLYSLSLVGFVNSLAFSNSGKRIVAGI 444 (479)
T ss_pred ecCCccccceeeecccccEEEEEEEccCCCEEEEec
Confidence 2356777777789999999999999888875
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=196.96 Aligned_cols=240 Identities=20% Similarity=0.345 Sum_probs=185.1
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECc------c----------------------------------C
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYR------M----------------------------------N 41 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~------~----------------------------------~ 41 (641)
|.+|.||.+.|+++.||+.+.++++++.|++-.||.+. . .
T Consensus 183 L~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiR 262 (481)
T KOG0300|consen 183 LATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIR 262 (481)
T ss_pred eeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceee
Confidence 67899999999999999999999999999999999731 1 0
Q ss_pred cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCC
Q psy9327 42 TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL 121 (641)
Q Consensus 42 ~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~ 121 (641)
.++..+.+|.+.|.+..|-..+..+++++ .|.+..+||+++|.++..+.||+
T Consensus 263 vPl~~ltgH~~vV~a~dWL~gg~Q~vTaS----------------------------WDRTAnlwDVEtge~v~~LtGHd 314 (481)
T KOG0300|consen 263 VPLMRLTGHRAVVSACDWLAGGQQMVTAS----------------------------WDRTANLWDVETGEVVNILTGHD 314 (481)
T ss_pred eeeeeeeccccceEehhhhcCcceeeeee----------------------------ccccceeeeeccCceeccccCcc
Confidence 12334556666777777766666777765 99999999999999999999999
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEECCCC-eeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce-ee
Q psy9327 122 DYIRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK-KN 199 (641)
Q Consensus 122 ~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~-~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~-~~ 199 (641)
...+.++-||.++++++++.|.+.++||++.. ..+..|.||.+.|+++.|.. +..++|||+|.+|+|||+++.+. +.
T Consensus 315 ~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~-dd~vVSgSDDrTvKvWdLrNMRsplA 393 (481)
T KOG0300|consen 315 SELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNT-DDRVVSGSDDRTVKVWDLRNMRSPLA 393 (481)
T ss_pred hhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEec-CCceeecCCCceEEEeeeccccCcce
Confidence 99999999999999999999999999999843 35678999999999999985 55789999999999999988654 23
Q ss_pred eccCCCcee--eecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeec------CCcceEEEEEcCCc--cEEEEecC
Q psy9327 200 VAPGMGKLV--LSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIH------ENTRVKSGAWDESG--VFIYTTSN 269 (641)
Q Consensus 200 ~~~~~~~~v--~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~------~~~~I~sla~~p~g--~~L~t~s~ 269 (641)
++.. ...+ ..+...+|+..+ --....|++||.++..+..++ +...|.|++|..+. .-|++++-
T Consensus 394 TIRt-dS~~NRvavs~g~~iIAi------PhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGF 466 (481)
T KOG0300|consen 394 TIRT-DSPANRVAVSKGHPIIAI------PHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGF 466 (481)
T ss_pred eeec-CCccceeEeecCCceEEe------ccCCceEEEEecCCCccccCCcccccccceeeeeeeccccCcccccccccc
Confidence 3321 1111 112233443221 124567999998888877766 35678999998652 44667776
Q ss_pred CeEEEEEc
Q psy9327 270 HIKYAIVN 277 (641)
Q Consensus 270 ~~k~~l~~ 277 (641)
|..+.-|+
T Consensus 467 DR~v~gW~ 474 (481)
T KOG0300|consen 467 DRMVAGWK 474 (481)
T ss_pred cceeeeeE
Confidence 76666665
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.7e-22 Score=200.71 Aligned_cols=242 Identities=17% Similarity=0.261 Sum_probs=202.9
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccc----cc------------c--cccccCeEEEEEeCCCC
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLL----EK------------F--DEHEGPVRGICFHNQQP 64 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l----~~------------~--~~h~~~V~~i~fsp~~~ 64 (641)
+.+..|.-+|.|++++|+..+.++++.||+|.=|++.+|+.. .+ . +.|...+.+++.+||++
T Consensus 136 ~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgk 215 (479)
T KOG0299|consen 136 RVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGK 215 (479)
T ss_pred eeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCc
Confidence 456789999999999999999999999999999999877632 11 1 26788899999999999
Q ss_pred EEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCe
Q psy9327 65 IFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQT 144 (641)
Q Consensus 65 ~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~ 144 (641)
+|++|+ .|..|+|||.++.+.+..+.+|.+.|.+++|-..-..+.++|.|++
T Consensus 216 ylatgg----------------------------~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drs 267 (479)
T KOG0299|consen 216 YLATGG----------------------------RDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRS 267 (479)
T ss_pred EEEecC----------------------------CCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCc
Confidence 999998 9999999999999999999999999999999988888999999999
Q ss_pred EEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeee---cccCCCceeee
Q psy9327 145 IRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLS---MKSKHPIWKYC 221 (641)
Q Consensus 145 I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s---~~~~~~v~~~~ 221 (641)
|++|+++....+.++.||.+.|.++.-...++.+-+|+.|+++++|++..-. .-.+.++...+-| ++..|
T Consensus 268 vkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~ees-qlifrg~~~sidcv~~In~~H------ 340 (479)
T KOG0299|consen 268 VKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEES-QLIFRGGEGSIDCVAFINDEH------ 340 (479)
T ss_pred eEEEehhHhHHHHHHhCCccceeeechhcccceEEeccccceeEEEeccccc-eeeeeCCCCCeeeEEEecccc------
Confidence 9999999999999999999999999888788888888899999999995433 2333344333332 22223
Q ss_pred eeeeeeCCCeeEEEec-CCCcceeeec--C---C--------cceEEEEEcCCccEEEEecCCeEEEEEcCCCC
Q psy9327 222 KPVKYCNPKHTLHICN-RKMEPLCNIH--E---N--------TRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG 281 (641)
Q Consensus 222 ~~l~s~~~d~~I~i~d-~~~~~~~~~~--~---~--------~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g 281 (641)
+++|+.+|.|.+|+ .+..++.+.. | . ..|++++..|....+++|+.+|.+.+|..++|
T Consensus 341 --fvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g 412 (479)
T KOG0299|consen 341 --FVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDG 412 (479)
T ss_pred --eeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCC
Confidence 78999999999999 4444444332 1 1 27899999999999999999999999998887
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=7e-23 Score=193.98 Aligned_cols=206 Identities=20% Similarity=0.343 Sum_probs=167.9
Q ss_pred ceeeccCCCCeEEEEEcc-CCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCC-CCEEEEeceeeEEeeec
Q psy9327 2 LTKFETKSARVKGLSFHP-KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ-QPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~-~~~l~sgs~~~~~~~~~ 79 (641)
|+.|+.|...|.++.|++ ++..+++++.||+|++||..-++.+.+|.+|...|...+|||. ...+++++
T Consensus 97 i~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~S--------- 167 (311)
T KOG0277|consen 97 IHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASAS--------- 167 (311)
T ss_pred hhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEcc---------
Confidence 567899999999999998 5567888899999999999999999999999999999999995 56777776
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECCC-CeeEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQS-RNCIC 157 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~~-~~~i~ 157 (641)
.|+..++||++..-....+..|...+.++.|+. +...+++|+.|+.|++||+++ +.++.
T Consensus 168 -------------------gd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~ 228 (311)
T KOG0277|consen 168 -------------------GDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLF 228 (311)
T ss_pred -------------------CCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccce
Confidence 999999999986544444899999999999998 556889999999999999986 45889
Q ss_pred EEccCCCCEEEEEEecC-CCEEEEEeCCCeEEEEecCCCc-eeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEE
Q psy9327 158 VLTGHNHYVMCAQFHPT-DDIVVSASLDQTIRVWDISGLR-KKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHI 235 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~-g~~lvSgs~DgtI~IWD~~~~~-~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i 235 (641)
.+.+|.-.|+.+.|||. ...|+|+|.|-++||||..... .+.+...|...+..+...- + ....+++++-|..+.+
T Consensus 229 eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~--~-~~~~vAs~gWDe~l~V 305 (311)
T KOG0277|consen 229 ELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSL--F-DPGQVASTGWDELLYV 305 (311)
T ss_pred eecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEecccccc--c-cCceeeecccccceee
Confidence 99999999999999996 4789999999999999997543 3444455555655433211 1 1122667777778887
Q ss_pred ecC
Q psy9327 236 CNR 238 (641)
Q Consensus 236 ~d~ 238 (641)
|+.
T Consensus 306 w~p 308 (311)
T KOG0277|consen 306 WNP 308 (311)
T ss_pred ecc
Confidence 763
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.3e-22 Score=194.98 Aligned_cols=275 Identities=15% Similarity=0.251 Sum_probs=200.4
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECcc------------C------cccccccccccCeEEEEEeCCCCE
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRM------------N------TLLEKFDEHEGPVRGICFHNQQPI 65 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~------------~------~~l~~~~~h~~~V~~i~fsp~~~~ 65 (641)
.+..|++++.+-+|+|||.++|+|+.|-.|+|.|++. + -.++++-.|..+|+++.|||....
T Consensus 107 ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~I 186 (430)
T KOG0640|consen 107 YLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETI 186 (430)
T ss_pred EEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhhe
Confidence 3578999999999999999999999999999999861 1 135667789999999999999999
Q ss_pred EEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc--cCCCCeEEEEEccCCCEEEEEeCCC
Q psy9327 66 FVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL--GHLDYIRTTFFHHEYPWILSASDDQ 143 (641)
Q Consensus 66 l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~--~h~~~V~~v~fsp~~~~l~sgs~Dg 143 (641)
|++|+ .|++|+++|+..-.....++ ....+|+++.|||.|.+++.|.+.-
T Consensus 187 LiS~s----------------------------rD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp 238 (430)
T KOG0640|consen 187 LISGS----------------------------RDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHP 238 (430)
T ss_pred EEecc----------------------------CCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCC
Confidence 99998 99999999997543222222 2456899999999999999999999
Q ss_pred eEEEEECCCCeeEEEE---ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc-CCCc-eeeecccCCCce
Q psy9327 144 TIRIWYWQSRNCICVL---TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP-GMGK-LVLSMKSKHPIW 218 (641)
Q Consensus 144 ~I~vWd~~~~~~i~~l---~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~-~~~~-~v~s~~~~~~v~ 218 (641)
++++||+.+-+|...- .+|.+.|+++.+++.+++.++||.||.|++||--+.+|+.++. .|+. .|.|.. +..--
T Consensus 239 ~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~-Ftkn~ 317 (430)
T KOG0640|consen 239 TLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAV-FTKNG 317 (430)
T ss_pred ceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEE-EccCC
Confidence 9999999999886544 4799999999999999999999999999999999999988875 3433 333321 11111
Q ss_pred eeeeeeeeeCCCeeEEEec-CCCcceeeecCC---c---ceEEEEEcCCccEEEEec-CCeEEEEEc------------C
Q psy9327 219 KYCKPVKYCNPKHTLHICN-RKMEPLCNIHEN---T---RVKSGAWDESGVFIYTTS-NHIKYAIVN------------G 278 (641)
Q Consensus 219 ~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~~---~---~I~sla~~p~g~~L~t~s-~~~k~~l~~------------~ 278 (641)
++ +.+.+.|..+++|. ..+..+...... + .-+...|+.+..++..-. ..+.++-|+ +
T Consensus 318 ky---iLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slg 394 (430)
T KOG0640|consen 318 KY---ILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLG 394 (430)
T ss_pred eE---EeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccC
Confidence 11 55666889999998 444444444321 1 112344555555554433 233344444 3
Q ss_pred CCCeEeccccceEEEEEcCcEEEEEeCCCCeEEEEeC
Q psy9327 279 DHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 279 ~~g~I~~~d~p~~~~~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
++|.+|.+.- .+.+.-+.+++.|.+.+.|--.
T Consensus 395 Hn~a~R~i~H-----SP~~p~FmTcsdD~raRFWyrr 426 (430)
T KOG0640|consen 395 HNGAVRWIVH-----SPVEPAFMTCSDDFRARFWYRR 426 (430)
T ss_pred CCCCceEEEe-----CCCCCceeeecccceeeeeeec
Confidence 4444443311 1345667888889999999543
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-21 Score=208.46 Aligned_cols=237 Identities=18% Similarity=0.330 Sum_probs=203.8
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
+.+.+..|-|.++++++|..+|.+.++|+.+...+.+.+.|++.+..++.+||+..+++|+
T Consensus 413 ~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~s------------------- 473 (888)
T KOG0306|consen 413 GYILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGS------------------- 473 (888)
T ss_pred ccEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEec-------------------
Confidence 4788999999999999999999999999999999999999999999999999999999998
Q ss_pred ceeeEEEeeCCCeEEEEECCC-----Cee--EEEEc-----cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQ-----RKC--IFTLL-----GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t-----~~~--~~~~~-----~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~ 157 (641)
.|.+|++||..- |.. ...+. .-.+.|.|+.+||||++++.+--|.+|+||-+.+-+.--
T Consensus 474 ---------aDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFfl 544 (888)
T KOG0306|consen 474 ---------ADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFL 544 (888)
T ss_pred ---------CCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeee
Confidence 999999999741 211 11111 135789999999999999999999999999999999888
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
.+.||.-+|.|+..+||+.+++|||.|.+|+||-++-|.|...+-+|...||++.. -|- ...+.+|+.|+.++-||
T Consensus 545 sLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F-~P~---~~~FFt~gKD~kvKqWD 620 (888)
T KOG0306|consen 545 SLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQF-LPK---THLFFTCGKDGKVKQWD 620 (888)
T ss_pred eecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEE-ccc---ceeEEEecCcceEEeec
Confidence 99999999999999999999999999999999999999999999999988888442 221 11256888999999999
Q ss_pred -CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcC
Q psy9327 238 -RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 238 -~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~ 278 (641)
.+.+.+..+. +...|++++..|+|.+++++|.|..+.+|..
T Consensus 621 g~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~ 663 (888)
T KOG0306|consen 621 GEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWER 663 (888)
T ss_pred hhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeEeeec
Confidence 5666666665 4789999999999999999876666666653
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.1e-20 Score=174.08 Aligned_cols=275 Identities=16% Similarity=0.234 Sum_probs=206.7
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECcc------Cc---------ccccccccccCeEEEEEeCCCCEEEEecee
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRM------NT---------LLEKFDEHEGPVRGICFHNQQPIFVSGGKM 72 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~------~~---------~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~ 72 (641)
.+..|.+++|||.|.+.++|+.+.+.+|--+.. +. ..++-+.|.+.|.|.+|+|+|.++++|+
T Consensus 31 dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgs-- 108 (350)
T KOG0641|consen 31 DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGS-- 108 (350)
T ss_pred chhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecC--
Confidence 457899999999999999999999999886531 11 1122346899999999999999999998
Q ss_pred eEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee-----EEEEccCCCCeEEEEEccC----CCEEEEEe-CC
Q psy9327 73 IVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC-----IFTLLGHLDYIRTTFFHHE----YPWILSAS-DD 142 (641)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~-----~~~~~~h~~~V~~v~fsp~----~~~l~sgs-~D 142 (641)
+|.+|++.-++..++ -..|.-|++.|+.++|-.+ +..+++++ .|
T Consensus 109 --------------------------ndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagd 162 (350)
T KOG0641|consen 109 --------------------------NDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGD 162 (350)
T ss_pred --------------------------CCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCc
Confidence 999999987765433 2456779999999999753 45777765 58
Q ss_pred CeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC--CC-----ceeeecccCC
Q psy9327 143 QTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG--MG-----KLVLSMKSKH 215 (641)
Q Consensus 143 g~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~--~~-----~~v~s~~~~~ 215 (641)
..|++-|...++..+.+.||++-|.++ ++-++-.++|||.|++||+||++-..+..++.. ++ ..|.++ ...
T Consensus 163 c~iy~tdc~~g~~~~a~sghtghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav-~vd 240 (350)
T KOG0641|consen 163 CKIYITDCGRGQGFHALSGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAV-AVD 240 (350)
T ss_pred ceEEEeecCCCCcceeecCCcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEE-EEC
Confidence 899999999999999999999999887 344689999999999999999998888877653 11 111111 111
Q ss_pred CceeeeeeeeeeCCCeeEEEec-CCCcceeeecC-CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEeccccc----
Q psy9327 216 PIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIHE-NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLP---- 289 (641)
Q Consensus 216 ~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~-~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~p---- 289 (641)
|.- -.+++|-.|....+|| +.+..+..+++ ...|.++.|+|...++.+++-|.++.+.+.....-..+..-
T Consensus 241 psg---rll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~e 317 (350)
T KOG0641|consen 241 PSG---RLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAE 317 (350)
T ss_pred CCc---ceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEe
Confidence 110 1167888999999999 44566666664 78999999999999999999999999877544332222111
Q ss_pred -----eE-EEEEcCcEEEEEeCCCCeEEEEeC
Q psy9327 290 -----IY-ITKIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 290 -----~~-~~~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
+. .|+...-.+++.+.|.++..|.++
T Consensus 318 hkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 318 HKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred ccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 11 144555567777888888888765
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-21 Score=185.07 Aligned_cols=248 Identities=13% Similarity=0.165 Sum_probs=190.0
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
|.+|.||++.|.|++.+-+...+++|+.|.++++||+.+|+.+.+++ ...+|+.+.|+++|.+++.+.+.. +
T Consensus 45 lGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~-m------ 116 (327)
T KOG0643|consen 45 LGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQ-M------ 116 (327)
T ss_pred eeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhh-c------
Confidence 67899999999999999999999999999999999999999998884 668999999999999888775100 0
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECC-------CCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYK-------QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN 154 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~-------t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~ 154 (641)
+..+.|.++|++ ...+...+..+.+.++.+-|.|-+..|++|..||.|..||.+++.
T Consensus 117 ----------------g~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~ 180 (327)
T KOG0643|consen 117 ----------------GYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGK 180 (327)
T ss_pred ----------------CcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCc
Confidence 256789999988 456788888899999999999999999999999999999999974
Q ss_pred -eEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCC-Cee
Q psy9327 155 -CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNP-KHT 232 (641)
Q Consensus 155 -~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~-d~~ 232 (641)
.+..-..|...|+.++|+|+..+++++|.|.+-++||.++...++++.. ..+|.+ ++..|+.+.. +..|+. -..
T Consensus 181 ~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~t-e~PvN~-aaisP~~d~V--ilgGGqeA~d 256 (327)
T KOG0643|consen 181 ELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTT-ERPVNT-AAISPLLDHV--ILGGGQEAMD 256 (327)
T ss_pred eeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeee-cccccc-eecccccceE--EecCCceeee
Confidence 5566678999999999999999999999999999999999998887753 233332 2222322211 111111 111
Q ss_pred EEEec-CCC------------cceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 233 LHICN-RKM------------EPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 233 I~i~d-~~~------------~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
|..-+ +.+ +.+..+. |-++|++++|+|+|...++|++||-+.+..
T Consensus 257 VTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~ 315 (327)
T KOG0643|consen 257 VTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHH 315 (327)
T ss_pred eeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEE
Confidence 11111 111 1122222 458999999999999888877666665543
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-22 Score=212.92 Aligned_cols=271 Identities=17% Similarity=0.300 Sum_probs=215.3
Q ss_pred EEEEcc-CCCeEEEEeCCCcEEEEECccCc------ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeeccc
Q psy9327 14 GLSFHP-KRPWILSSLHNGVIQLWDYRMNT------LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRN 86 (641)
Q Consensus 14 ~l~fsp-dg~~Lasg~~dg~I~iWD~~~~~------~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~ 86 (641)
.+..++ .+++|++||.||.|++|+...-. .+.+++.|+..|+.++...+++.|++++
T Consensus 29 ~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~S---------------- 92 (735)
T KOG0308|consen 29 ALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISAS---------------- 92 (735)
T ss_pred hccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEec----------------
Confidence 455554 56689999999999999985421 3678899999999999999999999998
Q ss_pred CCcceeeEEEeeCCCeEEEEECCCC--eeEEEEccCCCCeEEEEE-ccCCCEEEEEeCCCeEEEEECCCCe--eEE----
Q psy9327 87 EPCLFRIKSVLGDDYKIKVWNYKQR--KCIFTLLGHLDYIRTTFF-HHEYPWILSASDDQTIRIWYWQSRN--CIC---- 157 (641)
Q Consensus 87 ~~~~~~~~~~~s~Dg~I~vWD~~t~--~~~~~~~~h~~~V~~v~f-sp~~~~l~sgs~Dg~I~vWd~~~~~--~i~---- 157 (641)
.|.+|++|+...+ -+..++..|.++|.|++. -++...+||||-|+.|.+||+.++. .+.
T Consensus 93 ------------sDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~ 160 (735)
T KOG0308|consen 93 ------------SDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNN 160 (735)
T ss_pred ------------CCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccc
Confidence 9999999999877 577888999999999999 7788899999999999999999773 222
Q ss_pred ----EEc-cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCee
Q psy9327 158 ----VLT-GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHT 232 (641)
Q Consensus 158 ----~l~-~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~ 232 (641)
.+. ||...|.+++.++.|..+++|+..+.+++||.++.+.+..+.||...|..+.... -...+.++++|++
T Consensus 161 ~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~d----DGt~~ls~sSDgt 236 (735)
T KOG0308|consen 161 VTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVND----DGTRLLSASSDGT 236 (735)
T ss_pred cccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcC----CCCeEeecCCCce
Confidence 233 8999999999999999999999999999999999999999999876665432111 1122678899999
Q ss_pred EEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCC----eEeccccceEEE--EEcCcEEEEEe
Q psy9327 233 LHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG----IIRTLDLPIYIT--KIKGNQVYYLD 304 (641)
Q Consensus 233 I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g----~I~~~d~p~~~~--~~~g~~v~~~~ 304 (641)
|++|| ....++.++. +...|+++..+|+=..+|+|+.++.++..+..+- .|..-+.|+.-. +.+.+.++..+
T Consensus 237 IrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~~~~WvtT 316 (735)
T KOG0308|consen 237 IRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLHEHDNSVWVTT 316 (735)
T ss_pred EEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCchhheEeecCCCchhhhhhccccCCceeee
Confidence 99999 4444555443 4556999999999999999999999987665442 133335554432 23466779999
Q ss_pred CCCCeEEEEeCC
Q psy9327 305 RECSPHVLRIDP 316 (641)
Q Consensus 305 ~dg~i~v~~~~~ 316 (641)
.|+.|+-|...+
T Consensus 317 tds~I~rW~~~~ 328 (735)
T KOG0308|consen 317 TDSSIKRWKLEP 328 (735)
T ss_pred ccccceecCCcc
Confidence 999999996654
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-22 Score=217.87 Aligned_cols=233 Identities=25% Similarity=0.451 Sum_probs=181.5
Q ss_pred eEEEEEcc-CCCeEEEEeCCCcEEEEECcc---CcccccccccccCeEEEEEeCCCC-EEEEeceeeEEeeeceeeeccc
Q psy9327 12 VKGLSFHP-KRPWILSSLHNGVIQLWDYRM---NTLLEKFDEHEGPVRGICFHNQQP-IFVSGGKMIVMAYQGCILESRN 86 (641)
Q Consensus 12 V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~---~~~l~~~~~h~~~V~~i~fsp~~~-~l~sgs~~~~~~~~~~~~~~~~ 86 (641)
+..+.|+. +.++||+++.+|.|.+||+.. .+++..|..|+..|+++.||+..+ +|++|+
T Consensus 90 ~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGS---------------- 153 (839)
T KOG0269|consen 90 AADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGS---------------- 153 (839)
T ss_pred hhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecC----------------
Confidence 44566764 567999999999999999977 677888999999999999999766 556665
Q ss_pred CCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECCC-CeeEEEEccCCC
Q psy9327 87 EPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQS-RNCICVLTGHNH 164 (641)
Q Consensus 87 ~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~~-~~~i~~l~~h~~ 164 (641)
.||+|++||++..+...++.+....|++|.|+| .+..|+++.+.|.+.+||++. .+|...+.+|.+
T Consensus 154 ------------QDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~G 221 (839)
T KOG0269|consen 154 ------------QDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNG 221 (839)
T ss_pred ------------CCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccC
Confidence 999999999999999999999999999999999 567899999999999999985 457888999999
Q ss_pred CEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC-CceeeecccCCCceeeeeeeeeeC--CCeeEEEec--CC
Q psy9327 165 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM-GKLVLSMKSKHPIWKYCKPVKYCN--PKHTLHICN--RK 239 (641)
Q Consensus 165 ~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~-~~~v~s~~~~~~v~~~~~~l~s~~--~d~~I~i~d--~~ 239 (641)
+|.|+.|||++.+|+||+.|++|+|||+.+.+......-+ ..++-.+ .+.|-... -+++++ .|..|++|| +.
T Consensus 222 pV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rV-kWRP~~~~--hLAtcsmv~dtsV~VWDvrRP 298 (839)
T KOG0269|consen 222 PVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRV-KWRPARSY--HLATCSMVVDTSVHVWDVRRP 298 (839)
T ss_pred ceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEeecceeeee-eeccCccc--hhhhhhccccceEEEEeeccc
Confidence 9999999999999999999999999999865433222110 1111111 11111111 144444 688999999 55
Q ss_pred CcceeeecC-CcceEEEEEcC-CccEEEEecCCeEEEE
Q psy9327 240 MEPLCNIHE-NTRVKSGAWDE-SGVFIYTTSNHIKYAI 275 (641)
Q Consensus 240 ~~~~~~~~~-~~~I~sla~~p-~g~~L~t~s~~~k~~l 275 (641)
..+...+.+ ...++.++|.. |...+++++.|+.++.
T Consensus 299 YIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~q 336 (839)
T KOG0269|consen 299 YIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQ 336 (839)
T ss_pred cccceeeeccCccccceeccCCCceeeEeecCccHHHH
Confidence 566666665 56677889975 4678889888777664
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.7e-21 Score=186.48 Aligned_cols=228 Identities=16% Similarity=0.318 Sum_probs=167.8
Q ss_pred CCCCeEEEEEcc-CCCeEEEEeCCCcEEEEECcc-Cccc-ccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 8 KSARVKGLSFHP-KRPWILSSLHNGVIQLWDYRM-NTLL-EKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 8 H~~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~-~~~l-~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
-++.|.+|+||| ...++++|+.||+||+|+++. |..+ +....|.+||.+++|+.+|..+++|+
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~-------------- 91 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGG-------------- 91 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeec--------------
Confidence 357899999999 566777999999999999976 4443 33457999999999999999999998
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC--EEEEEeCCCeEEEEECCCCeeEEEEc--
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP--WILSASDDQTIRIWYWQSRNCICVLT-- 160 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~--~l~sgs~Dg~I~vWd~~~~~~i~~l~-- 160 (641)
.|+.+++||+.+++ ...+..|.++|+++.|-+... .|++||.|.+++.||.++..++.++.
T Consensus 92 --------------~Dk~~k~wDL~S~Q-~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LP 156 (347)
T KOG0647|consen 92 --------------CDKQAKLWDLASGQ-VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLP 156 (347)
T ss_pred --------------cCCceEEEEccCCC-eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeecc
Confidence 99999999999996 566777999999999998665 89999999999999999876554432
Q ss_pred -----------------------------------cC----CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCcee--e
Q psy9327 161 -----------------------------------GH----NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK--N 199 (641)
Q Consensus 161 -----------------------------------~h----~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~--~ 199 (641)
.+ .-.++|++..++....+.||-+|.+.|..+..+... .
T Consensus 157 eRvYa~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nF 236 (347)
T KOG0647|consen 157 ERVYAADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNF 236 (347)
T ss_pred ceeeehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCce
Confidence 11 223566666666666677777777777766554211 1
Q ss_pred eccCC------Cceeeec--ccCCCceeeeeeeeeeCCCeeEEEecCC-Ccceee-ecCCcceEEEEEcCCccEEEEe
Q psy9327 200 VAPGM------GKLVLSM--KSKHPIWKYCKPVKYCNPKHTLHICNRK-MEPLCN-IHENTRVKSGAWDESGVFIYTT 267 (641)
Q Consensus 200 ~~~~~------~~~v~s~--~~~~~v~~~~~~l~s~~~d~~I~i~d~~-~~~~~~-~~~~~~I~sla~~p~g~~L~t~ 267 (641)
++.-| ...|+++ ..+||+.. .++++++||+..+||+. ...+.. -.+..+|++++|+.+|.+++-+
T Consensus 237 tFkCHR~~~~~~~~VYaVNsi~FhP~hg---tlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaYA 311 (347)
T KOG0647|consen 237 TFKCHRSTNSVNDDVYAVNSIAFHPVHG---TLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAYA 311 (347)
T ss_pred eEEEeccCCCCCCceEEecceEeecccc---eEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCCCEEEEE
Confidence 11111 1112221 23455433 28899999999999954 334444 3458899999999999877654
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-21 Score=205.74 Aligned_cols=235 Identities=19% Similarity=0.239 Sum_probs=201.9
Q ss_pred eeeccCCCCeEE-EEEcc-CCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 3 TKFETKSARVKG-LSFHP-KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 3 ~~~~~H~~~V~~-l~fsp-dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
+.|++|.+-|.+ +++-+ ++-++++|+.|++|.+|......++..+.+|...|.|++...++. +++|+
T Consensus 51 ~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgS---------- 119 (745)
T KOG0301|consen 51 HAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGS---------- 119 (745)
T ss_pred eecccCcceeeccceeccccCcceEeecccceEEEEecCCCCchhhhhccccceeeeecCCcCc-eEecc----------
Confidence 357888888888 88886 444699999999999999999999999999999999999887777 88987
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~ 160 (641)
.|.++++|-. +++...+.+|+..|.++++-|++ .++|||.|.+|++|.- ++++.+|.
T Consensus 120 ------------------WD~TakvW~~--~~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~--~~~l~tf~ 176 (745)
T KOG0301|consen 120 ------------------WDSTAKVWRI--GELVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKG--GTLLKTFS 176 (745)
T ss_pred ------------------cccceEEecc--hhhhcccCCcchheeeeeecCCC-cEEeccCcceeeeccC--Cchhhhhc
Confidence 9999999965 66777799999999999999998 7999999999999974 78899999
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCC
Q psy9327 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKM 240 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~ 240 (641)
||++.|+.+++-|++ .++|++.||.|+.||+ ++.++....+|..+++|+...++- .-++++++|++++||+..
T Consensus 177 gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~----~~Ivs~gEDrtlriW~~~- 249 (745)
T KOG0301|consen 177 GHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSD----GLIVSTGEDRTLRIWKKD- 249 (745)
T ss_pred cchhheeeeEEecCC-CeEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCC----CeEEEecCCceEEEeecC-
Confidence 999999999999765 5789999999999999 778888888999999987744432 227789999999999977
Q ss_pred cceeeecC-CcceEEEEEcCCccEEEEecCCeEEEEEcCC
Q psy9327 241 EPLCNIHE-NTRVKSGAWDESGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 241 ~~~~~~~~-~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~ 279 (641)
++...+.. +..|+++..-++|. +++|++||.+++|..+
T Consensus 250 e~~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 250 ECVQVITLPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVD 288 (745)
T ss_pred ceEEEEecCccceEEEEEeeCCC-EEEeccCceEEEEEec
Confidence 55555554 56899998888876 7888999999998755
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-20 Score=181.92 Aligned_cols=256 Identities=17% Similarity=0.262 Sum_probs=189.3
Q ss_pred ccCCCCeEEEEEcc-CCCeEEEEeCCCcEEEEECccCcc------c----c-----cccccccCeEEEEEeCC-CCEEEE
Q psy9327 6 ETKSARVKGLSFHP-KRPWILSSLHNGVIQLWDYRMNTL------L----E-----KFDEHEGPVRGICFHNQ-QPIFVS 68 (641)
Q Consensus 6 ~~H~~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~~~~------l----~-----~~~~h~~~V~~i~fsp~-~~~l~s 68 (641)
.-|.+.|+++...+ .|+++++|+.||.|.+||++.... + . .-.+|.-.|..+.|-|- .-.|.+
T Consensus 40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts 119 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS 119 (397)
T ss_pred ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence 35889999999998 789999999999999999975431 1 1 11357778999999884 445555
Q ss_pred eceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc---CCCEEEEEeCCCeE
Q psy9327 69 GGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH---EYPWILSASDDQTI 145 (641)
Q Consensus 69 gs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp---~~~~l~sgs~Dg~I 145 (641)
++ .|.+++|||.++-+....|+ -.+.|..-+++| ...++++|.+|-.|
T Consensus 120 sS----------------------------FDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~V 170 (397)
T KOG4283|consen 120 SS----------------------------FDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQV 170 (397)
T ss_pred cc----------------------------ccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcE
Confidence 55 99999999999998888887 667888888888 34588999999999
Q ss_pred EEEECCCCeeEEEEccCCCCEEEEEEecCCCE-EEEEeCCCeEEEEecCCC-ceeeeccCCCceeeecccCCCceeeeee
Q psy9327 146 RIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGL-RKKNVAPGMGKLVLSMKSKHPIWKYCKP 223 (641)
Q Consensus 146 ~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~-lvSgs~DgtI~IWD~~~~-~~~~~~~~~~~~v~s~~~~~~v~~~~~~ 223 (641)
++.|+.+|.+-+++.||.+.|.++.|+|...+ |++||.||.||+||++.- .+..++..|+.
T Consensus 171 rLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~----------------- 233 (397)
T KOG4283|consen 171 RLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNT----------------- 233 (397)
T ss_pred EEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccC-----------------
Confidence 99999999999999999999999999998765 678999999999999863 33333332210
Q ss_pred eeeeCCCeeEEEecCCCcce-eeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe--Eeccc---------cceE
Q psy9327 224 VKYCNPKHTLHICNRKMEPL-CNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI--IRTLD---------LPIY 291 (641)
Q Consensus 224 l~s~~~d~~I~i~d~~~~~~-~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~--I~~~d---------~p~~ 291 (641)
++...+ ....+.+.+..++|..+|.++++.+.+.++.+|+.+.|. ++..- ..+.
T Consensus 234 --------------k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~ 299 (397)
T KOG4283|consen 234 --------------KRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVH 299 (397)
T ss_pred --------------ccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCcccccccccccccccccceEE
Confidence 011111 234467889999999999999999999999999988774 22110 0011
Q ss_pred EEEEcCcEEEEEeCCCCeEEEEeCCcchhh
Q psy9327 292 ITKIKGNQVYYLDRECSPHVLRIDPTEFKF 321 (641)
Q Consensus 292 ~~~~~g~~v~~~~~dg~i~v~~~~~~~~~~ 321 (641)
+...+...++-...++.+.+.+.-+++++-
T Consensus 300 ~~~~~s~vfv~~p~~~~lall~~~sgs~ir 329 (397)
T KOG4283|consen 300 IQSMDSDVFVLFPNDGSLALLNLLEGSFVR 329 (397)
T ss_pred EeecccceEEEEecCCeEEEEEccCceEEE
Confidence 111223334444455666666666555543
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=184.01 Aligned_cols=246 Identities=16% Similarity=0.257 Sum_probs=197.1
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC---cccccccccccCeEEEEEe-C-CCCEEEEeceeeEEeee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN---TLLEKFDEHEGPVRGICFH-N-QQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~---~~l~~~~~h~~~V~~i~fs-p-~~~~l~sgs~~~~~~~~ 78 (641)
.-..|++-|......--|.+||+++.|++|+|+..+.. +++..+.+|++||..++|. | .|.+|++++
T Consensus 6 idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScs-------- 77 (299)
T KOG1332|consen 6 IDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCS-------- 77 (299)
T ss_pred hhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEee--------
Confidence 34689999999888888999999999999999999764 4678889999999999995 4 688999997
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCee--EEEEccCCCCeEEEEEccC--CCEEEEEeCCCeEEEEECCCC-
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFHHE--YPWILSASDDQTIRIWYWQSR- 153 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~--~~~~~~h~~~V~~v~fsp~--~~~l~sgs~Dg~I~vWd~~~~- 153 (641)
.||+|.||...+|+. ...+..|...|++++|-|. |..|++|+.||+|.|.++++.
T Consensus 78 --------------------YDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g 137 (299)
T KOG1332|consen 78 --------------------YDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSG 137 (299)
T ss_pred --------------------cCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCC
Confidence 999999999988853 4556789999999999885 568999999999999998765
Q ss_pred e--eEEEEccCCCCEEEEEEecC---C-----------CEEEEEeCCCeEEEEecCCC--ceeeeccCCCceeeecccCC
Q psy9327 154 N--CICVLTGHNHYVMCAQFHPT---D-----------DIVVSASLDQTIRVWDISGL--RKKNVAPGMGKLVLSMKSKH 215 (641)
Q Consensus 154 ~--~i~~l~~h~~~V~sl~fsp~---g-----------~~lvSgs~DgtI~IWD~~~~--~~~~~~~~~~~~v~s~~~~~ 215 (641)
. .......|.-.|++++|.|- | ..|+||+-|..|+||+..+. ...+++.+|...|...+...
T Consensus 138 ~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP 217 (299)
T KOG1332|consen 138 GWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAP 217 (299)
T ss_pred CccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhcc
Confidence 1 22345689999999999995 4 46999999999999999875 33455778877776644333
Q ss_pred CceeeeeeeeeeCCCeeEEEecCCC--ccee-e-ecC-CcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 216 PIWKYCKPVKYCNPKHTLHICNRKM--EPLC-N-IHE-NTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 216 ~v~~~~~~l~s~~~d~~I~i~d~~~--~~~~-~-~~~-~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
.+-.....+++|+.|+++.||..+. +++. + +++ ...+..+.|+..|..|+.++.+.++.+|.
T Consensus 218 ~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwk 284 (299)
T KOG1332|consen 218 SVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWK 284 (299)
T ss_pred ccCCCceeeEEecCCCcEEEEEecCccCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEE
Confidence 3323334489999999999999442 2221 1 222 56799999999999999999999999886
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-20 Score=183.43 Aligned_cols=156 Identities=22% Similarity=0.393 Sum_probs=134.7
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
++.|+++.|+|.++.|++++.||++++||+....+..+| .|.+|+.+.+|.++ ..+++|+
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~-~~~~plL~c~F~d~-~~~~~G~------------------ 72 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKF-KHGAPLLDCAFADE-STIVTGG------------------ 72 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhe-ecCCceeeeeccCC-ceEEEec------------------
Confidence 678999999999999999999999999999888766666 59999999999984 5677777
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEE
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMC 168 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~s 168 (641)
-||.|+.+|++++.. ..+..|.++|+|+.+.+....+++||+|++|++||.+...+..++.. ...|.|
T Consensus 73 ----------~dg~vr~~Dln~~~~-~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~-~kkVy~ 140 (323)
T KOG1036|consen 73 ----------LDGQVRRYDLNTGNE-DQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQ-GKKVYC 140 (323)
T ss_pred ----------cCceEEEEEecCCcc-eeeccCCCceEEEEeeccCCeEEEcccCccEEEEecccccccccccc-CceEEE
Confidence 899999999998875 44566999999999999888999999999999999998777767663 347887
Q ss_pred EEEecCCCEEEEEeCCCeEEEEecCCCcee
Q psy9327 169 AQFHPTDDIVVSASLDQTIRVWDISGLRKK 198 (641)
Q Consensus 169 l~fsp~g~~lvSgs~DgtI~IWD~~~~~~~ 198 (641)
+.. .|+.|+.|+.|..|.+||+++....
T Consensus 141 ~~v--~g~~LvVg~~~r~v~iyDLRn~~~~ 168 (323)
T KOG1036|consen 141 MDV--SGNRLVVGTSDRKVLIYDLRNLDEP 168 (323)
T ss_pred Eec--cCCEEEEeecCceEEEEEcccccch
Confidence 766 4899999999999999999986543
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.3e-21 Score=209.53 Aligned_cols=239 Identities=21% Similarity=0.352 Sum_probs=176.5
Q ss_pred ccccc-ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC------------
Q psy9327 44 LEKFD-EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ------------ 110 (641)
Q Consensus 44 l~~~~-~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t------------ 110 (641)
...+. .|.+.|.++.||+||++||+|| .|+.|+||.+..
T Consensus 259 ~Qe~~~ah~gaIw~mKFS~DGKyLAsaG----------------------------eD~virVWkVie~e~~~~~~~~~~ 310 (712)
T KOG0283|consen 259 VQEISNAHKGAIWAMKFSHDGKYLASAG----------------------------EDGVIRVWKVIESERMRVAEGDSS 310 (712)
T ss_pred eeccccccCCcEEEEEeCCCCceeeecC----------------------------CCceEEEEEEeccchhcccccccc
Confidence 34455 7999999999999999999999 788888886533
Q ss_pred ------------------------------------------------CeeEEEEccCCCCeEEEEEccCCCEEEEEeCC
Q psy9327 111 ------------------------------------------------RKCIFTLLGHLDYIRTTFFHHEYPWILSASDD 142 (641)
Q Consensus 111 ------------------------------------------------~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D 142 (641)
.++++.|.||.+.|.++.|+.++ +|+|+|.|
T Consensus 311 ~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMD 389 (712)
T KOG0283|consen 311 CMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMD 389 (712)
T ss_pred hhhhhhhhccccCccccccccccccccccccccCCccccCCCccccccccchhhhhccchhheecccccCC-eeEecccc
Confidence 12445677999999999999765 79999999
Q ss_pred CeEEEEECCCCeeEEEEccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeee
Q psy9327 143 QTIRIWYWQSRNCICVLTGHNHYVMCAQFHP-TDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYC 221 (641)
Q Consensus 143 g~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp-~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~ 221 (641)
.||++|++....|+.+|. |.++|+|++|+| |.++++|||.||.||||++...+...-.. ....|.++. ..|--
T Consensus 390 KTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~D-l~~lITAvc-y~PdG--- 463 (712)
T KOG0283|consen 390 KTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWND-LRDLITAVC-YSPDG--- 463 (712)
T ss_pred ccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehh-hhhhheeEE-eccCC---
Confidence 999999999999999997 999999999999 67899999999999999998755432221 222222211 11110
Q ss_pred eeeeeeCCCeeEEEecCCCccee-eec---------CCcceEEEEEcCCcc-EEEEecCCeEEEEEcCCCCeE-eccc--
Q psy9327 222 KPVKYCNPKHTLHICNRKMEPLC-NIH---------ENTRVKSGAWDESGV-FIYTTSNHIKYAIVNGDHGII-RTLD-- 287 (641)
Q Consensus 222 ~~l~s~~~d~~I~i~d~~~~~~~-~~~---------~~~~I~sla~~p~g~-~L~t~s~~~k~~l~~~~~g~I-~~~d-- 287 (641)
.....|..+|.+++|+..+..+. ..+ .+.+|+.+.|.|... .+..+++|.++.|+++.+..+ .-+.
T Consensus 464 k~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~ 543 (712)
T KOG0283|consen 464 KGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGF 543 (712)
T ss_pred ceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhccc
Confidence 11345667888999984433322 111 134799999997533 578889999999999855432 2221
Q ss_pred ----c-ceEEEEEcCcEEEEEeCCCCeEEEEeCCc
Q psy9327 288 ----L-PIYITKIKGNQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 288 ----~-p~~~~~~~g~~v~~~~~dg~i~v~~~~~~ 317 (641)
. ....+..+|..|++++.|..+++|+.+..
T Consensus 544 ~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~~ 578 (712)
T KOG0283|consen 544 RNTSSQISASFSSDGKHIVSASEDSWVYIWKNDSF 578 (712)
T ss_pred ccCCcceeeeEccCCCEEEEeecCceEEEEeCCCC
Confidence 1 12224458999999999999999998753
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-21 Score=196.09 Aligned_cols=242 Identities=16% Similarity=0.225 Sum_probs=196.1
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+.++.|..+.|+++.|.+++..+++++.|+.+++|++...+...++.+|.+.|+++.|......+++|+
T Consensus 212 ~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs----------- 280 (459)
T KOG0288|consen 212 ISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGS----------- 280 (459)
T ss_pred hhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhccccceeecc-----------
Confidence 456778888999999999999999999999999999999999999999999999999988777788887
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~ 161 (641)
.|.+|+.||+....|..+.. ....+.++..+ ...++||-.|++|++||.++..+......
T Consensus 281 -----------------~DRtiK~WDl~k~~C~kt~l-~~S~cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~ 340 (459)
T KOG0288|consen 281 -----------------ADRTIKLWDLQKAYCSKTVL-PGSQCNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRSVPL 340 (459)
T ss_pred -----------------ccchhhhhhhhhhheecccc-ccccccceEec--ceeeeecccccceEEEeccCCceeeEeec
Confidence 99999999999988887765 33455556655 45689999999999999999999999887
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeee-eeeeCCCeeEEEecCCC
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKP-VKYCNPKHTLHICNRKM 240 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~-l~s~~~d~~I~i~d~~~ 240 (641)
+. .|+++..++++..+++++.|.++.+.|+++.....++...+-...+ .....+|+.... +++|+.++.|.||+...
T Consensus 341 gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~as-DwtrvvfSpd~~YvaAGS~dgsv~iW~v~t 418 (459)
T KOG0288|consen 341 GG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCAS-DWTRVVFSPDGSYVAAGSADGSVYIWSVFT 418 (459)
T ss_pred Cc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeecccccccc-ccceeEECCCCceeeeccCCCcEEEEEccC
Confidence 65 9999999999999999999999999999999888877643211111 111112222111 78999999999999443
Q ss_pred cce-eeecC---CcceEEEEEcCCccEEEEecCCeEEEEE
Q psy9327 241 EPL-CNIHE---NTRVKSGAWDESGVFIYTTSNHIKYAIV 276 (641)
Q Consensus 241 ~~~-~~~~~---~~~I~sla~~p~g~~L~t~s~~~k~~l~ 276 (641)
..+ ..... ...|++++|+|.|..+++++.+..+.+|
T Consensus 419 gKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 419 GKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred ceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence 333 22222 3369999999999999999988888877
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-20 Score=201.01 Aligned_cols=270 Identities=14% Similarity=0.149 Sum_probs=214.4
Q ss_pred EEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeE
Q psy9327 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIK 94 (641)
Q Consensus 15 l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~ 94 (641)
++|+ ..+.||+|.. ..|.+|+..++.....++.+...|+++.|+++|.+|++|.
T Consensus 183 ldWs-s~n~laValg-~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~------------------------ 236 (484)
T KOG0305|consen 183 LDWS-SANVLAVALG-QSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGT------------------------ 236 (484)
T ss_pred hhcc-cCCeEEEEec-ceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEee------------------------
Confidence 5677 4556777764 4699999998875555555589999999999999999998
Q ss_pred EEeeCCCeEEEEECCCCeeEEEEcc-CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE-EccCCCCEEEEEEe
Q psy9327 95 SVLGDDYKIKVWNYKQRKCIFTLLG-HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV-LTGHNHYVMCAQFH 172 (641)
Q Consensus 95 ~~~s~Dg~I~vWD~~t~~~~~~~~~-h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~-l~~h~~~V~sl~fs 172 (641)
.+|.|.|||..+.+.+..+.+ |...|.+++|. +..+.+|+.|+.|..+|++..+.... +.+|...|..+.|+
T Consensus 237 ----~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws 310 (484)
T KOG0305|consen 237 ----SDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWS 310 (484)
T ss_pred ----cCCeEEEEehhhccccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEEC
Confidence 999999999999999999999 99999999998 56799999999999999998876555 88999999999999
Q ss_pred cCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeecCCcc
Q psy9327 173 PTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIHENTR 251 (641)
Q Consensus 173 p~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~~~~ 251 (641)
+++..++||+.|+.+.|||......+..+..|...|..++ ..|-..-......|..|++|++|| ..+..+..+..+..
T Consensus 311 ~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~a-wcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQ 389 (484)
T KOG0305|consen 311 PDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALA-WCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQ 389 (484)
T ss_pred CCCCeeccCCCccceEeccCCCccccEEEeccceeeeEee-eCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCCc
Confidence 9999999999999999999988888888888876666533 333333222344566899999999 77888888889999
Q ss_pred eEEEEEcCCccEEEEec--CCeEEEEEcCCCCe-Eecc---ccc--eEEEEEcCcEEEEEeCCCCeEEEEeCCc
Q psy9327 252 VKSGAWDESGVFIYTTS--NHIKYAIVNGDHGI-IRTL---DLP--IYITKIKGNQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 252 I~sla~~p~g~~L~t~s--~~~k~~l~~~~~g~-I~~~---d~p--~~~~~~~g~~v~~~~~dg~i~v~~~~~~ 317 (641)
|.++.|++...-++++. .+..+.||.-..-. +..+ ... -..+..+|..+++++.|.++++|++-+.
T Consensus 390 VcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 390 VCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred eeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence 99999999976666554 44455666542211 1110 000 1124577999999999999999998874
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.1e-20 Score=202.66 Aligned_cols=242 Identities=17% Similarity=0.259 Sum_probs=200.1
Q ss_pred ccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC-cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~-~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
..|...-+.++|.|+|+++++++.||.|++|+.... +.-..+..+...|.+++... .+|++|+
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s--~~f~~~s-------------- 73 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYS--NHFLTGS-------------- 73 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecc--cceEEee--------------
Confidence 478999999999999999999999999999997655 44555555888888887644 4888887
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCC
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNH 164 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~ 164 (641)
.+++|.+|.+.+++.-..+...+-++++++|+.+|.+++.||+|..|++-+..+......+++|.+
T Consensus 74 --------------~~~tv~~y~fps~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~a 139 (933)
T KOG1274|consen 74 --------------EQNTVLRYKFPSGEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDA 139 (933)
T ss_pred --------------ccceEEEeeCCCCCccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCC
Confidence 999999999998877666666778999999999999999999999999999999999999999999
Q ss_pred CEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCC-------ceeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 165 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG-------KLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 165 ~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~-------~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
+|.++.|+|++.+|++.+-||.|++||++++....++++.. ..+.+...+||-- +.++....++.|++++
T Consensus 140 pVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~---g~la~~~~d~~Vkvy~ 216 (933)
T KOG1274|consen 140 PVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKG---GTLAVPPVDNTVKVYS 216 (933)
T ss_pred ceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCC---CeEEeeccCCeEEEEc
Confidence 99999999999999999999999999999999888887632 2222223333321 2255666899999999
Q ss_pred CC-CcceeeecC---CcceEEEEEcCCccEEEEecCCeEEEEEcCCC
Q psy9327 238 RK-MEPLCNIHE---NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 238 ~~-~~~~~~~~~---~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~ 280 (641)
+. ......+.. ...+..++|+|.|.|||+++-++.+.+|+.+.
T Consensus 217 r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 217 RKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDT 263 (933)
T ss_pred cCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEeccc
Confidence 54 344333332 44489999999999999999999999999874
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-19 Score=169.30 Aligned_cols=241 Identities=17% Similarity=0.280 Sum_probs=197.1
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc-----cccccccccCeEEEEEeC----CCCEEEEeceeeEE
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL-----LEKFDEHEGPVRGICFHN----QQPIFVSGGKMIVM 75 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~-----l~~~~~h~~~V~~i~fsp----~~~~l~sgs~~~~~ 75 (641)
-+.|.+.|.|.+|+|+|+++++|+.|.+|++.-+...+. -..|.-|++.|+.++|-. .+..+++++
T Consensus 85 ~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~g----- 159 (350)
T KOG0641|consen 85 NKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAG----- 159 (350)
T ss_pred ccccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecC-----
Confidence 357899999999999999999999999999987653321 234667999999999964 356788887
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
..|..|.+-|..+|+..+.+.+|++-|.++ ++-++-+|++|+.|.+|++||++-..|
T Consensus 160 ----------------------agdc~iy~tdc~~g~~~~a~sghtghilal-yswn~~m~~sgsqdktirfwdlrv~~~ 216 (350)
T KOG0641|consen 160 ----------------------AGDCKIYITDCGRGQGFHALSGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSC 216 (350)
T ss_pred ----------------------CCcceEEEeecCCCCcceeecCCcccEEEE-EEecCcEEEccCCCceEEEEeeeccce
Confidence 489999999999999999999999999776 455688999999999999999999999
Q ss_pred EEEEcc--C-----CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeC
Q psy9327 156 ICVLTG--H-----NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCN 228 (641)
Q Consensus 156 i~~l~~--h-----~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~ 228 (641)
+.++.. | ...|.+++..|.|+++++|-.|....+||++.++.++.+..|...+.|+....... -+.+|+
T Consensus 217 v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~----yllt~s 292 (350)
T KOG0641|consen 217 VNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAH----YLLTCS 292 (350)
T ss_pred eeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCce----EEEEec
Confidence 888742 2 35689999999999999999999999999999999999988888777754332221 167899
Q ss_pred CCeeEEEecCCCcc------eeeecCCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 229 PKHTLHICNRKMEP------LCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 229 ~d~~I~i~d~~~~~------~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
.|..|++-|..+.. +..-.+...+..+.|+|..-.+++.+.|...-+|.
T Consensus 293 yd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa 347 (350)
T KOG0641|consen 293 YDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWA 347 (350)
T ss_pred ccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEec
Confidence 99999999955432 22223467788899999988888888888777775
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-20 Score=192.26 Aligned_cols=242 Identities=21% Similarity=0.358 Sum_probs=183.6
Q ss_pred cCCCCeEEEEEccCCC-eEEEEeCCCcEEEEECccCcc----------cccccccccCeEEEEEeCCCC-EEEEeceeeE
Q psy9327 7 TKSARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNTL----------LEKFDEHEGPVRGICFHNQQP-IFVSGGKMIV 74 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~~----------l~~~~~h~~~V~~i~fsp~~~-~l~sgs~~~~ 74 (641)
.|.+.|+.+.+.|+.+ .+|+++..+.|.|||+.+-.- -.++.+|...=.+++|++... .+++++
T Consensus 122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~---- 197 (422)
T KOG0264|consen 122 NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGS---- 197 (422)
T ss_pred cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeecc----
Confidence 4889999999999765 666778899999999864221 125668888778899998655 566666
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC-------eeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEE
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR-------KCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIR 146 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~-------~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~ 146 (641)
.|++|++||+... .+...+.+|.+.|..++||+ +..+|+++++|+.+.
T Consensus 198 ------------------------~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~ 253 (422)
T KOG0264|consen 198 ------------------------DDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLM 253 (422)
T ss_pred ------------------------CCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEE
Confidence 9999999998643 34567899999999999999 566899999999999
Q ss_pred EEECC--CCeeEEEEccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEecCCCce-eeeccCCCceeeecccCCCceeeee
Q psy9327 147 IWYWQ--SRNCICVLTGHNHYVMCAQFHP-TDDIVVSASLDQTIRVWDISGLRK-KNVAPGMGKLVLSMKSKHPIWKYCK 222 (641)
Q Consensus 147 vWd~~--~~~~i~~l~~h~~~V~sl~fsp-~g~~lvSgs~DgtI~IWD~~~~~~-~~~~~~~~~~v~s~~~~~~v~~~~~ 222 (641)
|||.+ +.++.....+|.+.|.|++|+| ++..|+|||.|++|++||+|+.+. ..++.+|...|.++.. .|-...+
T Consensus 254 iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~W-SPh~etv- 331 (422)
T KOG0264|consen 254 IWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEW-SPHNETV- 331 (422)
T ss_pred EEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEe-CCCCCce-
Confidence 99999 5667778889999999999999 567899999999999999998754 5677788777776432 2222211
Q ss_pred eeeeeCCCeeEEEecCC--Ccc------------eeeec--CCcceEEEEEcCCccEEE-EecCCeEEEEEcCC
Q psy9327 223 PVKYCNPKHTLHICNRK--MEP------------LCNIH--ENTRVKSGAWDESGVFIY-TTSNHIKYAIVNGD 279 (641)
Q Consensus 223 ~l~s~~~d~~I~i~d~~--~~~------------~~~~~--~~~~I~sla~~p~g~~L~-t~s~~~k~~l~~~~ 279 (641)
+++.+.|+.+.+||.. ++. +..+| +...|....|+|+..+++ +.++|+.+.||...
T Consensus 332 -LASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 332 -LASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred -eEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 6778899999999932 111 11223 356788888988876654 44566666666543
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.2e-22 Score=212.74 Aligned_cols=173 Identities=21% Similarity=0.468 Sum_probs=164.1
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
..|.+|+++|.++.|+++..+|++|+.+|+|++||+..++.++++.+|...+..+.|||-+.++++|+
T Consensus 64 ~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gS------------ 131 (825)
T KOG0267|consen 64 TSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGS------------ 131 (825)
T ss_pred heeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEecccc------------
Confidence 45899999999999999999999999999999999999999999999999999999999999998887
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h 162 (641)
.|+.+++||.+...|.+.+.+|...|..+.|+|+|.|+++|++|.+++|||...|+.+..|.+|
T Consensus 132 ----------------tdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~ 195 (825)
T KOG0267|consen 132 ----------------TDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSH 195 (825)
T ss_pred ----------------ccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccccc
Confidence 9999999999988899999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~ 203 (641)
.+.+.++.|||..-++.+||.|+++++||+++...+....+
T Consensus 196 e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~ 236 (825)
T KOG0267|consen 196 EGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKP 236 (825)
T ss_pred cccccccccCchhhhhccCCCCceeeeeccceeEEeeccCC
Confidence 99999999999999999999999999999998776655443
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.1e-20 Score=177.81 Aligned_cols=256 Identities=21% Similarity=0.244 Sum_probs=188.8
Q ss_pred EEEEeCCCcEEEEECcc------------CcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcce
Q psy9327 24 ILSSLHNGVIQLWDYRM------------NTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLF 91 (641)
Q Consensus 24 Lasg~~dg~I~iWD~~~------------~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~ 91 (641)
+++|+....|.=+++.. -.++..|..|.+++++++. +++++++|+
T Consensus 4 iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAV--s~~~~aSGs--------------------- 60 (362)
T KOG0294|consen 4 IIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAV--SGPYVASGS--------------------- 60 (362)
T ss_pred EEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEe--cceeEeccC---------------------
Confidence 56666665555554421 1235667899999999997 689999998
Q ss_pred eeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC--EEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEE
Q psy9327 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP--WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169 (641)
Q Consensus 92 ~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~--~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl 169 (641)
.|-+|+|||+++...+..+..|.+.|+++.|.+.-. +|+||++||.|.+|+.....++.++++|.+.|+.+
T Consensus 61 -------sDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~l 133 (362)
T KOG0294|consen 61 -------SDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDL 133 (362)
T ss_pred -------CCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeeccccccccee
Confidence 999999999999999999999999999999999765 99999999999999999999999999999999999
Q ss_pred EEecCCCEEEEEeCCCeEEEEecCCCceeeeccC-CCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCC-cceeeec
Q psy9327 170 QFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG-MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKM-EPLCNIH 247 (641)
Q Consensus 170 ~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~-~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~-~~~~~~~ 247 (641)
+.||.+.+.+|.+.|+.++.||+-.++.-...+- +..... .|...+.-........|-+|.... .....+.
T Consensus 134 siHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v-------~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~ 206 (362)
T KOG0294|consen 134 SIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLV-------SWSPQGDHFVVSGRNKIDIYQLDNASVFREIE 206 (362)
T ss_pred EecCCCceEEEEcCCceeeeehhhcCccceeeccCCcceee-------EEcCCCCEEEEEeccEEEEEecccHhHhhhhh
Confidence 9999999999999999999999987765444331 111111 111111111122345566666332 2223333
Q ss_pred CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEeccccc-------eE-EEEEcCcEEEEEeCCCCeEEEEeCCc
Q psy9327 248 ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLP-------IY-ITKIKGNQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 248 ~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~p-------~~-~~~~~g~~v~~~~~dg~i~v~~~~~~ 317 (641)
...++.++.|.. +..|++|.++..+.+|+.++++..+.... ++ .....+..+++++.||.|++|+++..
T Consensus 207 ~~~r~l~~~~l~-~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 207 NPKRILCATFLD-GSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred ccccceeeeecC-CceEEEecCCceEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence 356778888875 46788888889999998887554322110 11 13345678999999999999999864
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.6e-20 Score=185.67 Aligned_cols=276 Identities=18% Similarity=0.258 Sum_probs=190.7
Q ss_pred eeeccCCCCeEEEEEccCCC--eEEEEeCCCcEEEEECccCc----ccccccccccCeEEEEEeCCC-CEEEEece-eeE
Q psy9327 3 TKFETKSARVKGLSFHPKRP--WILSSLHNGVIQLWDYRMNT----LLEKFDEHEGPVRGICFHNQQ-PIFVSGGK-MIV 74 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~--~Lasg~~dg~I~iWD~~~~~----~l~~~~~h~~~V~~i~fsp~~-~~l~sgs~-~~~ 74 (641)
....-|.++|++++|||..+ ++|+|..-|+|-+||+.+.+ -+..|..|+++|.+|.|+|.. ..+++++. +.+
T Consensus 180 ~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGti 259 (498)
T KOG4328|consen 180 NVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTI 259 (498)
T ss_pred ceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCcee
Confidence 34567889999999999654 88999999999999996332 355677899999999999953 45555552 221
Q ss_pred Eee--ec-------------eeeecccCCcceeeEEEeeCCCeEEEEECCCCee-EEEEccCCCCeEEEEEccCCC-EEE
Q psy9327 75 MAY--QG-------------CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC-IFTLLGHLDYIRTTFFHHEYP-WIL 137 (641)
Q Consensus 75 ~~~--~~-------------~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~-~~~~~~h~~~V~~v~fsp~~~-~l~ 137 (641)
-.. .+ ...+....+.....+..+.+=|...+||.+++.. ...+.-|...|++++++|..+ +|+
T Consensus 260 R~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~la 339 (498)
T KOG4328|consen 260 RLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLA 339 (498)
T ss_pred eeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchhee
Confidence 111 11 1122233333344444556666899999998754 666777999999999999877 578
Q ss_pred EEeCCCeEEEEECCCCe----eEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecC----CCceeeeccC---CCc
Q psy9327 138 SASDDQTIRIWYWQSRN----CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS----GLRKKNVAPG---MGK 206 (641)
Q Consensus 138 sgs~Dg~I~vWd~~~~~----~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~----~~~~~~~~~~---~~~ 206 (641)
+||.|++.+|||++.-. ++.....|...|.++.|||.+-.|++.+.|..|||||.. ......+++. +++
T Consensus 340 T~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~R 419 (498)
T KOG4328|consen 340 TASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGR 419 (498)
T ss_pred ecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceeeccCcccc
Confidence 99999999999997532 233344699999999999988779999999999999984 2223333331 122
Q ss_pred eeeecccCCCceeeeee-eeeeCCCeeEEEecCCCcc-eeeecC--CcceEE-EEEcCCccEEE-EecCCeEEEEEcCCC
Q psy9327 207 LVLSMKSKHPIWKYCKP-VKYCNPKHTLHICNRKMEP-LCNIHE--NTRVKS-GAWDESGVFIY-TTSNHIKYAIVNGDH 280 (641)
Q Consensus 207 ~v~s~~~~~~v~~~~~~-l~s~~~d~~I~i~d~~~~~-~~~~~~--~~~I~s-la~~p~g~~L~-t~s~~~k~~l~~~~~ 280 (641)
++ ..+...|+.... ++.+.....|.++|.++.+ ++.++. ...|.+ ..|+|.+..++ .++..|++++|..+.
T Consensus 420 wl---T~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~k~ 496 (498)
T KOG4328|consen 420 WL---TPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAGGNSSGKIYVFTNKK 496 (498)
T ss_pred cc---cchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccccceeccCCccceEEEEecCC
Confidence 22 223334443332 4556677779999976665 566554 224444 48999988444 455789999887554
Q ss_pred C
Q psy9327 281 G 281 (641)
Q Consensus 281 g 281 (641)
+
T Consensus 497 ~ 497 (498)
T KOG4328|consen 497 S 497 (498)
T ss_pred C
Confidence 3
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-20 Score=188.23 Aligned_cols=234 Identities=18% Similarity=0.205 Sum_probs=183.0
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc-ccccCeEEEEEeCCCCEEEEeceee---EEe
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD-EHEGPVRGICFHNQQPIFVSGGKMI---VMA 76 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~-~h~~~V~~i~fsp~~~~l~sgs~~~---~~~ 76 (641)
+.+++.+|..+|..+.||||.++|++|+.|..+.+||+.+|.....+. +|...+.+.+|.|||..+++|+... .+.
T Consensus 261 l~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wd 340 (519)
T KOG0293|consen 261 LKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWD 340 (519)
T ss_pred eeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEec
Confidence 357899999999999999999999999999999999999999988885 3568899999999999999998432 233
Q ss_pred eeceeeecccCCcce-----------eeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeE
Q psy9327 77 YQGCILESRNEPCLF-----------RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTI 145 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~-----------~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I 145 (641)
++|.+...+.....+ .++.+...|..|++++.++........ -..+|++.+.+.+++++++.-.+..+
T Consensus 341 lDgn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lis-e~~~its~~iS~d~k~~LvnL~~qei 419 (519)
T KOG0293|consen 341 LDGNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLIS-EEQPITSFSISKDGKLALVNLQDQEI 419 (519)
T ss_pred CCcchhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhcccc-ccCceeEEEEcCCCcEEEEEcccCee
Confidence 345444333222211 122233467788888887665544343 45789999999999999999999999
Q ss_pred EEEECCCCeeEEEEccCCCC--EEEEEEec-CCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeee
Q psy9327 146 RIWYWQSRNCICVLTGHNHY--VMCAQFHP-TDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCK 222 (641)
Q Consensus 146 ~vWd~~~~~~i~~l~~h~~~--V~sl~fsp-~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~ 222 (641)
.+||++....+..+.||.-. +-.-+|-- +..+++|||+|+.|+||+..+++.+..++||.+.|.+++. +|.-..
T Consensus 420 ~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVsw-NP~~p~-- 496 (519)
T KOG0293|consen 420 HLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSW-NPADPE-- 496 (519)
T ss_pred EEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEec-CCCCHH--
Confidence 99999998888889888643 44445544 5589999999999999999999999999999988877543 232111
Q ss_pred eeeeeCCCeeEEEecC
Q psy9327 223 PVKYCNPKHTLHICNR 238 (641)
Q Consensus 223 ~l~s~~~d~~I~i~d~ 238 (641)
.+++++.|++|+||..
T Consensus 497 m~ASasDDgtIRIWg~ 512 (519)
T KOG0293|consen 497 MFASASDDGTIRIWGP 512 (519)
T ss_pred HhhccCCCCeEEEecC
Confidence 1678999999999973
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-19 Score=189.96 Aligned_cols=196 Identities=14% Similarity=0.188 Sum_probs=148.9
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEec---CCCEEEEEeCCCeEEEEec-CCCce
Q psy9327 122 DYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP---TDDIVVSASLDQTIRVWDI-SGLRK 197 (641)
Q Consensus 122 ~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp---~g~~lvSgs~DgtI~IWD~-~~~~~ 197 (641)
-.+++++.+|++++|++|..-|.++||++++-+....+.+|...|.|+.|+- ...+|+|+|.|..|.|+|. ++...
T Consensus 460 ~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l 539 (1080)
T KOG1408|consen 460 FGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDL 539 (1080)
T ss_pred cceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccch
Confidence 4689999999999999999999999999999988889999999999999986 3478999999999999998 45556
Q ss_pred eeeccCCCceeeecccCCC----------------------------------------ceeeee-----eeeeeCCCee
Q psy9327 198 KNVAPGMGKLVLSMKSKHP----------------------------------------IWKYCK-----PVKYCNPKHT 232 (641)
Q Consensus 198 ~~~~~~~~~~v~s~~~~~~----------------------------------------v~~~~~-----~l~s~~~d~~ 232 (641)
.+++.+|...+.++..... ++++.. -++++..|..
T Consensus 540 ~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrn 619 (1080)
T KOG1408|consen 540 VQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRN 619 (1080)
T ss_pred hhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccc
Confidence 6677776655543220000 111100 1677789999
Q ss_pred EEEec-CCCcceeeecC----CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe-cc-c---c-ceEEEEEcCcEEE
Q psy9327 233 LHICN-RKMEPLCNIHE----NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR-TL-D---L-PIYITKIKGNQVY 301 (641)
Q Consensus 233 I~i~d-~~~~~~~~~~~----~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~-~~-d---~-p~~~~~~~g~~v~ 301 (641)
|+||| .++++.+.+.. .+....+..||.|.|++|.+.|..+.+++--.|... .+ . . +-..+..+-..++
T Consensus 620 irif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlI 699 (1080)
T KOG1408|consen 620 IRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLI 699 (1080)
T ss_pred eEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccchhhe
Confidence 99999 66677777653 467778999999999999999999998876555321 11 0 0 1112345668899
Q ss_pred EEeCCCCeEEEEeCCc
Q psy9327 302 YLDRECSPHVLRIDPT 317 (641)
Q Consensus 302 ~~~~dg~i~v~~~~~~ 317 (641)
+.+.||.|++|.+..+
T Consensus 700 SvsgDgCIFvW~lp~~ 715 (1080)
T KOG1408|consen 700 SVSGDGCIFVWKLPLT 715 (1080)
T ss_pred eecCCceEEEEECchh
Confidence 9999999999999863
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.3e-20 Score=188.20 Aligned_cols=203 Identities=21% Similarity=0.397 Sum_probs=160.0
Q ss_pred eeccCCCCeEEEEEccCCC-eEEEEeCCCcEEEEECccCc-------ccccccccccCeEEEEEeCC-CCEEEEeceeeE
Q psy9327 4 KFETKSARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNT-------LLEKFDEHEGPVRGICFHNQ-QPIFVSGGKMIV 74 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~-------~l~~~~~h~~~V~~i~fsp~-~~~l~sgs~~~~ 74 (641)
++.||++.=.+|+|++... .|++|+.|++|.+||+.... ....|.+|+..|..++||+. ..+|++++
T Consensus 172 ~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~---- 247 (422)
T KOG0264|consen 172 RLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVG---- 247 (422)
T ss_pred EEEeecccccccccccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeec----
Confidence 6789998888999999554 78999999999999986432 34557899999999999995 55677776
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEECC--CCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECC
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK--QRKCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQ 151 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~--t~~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~ 151 (641)
+|+.+.|||.+ +.++.....+|.++|.|++|+| ++..||+||.|++|.+||++
T Consensus 248 ------------------------dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlR 303 (422)
T KOG0264|consen 248 ------------------------DDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLR 303 (422)
T ss_pred ------------------------CCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeech
Confidence 99999999999 5677778889999999999999 56688999999999999998
Q ss_pred CC-eeEEEEccCCCCEEEEEEecC-CCEEEEEeCCCeEEEEecCCCceeeec--------------cCCCceeeecccCC
Q psy9327 152 SR-NCICVLTGHNHYVMCAQFHPT-DDIVVSASLDQTIRVWDISGLRKKNVA--------------PGMGKLVLSMKSKH 215 (641)
Q Consensus 152 ~~-~~i~~l~~h~~~V~sl~fsp~-g~~lvSgs~DgtI~IWD~~~~~~~~~~--------------~~~~~~v~s~~~~~ 215 (641)
+- .++.++.+|.+.|.++.|+|. ...|+|++.|+.+.|||+..-...+.. .||...|..+
T Consensus 304 nL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~Df---- 379 (422)
T KOG0264|consen 304 NLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDF---- 379 (422)
T ss_pred hcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccc----
Confidence 74 578999999999999999996 578999999999999999764433321 1111111110
Q ss_pred Cceeee--eeeeeeCCCeeEEEecCC
Q psy9327 216 PIWKYC--KPVKYCNPKHTLHICNRK 239 (641)
Q Consensus 216 ~v~~~~--~~l~s~~~d~~I~i~d~~ 239 (641)
-|..+ ..++++..|+.+.||...
T Consensus 380 -sWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 380 -SWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred -cCCCCCCeEEEEecCCceEEEeecc
Confidence 11111 127788899999999844
|
|
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.6e-26 Score=244.64 Aligned_cols=245 Identities=22% Similarity=0.281 Sum_probs=161.0
Q ss_pred CCCCCCccCCCCCCCccccCCccccccCCCccceeec--ccccCCcHHHHHHHHHhhcceeecCcchHHHH-HHhhcCce
Q psy9327 384 TADPNATLPTVHPEAQLLRPPAPVAEAETNWPLLTVS--KSFFEGSFETAFKLLHDQIGVKNFLPYRQMFL-NSYLQSRT 460 (641)
Q Consensus 384 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 460 (641)
.+..|++|.++|....+.+ ..++.|.+++.. ++...|. +-..+|..++.++..+....+.+ +.+.+..+
T Consensus 31 ~~~~p~~ls~npngr~v~V------~g~geY~iyt~~~~r~k~~G~--g~~~vw~~~n~yAv~~~~~~I~I~kn~~~~~~ 102 (443)
T PF04053_consen 31 CEIYPQSLSHNPNGRFVLV------CGDGEYEIYTALAWRNKAFGS--GLSFVWSSRNRYAVLESSSTIKIYKNFKNEVV 102 (443)
T ss_dssp -SS--SEEEE-TTSSEEEE------EETTEEEEEETTTTEEEEEEE---SEEEE-TSSEEEEE-TTS-EEEEETTEE-TT
T ss_pred CCcCCeeEEECCCCCEEEE------EcCCEEEEEEccCCcccccCc--eeEEEEecCccEEEEECCCeEEEEEcCccccc
Confidence 4445778888877766665 145667666522 1100021 12234555788899888666666 88888887
Q ss_pred eecCCCCCCceeeccCCCCCCCCCCCCC-cccccHHHHHH------HHHhhhhhcccccHHHHHHHHHHHhhhccee---
Q psy9327 461 AYSTLPLLAPVMAFPTRKGPGIKENSHP-ATNIKLEQLIA------KIQQCYQLTTSGKFVDAIEKLRNVLISIPLL--- 530 (641)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 530 (641)
+...+|. ++..+|. |..+...... +..||.++-.. ...+++.|+.+|++++.+++....+....+.
T Consensus 103 k~i~~~~-~~~~If~---G~LL~~~~~~~i~~yDw~~~~~i~~i~v~~vk~V~Ws~~g~~val~t~~~i~il~~~~~~~~ 178 (443)
T PF04053_consen 103 KSIKLPF-SVEKIFG---GNLLGVKSSDFICFYDWETGKLIRRIDVSAVKYVIWSDDGELVALVTKDSIYILKYNLEAVA 178 (443)
T ss_dssp -----SS--EEEEE----SSSEEEEETTEEEEE-TTT--EEEEESS-E-EEEEE-TTSSEEEEE-S-SEEEEEE-HHHHH
T ss_pred eEEcCCc-ccceEEc---CcEEEEECCCCEEEEEhhHcceeeEEecCCCcEEEEECCCCEEEEEeCCeEEEEEecchhcc
Confidence 8888876 6777888 5555444444 77788887322 2357899999999999999998888888888
Q ss_pred ---------eecCHHH-HHHHHHHHHHHhHHHHHH-HHHHHhhcCCCcccccccccceeeeeeCc--ceeEEeeCCCCce
Q psy9327 531 ---------VVTTKKE-IEEAKQIINICKEYIVGT-NHIKYAIVNGDHGIIRTLDLPIYITKIKG--NQVYYLDRECSPH 597 (641)
Q Consensus 531 ---------~~~~~~e-~~~~~~~~~~~~~~~~~~-~~~~~~l~~~d~~~~r~le~~~y~t~~~~--~~~~~~~~~~~~~ 597 (641)
..+..+| ..++|+.+|+..=+++++ +|++| +++||.|++++||.|.|+.+... +.|||+||++.+.
T Consensus 179 ~~~~~g~e~~f~~~~E~~~~IkSg~W~~d~fiYtT~~~lkY-l~~Ge~~~i~~ld~~~yllgy~~~~~~ly~~Dr~~~v~ 257 (443)
T PF04053_consen 179 AIPEEGVEDAFELIHEISERIKSGCWVEDCFIYTTSNHLKY-LVNGETGIIAHLDKPLYLLGYLPKENRLYLIDRDGNVI 257 (443)
T ss_dssp HBTTTB-GGGEEEEEEE-S--SEEEEETTEEEEE-TTEEEE-EETTEEEEEEE-SS--EEEEEETTTTEEEEE-TT--EE
T ss_pred cccccCchhceEEEEEecceeEEEEEEcCEEEEEcCCeEEE-EEcCCcceEEEcCCceEEEEEEccCCEEEEEECCCCEE
Confidence 8888999 999999999988444333 89999 77999999999999999999999 9999999999999
Q ss_pred EEEeCCcchhhhHHHhccChhHHHHhhhcCccc-------hhhhHhhhhcC
Q psy9327 598 VLRIDPTEFKFKLALINHKYEEVLHIVRNSRLV-------GQSIIAYLQQK 641 (641)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 641 (641)
.++||++||+||+|+++++|++|++||++++|+ ||+||+|||||
T Consensus 258 ~~~ld~~~~~fk~av~~~d~~~v~~~i~~~~ll~~i~~~~~~~i~~fL~~~ 308 (443)
T PF04053_consen 258 SYELDLSELEFKTAVLRGDFEEVLRMIAASNLLPNIPKDQGQSIARFLEKK 308 (443)
T ss_dssp EEE--HHHHHHHHHHHTT-HHH-----HHHHTGGG--HHHHHHHHHHHHHT
T ss_pred EEEECHHHHHHHHHHHcCChhhhhhhhhhhhhcccCChhHHHHHHHHHHHC
Confidence 999999999999999999999999999999999 99999999987
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.2e-19 Score=171.81 Aligned_cols=172 Identities=24% Similarity=0.282 Sum_probs=146.1
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
|+-|.||...|++|+.+|-++.++|++.|++|++||++..++...+.....+ .++|.|+|-++|++.
T Consensus 93 lRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~p--i~AfDp~GLifA~~~----------- 159 (311)
T KOG1446|consen 93 LRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRP--IAAFDPEGLIFALAN----------- 159 (311)
T ss_pred EEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCc--ceeECCCCcEEEEec-----------
Confidence 6789999999999999999999999999999999999977765555333333 579999999999997
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCC--eeEEEEcc---CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQR--KCIFTLLG---HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~--~~~~~~~~---h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i 156 (641)
....|++||+++- .+..+|.- -......+.|+|+|+.++.+...+.+++.|.-+|..+
T Consensus 160 -----------------~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~ 222 (311)
T KOG1446|consen 160 -----------------GSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVK 222 (311)
T ss_pred -----------------CCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEe
Confidence 5669999999863 45555543 3667899999999999999999999999999999999
Q ss_pred EEEccCCCCE---EEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC
Q psy9327 157 CVLTGHNHYV---MCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203 (641)
Q Consensus 157 ~~l~~h~~~V---~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~ 203 (641)
.++.++...- -..+|.||+.++++|+.||+|.+|++++++....+.+
T Consensus 223 ~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~ 272 (311)
T KOG1446|consen 223 STFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRG 272 (311)
T ss_pred eeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecC
Confidence 9988765443 5788999999999999999999999999887776654
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.6e-18 Score=172.35 Aligned_cols=316 Identities=11% Similarity=0.201 Sum_probs=234.0
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCC--------cEEEEECccCcccccccccccCeEEEEEeC--CCCEEEEecee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNG--------VIQLWDYRMNTLLEKFDEHEGPVRGICFHN--QQPIFVSGGKM 72 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg--------~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp--~~~~l~sgs~~ 72 (641)
+.|.+|...|.|++.|||.-.+++|-..| .+++||..+-..+..+...+..|.|++|++ .|.+++.-.+.
T Consensus 98 r~y~GH~ddikc~~vHPdri~vatGQ~ag~~g~~~~phvriWdsv~L~TL~V~g~f~~GV~~vaFsk~~~G~~l~~vD~s 177 (626)
T KOG2106|consen 98 RHYLGHNDDIKCMAVHPDRIRVATGQGAGTSGRPLQPHVRIWDSVTLSTLHVIGFFDRGVTCVAFSKINGGSLLCAVDDS 177 (626)
T ss_pred ccccCCCCceEEEeecCCceeeccCcccccCCCcCCCeeeecccccceeeeeeccccccceeeeecccCCCceEEEecCC
Confidence 56889999999999999999999886655 499999877777777777788999999997 45666665522
Q ss_pred e-----EEee------------eceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEE---EEccCC-CCeEEEEEcc
Q psy9327 73 I-----VMAY------------QGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIF---TLLGHL-DYIRTTFFHH 131 (641)
Q Consensus 73 ~-----~~~~------------~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~---~~~~h~-~~V~~v~fsp 131 (641)
. +|.| +..+....++|..++...+++. +.+..|+.+.+.... .|+.++ ..|.|++|.+
T Consensus 178 ~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk-~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~e 256 (626)
T KOG2106|consen 178 NPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGK-GHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLE 256 (626)
T ss_pred CccccchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCC-ceEEEEEccCCceEEEeeccccccceEEEEEEEcC
Confidence 1 1222 2345556778888888888776 578999999875543 355443 5799999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeee--ccCCCceee
Q psy9327 132 EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNV--APGMGKLVL 209 (641)
Q Consensus 132 ~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~--~~~~~~~v~ 209 (641)
+|. +++|..+|.|.||+..+.+.......|.+.|.+++.-.+|.++- |+.|..|..|| ...+.++. +|..-..+.
T Consensus 257 ngd-viTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllS-GgKDRki~~Wd-~~y~k~r~~elPe~~G~iR 333 (626)
T KOG2106|consen 257 NGD-VITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLS-GGKDRKIILWD-DNYRKLRETELPEQFGPIR 333 (626)
T ss_pred CCC-EEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEee-cCccceEEecc-ccccccccccCchhcCCee
Confidence 987 88999999999999988877776669999999999999887665 99999999999 33333222 222111222
Q ss_pred ecccCCC------------------------------ceeeee-----eeeeeCCCeeEEEecCCCcceeeecCCcceEE
Q psy9327 210 SMKSKHP------------------------------IWKYCK-----PVKYCNPKHTLHICNRKMEPLCNIHENTRVKS 254 (641)
Q Consensus 210 s~~~~~~------------------------------v~~~~~-----~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~s 254 (641)
.+...++ .|.... .+++++.|+.+++|+ ......+..-..+..+
T Consensus 334 tv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~-~~k~~wt~~~~d~~~~ 412 (626)
T KOG2106|consen 334 TVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN-DHKLEWTKIIEDPAEC 412 (626)
T ss_pred EEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc-CCceeEEEEecCceeE
Confidence 2121111 222111 178899999999999 4444455555788999
Q ss_pred EEEcCCccEEEEecCCeEEEEEcCCCCeE---eccccceEE--EEEcCcEEEEEeCCCCeEEEEeCCcchhhhHH
Q psy9327 255 GAWDESGVFIYTTSNHIKYAIVNGDHGII---RTLDLPIYI--TKIKGNQVYYLDRECSPHVLRIDPTEFKFKLA 324 (641)
Q Consensus 255 la~~p~g~~L~t~s~~~k~~l~~~~~g~I---~~~d~p~~~--~~~~g~~v~~~~~dg~i~v~~~~~~~~~~k~~ 324 (641)
+.|+|.| .++.|+..|+..+.+.++... ++-..|+.. ...+|..+..++.|+.+.++.++.....++..
T Consensus 413 ~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~ 486 (626)
T KOG2106|consen 413 ADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRV 486 (626)
T ss_pred eeccCcc-eEEEeeccceEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEe
Confidence 9999999 899999999999999887643 333444444 55789999999999999999999877666544
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.5e-19 Score=170.83 Aligned_cols=243 Identities=12% Similarity=0.219 Sum_probs=183.3
Q ss_pred eEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcce
Q psy9327 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLF 91 (641)
Q Consensus 12 V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~ 91 (641)
-.|+.|++.|.+||+|+.||.|.|||+.+...-+.+.+|-.||.+++||++|+.|++++
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS--------------------- 84 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSS--------------------- 84 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeec---------------------
Confidence 78999999999999999999999999999988888999999999999999999999998
Q ss_pred eeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeE----------------------------------------------
Q psy9327 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIR---------------------------------------------- 125 (641)
Q Consensus 92 ~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~---------------------------------------------- 125 (641)
.|..|.+||+..|.+++.+. ...+|.
T Consensus 85 -------~D~si~lwDl~~gs~l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sa 156 (405)
T KOG1273|consen 85 -------RDWSIKLWDLLKGSPLKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSA 156 (405)
T ss_pred -------CCceeEEEeccCCCceeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCcccccccc
Confidence 89999999998887665543 111111
Q ss_pred -EEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCC-CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC
Q psy9327 126 -TTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN-HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203 (641)
Q Consensus 126 -~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~-~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~ 203 (641)
+..|++.|+++++|...|.+.++|..+-+|+..++--. ..|..+-|+..|+.++..+.|+.||.|+++......
T Consensus 157 s~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~---- 232 (405)
T KOG1273|consen 157 SHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEG---- 232 (405)
T ss_pred ccccccCCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccC----
Confidence 22356678899999999999999999999998887555 778999999999999999999999999987421100
Q ss_pred CCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcce---eeecCCcceEEEEEcCCccEEEEecC-CeEEEEEcCC
Q psy9327 204 MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPL---CNIHENTRVKSGAWDESGVFIYTTSN-HIKYAIVNGD 279 (641)
Q Consensus 204 ~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~---~~~~~~~~I~sla~~p~g~~L~t~s~-~~k~~l~~~~ 279 (641)
.++ ..++. ..+-....-++++|+.+|.|+..++. ...+++|...
T Consensus 233 -------------------------r~~-------e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~ 280 (405)
T KOG1273|consen 233 -------------------------RDG-------EVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKS 280 (405)
T ss_pred -------------------------ccC-------CcChhHHHHHHHhhhhhhheeecCCccEEEeccccceeEEEEecC
Confidence 000 00000 01111334466899999999998884 4467899877
Q ss_pred CCe-Eeccccce------EEEEEcCcEEEEEeCCCCeEEEEeCCcchh
Q psy9327 280 HGI-IRTLDLPI------YITKIKGNQVYYLDRECSPHVLRIDPTEFK 320 (641)
Q Consensus 280 ~g~-I~~~d~p~------~~~~~~g~~v~~~~~dg~i~v~~~~~~~~~ 320 (641)
.|+ |+++..+- ..|+.-...+.+. ..|.+++|.....+--
T Consensus 281 ~GsLVKILhG~kgE~l~DV~whp~rp~i~si-~sg~v~iw~~~~~enw 327 (405)
T KOG1273|consen 281 IGSLVKILHGTKGEELLDVNWHPVRPIIASI-ASGVVYIWAVVQVENW 327 (405)
T ss_pred CcceeeeecCCchhheeecccccceeeeeec-cCCceEEEEeecccch
Confidence 765 56665541 1144444555555 7799999988765543
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.6e-19 Score=179.38 Aligned_cols=220 Identities=17% Similarity=0.242 Sum_probs=179.0
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
.++|.+++-+|+|.+|+.|+..|.+++|.+.+|.++..+..|-.+|+|+.|+.|+.+|++||
T Consensus 81 Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgs------------------ 142 (476)
T KOG0646|consen 81 PGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGS------------------ 142 (476)
T ss_pred ccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecC------------------
Confidence 47899999999999999999999999999999999999999999999999999999999998
Q ss_pred cceeeEEEeeCCCeEEEEECC---------CCeeEEEEccCCCCeEEEEEccC--CCEEEEEeCCCeEEEEECCCCeeEE
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYK---------QRKCIFTLLGHLDYIRTTFFHHE--YPWILSASDDQTIRIWYWQSRNCIC 157 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~---------t~~~~~~~~~h~~~V~~v~fsp~--~~~l~sgs~Dg~I~vWd~~~~~~i~ 157 (641)
.||.|.+|++. +-++++.|.+|.-+|+++...+. ...++|+|.|.++++||+..+..+.
T Consensus 143 ----------kDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLl 212 (476)
T KOG0646|consen 143 ----------KDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLL 212 (476)
T ss_pred ----------CCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeE
Confidence 99999999863 34678999999999999987765 4589999999999999999999887
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
++. ....+++++..|-++.+..|+.+|.|.+.++.+..... ..+. ....|+
T Consensus 213 ti~-fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~------~~v~-~k~~~~--------------------- 263 (476)
T KOG0646|consen 213 TIT-FPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQS------AGVN-QKGRHE--------------------- 263 (476)
T ss_pred EEe-cCCcceeEEEcccccEEEecCCcceEEeeehhcCCccc------cccc-cccccc---------------------
Confidence 776 56789999999999999999999999999886533211 0000 000110
Q ss_pred CCCcceeee-cC--CcceEEEEEcCCccEEEEecCCeEEEEEcCCC-CeEecc
Q psy9327 238 RKMEPLCNI-HE--NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH-GIIRTL 286 (641)
Q Consensus 238 ~~~~~~~~~-~~--~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~-g~I~~~ 286 (641)
....+..+ .+ ...|++++.+-||..|++|+.||++++|+... ..||++
T Consensus 264 -~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl 315 (476)
T KOG0646|consen 264 -ENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTL 315 (476)
T ss_pred -ccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHH
Confidence 11111111 12 36899999999999999999999999998544 345544
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.7e-19 Score=167.75 Aligned_cols=197 Identities=14% Similarity=0.185 Sum_probs=165.9
Q ss_pred eccCCCCeEEEEEccC-CCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceee-EEeeec---
Q psy9327 5 FETKSARVKGLSFHPK-RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMI-VMAYQG--- 79 (641)
Q Consensus 5 ~~~H~~~V~~l~fspd-g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~-~~~~~~--- 79 (641)
+.+|.+.|-.++|+|. .+++++++.|.+|++||.+.++++.......+.+. +.|+|+|.+++++++.- +...+.
T Consensus 60 ~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~eni~-i~wsp~g~~~~~~~kdD~it~id~r~~ 138 (313)
T KOG1407|consen 60 YRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETKGENIN-ITWSPDGEYIAVGNKDDRITFIDARTY 138 (313)
T ss_pred ccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeeccCcceE-EEEcCCCCEEEEecCcccEEEEEeccc
Confidence 5689999999999985 45899999999999999999999988877666654 89999999999998422 111111
Q ss_pred ---------eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEEC
Q psy9327 80 ---------CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYW 150 (641)
Q Consensus 80 ---------~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~ 150 (641)
.......+.+...+.......|+|.|..+..-+++.+++.|.....|+.|+|+|++|++|+.|..+-+||+
T Consensus 139 ~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~ 218 (313)
T KOG1407|consen 139 KIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDV 218 (313)
T ss_pred ceeehhcccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccCh
Confidence 11111122244455555666799999999999999999999999999999999999999999999999999
Q ss_pred CCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 151 QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 151 ~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
+.--|.+.+..+.-+|+++.|+.+|++|+|||+|..|-|=+..+|.....++
T Consensus 219 ~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~ 270 (313)
T KOG1407|consen 219 DELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIP 270 (313)
T ss_pred hHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEee
Confidence 9999999999999999999999999999999999999999999988877766
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.4e-18 Score=173.09 Aligned_cols=250 Identities=12% Similarity=0.083 Sum_probs=176.8
Q ss_pred ceeeccCCCCeEEEEEccCCCeE-EEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWI-LSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~L-asg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
+..+++|. .+.+++|+|++..+ ++++.++.|++||..+++.+..+..+.. +..++|+|++..+++++
T Consensus 24 ~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~---------- 91 (300)
T TIGR03866 24 TRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELFALHPNGKILYIAN---------- 91 (300)
T ss_pred EEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEEEECCCCCEEEEEc----------
Confidence 34566554 46789999999976 5677889999999999887776655444 46789999999776654
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCC-eEEEEECCCCeeEEEE
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ-TIRIWYWQSRNCICVL 159 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg-~I~vWd~~~~~~i~~l 159 (641)
+.|+.|++||+++++.+..+.. ...+.+++|+|++.++++++.++ .+.+||.++++.....
T Consensus 92 -----------------~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~ 153 (300)
T TIGR03866 92 -----------------EDDNLVTVIDIETRKVLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNV 153 (300)
T ss_pred -----------------CCCCeEEEEECCCCeEEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEE
Confidence 2789999999999888887763 33468899999999999888775 5778899888776554
Q ss_pred ccCCCCEEEEEEecCCCEEE-EEeCCCeEEEEecCCCceeeeccCCCceee--ecccCCCceeeeee--eeeeCCCeeEE
Q psy9327 160 TGHNHYVMCAQFHPTDDIVV-SASLDQTIRVWDISGLRKKNVAPGMGKLVL--SMKSKHPIWKYCKP--VKYCNPKHTLH 234 (641)
Q Consensus 160 ~~h~~~V~sl~fsp~g~~lv-Sgs~DgtI~IWD~~~~~~~~~~~~~~~~v~--s~~~~~~v~~~~~~--l~s~~~d~~I~ 234 (641)
. ....+.+++|+|++.+++ ++..++.|++||+.+++....+......+. ........+..... +.+...++.+.
T Consensus 154 ~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~ 232 (300)
T TIGR03866 154 L-VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVA 232 (300)
T ss_pred E-cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEE
Confidence 3 234567899999999875 445699999999999876655432110000 00000000110011 22334566799
Q ss_pred EecCC-CcceeeecCCcceEEEEEcCCccEEEEec-CCeEEEEEcCCCCe
Q psy9327 235 ICNRK-MEPLCNIHENTRVKSGAWDESGVFIYTTS-NHIKYAIVNGDHGI 282 (641)
Q Consensus 235 i~d~~-~~~~~~~~~~~~I~sla~~p~g~~L~t~s-~~~k~~l~~~~~g~ 282 (641)
+||.. .+.......+..+.+++|+|+|.+|++++ .++++.+|+.+++.
T Consensus 233 v~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~ 282 (300)
T TIGR03866 233 VVDAKTYEVLDYLLVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALK 282 (300)
T ss_pred EEECCCCcEEEEEEeCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCc
Confidence 99943 44444445566889999999999999875 58889999887765
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=7e-20 Score=196.48 Aligned_cols=165 Identities=21% Similarity=0.447 Sum_probs=142.7
Q ss_pred ceeeccCCCCeEEEEEccCCC-eEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCC-CCEEEEeceeeEEeeec
Q psy9327 2 LTKFETKSARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ-QPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~-~~~l~sgs~~~~~~~~~ 79 (641)
++.|..|+..|+++.||+..+ +|++|+.||+|++||++..+...+|.+.+..|+.+.|+|. +..|+++.
T Consensus 126 l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~--------- 196 (839)
T KOG0269|consen 126 LTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIH--------- 196 (839)
T ss_pred hhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEec---------
Confidence 567899999999999999654 7889999999999999999999999999999999999994 66788887
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCC-eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee--E
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC--I 156 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~-~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~--i 156 (641)
+.|.+++||++.. ++...+.+|.++|.|+.|||++.|||+||.|++|+|||+.+.+. +
T Consensus 197 -------------------dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~ 257 (839)
T KOG0269|consen 197 -------------------DSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPK 257 (839)
T ss_pred -------------------CCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccce
Confidence 8999999999864 67788999999999999999999999999999999999986653 3
Q ss_pred EEEccCCCCEEEEEEecCC-CEEEEEeC--CCeEEEEecCCC
Q psy9327 157 CVLTGHNHYVMCAQFHPTD-DIVVSASL--DQTIRVWDISGL 195 (641)
Q Consensus 157 ~~l~~h~~~V~sl~fsp~g-~~lvSgs~--DgtI~IWD~~~~ 195 (641)
.++. -..+|.++.|-|+. ..|++++. |-.|+|||++..
T Consensus 258 ~tIn-Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRP 298 (839)
T KOG0269|consen 258 HTIN-TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRP 298 (839)
T ss_pred eEEe-ecceeeeeeeccCccchhhhhhccccceEEEEeeccc
Confidence 3333 34678999999976 45777665 789999999753
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.9e-19 Score=184.47 Aligned_cols=286 Identities=15% Similarity=0.172 Sum_probs=192.0
Q ss_pred cCCCCeEE--EEEcc---CCCeEEEEeCCCcEEEEECccCc------ccccccccccCeEEEEEeCCCCEEEEeceeeEE
Q psy9327 7 TKSARVKG--LSFHP---KRPWILSSLHNGVIQLWDYRMNT------LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM 75 (641)
Q Consensus 7 ~H~~~V~~--l~fsp---dg~~Lasg~~dg~I~iWD~~~~~------~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~ 75 (641)
.|.-++.- ..|++ ....|+.+..||.|.++|..... .+..+..|.+.|..+.|.|....|++++
T Consensus 45 ~~~~p~pPf~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsas----- 119 (720)
T KOG0321|consen 45 NDGLPVPPFADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSAS----- 119 (720)
T ss_pred cCCCCCCCccccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEcc-----
Confidence 34444443 56765 34589999999999999976432 2456678999999999999777888887
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEE--EccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCC
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT--LLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQS 152 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~--~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~ 152 (641)
.|.++++||++++++... +.+|.+.|.+++|+|.++ .|++|+.||.|.|||++-
T Consensus 120 -----------------------GDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~ 176 (720)
T KOG0321|consen 120 -----------------------GDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRC 176 (720)
T ss_pred -----------------------CCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEec
Confidence 899999999999998877 899999999999999766 788999999999999864
Q ss_pred Ce---------------------------eEEEEccCCCCEEE---EEEecCCCEEEEEeC-CCeEEEEecCCCceeeec
Q psy9327 153 RN---------------------------CICVLTGHNHYVMC---AQFHPTDDIVVSASL-DQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 153 ~~---------------------------~i~~l~~h~~~V~s---l~fsp~g~~lvSgs~-DgtI~IWD~~~~~~~~~~ 201 (641)
.. .+....+|...|.+ +.+..|...|+|++. |+.|+|||++........
T Consensus 177 n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ 256 (720)
T KOG0321|consen 177 NGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQ 256 (720)
T ss_pred cchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeeccccccccc
Confidence 31 11222345444554 556678889999888 999999999976554333
Q ss_pred cCC--CceeeecccCCCceeeee------eeeeeCCCeeEEEecCC---CcceeeecC---CcceEEEEEcCCccEEEEe
Q psy9327 202 PGM--GKLVLSMKSKHPIWKYCK------PVKYCNPKHTLHICNRK---MEPLCNIHE---NTRVKSGAWDESGVFIYTT 267 (641)
Q Consensus 202 ~~~--~~~v~s~~~~~~v~~~~~------~l~s~~~d~~I~i~d~~---~~~~~~~~~---~~~I~sla~~p~g~~L~t~ 267 (641)
... .++...-...+.+-.++. .+++|. |+.|.+||.. ..+...+.+ ...-..-..+|++.++++|
T Consensus 257 ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCt-D~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~Sg 335 (720)
T KOG0321|consen 257 EPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCT-DNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSG 335 (720)
T ss_pred CCCcccCccCcccceeeeEEEEecCCCCeEEEEec-CCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEecc
Confidence 211 011100011111111111 145565 9999999933 233333332 2222334567999999999
Q ss_pred cCCeEEEEEcCCCCe----Eecccc-ceEE--EE-EcCcEEEEEeCCCCeEEEEeCCcchhh
Q psy9327 268 SNHIKYAIVNGDHGI----IRTLDL-PIYI--TK-IKGNQVYYLDRECSPHVLRIDPTEFKF 321 (641)
Q Consensus 268 s~~~k~~l~~~~~g~----I~~~d~-p~~~--~~-~~g~~v~~~~~dg~i~v~~~~~~~~~~ 321 (641)
+.+...++|..++-. +..++. .+.. |. ..-..+++.++|.++++|++.++....
T Consensus 336 Ssd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~l~e~ 397 (720)
T KOG0321|consen 336 SSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNGLEEI 397 (720)
T ss_pred CCCcceeeeeecCccCChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccCchhhc
Confidence 999999999765432 111111 1111 11 233455666999999999997654433
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-17 Score=177.36 Aligned_cols=278 Identities=13% Similarity=0.183 Sum_probs=210.4
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccc-cccc-ccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLL-EKFD-EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l-~~~~-~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
+.-..++|.+++|+.+.+.||.|-.||.|.+|++..+=.. ..+. +.+..|.+++|++.+++|-+|
T Consensus 21 ~d~~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g------------- 87 (691)
T KOG2048|consen 21 VDYKPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSG------------- 87 (691)
T ss_pred EeeeccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeec-------------
Confidence 3445688999999999999999999999999999875332 2233 346789999999777766665
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE--EEc
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC--VLT 160 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~--~l~ 160 (641)
-+|.|.-||+.+++.+..+....+.|.+++.+|.+..++.|++||.+...+...+.... .|.
T Consensus 88 ----------------~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~ 151 (691)
T KOG2048|consen 88 ----------------LSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLM 151 (691)
T ss_pred ----------------CCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecc
Confidence 69999999999999999999999999999999999999999999988888887776543 345
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeeccc--CCCceeeee----eeeeeCCCeeEE
Q psy9327 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKS--KHPIWKYCK----PVKYCNPKHTLH 234 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~--~~~v~~~~~----~l~s~~~d~~I~ 234 (641)
...++|.++.|+|++..+++||.||.|++||..++....... ..++.+.. .--+|.+.+ .+++|.+.|+|.
T Consensus 152 rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~---~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~V~ 228 (691)
T KOG2048|consen 152 RQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIIT---MQLDRLSKREPTIVWSVLFLRDSTIASGDSAGTVT 228 (691)
T ss_pred cccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEee---ecccccccCCceEEEEEEEeecCcEEEecCCceEE
Confidence 567899999999999999999999999999999887766221 11111111 122565543 278999999999
Q ss_pred Eec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEecccc------c---eEEEEEcCcEEEEE
Q psy9327 235 ICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDL------P---IYITKIKGNQVYYL 303 (641)
Q Consensus 235 i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~------p---~~~~~~~g~~v~~~ 303 (641)
+|| ..+..+..+. +...|.+++-++++..+++++-|+++..+....+.- .|.. + +.....-+..++++
T Consensus 229 FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~-~wv~~~~r~~h~hdvrs~av~~~~l~sg 307 (691)
T KOG2048|consen 229 FWDSIFGTLIQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKS-EWVINSRRDLHAHDVRSMAVIENALISG 307 (691)
T ss_pred EEcccCcchhhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCcc-ceeeeccccCCcccceeeeeecceEEec
Confidence 999 4555555554 478999999999999999999999888665433311 1211 1 11222345577777
Q ss_pred eCCCCeEEEEeC
Q psy9327 304 DRECSPHVLRID 315 (641)
Q Consensus 304 ~~dg~i~v~~~~ 315 (641)
.+|..+.+-...
T Consensus 308 G~d~~l~i~~s~ 319 (691)
T KOG2048|consen 308 GRDFTLAICSSR 319 (691)
T ss_pred ceeeEEEEcccc
Confidence 788777665443
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-18 Score=178.45 Aligned_cols=273 Identities=12% Similarity=0.210 Sum_probs=201.6
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC---ccccccc--ccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN---TLLEKFD--EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~---~~l~~~~--~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.|.+-|.++..|...+.+.+|+. |.|+|||+... ..+..+. ..+.-|+++..+|||+.|++||
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGG----------- 484 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGG----------- 484 (705)
T ss_pred ccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEecc-----------
Confidence 58888999999999999999986 77999998643 2333332 3567899999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeE--EEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCI--FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~--~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l 159 (641)
.-.++.|||+..-++. ..+....-...+++.+||.+..+++..||.|.|||+.+...++.|
T Consensus 485 -----------------eastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~Vrqf 547 (705)
T KOG0639|consen 485 -----------------EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQF 547 (705)
T ss_pred -----------------ccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecc
Confidence 8889999999765433 334433446778999999999999999999999999999999999
Q ss_pred ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccC-CCceeeeeeeeeeCCCeeEEEecC
Q psy9327 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSK-HPIWKYCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 160 ~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~-~~v~~~~~~l~s~~~d~~I~i~d~ 238 (641)
.||.+.+.|+..+++|..|.||+.|.+||-||++.++...... +...|+++... ..-| ++.|-..+.+.+-..
T Consensus 548 qGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhd-F~SQIfSLg~cP~~dW-----lavGMens~vevlh~ 621 (705)
T KOG0639|consen 548 QGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHD-FSSQIFSLGYCPTGDW-----LAVGMENSNVEVLHT 621 (705)
T ss_pred cCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhh-hhhhheecccCCCccc-----eeeecccCcEEEEec
Confidence 9999999999999999999999999999999999987654332 22333332211 1122 334445666666553
Q ss_pred CC-cceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecc-cc-ceEE--EEEcCcEEEEEeCCCCeEEE
Q psy9327 239 KM-EPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTL-DL-PIYI--TKIKGNQVYYLDRECSPHVL 312 (641)
Q Consensus 239 ~~-~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~-d~-p~~~--~~~~g~~v~~~~~dg~i~v~ 312 (641)
+. .......+...|.++.|.+.|+++++++.|.-+-.|..--|. |... +. ++.. +..++..+++++.|.+..|+
T Consensus 622 skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE~SsVlsCDIS~ddkyIVTGSGdkkATVY 701 (705)
T KOG0639|consen 622 SKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISFDDKYIVTGSGDKKATVY 701 (705)
T ss_pred CCccceeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeeccccCcceeeeeccCceEEEecCCCcceEEE
Confidence 33 333333457899999999999999998877777666644332 2211 11 1111 33567888898888777776
Q ss_pred Ee
Q psy9327 313 RI 314 (641)
Q Consensus 313 ~~ 314 (641)
.+
T Consensus 702 eV 703 (705)
T KOG0639|consen 702 EV 703 (705)
T ss_pred EE
Confidence 54
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.9e-19 Score=175.18 Aligned_cols=165 Identities=22% Similarity=0.420 Sum_probs=141.1
Q ss_pred ceeeccCCCCeEEEEEccCC-CeEEEEeCCCcEEEEECccCcc---cccccccccCeEEEEEeCCC-CEEEEeceeeEEe
Q psy9327 2 LTKFETKSARVKGLSFHPKR-PWILSSLHNGVIQLWDYRMNTL---LEKFDEHEGPVRGICFHNQQ-PIFVSGGKMIVMA 76 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg-~~Lasg~~dg~I~iWD~~~~~~---l~~~~~h~~~V~~i~fsp~~-~~l~sgs~~~~~~ 76 (641)
|.++.+|...=.+|+|||-. -.|++|..-+.|++|...+|.- -.-|.+|+..|-.++|||.. ..|++|+
T Consensus 204 l~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS------ 277 (440)
T KOG0302|consen 204 LFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCS------ 277 (440)
T ss_pred eEEecccCccceeeecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeee------
Confidence 56899999999999999932 2588998889999999887642 23356799999999999964 4666776
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCC---eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCC-
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR---KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS- 152 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~---~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~- 152 (641)
-||+|+|||++.+ .++.+ +.|.+-|+.+.|+...++|++|++||+++|||+++
T Consensus 278 ----------------------~DgsIrIWDiRs~~~~~~~~~-kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~ 334 (440)
T KOG0302|consen 278 ----------------------CDGSIRIWDIRSGPKKAAVST-KAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQF 334 (440)
T ss_pred ----------------------cCceEEEEEecCCCccceeEe-eccCCceeeEEccCCcceeeecCCCceEEEEEhhhc
Confidence 9999999999988 34444 88999999999999999999999999999999975
Q ss_pred --CeeEEEEccCCCCEEEEEEecC-CCEEEEEeCCCeEEEEecCCC
Q psy9327 153 --RNCICVLTGHNHYVMCAQFHPT-DDIVVSASLDQTIRVWDISGL 195 (641)
Q Consensus 153 --~~~i~~l~~h~~~V~sl~fsp~-g~~lvSgs~DgtI~IWD~~~~ 195 (641)
++++.+|+-|.++|+++.|||. ...|++++.|..|.+||+..-
T Consensus 335 ~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE 380 (440)
T KOG0302|consen 335 KSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVE 380 (440)
T ss_pred cCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeecc
Confidence 5688999999999999999995 567888889999999999753
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-18 Score=173.46 Aligned_cols=201 Identities=19% Similarity=0.295 Sum_probs=158.7
Q ss_pred ccCCCCeEEEEEccCC--CeEEEEeCCCcEEEEECcc----------------CcccccccccccCeEEEEEeCC-CCEE
Q psy9327 6 ETKSARVKGLSFHPKR--PWILSSLHNGVIQLWDYRM----------------NTLLEKFDEHEGPVRGICFHNQ-QPIF 66 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg--~~Lasg~~dg~I~iWD~~~----------------~~~l~~~~~h~~~V~~i~fsp~-~~~l 66 (641)
-.|.+.++.+..++-+ .+.++=+..|.|+|||+.. .+++.++.+|.+.=.+++|||- ...+
T Consensus 148 i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~L 227 (440)
T KOG0302|consen 148 IPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRL 227 (440)
T ss_pred cccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccccccc
Confidence 3677888888888755 4566667789999999841 2456778889998899999993 2346
Q ss_pred EEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeE---EEEccCCCCeEEEEEccC-CCEEEEEeCC
Q psy9327 67 VSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCI---FTLLGHLDYIRTTFFHHE-YPWILSASDD 142 (641)
Q Consensus 67 ~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~---~~~~~h~~~V~~v~fsp~-~~~l~sgs~D 142 (641)
++|. --+.|++|...+|... ..|.+|+..|-.++|+|. ...|+|||.|
T Consensus 228 lsGD----------------------------c~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~D 279 (440)
T KOG0302|consen 228 LSGD----------------------------CVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCD 279 (440)
T ss_pred ccCc----------------------------cccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecC
Confidence 7776 6778999999888653 346789999999999995 4589999999
Q ss_pred CeEEEEECCCC---eeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCcee
Q psy9327 143 QTIRIWYWQSR---NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWK 219 (641)
Q Consensus 143 g~I~vWd~~~~---~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~ 219 (641)
++|+|||++++ .|+.+ ++|.+.|+.+.|+....+|+||++||+++|||++..+.-
T Consensus 280 gsIrIWDiRs~~~~~~~~~-kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~--------------------- 337 (440)
T KOG0302|consen 280 GSIRIWDIRSGPKKAAVST-KAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSG--------------------- 337 (440)
T ss_pred ceEEEEEecCCCccceeEe-eccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCC---------------------
Confidence 99999999988 46655 899999999999998889999999999999999874321
Q ss_pred eeeeeeeeCCCeeEEEecCCCcceeee-cCCcceEEEEEcCC-ccEEEEecCCeEEEEEc
Q psy9327 220 YCKPVKYCNPKHTLHICNRKMEPLCNI-HENTRVKSGAWDES-GVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 220 ~~~~l~s~~~d~~I~i~d~~~~~~~~~-~~~~~I~sla~~p~-g~~L~t~s~~~k~~l~~ 277 (641)
.+++.+ .|..+|+++.|+|. ...++.++.|..+.+|+
T Consensus 338 ---------------------~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWD 376 (440)
T KOG0302|consen 338 ---------------------QPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWD 376 (440)
T ss_pred ---------------------CcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEE
Confidence 122222 35789999999987 34566666777777775
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-18 Score=164.51 Aligned_cols=203 Identities=15% Similarity=0.265 Sum_probs=156.8
Q ss_pred CceeeccCCCCeEEEEEcc--CCCeEEEEeCCCcEEEEECccCc--ccccccccccCeEEEEEeCC--CCEEEEeceeeE
Q psy9327 1 MLTKFETKSARVKGLSFHP--KRPWILSSLHNGVIQLWDYRMNT--LLEKFDEHEGPVRGICFHNQ--QPIFVSGGKMIV 74 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fsp--dg~~Lasg~~dg~I~iWD~~~~~--~l~~~~~h~~~V~~i~fsp~--~~~l~sgs~~~~ 74 (641)
++.+|.||+++|.-++|.. -|.+||+++.||.|.||....|+ ....+..|++.|++++|.|. |..|++++
T Consensus 48 ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~Lacas---- 123 (299)
T KOG1332|consen 48 LLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACAS---- 123 (299)
T ss_pred eeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEee----
Confidence 4678999999999999976 79999999999999999988774 34445679999999999985 56777776
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC---eeEEEEccCCCCeEEEEEccC---C-----------CEEE
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR---KCIFTLLGHLDYIRTTFFHHE---Y-----------PWIL 137 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~---~~~~~~~~h~~~V~~v~fsp~---~-----------~~l~ 137 (641)
.||.|.|.++++. ........|.-.|++++|.|- | ..|+
T Consensus 124 ------------------------SDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlv 179 (299)
T KOG1332|consen 124 ------------------------SDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLV 179 (299)
T ss_pred ------------------------CCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceee
Confidence 9999999998764 223445679999999999985 4 4699
Q ss_pred EEeCCCeEEEEECCCCe--eEEEEccCCCCEEEEEEecCC----CEEEEEeCCCeEEEEecCCCce--eeeccCCCceee
Q psy9327 138 SASDDQTIRIWYWQSRN--CICVLTGHNHYVMCAQFHPTD----DIVVSASLDQTIRVWDISGLRK--KNVAPGMGKLVL 209 (641)
Q Consensus 138 sgs~Dg~I~vWd~~~~~--~i~~l~~h~~~V~sl~fsp~g----~~lvSgs~DgtI~IWD~~~~~~--~~~~~~~~~~v~ 209 (641)
||+.|..|+||+..+++ .-.+|.+|.+.|+.++|.|.- ..|+|+|.||++.||..+.... ..++.
T Consensus 180 SgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll------- 252 (299)
T KOG1332|consen 180 SGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLL------- 252 (299)
T ss_pred ccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCccccccc-------
Confidence 99999999999998864 234589999999999999963 5799999999999998763211 11111
Q ss_pred ecccCCCceeeeee-----eeeeCCCeeEEEecCC
Q psy9327 210 SMKSKHPIWKYCKP-----VKYCNPKHTLHICNRK 239 (641)
Q Consensus 210 s~~~~~~v~~~~~~-----l~s~~~d~~I~i~d~~ 239 (641)
. ....++|.++.+ ++.+..|+.+.+|-.+
T Consensus 253 ~-~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~ 286 (299)
T KOG1332|consen 253 E-EFPDVVWRVSWSLSGNILAVSGGDNKVTLWKEN 286 (299)
T ss_pred c-cCCcceEEEEEeccccEEEEecCCcEEEEEEeC
Confidence 0 123345555444 4445577788888644
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-18 Score=187.06 Aligned_cols=197 Identities=20% Similarity=0.309 Sum_probs=175.4
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccc---cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF---DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~---~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
-...+++++.++-|++.+.|...|+|-+|++++|-...+| ..|+++|++++...-++.+++++
T Consensus 447 ~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~-------------- 512 (910)
T KOG1539|consen 447 DDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAG-------------- 512 (910)
T ss_pred cCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEcc--------------
Confidence 3467999999999999999999999999999999888888 58999999999999899999998
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCC
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNH 164 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~ 164 (641)
.+|-+++||.+.+.++..+. -...+.++..|.....++.+.+|-.|+++|..+++..+.|.||.+
T Consensus 513 --------------~~Gilkfw~f~~k~l~~~l~-l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~n 577 (910)
T KOG1539|consen 513 --------------ADGILKFWDFKKKVLKKSLR-LGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGN 577 (910)
T ss_pred --------------CcceEEEEecCCcceeeeec-cCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhcccc
Confidence 99999999999998887776 345677888999999999999999999999999999999999999
Q ss_pred CEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCccee
Q psy9327 165 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLC 244 (641)
Q Consensus 165 ~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~ 244 (641)
.|+.++|||||+||++++.|++||+||+-++..+-.+.
T Consensus 578 ritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~------------------------------------------ 615 (910)
T KOG1539|consen 578 RITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL------------------------------------------ 615 (910)
T ss_pred ceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe------------------------------------------
Confidence 99999999999999999999999999998866544332
Q ss_pred eecCCcceEEEEEcCCccEEEEecCC-eEEEEEcC
Q psy9327 245 NIHENTRVKSGAWDESGVFIYTTSNH-IKYAIVNG 278 (641)
Q Consensus 245 ~~~~~~~I~sla~~p~g~~L~t~s~~-~k~~l~~~ 278 (641)
-..+++++.|+|+|.+|+|+..+ .-+++|.-
T Consensus 616 ---vd~~~~sls~SPngD~LAT~Hvd~~gIylWsN 647 (910)
T KOG1539|consen 616 ---VDSPCTSLSFSPNGDFLATVHVDQNGIYLWSN 647 (910)
T ss_pred ---cCCcceeeEECCCCCEEEEEEecCceEEEEEc
Confidence 25678889999999999999855 56777753
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.3e-18 Score=171.43 Aligned_cols=272 Identities=11% Similarity=0.175 Sum_probs=208.6
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECcc--CcccccccccccCeEEEEEeCCCC-EEEEeceeeEEeeeceeeecc
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRM--NTLLEKFDEHEGPVRGICFHNQQP-IFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~--~~~l~~~~~h~~~V~~i~fsp~~~-~l~sgs~~~~~~~~~~~~~~~ 85 (641)
.++|+++.|||..+++++|+.||+++||.++. ...+..+.-...||.+.+|+|+|. .+++++
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~--------------- 277 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSG--------------- 277 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecc---------------
Confidence 47899999999999999999999999998753 345566656678999999999999 777776
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEE--EEccCC-CCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIF--TLLGHL-DYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~--~~~~h~-~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h 162 (641)
...-.+.||+.+++... ...++. ..+.....+|++++|+.+|..|.|.+-...+++.+.+++ -
T Consensus 278 -------------rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K-i 343 (514)
T KOG2055|consen 278 -------------RRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-I 343 (514)
T ss_pred -------------cceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheee-e
Confidence 78889999999886432 334443 356777889999999999999999999999999998887 6
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCce---eeecccCCCceeeeeeeeeeCCCeeEEEecCC
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKL---VLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK 239 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~---v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~ 239 (641)
.+.|..++|+.++..|++++.+|.|.+||++...+.+.+...|.. -.|.+ -++- -+++|+..|.|.|||.+
T Consensus 344 eG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S-~ng~-----ylA~GS~~GiVNIYd~~ 417 (514)
T KOG2055|consen 344 EGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCIS-LNGS-----YLATGSDSGIVNIYDGN 417 (514)
T ss_pred ccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeec-CCCc-----eEEeccCcceEEEeccc
Confidence 788999999999999999999999999999999888877643211 11111 1111 27889999999999933
Q ss_pred -------CcceeeecC-CcceEEEEEcCCccEEEEecC--CeEEEEEcCCCCeE-eccccc--------eEEEEEcCcEE
Q psy9327 240 -------MEPLCNIHE-NTRVKSGAWDESGVFIYTTSN--HIKYAIVNGDHGII-RTLDLP--------IYITKIKGNQV 300 (641)
Q Consensus 240 -------~~~~~~~~~-~~~I~sla~~p~g~~L~t~s~--~~k~~l~~~~~g~I-~~~d~p--------~~~~~~~g~~v 300 (641)
..++..+.. ...|+++.|++++..|+.+|. ...+.+.+.-+.++ .-|..+ ...+...+..+
T Consensus 418 s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~l 497 (514)
T KOG2055|consen 418 SCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYL 497 (514)
T ss_pred hhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceE
Confidence 345555554 778999999999999998884 22333333222222 122211 23355678899
Q ss_pred EEEeCCCCeEEEEeC
Q psy9327 301 YYLDRECSPHVLRID 315 (641)
Q Consensus 301 ~~~~~dg~i~v~~~~ 315 (641)
..+...|++.+|.+.
T Consensus 498 AvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 498 AVGNEAGRVHLFKLH 512 (514)
T ss_pred EeecCCCceeeEeec
Confidence 999999999999875
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.6e-18 Score=173.76 Aligned_cols=264 Identities=13% Similarity=0.146 Sum_probs=195.6
Q ss_pred CcEEEEECccCccccccccc-ccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC
Q psy9327 31 GVIQLWDYRMNTLLEKFDEH-EGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK 109 (641)
Q Consensus 31 g~I~iWD~~~~~~l~~~~~h-~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~ 109 (641)
..+.+||+++|..+.+|++. ...-.++..- .+.+++++. ..-..+.+|.+.
T Consensus 18 ~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l-~~~yllsaq---------------------------~~rp~l~vw~i~ 69 (476)
T KOG0646|consen 18 INCIVWDLRTGTSLLQYKGSYLAQAASLTAL-NNEYLLSAQ---------------------------LKRPLLHVWEIL 69 (476)
T ss_pred cceeEEecCCCceeEEecCcccccchhhhhh-chhheeeec---------------------------ccCccccccccC
Confidence 55999999999998888764 2222222211 235677775 256689999987
Q ss_pred CCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEE
Q psy9327 110 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 189 (641)
Q Consensus 110 t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~I 189 (641)
.........--.++|.+++-+|+|.+++.|+..+.+++|.+.+|..+..+.+|-..|+|+.|+-||..++|||.||.|.+
T Consensus 70 k~~~~~q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~v 149 (476)
T KOG0646|consen 70 KKDQVVQYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLV 149 (476)
T ss_pred chhhhhhhcccccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEE
Confidence 65444433335688999999999999999989999999999999999999999999999999999999999999999999
Q ss_pred EecCC---------CceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeecCCcceEEEEEcC
Q psy9327 190 WDISG---------LRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIHENTRVKSGAWDE 259 (641)
Q Consensus 190 WD~~~---------~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p 259 (641)
|++.. -+..+.+.+|.-.|..+.....- ...-+.+++.|+++++|| ..+..+.++.-...+.+++.||
T Consensus 150 W~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg--~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDp 227 (476)
T KOG0646|consen 150 WLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGG--TNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDP 227 (476)
T ss_pred EEEEeecccccCCCccceeeeccCcceeEEEEecCCC--ccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEcc
Confidence 98743 23334444454444433322110 112277889999999999 6677888888899999999999
Q ss_pred CccEEEEecCCeEEEEEcCC-----CC------------eEecc-------ccceEEEEEcCcEEEEEeCCCCeEEEEeC
Q psy9327 260 SGVFIYTTSNHIKYAIVNGD-----HG------------IIRTL-------DLPIYITKIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 260 ~g~~L~t~s~~~k~~l~~~~-----~g------------~I~~~-------d~p~~~~~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
.+..++.|+.+|++++.+.. .. .++.+ ..+.-....+|..+++++.||.+++|++.
T Consensus 228 ae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~ 307 (476)
T KOG0646|consen 228 AERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIY 307 (476)
T ss_pred cccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecc
Confidence 99999999999999864321 11 12211 11133355789999999999999999998
Q ss_pred CcchhhhHH
Q psy9327 316 PTEFKFKLA 324 (641)
Q Consensus 316 ~~~~~~k~~ 324 (641)
+......+.
T Consensus 308 S~Q~iRtl~ 316 (476)
T KOG0646|consen 308 SKQCIRTLQ 316 (476)
T ss_pred hHHHHHHHh
Confidence 755544443
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-16 Score=164.44 Aligned_cols=267 Identities=12% Similarity=0.063 Sum_probs=186.2
Q ss_pred CCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEE-EeceeeEEeeeceeeecccCCcceeeEEEeeC
Q psy9327 21 RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFV-SGGKMIVMAYQGCILESRNEPCLFRIKSVLGD 99 (641)
Q Consensus 21 g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~-sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 99 (641)
+..+++++.||.|++||..+++.+..+..+.. +.+++|+|++..++ +++ .
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~-~~~l~~~~dg~~l~~~~~----------------------------~ 51 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTRTFPVGQR-PRGITLSKDGKLLYVCAS----------------------------D 51 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEEEEECCCC-CCceEECCCCCEEEEEEC----------------------------C
Confidence 35788999999999999999988888876544 67899999999774 554 7
Q ss_pred CCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEE-EeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEE
Q psy9327 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILS-ASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIV 178 (641)
Q Consensus 100 Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~s-gs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~l 178 (641)
++.|++||..+++....+..+.+ +..++|+|+++.+++ ++.|+.+++||+++++.+..+.. ...+.+++|+|++.++
T Consensus 52 ~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l 129 (300)
T TIGR03866 52 SDTIQVIDLATGEVIGTLPSGPD-PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPV-GVEPEGMAVSPDGKIV 129 (300)
T ss_pred CCeEEEEECCCCcEEEeccCCCC-ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeC-CCCcceEEECCCCCEE
Confidence 89999999999988887766544 467899999986654 56789999999999888877763 3456889999999999
Q ss_pred EEEeCCC-eEEEEecCCCceeeeccCCCce-eeecccCCCceeeeeeeeeeCCCeeEEEecC-CCcceeeecC-------
Q psy9327 179 VSASLDQ-TIRVWDISGLRKKNVAPGMGKL-VLSMKSKHPIWKYCKPVKYCNPKHTLHICNR-KMEPLCNIHE------- 248 (641)
Q Consensus 179 vSgs~Dg-tI~IWD~~~~~~~~~~~~~~~~-v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~-~~~~~~~~~~------- 248 (641)
++++.++ .+.+||..+++........... ..+....... -+.++..++.+.+||. +.+.+..+..
T Consensus 130 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~-----l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~ 204 (300)
T TIGR03866 130 VNTSETTNMAHFIDTKTYEIVDNVLVDQRPRFAEFTADGKE-----LWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHP 204 (300)
T ss_pred EEEecCCCeEEEEeCCCCeEEEEEEcCCCccEEEECCCCCE-----EEEEcCCCCEEEEEEcCcceeeeeeeeccccccc
Confidence 9988875 5778899887665433211111 0111111100 0234456889999994 3443333321
Q ss_pred -CcceEEEEEcCCccEEEEe-cCCeEEEEEcCCCCeEec-c--ccce--EEEEEcCcEEEEEe-CCCCeEEEEeCCcchh
Q psy9327 249 -NTRVKSGAWDESGVFIYTT-SNHIKYAIVNGDHGIIRT-L--DLPI--YITKIKGNQVYYLD-RECSPHVLRIDPTEFK 320 (641)
Q Consensus 249 -~~~I~sla~~p~g~~L~t~-s~~~k~~l~~~~~g~I~~-~--d~p~--~~~~~~g~~v~~~~-~dg~i~v~~~~~~~~~ 320 (641)
......++|+|+|.+++.+ ..+..+.+|+.+++.+.. + ..++ ..+..++..+++.+ .++.+.+|+..+.+..
T Consensus 205 ~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~ 284 (300)
T TIGR03866 205 EAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLLVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVI 284 (300)
T ss_pred ccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEeCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEE
Confidence 1123468899999986654 456678899887766432 2 1111 12456788888764 5899999999987654
Q ss_pred hhH
Q psy9327 321 FKL 323 (641)
Q Consensus 321 ~k~ 323 (641)
-..
T Consensus 285 ~~~ 287 (300)
T TIGR03866 285 KSI 287 (300)
T ss_pred EEE
Confidence 443
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.1e-18 Score=175.98 Aligned_cols=302 Identities=15% Similarity=0.255 Sum_probs=214.7
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCC--EEEEeceeeEEeeecee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP--IFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~--~l~sgs~~~~~~~~~~~ 81 (641)
.|.||++.|.||+.+|.|.+|++|+.||+|+||.+.+|.+++++. ..+.|.||+|+|.+. .|+++-.......+- +
T Consensus 395 vyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp-~ 472 (733)
T KOG0650|consen 395 VYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECVLIVNP-I 472 (733)
T ss_pred eEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEecCceEEeCc-c
Confidence 578999999999999999999999999999999999999999884 667999999999765 344442111111100 0
Q ss_pred eecccCC-cceeeEEE----eeCCCeEEEEECCCC----eeEEEEccCCCCeEEEEEccCCCEEEEEeCC---CeEEEEE
Q psy9327 82 LESRNEP-CLFRIKSV----LGDDYKIKVWNYKQR----KCIFTLLGHLDYIRTTFFHHEYPWILSASDD---QTIRIWY 149 (641)
Q Consensus 82 ~~~~~~~-~~~~~~~~----~s~Dg~I~vWD~~t~----~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D---g~I~vWd 149 (641)
+--..+. .....++. ...++.+..|.-... +-++..-.|...|+.+.||..|.+|++..-| ..|.|++
T Consensus 473 ~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQ 552 (733)
T KOG0650|consen 473 FGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQ 552 (733)
T ss_pred ccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEe
Confidence 0000000 01111111 235678888975421 1234445599999999999999999987654 5799999
Q ss_pred CCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCC
Q psy9327 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNP 229 (641)
Q Consensus 150 ~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~ 229 (641)
+..++....|....+.|.++.|||....++.++. ..|||||+..+.....+....+.+.+|+. ||-- -.+..++.
T Consensus 553 LSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~tg~kwiS~msi-hp~G---Dnli~gs~ 627 (733)
T KOG0650|consen 553 LSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLTGSKWISSMSI-HPNG---DNLILGSY 627 (733)
T ss_pred cccccccCchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHHHHHHhcCCeeeeeeee-cCCC---CeEEEecC
Confidence 9888777777767788999999999999988886 48999999988777777655566665442 2211 11556678
Q ss_pred CeeEEEecCCC--cceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCC--Ce-----Ee---cc-------ccc
Q psy9327 230 KHTLHICNRKM--EPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH--GI-----IR---TL-------DLP 289 (641)
Q Consensus 230 d~~I~i~d~~~--~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~--g~-----I~---~~-------d~p 289 (641)
++.+..+|... .+...+. +...+.+++|++.-..+++++.|+.++++.+.- .. |. .+ ++-
T Consensus 628 d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~g 707 (733)
T KOG0650|consen 628 DKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLG 707 (733)
T ss_pred CCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccc
Confidence 88888888443 4555554 577899999999999999999999999876531 11 11 11 000
Q ss_pred --eEEEEEcCcEEEEEeCCCCeEEE
Q psy9327 290 --IYITKIKGNQVYYLDRECSPHVL 312 (641)
Q Consensus 290 --~~~~~~~g~~v~~~~~dg~i~v~ 312 (641)
-.+||.....+++.+.||++++|
T Consensus 708 VLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 708 VLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred eEeecccCCCceEEecCCCceEEee
Confidence 12367778889999999999988
|
|
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-17 Score=178.90 Aligned_cols=261 Identities=24% Similarity=0.384 Sum_probs=161.8
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
.+-...-....++++|+|++++++ .||.-.|+....... ...+.-...+|++++. +|+-.
T Consensus 27 ~lg~~~~~p~~ls~npngr~v~V~-g~geY~iyt~~~~r~-----k~~G~g~~~vw~~~n~-yAv~~------------- 86 (443)
T PF04053_consen 27 ELGSCEIYPQSLSHNPNGRFVLVC-GDGEYEIYTALAWRN-----KAFGSGLSFVWSSRNR-YAVLE------------- 86 (443)
T ss_dssp EEEE-SS--SEEEE-TTSSEEEEE-ETTEEEEEETTTTEE-----EEEEE-SEEEE-TSSE-EEEE--------------
T ss_pred cCCCCCcCCeeEEECCCCCEEEEE-cCCEEEEEEccCCcc-----cccCceeEEEEecCcc-EEEEE-------------
Confidence 334445567899999999998885 467888887322211 2335556788998554 56654
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCC
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~ 163 (641)
.+++|.++.--..+....+... ..+..+.. |.+|...+.+ .|.+||+.+++.+..+.-.
T Consensus 87 ---------------~~~~I~I~kn~~~~~~k~i~~~-~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~- 145 (443)
T PF04053_consen 87 ---------------SSSTIKIYKNFKNEVVKSIKLP-FSVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRRIDVS- 145 (443)
T ss_dssp ---------------TTS-EEEEETTEE-TT-----S-S-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS--
T ss_pred ---------------CCCeEEEEEcCccccceEEcCC-cccceEEc---CcEEEEECCC-CEEEEEhhHcceeeEEecC-
Confidence 5788999632222222233221 13444433 7777777655 8999999999999998733
Q ss_pred CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcce
Q psy9327 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPL 243 (641)
Q Consensus 164 ~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~ 243 (641)
.|..+.|+++|.+++-.+.| ++.|++........ .+ .+| -...+
T Consensus 146 -~vk~V~Ws~~g~~val~t~~-~i~il~~~~~~~~~-~~--------------------------~~g-------~e~~f 189 (443)
T PF04053_consen 146 -AVKYVIWSDDGELVALVTKD-SIYILKYNLEAVAA-IP--------------------------EEG-------VEDAF 189 (443)
T ss_dssp -E-EEEEE-TTSSEEEEE-S--SEEEEEE-HHHHHH-BT--------------------------TTB--------GGGE
T ss_pred -CCcEEEEECCCCEEEEEeCC-eEEEEEecchhccc-cc--------------------------ccC-------chhce
Confidence 48999999999999988866 77777654311100 00 011 12245
Q ss_pred eeecC-CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEeccccceEEEEEcC--cEEEEEeCCCCeEEEEeCCcchh
Q psy9327 244 CNIHE-NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLPIYITKIKG--NQVYYLDRECSPHVLRIDPTEFK 320 (641)
Q Consensus 244 ~~~~~-~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~p~~~~~~~g--~~v~~~~~dg~i~v~~~~~~~~~ 320 (641)
..+++ ..+|.+++|+.+ .+++|+.++.+| +.+|+.++|+.+|.|+|+....+ ++++++++|+.+..+.++..++.
T Consensus 190 ~~~~E~~~~IkSg~W~~d-~fiYtT~~~lkY-l~~Ge~~~i~~ld~~~yllgy~~~~~~ly~~Dr~~~v~~~~ld~~~~~ 267 (443)
T PF04053_consen 190 ELIHEISERIKSGCWVED-CFIYTTSNHLKY-LVNGETGIIAHLDKPLYLLGYLPKENRLYLIDRDGNVISYELDLSELE 267 (443)
T ss_dssp EEEEEE-S--SEEEEETT-EEEEE-TTEEEE-EETTEEEEEEE-SS--EEEEEETTTTEEEEE-TT--EEEEE--HHHHH
T ss_pred EEEEEecceeEEEEEEcC-EEEEEcCCeEEE-EEcCCcceEEEcCCceEEEEEEccCCEEEEEECCCCEEEEEECHHHHH
Confidence 55666 889999999998 999999999999 88999999999999999999888 99999999999999999999999
Q ss_pred hhHHHhccchHHHHHHHhcCccc
Q psy9327 321 FKLALINHKYEEVLHIVRNSRLV 343 (641)
Q Consensus 321 ~k~~l~~~~~~~~l~~~~~s~l~ 343 (641)
|+.++.+++|+++++++++++++
T Consensus 268 fk~av~~~d~~~v~~~i~~~~ll 290 (443)
T PF04053_consen 268 FKTAVLRGDFEEVLRMIAASNLL 290 (443)
T ss_dssp HHHHHHTT-HHH-----HHHHTG
T ss_pred HHHHHHcCChhhhhhhhhhhhhc
Confidence 99999999999999999988888
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-17 Score=161.99 Aligned_cols=233 Identities=14% Similarity=0.182 Sum_probs=175.9
Q ss_pred ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC-CeeEE-EEccCCCCeEE
Q psy9327 49 EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ-RKCIF-TLLGHLDYIRT 126 (641)
Q Consensus 49 ~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t-~~~~~-~~~~h~~~V~~ 126 (641)
..+..|.+|+|||....+++++ |.|++|++|+++. |.... ....|.++|.+
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~---------------------------SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~ 77 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAG---------------------------SWDGTVRIWEVQNSGQLVPKAQQSHDGPVLD 77 (347)
T ss_pred CcccchheeEeccccCceEEec---------------------------ccCCceEEEEEecCCcccchhhhccCCCeEE
Confidence 4667899999999655555444 4999999999987 44433 34569999999
Q ss_pred EEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCC--EEEEEeCCCeEEEEecCCCceeeeccCC
Q psy9327 127 TFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD--IVVSASLDQTIRVWDISGLRKKNVAPGM 204 (641)
Q Consensus 127 v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~--~lvSgs~DgtI~IWD~~~~~~~~~~~~~ 204 (641)
++|+.+|..+++|+.|+.+++||+.+++ ...+-.|.++|.++.|-+... .|++||.|.+++.||.+....+.++. .
T Consensus 78 v~WsddgskVf~g~~Dk~~k~wDL~S~Q-~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~-L 155 (347)
T KOG0647|consen 78 VCWSDDGSKVFSGGCDKQAKLWDLASGQ-VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ-L 155 (347)
T ss_pred EEEccCCceEEeeccCCceEEEEccCCC-eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeee-c
Confidence 9999999999999999999999999995 556677999999999988654 89999999999999999888777665 3
Q ss_pred CceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcc--eeeec--CCcceEEEEEcCCccEEEEecCCeEEEEEcCCC
Q psy9327 205 GKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEP--LCNIH--ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 205 ~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~--~~~~~--~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~ 280 (641)
...++++...+|+. +.+..+..|.+++....+ .+... -.-.+.+++...++...+.|+-.|++.+...++
T Consensus 156 PeRvYa~Dv~~pm~------vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~ 229 (347)
T KOG0647|consen 156 PERVYAADVLYPMA------VVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDD 229 (347)
T ss_pred cceeeehhccCcee------EEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCC
Confidence 46677777777753 334468888899843221 12211 144567777777766668899899988876665
Q ss_pred C------eEecccc------ceEE-----EEEcCcEEEEEeCCCCeEEEEeCC
Q psy9327 281 G------IIRTLDL------PIYI-----TKIKGNQVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 281 g------~I~~~d~------p~~~-----~~~~g~~v~~~~~dg~i~v~~~~~ 316 (641)
+ +.++-.. -+|. ++...+.+++...||+...|+-+.
T Consensus 230 ~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkda 282 (347)
T KOG0647|consen 230 PNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDA 282 (347)
T ss_pred CCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchh
Confidence 4 3333321 1333 556678899999999999998774
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.5e-17 Score=178.27 Aligned_cols=293 Identities=15% Similarity=0.271 Sum_probs=224.7
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
++.+|+++.++|+++.=+|-=..+|.|..+|+|.|++++.++.+.+|+...++|++++|..||+.+++.+
T Consensus 194 ~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~---------- 263 (910)
T KOG1539|consen 194 VVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASG---------- 263 (910)
T ss_pred EEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEec----------
Confidence 4789999999999999999999999999999999999999999999975569999999999988665555
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc-cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC----ee
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL-GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR----NC 155 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~-~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~----~~ 155 (641)
...|.+.+||++..+.+.... .|.+.|....|-|..+.+++++.|...++|=..++ +.
T Consensus 264 -----------------~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~ 326 (910)
T KOG1539|consen 264 -----------------RSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRL 326 (910)
T ss_pred -----------------cCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchh
Confidence 278999999999988887766 79999999999999999999999999999866543 45
Q ss_pred EEEEccCCCCEEEEEEe-cCCCEEEEEeCCCeEEEEecCCCceeeeccC---------CC---------ceeeecccCCC
Q psy9327 156 ICVLTGHNHYVMCAQFH-PTDDIVVSASLDQTIRVWDISGLRKKNVAPG---------MG---------KLVLSMKSKHP 216 (641)
Q Consensus 156 i~~l~~h~~~V~sl~fs-p~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~---------~~---------~~v~s~~~~~~ 216 (641)
++.-.||..+..|+.|. .+|..+.+++.|++.+.+++.....-+.+.. .+ ..+..++....
T Consensus 327 LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~ 406 (910)
T KOG1539|consen 327 LRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENA 406 (910)
T ss_pred eeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccc
Confidence 56667999999999999 5789999999999999998743211111100 00 11111110000
Q ss_pred -------------------cee-----------------------------eeee-eeeeCCCeeEEEec-CCCcceeee
Q psy9327 217 -------------------IWK-----------------------------YCKP-VKYCNPKHTLHICN-RKMEPLCNI 246 (641)
Q Consensus 217 -------------------v~~-----------------------------~~~~-l~s~~~d~~I~i~d-~~~~~~~~~ 246 (641)
.|. .|+. ...|.+.|.|.+++ .++....++
T Consensus 407 RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf 486 (910)
T KOG1539|consen 407 REKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSF 486 (910)
T ss_pred hhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeeccc
Confidence 010 0111 33456899999999 555555555
Q ss_pred ----cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eeccccc--------------------------------
Q psy9327 247 ----HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDLP-------------------------------- 289 (641)
Q Consensus 247 ----~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~p-------------------------------- 289 (641)
.+..+|+.++.|..++.+++++.+|.+..|+-..+. +..|++.
T Consensus 487 ~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~ 566 (910)
T KOG1539|consen 487 GDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTR 566 (910)
T ss_pred ccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhh
Confidence 468899999999999999999999999998866554 2222221
Q ss_pred --------------eEEEEEcCcEEEEEeCCCCeEEEEeCCcchh
Q psy9327 290 --------------IYITKIKGNQVYYLDRECSPHVLRIDPTEFK 320 (641)
Q Consensus 290 --------------~~~~~~~g~~v~~~~~dg~i~v~~~~~~~~~ 320 (641)
-+.+..+|..+++++-|++|++|++.++...
T Consensus 567 kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lI 611 (910)
T KOG1539|consen 567 KVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLI 611 (910)
T ss_pred hhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCccee
Confidence 2235578999999999999999999877654
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.1e-18 Score=176.73 Aligned_cols=234 Identities=15% Similarity=0.184 Sum_probs=192.2
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc--ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD--EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~--~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
..+.|.++..+|||+-|++|+.-.++.|||+......-+.+ ...-...+++.+||.+..+++.
T Consensus 464 rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFscc--------------- 528 (705)
T KOG0639|consen 464 RDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCC--------------- 528 (705)
T ss_pred cccceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeec---------------
Confidence 45678999999999999999999999999998765543333 2334567789999999998888
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY 165 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~ 165 (641)
.||.|.|||+.+...+..|++|.+.+.|+..+++|..|-+|+-|.+|+.||+++++.+.... ....
T Consensus 529 -------------sdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhd-F~SQ 594 (705)
T KOG0639|consen 529 -------------SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHD-FSSQ 594 (705)
T ss_pred -------------cCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhh-hhhh
Confidence 89999999999999999999999999999999999999999999999999999987665433 4577
Q ss_pred EEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCC-CceeeeeeeeeeCCCeeEEEec-CCCcce
Q psy9327 166 VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKH-PIWKYCKPVKYCNPKHTLHICN-RKMEPL 243 (641)
Q Consensus 166 V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~-~v~~~~~~l~s~~~d~~I~i~d-~~~~~~ 243 (641)
|.++..+|++.|++.|-..+.+-+-..+..+ +..+.-|...|+++...+ ..| +++.+.|+.+..|. --+..+
T Consensus 595 IfSLg~cP~~dWlavGMens~vevlh~skp~-kyqlhlheScVLSlKFa~cGkw-----fvStGkDnlLnawrtPyGasi 668 (705)
T KOG0639|consen 595 IFSLGYCPTGDWLAVGMENSNVEVLHTSKPE-KYQLHLHESCVLSLKFAYCGKW-----FVSTGKDNLLNAWRTPYGASI 668 (705)
T ss_pred heecccCCCccceeeecccCcEEEEecCCcc-ceeecccccEEEEEEecccCce-----eeecCchhhhhhccCccccce
Confidence 9999999999999999999988877765543 344555677888765332 122 45566888999998 446777
Q ss_pred eeecCCcceEEEEEcCCccEEEEecCCeEEEEE
Q psy9327 244 CNIHENTRVKSGAWDESGVFIYTTSNHIKYAIV 276 (641)
Q Consensus 244 ~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~ 276 (641)
....+...|.++..+.+.++++|||.+.+--++
T Consensus 669 FqskE~SsVlsCDIS~ddkyIVTGSGdkkATVY 701 (705)
T KOG0639|consen 669 FQSKESSSVLSCDISFDDKYIVTGSGDKKATVY 701 (705)
T ss_pred eeccccCcceeeeeccCceEEEecCCCcceEEE
Confidence 788889999999999999999999987665444
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.9e-18 Score=166.54 Aligned_cols=238 Identities=14% Similarity=0.198 Sum_probs=190.8
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+..|+.|.+.|.+|+++. ..++++|.|.+|+.|.+.- ..+.++. ..+.+.+|.-+..+..++++|
T Consensus 102 ~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~-~p~~til-g~s~~~gIdh~~~~~~FaTcG----------- 166 (433)
T KOG0268|consen 102 IRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDG-PPLHTIL-GKSVYLGIDHHRKNSVFATCG----------- 166 (433)
T ss_pred hheeecccCceeeEEecc--cceEEecCCcceeeeeccC-Ccceeee-ccccccccccccccccccccC-----------
Confidence 568999999999999987 5689999999999999764 4666663 456677888888888889987
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeeEEEEc
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~~i~~l~ 160 (641)
..|.|||.+...++..+.--.+.|.++.|+|... .|++|+.|+.|.+||.++..++....
T Consensus 167 -------------------e~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi 227 (433)
T KOG0268|consen 167 -------------------EQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVI 227 (433)
T ss_pred -------------------ceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceee
Confidence 3599999999999999998899999999999654 67788899999999999998876654
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce-eeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC
Q psy9327 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK-KNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK 239 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~-~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~ 239 (641)
-...-..++|+|++..+++|+.|..+..+|++..+. .....+|...|+++... |. ...+++|+.|.+|+||.-+
T Consensus 228 -~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfs-pt---G~EfvsgsyDksIRIf~~~ 302 (433)
T KOG0268|consen 228 -LTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFS-PT---GQEFVSGSYDKSIRIFPVN 302 (433)
T ss_pred -eeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccC-CC---cchhccccccceEEEeecC
Confidence 344567899999889999999999999999998654 44556677777764422 11 1127889999999999954
Q ss_pred CcceeeecC---CcceEEEEEcCCccEEEEecCCeEEEEEcC
Q psy9327 240 MEPLCNIHE---NTRVKSGAWDESGVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 240 ~~~~~~~~~---~~~I~sla~~p~g~~L~t~s~~~k~~l~~~ 278 (641)
...-..+.+ -..|.++.|+-|..++++||+++.+.+|.+
T Consensus 303 ~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka 344 (433)
T KOG0268|consen 303 HGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKA 344 (433)
T ss_pred CCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeec
Confidence 433333333 457899999999999999999999999875
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.7e-18 Score=175.76 Aligned_cols=200 Identities=19% Similarity=0.256 Sum_probs=150.3
Q ss_pred eccCCCCeEEEEEccCC-CeEEEEeCCCcEEEEECccCc-cccccc-----ccccCeEEEEEeCCCCEEEEeceeeEEee
Q psy9327 5 FETKSARVKGLSFHPKR-PWILSSLHNGVIQLWDYRMNT-LLEKFD-----EHEGPVRGICFHNQQPIFVSGGKMIVMAY 77 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg-~~Lasg~~dg~I~iWD~~~~~-~l~~~~-----~h~~~V~~i~fsp~~~~l~sgs~~~~~~~ 77 (641)
=+||...++|-+|||+. ..+++++.||+++|||+..-+ .+..|. +..-+++.++|++++++||+|+
T Consensus 264 TKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc------- 336 (641)
T KOG0772|consen 264 TKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGC------- 336 (641)
T ss_pred cCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcc-------
Confidence 47999999999999954 579999999999999996543 333332 3445899999999999999998
Q ss_pred eceeeecccCCcceeeEEEeeCCCeEEEEECCCCe--e-EEEEccCCC--CeEEEEEccCCCEEEEEeCCCeEEEEECCC
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK--C-IFTLLGHLD--YIRTTFFHHEYPWILSASDDQTIRIWYWQS 152 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~--~-~~~~~~h~~--~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~ 152 (641)
.||.|++||..... + ...-+.|.+ .|+++.|+++|++|+|-|.|+++++||+++
T Consensus 337 ---------------------~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq 395 (641)
T KOG0772|consen 337 ---------------------LDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQ 395 (641)
T ss_pred ---------------------cCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccc
Confidence 99999999986542 2 233456887 899999999999999999999999999986
Q ss_pred C-eeEEEEccCCC--CEEEEEEecCCCEEEEEeC------CCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeee
Q psy9327 153 R-NCICVLTGHNH--YVMCAQFHPTDDIVVSASL------DQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKP 223 (641)
Q Consensus 153 ~-~~i~~l~~h~~--~V~sl~fsp~g~~lvSgs~------DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~ 223 (641)
. +++.+..+-.. +-+.++|||+..+|++|+. .|++.+||-.+...+..+.-.+..|.. ...||-..-
T Consensus 396 ~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~-~~WhpkLNQ--- 471 (641)
T KOG0772|consen 396 FKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVR-CLWHPKLNQ--- 471 (641)
T ss_pred cccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEE-Eeecchhhh---
Confidence 4 46666554433 3467899999999999865 578999999998888777643333332 234442221
Q ss_pred eeeeCCCeeEEEe
Q psy9327 224 VKYCNPKHTLHIC 236 (641)
Q Consensus 224 l~s~~~d~~I~i~ 236 (641)
+..++.+|+++++
T Consensus 472 i~~gsgdG~~~vy 484 (641)
T KOG0772|consen 472 IFAGSGDGTAHVY 484 (641)
T ss_pred eeeecCCCceEEE
Confidence 3344555665544
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.9e-17 Score=158.84 Aligned_cols=163 Identities=21% Similarity=0.368 Sum_probs=138.6
Q ss_pred ccCCCCeEEEEEcc-CCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCC---CCEEEEeceeeEEeeecee
Q psy9327 6 ETKSARVKGLSFHP-KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ---QPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 6 ~~H~~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~---~~~l~sgs~~~~~~~~~~~ 81 (641)
.+|+-.|.++.|-| |.-++.+++.|.++++||..+-+....| .-.+.|.+-+++|- ..++++|.
T Consensus 98 ~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F-~me~~VYshamSp~a~sHcLiA~gt----------- 165 (397)
T KOG4283|consen 98 NGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDF-KMEGKVYSHAMSPMAMSHCLIAAGT----------- 165 (397)
T ss_pred ccceeeeeeeEEeeecCceeecccccceEEEeecccceeeEEe-ecCceeehhhcChhhhcceEEEEec-----------
Confidence 57888999999999 5568899999999999999988877777 35678888888883 33555554
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCE-EEEEeCCCeEEEEECCCC-eeEEEE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPW-ILSASDDQTIRIWYWQSR-NCICVL 159 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~-l~sgs~Dg~I~vWd~~~~-~~i~~l 159 (641)
.|-+|++.|+.+|.+.+++.||.+.|.++.|+|...| |++||.||.|++||++.. .|..++
T Consensus 166 -----------------r~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~l 228 (397)
T KOG4283|consen 166 -----------------RDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVL 228 (397)
T ss_pred -----------------CCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEe
Confidence 8999999999999999999999999999999998775 578999999999999754 344444
Q ss_pred --------------ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce
Q psy9327 160 --------------TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 197 (641)
Q Consensus 160 --------------~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~ 197 (641)
..|.+.|..++|..++..+++++.|..+++|+..+++.
T Consensus 229 D~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~n 280 (397)
T KOG4283|consen 229 DQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRN 280 (397)
T ss_pred ecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCcc
Confidence 35778899999999999999999999999999987653
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.5e-16 Score=150.31 Aligned_cols=214 Identities=19% Similarity=0.320 Sum_probs=167.5
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECcc---------C-cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRM---------N-TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~---------~-~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
..|.+-+++|.+++|++|..+|+|-+..+.+ + ..+-.+++|+++|..++|+ ..+|++|+
T Consensus 11 ~tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g--------- 79 (325)
T KOG0649|consen 11 NTVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG--------- 79 (325)
T ss_pred HHHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc---------
Confidence 4566778999999999999999999998742 1 2344568999999999999 45788885
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCee------EEEE--ccCC-----CCeEEEEEccCCCEEEEEeCCCeEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC------IFTL--LGHL-----DYIRTTFFHHEYPWILSASDDQTIR 146 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~------~~~~--~~h~-----~~V~~v~fsp~~~~l~sgs~Dg~I~ 146 (641)
||.|+-|.++.... +... .-|. ..|+++...|..+-++.++.|+.++
T Consensus 80 --------------------dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y 139 (325)
T KOG0649|consen 80 --------------------DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIY 139 (325)
T ss_pred --------------------CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEE
Confidence 79999998754311 1111 1132 3688999999887788888999999
Q ss_pred EEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC----------CceeeecccCCC
Q psy9327 147 IWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM----------GKLVLSMKSKHP 216 (641)
Q Consensus 147 vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~----------~~~v~s~~~~~~ 216 (641)
-||+++++...+++||+++|.++.--.....++||+.||++|+||.+++++...+... ++++.+++...
T Consensus 140 ~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~e- 218 (325)
T KOG0649|consen 140 QVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNE- 218 (325)
T ss_pred EEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccC-
Confidence 9999999999999999999999998666778999999999999999999988877532 34444433222
Q ss_pred ceeeeeeeeeeCCCeeEEEec-CCCcceeeecCCcceEEEEEcCCc
Q psy9327 217 IWKYCKPVKYCNPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESG 261 (641)
Q Consensus 217 v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g 261 (641)
-| ..|+....+.+|. +..++.+.++-..++..+.|..+.
T Consensus 219 dW------lvCGgGp~lslwhLrsse~t~vfpipa~v~~v~F~~d~ 258 (325)
T KOG0649|consen 219 DW------LVCGGGPKLSLWHLRSSESTCVFPIPARVHLVDFVDDC 258 (325)
T ss_pred ce------EEecCCCceeEEeccCCCceEEEecccceeEeeeecce
Confidence 22 2345677899999 667888888889999999999873
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.1e-17 Score=170.02 Aligned_cols=199 Identities=15% Similarity=0.235 Sum_probs=154.8
Q ss_pred ccCCCCeEEEEEccC-CCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCC-EEEEeceeeEEeeeceeee
Q psy9327 6 ETKSARVKGLSFHPK-RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP-IFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 6 ~~H~~~V~~l~fspd-g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~-~l~sgs~~~~~~~~~~~~~ 83 (641)
++|++.|.+|+|+.. .+.|||||.|.+|++||+.+|++...+..|.+.|.+++|||..+ .|++|+
T Consensus 240 ~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs------------- 306 (463)
T KOG0270|consen 240 SGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGS------------- 306 (463)
T ss_pred ccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEecc-------------
Confidence 479999999999874 56899999999999999999999999999999999999999655 667776
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeE-EEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCC-eeEEEEc
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCI-FTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSR-NCICVLT 160 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~-~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~-~~i~~l~ 160 (641)
.|++|.+.|.+.-... ..++ ..+.|-.++|+|... .++++.+||+++-+|.|+. +++.+++
T Consensus 307 ---------------~D~~V~l~D~R~~~~s~~~wk-~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~ 370 (463)
T KOG0270|consen 307 ---------------YDGTVALKDCRDPSNSGKEWK-FDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLK 370 (463)
T ss_pred ---------------ccceEEeeeccCccccCceEE-eccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEE
Confidence 9999999999842221 1222 457888999999655 6788899999999999875 8999999
Q ss_pred cCCCCEEEEEEecC-CCEEEEEeCCCeEEEEecCCCceeeeccC---CCceeeecccCCCceeeeeeeeeeCCCeeEEEe
Q psy9327 161 GHNHYVMCAQFHPT-DDIVVSASLDQTIRVWDISGLRKKNVAPG---MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236 (641)
Q Consensus 161 ~h~~~V~sl~fsp~-g~~lvSgs~DgtI~IWD~~~~~~~~~~~~---~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~ 236 (641)
+|.+.|.++++++. ..+++++|.|++|++|++..-........ .+. ..|+. +--...+.++.|+..+.+++|
T Consensus 371 AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~r-l~c~~---~~~~~a~~la~GG~k~~~~vw 446 (463)
T KOG0270|consen 371 AHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGR-LHCFA---LDPDVAFTLAFGGEKAVLRVW 446 (463)
T ss_pred eccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccc-eeecc---cCCCcceEEEecCccceEEEe
Confidence 99999999999985 46889999999999999976443222110 111 11111 111223336777788888999
Q ss_pred c
Q psy9327 237 N 237 (641)
Q Consensus 237 d 237 (641)
|
T Consensus 447 d 447 (463)
T KOG0270|consen 447 D 447 (463)
T ss_pred e
Confidence 8
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.5e-16 Score=156.26 Aligned_cols=281 Identities=18% Similarity=0.261 Sum_probs=191.8
Q ss_pred eccCCCCeEEEEEcc----C-CCeEEEEeCCCcEEEEECccC---ccccccc--ccccCeEEEEEeC----CCCEEEEec
Q psy9327 5 FETKSARVKGLSFHP----K-RPWILSSLHNGVIQLWDYRMN---TLLEKFD--EHEGPVRGICFHN----QQPIFVSGG 70 (641)
Q Consensus 5 ~~~H~~~V~~l~fsp----d-g~~Lasg~~dg~I~iWD~~~~---~~l~~~~--~h~~~V~~i~fsp----~~~~l~sgs 70 (641)
.+.|..+|.+++|++ + -..+++.|. ..+.+|..... ..+..+. .|+..-..++|+- ..+++++||
T Consensus 34 ~ed~~~~I~gv~fN~~~~~~e~~vfatvG~-~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G 112 (385)
T KOG1034|consen 34 KEDHNKPIFGVAFNSFLGCDEPQVFATVGG-NRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGG 112 (385)
T ss_pred hccCCCccceeeeehhcCCCCCceEEEeCC-cEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeec
Confidence 468889999999995 2 235666665 56889987532 2333332 3777788888873 256778877
Q ss_pred eeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEE
Q psy9327 71 KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWY 149 (641)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd 149 (641)
.-|.|+|.|+.++++...+.+|.+.|..+.|+|+.+ ++++||.|.+|++||
T Consensus 113 ----------------------------~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwn 164 (385)
T KOG1034|consen 113 ----------------------------YLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWN 164 (385)
T ss_pred ----------------------------ceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEe
Confidence 899999999999999999999999999999999875 788999999999999
Q ss_pred CCCCeeEEEE---ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC--------CceeeecccCCCce
Q psy9327 150 WQSRNCICVL---TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM--------GKLVLSMKSKHPIW 218 (641)
Q Consensus 150 ~~~~~~i~~l---~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~--------~~~v~s~~~~~~v~ 218 (641)
+++..|+..| .||.+.|.++.|+++|..++|++.|.++++|++...+....+... ..+.-+....-|.|
T Consensus 165 I~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~f 244 (385)
T KOG1034|consen 165 IQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDF 244 (385)
T ss_pred ccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccc
Confidence 9999999887 589999999999999999999999999999999854322222110 00000000111111
Q ss_pred e---------ee-----eeeeeeCCCeeEEEecC-CCc-c---------eee----ecC-Ccce--EEEEEcCCccEEEE
Q psy9327 219 K---------YC-----KPVKYCNPKHTLHICNR-KME-P---------LCN----IHE-NTRV--KSGAWDESGVFIYT 266 (641)
Q Consensus 219 ~---------~~-----~~l~s~~~d~~I~i~d~-~~~-~---------~~~----~~~-~~~I--~sla~~p~g~~L~t 266 (641)
. -| --+.+-+.++.|..|-. +.. . ..+ +.- ...| ...+|+|-+.+|+.
T Consensus 245 st~diHrnyVDCvrw~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~ 324 (385)
T KOG1034|consen 245 STTDIHRNYVDCVRWFGDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLAL 324 (385)
T ss_pred cccccccchHHHHHHHhhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhh
Confidence 1 00 00445557778888873 211 1 111 111 1223 34567888999999
Q ss_pred ecCCeEEEEEcCCCCeE---eccccc-------eEEEEEcCcEEEEEeCCCCeEEEEe
Q psy9327 267 TSNHIKYAIVNGDHGII---RTLDLP-------IYITKIKGNQVYYLDRECSPHVLRI 314 (641)
Q Consensus 267 ~s~~~k~~l~~~~~g~I---~~~d~p-------~~~~~~~g~~v~~~~~dg~i~v~~~ 314 (641)
|...|++++|+.++..- .++..+ -..+..++..++....|+.+..|+.
T Consensus 325 gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdr 382 (385)
T KOG1034|consen 325 GNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDR 382 (385)
T ss_pred ccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEe
Confidence 99999999998765321 111110 1123456677777777777666643
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.6e-17 Score=171.67 Aligned_cols=248 Identities=19% Similarity=0.274 Sum_probs=176.3
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccc--ccccccCeEEEEEeCCCC-EEEEeceeeEEeee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK--FDEHEGPVRGICFHNQQP-IFVSGGKMIVMAYQ 78 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~--~~~h~~~V~~i~fsp~~~-~l~sgs~~~~~~~~ 78 (641)
++.+..|.+.|..+.|-|....|++++.|.+++.||+.+++++.. +.+|.+.|.+++|+|..+ .|++|+
T Consensus 93 lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGg-------- 164 (720)
T KOG0321|consen 93 LKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGG-------- 164 (720)
T ss_pred hcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeecc--------
Confidence 456789999999999999667899999999999999999988777 889999999999999766 566666
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCe---------------------------eEEEEccCCCCeEE---EE
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK---------------------------CIFTLLGHLDYIRT---TF 128 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~---------------------------~~~~~~~h~~~V~~---v~ 128 (641)
.||.|.|||++-.. .+.....|...+.. +-
T Consensus 165 --------------------RDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv 224 (720)
T KOG0321|consen 165 --------------------RDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVV 224 (720)
T ss_pred --------------------CCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEE
Confidence 99999999985221 01122234444444 55
Q ss_pred EccCCCEEEEEeC-CCeEEEEECCCCeeEEE--------EccC---CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCc
Q psy9327 129 FHHEYPWILSASD-DQTIRIWYWQSRNCICV--------LTGH---NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196 (641)
Q Consensus 129 fsp~~~~l~sgs~-Dg~I~vWd~~~~~~i~~--------l~~h---~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~ 196 (641)
+..|...|+++|. |+.|+|||++...+... +.-| ...+.++.....|.+++..+.|++|..||+.+..
T Consensus 225 ~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s 304 (720)
T KOG0321|consen 225 LFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLS 304 (720)
T ss_pred EEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccC
Confidence 5567778998888 99999999987654332 2223 3346777777778888877789999999998754
Q ss_pred eeee--ccCC---CceeeecccCCCceeeeeeeeeeCCCeeEEEecCC---CcceeeecCCcceEEEEEcCC-ccEEEEe
Q psy9327 197 KKNV--APGM---GKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK---MEPLCNIHENTRVKSGAWDES-GVFIYTT 267 (641)
Q Consensus 197 ~~~~--~~~~---~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~---~~~~~~~~~~~~I~sla~~p~-g~~L~t~ 267 (641)
..-. +.++ .-++.++...+.. .+.+++.+....+|..+ ........+...|++++|.|. -.-++|+
T Consensus 305 ~sP~~~~sg~~~~sf~vks~lSpd~~-----~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~Tc 379 (720)
T KOG0321|consen 305 ISPVAEFSGKLNSSFYVKSELSPDDC-----SLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATC 379 (720)
T ss_pred cCchhhccCcccceeeeeeecCCCCc-----eEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccCCCceee
Confidence 3222 2111 1122222222221 26788899999999832 233334456788999999976 3446777
Q ss_pred cCCeEEEEEcCCCCe
Q psy9327 268 SNHIKYAIVNGDHGI 282 (641)
Q Consensus 268 s~~~k~~l~~~~~g~ 282 (641)
+.|-++.+|...++.
T Consensus 380 SdD~~~kiW~l~~~l 394 (720)
T KOG0321|consen 380 SDDFRVKIWRLSNGL 394 (720)
T ss_pred ccCcceEEEeccCch
Confidence 999999999875543
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.8e-17 Score=161.86 Aligned_cols=159 Identities=21% Similarity=0.354 Sum_probs=139.9
Q ss_pred CCCeEEEEEccCCC-eEEEEeCCCcEEEEECccCc---------ccccccccccCeEEEEEeCCCCEEEEeceeeEEeee
Q psy9327 9 SARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNT---------LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 9 ~~~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~---------~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~ 78 (641)
..+|.++.|+++.. .+++|+.|..|++|-+..+. .+..+..|...|+++.|+|+|..+++|+
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~-------- 84 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGG-------- 84 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecC--------
Confidence 46899999999776 99999999999999885432 2344567999999999999999999998
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECC--------C--------CeeEEEEccCCCCeEEEEEccCCCEEEEEeCC
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYK--------Q--------RKCIFTLLGHLDYIRTTFFHHEYPWILSASDD 142 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~--------t--------~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D 142 (641)
++|.|.+|--. + ......+.+|.+.|..++|+|++.++++|+.|
T Consensus 85 --------------------D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~d 144 (434)
T KOG1009|consen 85 --------------------DGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVD 144 (434)
T ss_pred --------------------CCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeecc
Confidence 99999999754 2 23455677899999999999999999999999
Q ss_pred CeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCC
Q psy9327 143 QTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195 (641)
Q Consensus 143 g~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~ 195 (641)
.++++||+..++....+.+|.++|..++|.|.+.++++-|.|+..+.+++...
T Consensus 145 ns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~ 197 (434)
T KOG1009|consen 145 NSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLK 197 (434)
T ss_pred ceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeeeeee
Confidence 99999999999999999999999999999999999999999998888877543
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.7e-17 Score=164.32 Aligned_cols=227 Identities=14% Similarity=0.165 Sum_probs=163.8
Q ss_pred CCCeEEEEeCCCcEEEEECccCc--------------cc-----cc--ccccccCeEEEEEeCC-CCEEEEeceeeEEee
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNT--------------LL-----EK--FDEHEGPVRGICFHNQ-QPIFVSGGKMIVMAY 77 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~--------------~l-----~~--~~~h~~~V~~i~fsp~-~~~l~sgs~~~~~~~ 77 (641)
.|+++|.|..|..|.|||+.-.. .. +. -.+|+..|..++|+.. ...|+||+
T Consensus 191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgs------- 263 (463)
T KOG0270|consen 191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGS------- 263 (463)
T ss_pred CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecC-------
Confidence 36799999999999999984110 00 01 1358888999999875 45666776
Q ss_pred eceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeeE
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCI 156 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~~i 156 (641)
.|.+|++||+.+|++..++..|.+.|.++.|||..+ .+++||.|++|.+.|.+...+.
T Consensus 264 ---------------------aD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s 322 (463)
T KOG0270|consen 264 ---------------------ADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNS 322 (463)
T ss_pred ---------------------CCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCcccc
Confidence 999999999999999999999999999999999655 7899999999999999854333
Q ss_pred EEEccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEecCCC-ceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEE
Q psy9327 157 CVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGL-RKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLH 234 (641)
Q Consensus 157 ~~l~~h~~~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~~-~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~ 234 (641)
...-.-.+.|-.++|+|.. ..+++++.||+++-+|+|+. ++.-++..|...|.++..+...- ..+.+++.++.++
T Consensus 323 ~~~wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p---~~l~t~s~d~~Vk 399 (463)
T KOG0270|consen 323 GKEWKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTP---GLLSTASTDKVVK 399 (463)
T ss_pred CceEEeccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCC---cceeeccccceEE
Confidence 2222245779999999965 57788889999999999876 66666776766665544322211 1267888999999
Q ss_pred EecCCCcceeeecC----CcceEEEEEcCCccE-EEEecCCeEEEEEc
Q psy9327 235 ICNRKMEPLCNIHE----NTRVKSGAWDESGVF-IYTTSNHIKYAIVN 277 (641)
Q Consensus 235 i~d~~~~~~~~~~~----~~~I~sla~~p~g~~-L~t~s~~~k~~l~~ 277 (641)
+|+.....-..... -++..|.+++|+-.+ ++.|+..+.+.+|+
T Consensus 400 lw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd 447 (463)
T KOG0270|consen 400 LWKFDVDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWD 447 (463)
T ss_pred EEeecCCCCcccccccccccceeecccCCCcceEEEecCccceEEEee
Confidence 99944433322222 344677788887544 44444444455554
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.4e-16 Score=166.58 Aligned_cols=293 Identities=15% Similarity=0.216 Sum_probs=201.7
Q ss_pred ceeeccCCCCeEEEEEccCCC---eEEEEeCCCcEEEEECccCc---------------------cccc----------c
Q psy9327 2 LTKFETKSARVKGLSFHPKRP---WILSSLHNGVIQLWDYRMNT---------------------LLEK----------F 47 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~---~Lasg~~dg~I~iWD~~~~~---------------------~l~~----------~ 47 (641)
+.+++||.+.|.+++|...+. +|||||.|..||||.+.-+. .... +
T Consensus 184 v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall 263 (764)
T KOG1063|consen 184 VAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALL 263 (764)
T ss_pred EEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhh
Confidence 467899999999999997554 88999999999999874332 1111 2
Q ss_pred cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC--eeEE-----EEccC
Q psy9327 48 DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR--KCIF-----TLLGH 120 (641)
Q Consensus 48 ~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~--~~~~-----~~~~h 120 (641)
.+|+..|.++.|+|.+..|++++ .|.++.+|.-.+. -.+. ...+.
T Consensus 264 ~GHeDWV~sv~W~p~~~~LLSAS----------------------------aDksmiiW~pd~~tGiWv~~vRlGe~gg~ 315 (764)
T KOG1063|consen 264 MGHEDWVYSVWWHPEGLDLLSAS----------------------------ADKSMIIWKPDENTGIWVDVVRLGEVGGS 315 (764)
T ss_pred cCcccceEEEEEccchhhheecc----------------------------cCcceEEEecCCccceEEEEEEeeccccc
Confidence 38999999999999998889987 9999999976543 2222 23345
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe---eEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCC--
Q psy9327 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN---CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL-- 195 (641)
Q Consensus 121 ~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~---~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~-- 195 (641)
.+...++.|+|+++.+++-+..|..++|..+... ......||.+.|+.++|+|.|.+++|+|.|+|-|+|---..
T Consensus 316 a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~ 395 (764)
T KOG1063|consen 316 AGGFWGGLWSPNSNVIIAHGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQ 395 (764)
T ss_pred ccceeeEEEcCCCCEEEEecccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeeccccccc
Confidence 5678899999999999999999999999843322 23345799999999999999999999999999999854311
Q ss_pred --ceeeeccCCCceeeecccCC-------------------------------------------------------Cce
Q psy9327 196 --RKKNVAPGMGKLVLSMKSKH-------------------------------------------------------PIW 218 (641)
Q Consensus 196 --~~~~~~~~~~~~v~s~~~~~-------------------------------------------------------~v~ 218 (641)
..+..-.-||..+.|+..-+ +++
T Consensus 396 ~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~ 475 (764)
T KOG1063|consen 396 EWHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFF 475 (764)
T ss_pred ceeeecccccccccceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCc
Confidence 11111111222111111000 000
Q ss_pred ------------------------------------------------------eeeee-----eee-eC----CCeeEE
Q psy9327 219 ------------------------------------------------------KYCKP-----VKY-CN----PKHTLH 234 (641)
Q Consensus 219 ------------------------------------------------------~~~~~-----l~s-~~----~d~~I~ 234 (641)
.++.+ +++ |. .-..|.
T Consensus 476 ~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~ 555 (764)
T KOG1063|consen 476 PGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIR 555 (764)
T ss_pred ccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEE
Confidence 00000 111 11 233688
Q ss_pred EecCC-Cccee-eecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEecccc------ceEE----EEEcCcEEEE
Q psy9327 235 ICNRK-MEPLC-NIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDL------PIYI----TKIKGNQVYY 302 (641)
Q Consensus 235 i~d~~-~~~~~-~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~------p~~~----~~~~g~~v~~ 302 (641)
+|+.. -.... ...|.-.|+.++|+|||++|++.+.|..+.+|.-.++..-..+. .-.+ |.+++..+++
T Consensus 556 lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaT 635 (764)
T KOG1063|consen 556 LWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFAT 635 (764)
T ss_pred EEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEE
Confidence 89833 33333 33457789999999999999999999999999754433222221 1111 3355666999
Q ss_pred EeCCCCeEEEEeCCc--chhhh
Q psy9327 303 LDRECSPHVLRIDPT--EFKFK 322 (641)
Q Consensus 303 ~~~dg~i~v~~~~~~--~~~~k 322 (641)
++||.++++|..... .|+.+
T Consensus 636 aSRDK~VkVW~~~~~~d~~i~~ 657 (764)
T KOG1063|consen 636 ASRDKKVKVWEEPDLRDKYISR 657 (764)
T ss_pred ecCCceEEEEeccCchhhhhhh
Confidence 999999999999876 44444
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.9e-17 Score=158.18 Aligned_cols=241 Identities=18% Similarity=0.329 Sum_probs=181.6
Q ss_pred cCCCCeEEEEEccC----CCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCC-EEEEeceeeEEeeecee
Q psy9327 7 TKSARVKGLSFHPK----RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP-IFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 7 ~H~~~V~~l~fspd----g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~-~l~sgs~~~~~~~~~~~ 81 (641)
.|...-..++|+-+ .+++|+||.-|.|+|.|+.+++....+.+|.+.|+.|.|+|+.+ ++++++
T Consensus 87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~S----------- 155 (385)
T KOG1034|consen 87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSAS----------- 155 (385)
T ss_pred CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEec-----------
Confidence 36677788888753 45899999999999999999999999999999999999999876 556665
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc---cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe----
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL---GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN---- 154 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~---~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~---- 154 (641)
.|.+|++||+++..++..|- +|.+.|.++.|++++..|+|+|.|.++++|++...+
T Consensus 156 -----------------kD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~ 218 (385)
T KOG1034|consen 156 -----------------KDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNK 218 (385)
T ss_pred -----------------CCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhh
Confidence 99999999999999998874 699999999999999999999999999999987421
Q ss_pred --e---------------------EE-EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEec-CCCceeeec-cCCC-ce
Q psy9327 155 --C---------------------IC-VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVA-PGMG-KL 207 (641)
Q Consensus 155 --~---------------------i~-~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~-~~~~~~~~~-~~~~-~~ 207 (641)
+ .+ +-.-|..+|-|+.|- |++++|=|-++.|..|-. +-.+.+... ++-+ ..
T Consensus 219 lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~T 296 (385)
T KOG1034|consen 219 LELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATT 296 (385)
T ss_pred hhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH--hhheeecccCceEEEEecchhhhhhhccCCCcccee
Confidence 0 00 223578888888886 789999999999999987 222222211 2111 11
Q ss_pred ee-ecc-cCCCceeeeee-------eeeeCCCeeEEEecCC-Ccc--eeeecC---CcceEEEEEcCCccEEEEecCCeE
Q psy9327 208 VL-SMK-SKHPIWKYCKP-------VKYCNPKHTLHICNRK-MEP--LCNIHE---NTRVKSGAWDESGVFIYTTSNHIK 272 (641)
Q Consensus 208 v~-s~~-~~~~v~~~~~~-------l~s~~~d~~I~i~d~~-~~~--~~~~~~---~~~I~sla~~p~g~~L~t~s~~~k 272 (641)
+. .+. ..-.+|.+-+. ++.|...|.+.+||.+ -++ ..++.+ +..|...+|+.+|.+|+..++++.
T Consensus 297 i~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~ 376 (385)
T KOG1034|consen 297 ILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGT 376 (385)
T ss_pred eeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCc
Confidence 11 011 11235555544 6778899999999933 222 222222 677888999999999998888887
Q ss_pred EEEEc
Q psy9327 273 YAIVN 277 (641)
Q Consensus 273 ~~l~~ 277 (641)
++-|+
T Consensus 377 Vwrwd 381 (385)
T KOG1034|consen 377 VWRWD 381 (385)
T ss_pred EEEEE
Confidence 77775
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.3e-16 Score=150.25 Aligned_cols=205 Identities=12% Similarity=0.216 Sum_probs=150.5
Q ss_pred ccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC----cccccccccccCeEEEEEe-C-CCCEEEEeceeeEEeeec
Q psy9327 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN----TLLEKFDEHEGPVRGICFH-N-QQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~----~~l~~~~~h~~~V~~i~fs-p-~~~~l~sgs~~~~~~~~~ 79 (641)
.+|.+-|.++.|.+-|+++|+|+.|++|+|||.+.. .+....+.|++.|-.+.|. | -|..+++++
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS--------- 80 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCS--------- 80 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEe---------
Confidence 478999999999999999999999999999997543 3455667899999999995 4 478888887
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECC---------CCeeEEEEccCCCCeEEEEEccC--CCEEEEEeCCCeEEEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYK---------QRKCIFTLLGHLDYIRTTFFHHE--YPWILSASDDQTIRIW 148 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~---------t~~~~~~~~~h~~~V~~v~fsp~--~~~l~sgs~Dg~I~vW 148 (641)
.|+++.||.=. ......++....+.|.++.|.|. |-.+++++.||.+|||
T Consensus 81 -------------------~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIY 141 (361)
T KOG2445|consen 81 -------------------YDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIY 141 (361)
T ss_pred -------------------cCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEE
Confidence 99999999751 12345567778889999999995 6689999999999999
Q ss_pred ECCCCe------eEEEEc-------cCCCCEEEEEEecC---CCEEEEEeCC-----CeEEEEecCC----CceeeeccC
Q psy9327 149 YWQSRN------CICVLT-------GHNHYVMCAQFHPT---DDIVVSASLD-----QTIRVWDISG----LRKKNVAPG 203 (641)
Q Consensus 149 d~~~~~------~i~~l~-------~h~~~V~sl~fsp~---g~~lvSgs~D-----gtI~IWD~~~----~~~~~~~~~ 203 (641)
+....- ..+.+. .+..+..|+.|+|. .+.|+.|+.+ +.+.||.... ......+++
T Consensus 142 EA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d 221 (361)
T KOG2445|consen 142 EAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPD 221 (361)
T ss_pred ecCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCC
Confidence 865432 222222 46677889999984 4688888876 5788997643 234566777
Q ss_pred CCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC
Q psy9327 204 MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK 239 (641)
Q Consensus 204 ~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~ 239 (641)
+..+|..+.....+-.....++.+..|| |+||..+
T Consensus 222 ~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~ 256 (361)
T KOG2445|consen 222 HTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVK 256 (361)
T ss_pred CCCcceeeeeccccCCceeeEEEeecCc-EEEEEEe
Confidence 7666665432221111111256666777 8999833
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.9e-15 Score=154.32 Aligned_cols=299 Identities=14% Similarity=0.156 Sum_probs=211.7
Q ss_pred eccCCCCeEEEEEcc--CCCeEEEEe--CCCcEEEEECccCcccccccccccCeEEEEEeCC-CCEEEEeceeeEEeeec
Q psy9327 5 FETKSARVKGLSFHP--KRPWILSSL--HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ-QPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 5 ~~~H~~~V~~l~fsp--dg~~Lasg~--~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~-~~~l~sgs~~~~~~~~~ 79 (641)
+..-...|.|++||+ .|.+++.-. .+..+.+||++.+......+..+..|....|||. .+++++.++...+.|+-
T Consensus 150 ~g~f~~GV~~vaFsk~~~G~~l~~vD~s~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~ 229 (626)
T KOG2106|consen 150 IGFFDRGVTCVAFSKINGGSLLCAVDDSNPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGKGHLYFWTL 229 (626)
T ss_pred eccccccceeeeecccCCCceEEEecCCCccccchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCCceEEEEEc
Confidence 334567899999998 455555443 3567899999999888888888899999999995 55888889888877731
Q ss_pred --eeeec----ccCCc----------ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCC
Q psy9327 80 --CILES----RNEPC----------LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ 143 (641)
Q Consensus 80 --~~~~~----~~~~~----------~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg 143 (641)
..+.. ...+. .....+++-.+|.|.||+-.+.+.......|.+.|.+++.-.+|. |+||+.|.
T Consensus 230 ~~~~l~k~~~~fek~ekk~Vl~v~F~engdviTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~Gt-llSGgKDR 308 (626)
T KOG2106|consen 230 RGGSLVKRQGIFEKREKKFVLCVTFLENGDVITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGT-LLSGGKDR 308 (626)
T ss_pred cCCceEEEeeccccccceEEEEEEEcCCCCEEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCcc-EeecCccc
Confidence 11111 01111 112344778899999999988887777779999999999999997 66699999
Q ss_pred eEEEEECCCCe----------------------------------------eEEEEccCCCCEEEEEEecCCCEEEEEeC
Q psy9327 144 TIRIWYWQSRN----------------------------------------CICVLTGHNHYVMCAQFHPTDDIVVSASL 183 (641)
Q Consensus 144 ~I~vWd~~~~~----------------------------------------~i~~l~~h~~~V~sl~fsp~g~~lvSgs~ 183 (641)
.|..||-.-++ -..+..+|.+....++.||+.+.+++++.
T Consensus 309 ki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gq 388 (626)
T KOG2106|consen 309 KIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQ 388 (626)
T ss_pred eEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccC
Confidence 99999832110 00112378888999999999999999999
Q ss_pred CCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeee-cCCcceEEEEEcCCcc
Q psy9327 184 DQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNI-HENTRVKSGAWDESGV 262 (641)
Q Consensus 184 DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~-~~~~~I~sla~~p~g~ 262 (641)
|+++++|+-....-... ...+..| ..+||.- -++.|...|.-.+.|.....+..+ .++.++.+++|+|+|.
T Consensus 389 dk~v~lW~~~k~~wt~~---~~d~~~~-~~fhpsg----~va~Gt~~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~ 460 (626)
T KOG2106|consen 389 DKHVRLWNDHKLEWTKI---IEDPAEC-ADFHPSG----VVAVGTATGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGA 460 (626)
T ss_pred cceEEEccCCceeEEEE---ecCceeE-eeccCcc----eEEEeeccceEEEEecccceeEEEEecCCceEEEEEcCCCC
Confidence 99999999221111111 1223333 3455533 256677778888888444444343 3588999999999999
Q ss_pred EEEEecCCeEEEEEcCC-CCeEe-----ccccceEE--EEEcCcEEEEEeCCCCeEEE
Q psy9327 263 FIYTTSNHIKYAIVNGD-HGIIR-----TLDLPIYI--TKIKGNQVYYLDRECSPHVL 312 (641)
Q Consensus 263 ~L~t~s~~~k~~l~~~~-~g~I~-----~~d~p~~~--~~~~g~~v~~~~~dg~i~v~ 312 (641)
+++.|+.|+.++++..+ +|... +--.|+.. |..+++.+.+-+.|-.+..|
T Consensus 461 ~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW 518 (626)
T KOG2106|consen 461 FLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYW 518 (626)
T ss_pred EEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEE
Confidence 99999999999887643 33211 11133332 55678899999999999999
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.5e-16 Score=167.45 Aligned_cols=238 Identities=17% Similarity=0.219 Sum_probs=190.4
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeC---CCCEEEEeceeeEEeeeceeeecc
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN---QQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp---~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
.-.+.+++.||+|+.||+|..-|.+++||+..-+.+..++.|+..|.|+.|+. ..++|++++
T Consensus 459 r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASas--------------- 523 (1080)
T KOG1408|consen 459 RFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASAS--------------- 523 (1080)
T ss_pred ccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhcc---------------
Confidence 35699999999999999999999999999999999999999999999999984 356788887
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCC-eeEEEEccCCCCeEEEEEccCC--CEEEEEeCCCeEEEEECCCCeeEEEEccC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFHHEY--PWILSASDDQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~-~~~~~~~~h~~~V~~v~fsp~~--~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h 162 (641)
.|.-|+|+|.... .++.++.+|...|+++.|--.| ..++++|.|..|.+=-.+....-..+..|
T Consensus 524 -------------rdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~ 590 (1080)
T KOG1408|consen 524 -------------RDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRH 590 (1080)
T ss_pred -------------CCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceecccc
Confidence 9999999998654 6788999999999999999877 67899999998865433321111222222
Q ss_pred -----CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC----CceeeecccCCCceeeeeeeeeeCCCeeE
Q psy9327 163 -----NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM----GKLVLSMKSKHPIWKYCKPVKYCNPKHTL 233 (641)
Q Consensus 163 -----~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~----~~~v~s~~~~~~v~~~~~~l~s~~~d~~I 233 (641)
...+..++..|...++++++.|..|+|||+++++..+.+.+. |..+--......++ +++..+|.++
T Consensus 591 t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY-----~atScsdktl 665 (1080)
T KOG1408|consen 591 TQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIY-----LATSCSDKTL 665 (1080)
T ss_pred ccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccE-----EEEeecCCce
Confidence 345778999999999999999999999999999999988763 22221111111111 5566689999
Q ss_pred EEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCC
Q psy9327 234 HICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 234 ~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~ 279 (641)
.++| -.++++.... |...|+.+.|.+|.+.|++.+.|+.+++|...
T Consensus 666 ~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp 713 (1080)
T KOG1408|consen 666 CFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWKLP 713 (1080)
T ss_pred EEEEeccchhhhhhcCcchheeeeeecccchhheeecCCceEEEEECc
Confidence 9999 6777776665 57789999999999999999999999999754
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.6e-17 Score=169.90 Aligned_cols=248 Identities=19% Similarity=0.290 Sum_probs=175.5
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECcc--------CcccccccccccCeEEEEEeCCCCEEEEeceeeEE
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRM--------NTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM 75 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~--------~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~ 75 (641)
++..|.+.|..++|+|..+.|++++.||++++|+++. -+++.+|.+|.+||.|++..+++..+.+||
T Consensus 289 tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg----- 363 (577)
T KOG0642|consen 289 TLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGG----- 363 (577)
T ss_pred eeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeec-----
Confidence 4567899999999999999999999999999999942 246788999999999999999999999998
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCC----------CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeE
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ----------RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTI 145 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t----------~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I 145 (641)
.||+|+.|++.. ......+.||.+.|+.+++|+....|++++.||++
T Consensus 364 -----------------------~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTv 420 (577)
T KOG0642|consen 364 -----------------------IDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTV 420 (577)
T ss_pred -----------------------cCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceE
Confidence 999999996531 13456788999999999999999999999999999
Q ss_pred EEEECCCCeeEEEEcc--CCCCEEEEEEecCCCEE-EEEeCCCeEEEEecCCCceeeeccCCC---c---eeeecccCCC
Q psy9327 146 RIWYWQSRNCICVLTG--HNHYVMCAQFHPTDDIV-VSASLDQTIRVWDISGLRKKNVAPGMG---K---LVLSMKSKHP 216 (641)
Q Consensus 146 ~vWd~~~~~~i~~l~~--h~~~V~sl~fsp~g~~l-vSgs~DgtI~IWD~~~~~~~~~~~~~~---~---~v~s~~~~~~ 216 (641)
+.|+.....+ .++.. -.++..++.|-.....+ ++...-+.--+.|.........+.... . .-......||
T Consensus 421 r~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~ 499 (577)
T KOG0642|consen 421 RLWEPTEESP-CTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHP 499 (577)
T ss_pred EeeccCCcCc-cccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecC
Confidence 9999876655 33432 23455666665433222 222222222233333333333332110 0 0000011122
Q ss_pred ceeeeeeeeeeCCCeeEEEec-CCCcceeee-cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE
Q psy9327 217 IWKYCKPVKYCNPKHTLHICN-RKMEPLCNI-HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII 283 (641)
Q Consensus 217 v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~-~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I 283 (641)
-..+ ..++..+..|+++| .++..+... .+...+++++++|+|.+|.+++.++++.+|..+..++
T Consensus 500 ~~~~---~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~ 565 (577)
T KOG0642|consen 500 TADI---TFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTC 565 (577)
T ss_pred CCCe---eEecccCCceecccccccccchheeeccceecceeecCCCceEEeecCCceeehhhccchhe
Confidence 2111 34556889999999 555555444 3467899999999999999999999999998766543
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=3e-14 Score=151.10 Aligned_cols=282 Identities=23% Similarity=0.358 Sum_probs=209.2
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeC-CCcEEEEECccCcccccccccccCeEEEEEeCCCC-EEEEeceeeEEeeec
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLH-NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP-IFVSGGKMIVMAYQG 79 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~-dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~-~l~sgs~~~~~~~~~ 79 (641)
+..+..|...|.+++|+|++..+++++. |+.+++|+...+..+..+..|...|.+++|+|+++ .+++++
T Consensus 148 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--------- 218 (466)
T COG2319 148 IRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGS--------- 218 (466)
T ss_pred EEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEec---------
Confidence 3567899999999999999998888886 99999999998888888888999999999999998 444435
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEE-EEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee-EE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIF-TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC-IC 157 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~-~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~-i~ 157 (641)
.|+.|++||...+.... .+.+|...+ ...|+|++..+++++.|+.+++||.+.... ..
T Consensus 219 -------------------~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 278 (466)
T COG2319 219 -------------------SDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLR 278 (466)
T ss_pred -------------------CCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEE
Confidence 89999999999888888 688898886 458999998899999999999999986664 55
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc--CCCceeeecccCCCceeeeeeeeeeCCCeeEEE
Q psy9327 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP--GMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHI 235 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~--~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i 235 (641)
.+.+|...+.++.|+|++..+++++.|+.+++||..+........ .+...+..+.. .+- .......+..++.+.+
T Consensus 279 ~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~d~~~~~ 355 (466)
T COG2319 279 TLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSF-SPD--GSLLVSGGSDDGTIRL 355 (466)
T ss_pred EEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEE-CCC--CCEEEEeecCCCcEEe
Confidence 557889999999999988888889999999999998877665554 44443444333 221 0011222246688888
Q ss_pred ecCCCcc-eeeecCCcceEEEEEcCCccEEEE-ecCCeEEEEEcCCCCeEec-cc---cceEE--EEEcCcEEEEEeCCC
Q psy9327 236 CNRKMEP-LCNIHENTRVKSGAWDESGVFIYT-TSNHIKYAIVNGDHGIIRT-LD---LPIYI--TKIKGNQVYYLDREC 307 (641)
Q Consensus 236 ~d~~~~~-~~~~~~~~~I~sla~~p~g~~L~t-~s~~~k~~l~~~~~g~I~~-~d---~p~~~--~~~~g~~v~~~~~dg 307 (641)
|+..... .........+..+.+.+ ...... +..++.+.+|+........ .. ..+.. ....+..+.....++
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (466)
T COG2319 356 WDLRTGKPLKTLEGHSNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDN 434 (466)
T ss_pred eecCCCceeEEecCCceEEEEEECC-CCCEEEEecCCCceEEEecccCeeeeeccCCCCcEEEEEECCCCcEEEEecCCC
Confidence 9954443 22222233388889988 544444 5778888888866654331 11 12221 223455666677888
Q ss_pred CeEEEEeCC
Q psy9327 308 SPHVLRIDP 316 (641)
Q Consensus 308 ~i~v~~~~~ 316 (641)
.+++|....
T Consensus 435 ~~~~~~~~~ 443 (466)
T COG2319 435 TIRLWDLKT 443 (466)
T ss_pred cEEEEeccC
Confidence 999998876
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.8e-16 Score=154.29 Aligned_cols=146 Identities=21% Similarity=0.348 Sum_probs=119.9
Q ss_pred CeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCC--CCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeC
Q psy9327 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ--QPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGD 99 (641)
Q Consensus 22 ~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~--~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 99 (641)
..+|++..+|+|++||..+++.+..|+++...++.+.|..+ ...+.+++ .
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~s----------------------------s 92 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCS----------------------------S 92 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEec----------------------------c
Confidence 46899999999999999999999999999999999999873 44566665 9
Q ss_pred CCeEEEEECCCCeeE--EEEccCC-CCeEEEEEccCCCEEEEEeC----CCeEEEEECCCCee-EEEE-ccCCCCEEEEE
Q psy9327 100 DYKIKVWNYKQRKCI--FTLLGHL-DYIRTTFFHHEYPWILSASD----DQTIRIWYWQSRNC-ICVL-TGHNHYVMCAQ 170 (641)
Q Consensus 100 Dg~I~vWD~~t~~~~--~~~~~h~-~~V~~v~fsp~~~~l~sgs~----Dg~I~vWd~~~~~~-i~~l-~~h~~~V~sl~ 170 (641)
||+|++||+++.... ..+..|. .+..+++-.-.+..+++|.. |-.|.+||++..+. +..+ ..|.+.|+++.
T Consensus 93 DG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lr 172 (376)
T KOG1188|consen 93 DGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLR 172 (376)
T ss_pred CCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEE
Confidence 999999999986543 3445555 35566666667778888753 77899999998765 5444 57999999999
Q ss_pred EecC-CCEEEEEeCCCeEEEEecCCC
Q psy9327 171 FHPT-DDIVVSASLDQTIRVWDISGL 195 (641)
Q Consensus 171 fsp~-g~~lvSgs~DgtI~IWD~~~~ 195 (641)
|||+ .++|+|||.||-|.+||+..-
T Consensus 173 FHP~~pnlLlSGSvDGLvnlfD~~~d 198 (376)
T KOG1188|consen 173 FHPSDPNLLLSGSVDGLVNLFDTKKD 198 (376)
T ss_pred ecCCCCCeEEeecccceEEeeecCCC
Confidence 9995 579999999999999999764
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=4e-16 Score=160.11 Aligned_cols=247 Identities=14% Similarity=0.202 Sum_probs=182.9
Q ss_pred CeEEEEEccCCCe-EEEEeCCCcEEEEECccC--c--ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 11 RVKGLSFHPKRPW-ILSSLHNGVIQLWDYRMN--T--LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 11 ~V~~l~fspdg~~-Lasg~~dg~I~iWD~~~~--~--~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
.+.++.|+....+ +++.+.|..|++|.-... + .+.+..+. .-.|++......++++||
T Consensus 36 g~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd--~~~Cv~~~s~S~y~~sgG--------------- 98 (673)
T KOG4378|consen 36 GDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGD--NAFCVACASQSLYEISGG--------------- 98 (673)
T ss_pred cceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccc--hHHHHhhhhcceeeeccC---------------
Confidence 4888899876643 345556888999974322 1 12222221 334444445558999998
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC-CC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH-NH 164 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h-~~ 164 (641)
..+.|+|||++...+...+++|.+.|+++.++..+.+|++++..|.|.|..+.++....+|... ..
T Consensus 99 -------------~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgq 165 (673)
T KOG4378|consen 99 -------------QSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQ 165 (673)
T ss_pred -------------cCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCC
Confidence 9999999999987788889999999999999999999999999999999999998877777643 45
Q ss_pred CEEEEEEecCC-CEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeee------eeeeCCCeeEEEec
Q psy9327 165 YVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKP------VKYCNPKHTLHICN 237 (641)
Q Consensus 165 ~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~------l~s~~~d~~I~i~d 237 (641)
.|+-+.|||.. .+|.++|++|.|.+||.++...+..+.. ....|...+|++ +++++.|..|.+||
T Consensus 166 svRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~--------~HsAP~~gicfspsne~l~vsVG~Dkki~~yD 237 (673)
T KOG4378|consen 166 SVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASE--------AHSAPCRGICFSPSNEALLVSVGYDKKINIYD 237 (673)
T ss_pred eEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhh--------hccCCcCcceecCCccceEEEecccceEEEee
Confidence 57799999975 4677899999999999998777655432 112233334443 67888999999999
Q ss_pred CC-CcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEeccccceEEEEEcCcEE
Q psy9327 238 RK-MEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQV 300 (641)
Q Consensus 238 ~~-~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~p~~~~~~~g~~v 300 (641)
.+ ......+.-..+..+++|.++|.+|+.|+..|+++.++. |....|+...+.+...|
T Consensus 238 ~~s~~s~~~l~y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~-----R~~k~Pv~v~sah~~sV 296 (673)
T KOG4378|consen 238 IRSQASTDRLTYSHPLSTVAFSECGTYLCAGNSKGELIAYDM-----RSTKAPVAVRSAHDASV 296 (673)
T ss_pred cccccccceeeecCCcceeeecCCceEEEeecCCceEEEEec-----ccCCCCceEeeecccce
Confidence 44 333444555788999999999999999999999998873 33445555544444433
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.6e-16 Score=155.99 Aligned_cols=132 Identities=22% Similarity=0.338 Sum_probs=116.5
Q ss_pred cccccccccCeEEEEEeCC-CCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC-------eeEE
Q psy9327 44 LEKFDEHEGPVRGICFHNQ-QPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR-------KCIF 115 (641)
Q Consensus 44 l~~~~~h~~~V~~i~fsp~-~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~-------~~~~ 115 (641)
.-.+.+|.++|..++|+|- ...+++|+ +|.+|+||++..+ +++.
T Consensus 74 ~P~v~GHt~~vLDi~w~PfnD~vIASgS----------------------------eD~~v~vW~IPe~~l~~~ltepvv 125 (472)
T KOG0303|consen 74 YPLVCGHTAPVLDIDWCPFNDCVIASGS----------------------------EDTKVMVWQIPENGLTRDLTEPVV 125 (472)
T ss_pred CCCccCccccccccccCccCCceeecCC----------------------------CCceEEEEECCCcccccCcccceE
Confidence 3446789999999999995 45666776 9999999998654 4577
Q ss_pred EEccCCCCeEEEEEccC-CCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 116 TLLGHLDYIRTTFFHHE-YPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 116 ~~~~h~~~V~~v~fsp~-~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
.+.+|...|..++|||. .+.|+|+|.|.+|.+||+.+++.+-++. |.+.|.++.|+.+|.++++++.|..|||||.++
T Consensus 126 ~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~ 204 (472)
T KOG0303|consen 126 ELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRR 204 (472)
T ss_pred EEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCC
Confidence 88999999999999996 4578999999999999999999998888 999999999999999999999999999999999
Q ss_pred CceeeeccCC
Q psy9327 195 LRKKNVAPGM 204 (641)
Q Consensus 195 ~~~~~~~~~~ 204 (641)
++....-.+|
T Consensus 205 ~~~v~e~~~h 214 (472)
T KOG0303|consen 205 GTVVSEGVAH 214 (472)
T ss_pred CcEeeecccc
Confidence 9888777554
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.8e-14 Score=149.57 Aligned_cols=283 Identities=20% Similarity=0.331 Sum_probs=211.2
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc-ccccccccc-cCeEEEEE-eCCCC-EEEEeceeeEEeeec
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT-LLEKFDEHE-GPVRGICF-HNQQP-IFVSGGKMIVMAYQG 79 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~-~l~~~~~h~-~~V~~i~f-sp~~~-~l~sgs~~~~~~~~~ 79 (641)
.+..|...+.++.|++.+..++.++.|+.+.+|+...+. .+..+..+. ..+..+.+ ++++. .++..+
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 130 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASS--------- 130 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccC---------
Confidence 356899999999999999999999999999999998876 666666644 37888888 78887 444444
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCC-CeeEEEEccCCCCeEEEEEccCCCEEEEEeC-CCeEEEEECCCCeeEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQ-RKCIFTLLGHLDYIRTTFFHHEYPWILSASD-DQTIRIWYWQSRNCIC 157 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t-~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~-Dg~I~vWd~~~~~~i~ 157 (641)
..|+.+.+||... ......+..|...|.+++|+|++..+++++. |+.+++|+...+..+.
T Consensus 131 ------------------~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (466)
T COG2319 131 ------------------SLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLS 192 (466)
T ss_pred ------------------CCCccEEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEE
Confidence 2599999999998 7888899999999999999999999999886 9999999999988999
Q ss_pred EEccCCCCEEEEEEecCCC-EEEEEeCCCeEEEEecCCCceee-eccCCCceeeecccCCCceeeeeeeeeeCCCeeEEE
Q psy9327 158 VLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKN-VAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHI 235 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~~~~~~-~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i 235 (641)
.+.+|...|.++.|+|++. .+++++.|++|++||.+.+.... .+.++..... ..+.+.. ..+.+++.++.+++
T Consensus 193 ~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~d~~~~~ 267 (466)
T COG2319 193 TLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVV--SSFSPDG---SLLASGSSDGTIRL 267 (466)
T ss_pred eeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCccee--EeECCCC---CEEEEecCCCcEEE
Confidence 9999999999999999998 66666999999999998777766 4665544421 1111111 12447889999999
Q ss_pred ecCC-Ccc-eeee-cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEecccc------ceEEEEE-c-CcEEEEE-
Q psy9327 236 CNRK-MEP-LCNI-HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDL------PIYITKI-K-GNQVYYL- 303 (641)
Q Consensus 236 ~d~~-~~~-~~~~-~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~------p~~~~~~-~-g~~v~~~- 303 (641)
|+.. ... .... .+...+.++.|+|++..+++++.++.+.+|+...+....... .+..... . +..+...
T Consensus 268 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (466)
T COG2319 268 WDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGG 347 (466)
T ss_pred eeecCCCcEEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEee
Confidence 9943 222 3333 447899999999988888888877778888655443221111 1111111 1 1344444
Q ss_pred eCCCCeEEEEeCCcc
Q psy9327 304 DRECSPHVLRIDPTE 318 (641)
Q Consensus 304 ~~dg~i~v~~~~~~~ 318 (641)
..|+.+.+|......
T Consensus 348 ~~d~~~~~~~~~~~~ 362 (466)
T COG2319 348 SDDGTIRLWDLRTGK 362 (466)
T ss_pred cCCCcEEeeecCCCc
Confidence 566777777777654
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-15 Score=166.67 Aligned_cols=231 Identities=15% Similarity=0.173 Sum_probs=182.8
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
|...|.+++.. +.+|++|+.+++|.+|.+.+++.-..+....-|+++++|+-+|.+++.|+
T Consensus 55 ~g~~v~~ia~~--s~~f~~~s~~~tv~~y~fps~~~~~iL~Rftlp~r~~~v~g~g~~iaags----------------- 115 (933)
T KOG1274|consen 55 SGELVSSIACY--SNHFLTGSEQNTVLRYKFPSGEEDTILARFTLPIRDLAVSGSGKMIAAGS----------------- 115 (933)
T ss_pred cCceeEEEeec--ccceEEeeccceEEEeeCCCCCccceeeeeeccceEEEEecCCcEEEeec-----------------
Confidence 55667776664 55899999999999999998876555666678999999999999999998
Q ss_pred CcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC-----
Q psy9327 88 PCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH----- 162 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h----- 162 (641)
+|..|++-+..+......+.+|+++|.++.|+|++.+||+.+.||+|++||++++.+..++.+-
T Consensus 116 -----------dD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~ 184 (933)
T KOG1274|consen 116 -----------DDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNE 184 (933)
T ss_pred -----------CceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCcccc
Confidence 9999999999999999999999999999999999999999999999999999999887776531
Q ss_pred ---CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC-CceeeecccCCCceeeeeeeeeeCCCeeEEEecC
Q psy9327 163 ---NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM-GKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 163 ---~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~-~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~ 238 (641)
...+..++|||+|..++..+.|++|++|+..++.....+.+. .....+..++.|--.+ ++++..++.|.+||-
T Consensus 185 ~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~Y---iAAs~~~g~I~vWnv 261 (933)
T KOG1274|consen 185 FILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKY---IAASTLDGQILVWNV 261 (933)
T ss_pred ccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcE---EeeeccCCcEEEEec
Confidence 334678999999888888889999999999999887777642 2222222333332222 788889999999994
Q ss_pred CCcceeeecCCcceEEEEEcCCccEEEEecCCeEE
Q psy9327 239 KMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKY 273 (641)
Q Consensus 239 ~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~ 273 (641)
.. .........|.+.+|.|++.-+-.....|.+
T Consensus 262 ~t--~~~~~~~~~Vc~~aw~p~~n~it~~~~~g~~ 294 (933)
T KOG1274|consen 262 DT--HERHEFKRAVCCEAWKPNANAITLITALGTL 294 (933)
T ss_pred cc--chhccccceeEEEecCCCCCeeEEEeecccc
Confidence 43 1112236789999999997666554444433
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.4e-16 Score=161.66 Aligned_cols=210 Identities=18% Similarity=0.255 Sum_probs=170.4
Q ss_pred EEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceee
Q psy9327 14 GLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRI 93 (641)
Q Consensus 14 ~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~ 93 (641)
|++......++++||..|.|+|||++.....+.+++|...|+++.++....+|++++
T Consensus 84 Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs----------------------- 140 (673)
T KOG4378|consen 84 CVACASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVS----------------------- 140 (673)
T ss_pred HHhhhhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEec-----------------------
Confidence 333334447899999999999999997767777889999999999999999999998
Q ss_pred EEEeeCCCeEEEEECCCCeeEEEEccC-CCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeeEEEE-ccCCCCEEEEE
Q psy9327 94 KSVLGDDYKIKVWNYKQRKCIFTLLGH-LDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCICVL-TGHNHYVMCAQ 170 (641)
Q Consensus 94 ~~~~s~Dg~I~vWD~~t~~~~~~~~~h-~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~~i~~l-~~h~~~V~sl~ 170 (641)
..|-|.|....++....+|... ...|+-+.|||..+ +|.+++++|.|.+||++...+++.+ ..|..+...++
T Consensus 141 -----~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gic 215 (673)
T KOG4378|consen 141 -----DGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGIC 215 (673)
T ss_pred -----cCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcce
Confidence 8999999999999877777744 34677999999776 5678999999999999988877665 68999999999
Q ss_pred EecC-CCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeee-----eeeeCCCeeEEEecCC--Ccc
Q psy9327 171 FHPT-DDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKP-----VKYCNPKHTLHICNRK--MEP 242 (641)
Q Consensus 171 fsp~-g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~-----l~s~~~d~~I~i~d~~--~~~ 242 (641)
|+|. ..+|++.+.|..|.+||+++.+....+ ...||...+.+. ++.|.+.|.+..||.+ ..+
T Consensus 216 fspsne~l~vsVG~Dkki~~yD~~s~~s~~~l----------~y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~P 285 (673)
T KOG4378|consen 216 FSPSNEALLVSVGYDKKINIYDIRSQASTDRL----------TYSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAP 285 (673)
T ss_pred ecCCccceEEEecccceEEEeeccccccccee----------eecCCcceeeecCCceEEEeecCCceEEEEecccCCCC
Confidence 9995 568899999999999999975543333 455665555443 7888999999999944 345
Q ss_pred eeeec-CCcceEEEEEcCCc
Q psy9327 243 LCNIH-ENTRVKSGAWDESG 261 (641)
Q Consensus 243 ~~~~~-~~~~I~sla~~p~g 261 (641)
+...+ +...|++++|-|.-
T Consensus 286 v~v~sah~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 286 VAVRSAHDASVTRVAFQPSP 305 (673)
T ss_pred ceEeeecccceeEEEeeecc
Confidence 55554 36679999998874
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=3e-15 Score=146.25 Aligned_cols=231 Identities=14% Similarity=0.123 Sum_probs=174.2
Q ss_pred cccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEE
Q psy9327 50 HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF 129 (641)
Q Consensus 50 h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~f 129 (641)
....|..+.|+|.+..|++++ +||++++||.........+. |..++.+++|
T Consensus 12 P~d~IS~v~f~~~~~~LLvss----------------------------WDgslrlYdv~~~~l~~~~~-~~~plL~c~F 62 (323)
T KOG1036|consen 12 PEDGISSVKFSPSSSDLLVSS----------------------------WDGSLRLYDVPANSLKLKFK-HGAPLLDCAF 62 (323)
T ss_pred ChhceeeEEEcCcCCcEEEEe----------------------------ccCcEEEEeccchhhhhhee-cCCceeeeec
Confidence 467899999999988888887 99999999999887666666 9999999999
Q ss_pred ccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceee
Q psy9327 130 HHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVL 209 (641)
Q Consensus 130 sp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~ 209 (641)
.++ ..+++|+-||.|+.+|+.++... .+-.|...|+|+.+++....+++||.|++|++||.++......+. .++.|.
T Consensus 63 ~d~-~~~~~G~~dg~vr~~Dln~~~~~-~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d-~~kkVy 139 (323)
T KOG1036|consen 63 ADE-STIVTGGLDGQVRRYDLNTGNED-QIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFD-QGKKVY 139 (323)
T ss_pred cCC-ceEEEeccCceEEEEEecCCcce-eeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccc-cCceEE
Confidence 984 56999999999999999988754 455699999999999999999999999999999999744444433 234555
Q ss_pred ecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeec---CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCC----
Q psy9327 210 SMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIH---ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG---- 281 (641)
Q Consensus 210 s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~---~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g---- 281 (641)
+|...... +..|..+..+.+|| ++........ -...+.+++.-|++.-.+.+|-+|++.+=-.++.
T Consensus 140 ~~~v~g~~------LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~ 213 (323)
T KOG1036|consen 140 CMDVSGNR------LVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQ 213 (323)
T ss_pred EEeccCCE------EEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHh
Confidence 54433222 55566889999999 3333322222 2567889999999888888898888876433332
Q ss_pred ----eEecc---------ccceEE--EEEcCcEEEEEeCCCCeEEEEeCCcc
Q psy9327 282 ----IIRTL---------DLPIYI--TKIKGNQVYYLDRECSPHVLRIDPTE 318 (641)
Q Consensus 282 ----~I~~~---------d~p~~~--~~~~g~~v~~~~~dg~i~v~~~~~~~ 318 (641)
..++- -.|+.. ++.-.+.+++++.||.+..|+..+.+
T Consensus 214 skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rK 265 (323)
T KOG1036|consen 214 SKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRK 265 (323)
T ss_pred hhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchh
Confidence 01111 113322 45556789999999999999998743
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-15 Score=155.25 Aligned_cols=247 Identities=10% Similarity=0.149 Sum_probs=178.4
Q ss_pred ceeeccCCCCeEEEEEccCCC-eEEEEeCCCcEEEEECccCcc--cccccccc-cCeEEEEEeCCCCEEEEeceeeEEee
Q psy9327 2 LTKFETKSARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNTL--LEKFDEHE-GPVRGICFHNQQPIFVSGGKMIVMAY 77 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~~--l~~~~~h~-~~V~~i~fsp~~~~l~sgs~~~~~~~ 77 (641)
|+.+.-...+|.+.+|+|+|. .+++++.......||+.+.+. +....++. ..+.....+|++++++..|
T Consensus 250 lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G------- 322 (514)
T KOG2055|consen 250 LQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAG------- 322 (514)
T ss_pred heeeeeccCccceeeecCCCceEEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcc-------
Confidence 445555568899999999999 899999999999999988754 22223333 3566778899999999998
Q ss_pred eceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~ 157 (641)
..|.|.+....+++.+.+++ -.+.|++++|+.++..|++++.+|.|.+||++.+.|++
T Consensus 323 ---------------------~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~ 380 (514)
T KOG2055|consen 323 ---------------------NNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLH 380 (514)
T ss_pred ---------------------cCceEEeehhhhhhhhheee-eccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEE
Confidence 99999999999999999988 67999999999999999999999999999999999999
Q ss_pred EEccCCC-CEEEEEEecCCCEEEEEeCCCeEEEEecCCC------ceeeeccCCCceeeecccCCCceeeeeeeeeeCCC
Q psy9327 158 VLTGHNH-YVMCAQFHPTDDIVVSASLDQTIRVWDISGL------RKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPK 230 (641)
Q Consensus 158 ~l~~h~~-~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~------~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d 230 (641)
.+....+ .-++++.++++.++++||..|.|.|||.++- +.+..+......|.+|...|.--.+ .+++-..+
T Consensus 381 rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiL--AiaS~~~k 458 (514)
T KOG2055|consen 381 RFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQIL--AIASRVKK 458 (514)
T ss_pred EEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhh--hhhhhccc
Confidence 9863221 2357778899999999999999999997542 2222222122222232222210000 01222233
Q ss_pred eeEEEec-CCCcceeeec----CCcceEEEEEcCCccEEEEecCCeEEEEEcCC
Q psy9327 231 HTLHICN-RKMEPLCNIH----ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 231 ~~I~i~d-~~~~~~~~~~----~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~ 279 (641)
..+++.- .+......++ .-..++|++|+|.|-+++.|...|++.+|..+
T Consensus 459 nalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 459 NALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred cceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence 4444332 1111112222 24678999999999999999999999998653
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.1e-16 Score=155.68 Aligned_cols=166 Identities=18% Similarity=0.305 Sum_probs=140.3
Q ss_pred eeccCCCCeEEEEEcc-CCCeEEEEeCCCcEEEEECccCc-------ccccccccccCeEEEEEeCCC-CEEEEeceeeE
Q psy9327 4 KFETKSARVKGLSFHP-KRPWILSSLHNGVIQLWDYRMNT-------LLEKFDEHEGPVRGICFHNQQ-PIFVSGGKMIV 74 (641)
Q Consensus 4 ~~~~H~~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~~~-------~l~~~~~h~~~V~~i~fsp~~-~~l~sgs~~~~ 74 (641)
.+.||+++|..++|+| +.+.+||||.|.+|.||++..+- .+..+.+|...|.-++|||.- +.|+++|
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag---- 151 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAG---- 151 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhcc----
Confidence 4679999999999999 55689999999999999986543 355677899999999999964 4667776
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN 154 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~ 154 (641)
.|.+|.+||+.+|..+-++. |.+.|.++.|+.+|.+|++++.|.+|+|||.++++
T Consensus 152 ------------------------~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~ 206 (472)
T KOG0303|consen 152 ------------------------SDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGT 206 (472)
T ss_pred ------------------------CCceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCc
Confidence 89999999999999988888 99999999999999999999999999999999999
Q ss_pred eEEEEccCCCC-EEEEEEecCCCEEEEEe---CCCeEEEEecCCCcee
Q psy9327 155 CICVLTGHNHY-VMCAQFHPTDDIVVSAS---LDQTIRVWDISGLRKK 198 (641)
Q Consensus 155 ~i~~l~~h~~~-V~sl~fsp~g~~lvSgs---~DgtI~IWD~~~~~~~ 198 (641)
.+..-.+|.+. -.-+.|-.+|..+.+|- .+..+-+||-.+....
T Consensus 207 ~v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP 254 (472)
T KOG0303|consen 207 VVSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEP 254 (472)
T ss_pred EeeecccccCCCcceeEEeccCceeeeccccccccceeccCcccccCc
Confidence 99888888763 44566777888555443 3778999998775543
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-16 Score=179.33 Aligned_cols=243 Identities=21% Similarity=0.250 Sum_probs=189.8
Q ss_pred CCCeEEEEEccCCCe----EEEEeCCCcEEEEECcc------CcccccccccccCeEEEEEeCCCC-EEEEeceeeEEee
Q psy9327 9 SARVKGLSFHPKRPW----ILSSLHNGVIQLWDYRM------NTLLEKFDEHEGPVRGICFHNQQP-IFVSGGKMIVMAY 77 (641)
Q Consensus 9 ~~~V~~l~fspdg~~----Lasg~~dg~I~iWD~~~------~~~l~~~~~h~~~V~~i~fsp~~~-~l~sgs~~~~~~~ 77 (641)
..+-+.|+|.+.|.. +|.|..||.|.+||... ...+.++..|.++|.++.|++.+. ++++|+
T Consensus 64 ~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa------- 136 (1049)
T KOG0307|consen 64 SNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGA------- 136 (1049)
T ss_pred cccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccC-------
Confidence 357789999997775 88889999999999764 235777889999999999999766 899998
Q ss_pred eceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc--CCCCeEEEEEccC-CCEEEEEeCCCeEEEEECCCCe
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG--HLDYIRTTFFHHE-YPWILSASDDQTIRIWYWQSRN 154 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~--h~~~V~~v~fsp~-~~~l~sgs~Dg~I~vWd~~~~~ 154 (641)
+||.|.|||++.-+.-.++.. -.+.|.+++|+.. ...|+|++.+|.+.|||++..+
T Consensus 137 ---------------------~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~ 195 (1049)
T KOG0307|consen 137 ---------------------DDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKK 195 (1049)
T ss_pred ---------------------CCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCC
Confidence 999999999987544444421 4568999999985 4467899999999999999998
Q ss_pred eEEEEccCCC--CEEEEEEecCC-CEEEEEeCCC---eEEEEecCCCc-eeeeccCCCceeeecccCCCceeeeeeeeee
Q psy9327 155 CICVLTGHNH--YVMCAQFHPTD-DIVVSASLDQ---TIRVWDISGLR-KKNVAPGMGKLVLSMKSKHPIWKYCKPVKYC 227 (641)
Q Consensus 155 ~i~~l~~h~~--~V~sl~fsp~g-~~lvSgs~Dg---tI~IWD~~~~~-~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~ 227 (641)
.+-.+..|.. .+..+.|||+. ..+++++.|. .|.+||+|.-. ..+++.+|.+.+.++...+.--. .+.++
T Consensus 196 pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~---lllSs 272 (1049)
T KOG0307|consen 196 PIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPR---LLLSS 272 (1049)
T ss_pred cccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCch---hhhcc
Confidence 8877766654 46789999986 5677777654 79999998643 45667788888888765432211 16788
Q ss_pred CCCeeEEEec-CCCcceeeecC-CcceEEEEEcCCcc-EEEEecCCeEEEEEcCCCCe
Q psy9327 228 NPKHTLHICN-RKMEPLCNIHE-NTRVKSGAWDESGV-FIYTTSNHIKYAIVNGDHGI 282 (641)
Q Consensus 228 ~~d~~I~i~d-~~~~~~~~~~~-~~~I~sla~~p~g~-~L~t~s~~~k~~l~~~~~g~ 282 (641)
+.|+.+.+|+ .+++.+..+.. +..+..+.|.|... .++..+-+|++-|+....+.
T Consensus 273 gkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 273 GKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred cCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 8999999999 66777777776 67899999999876 56666778888877654443
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.5e-17 Score=175.82 Aligned_cols=242 Identities=18% Similarity=0.293 Sum_probs=178.5
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
+++.+.+|.+.|.|..|...|.++++|+.|..|+||...++.++....+|++.|+.++.+.++..+++++
T Consensus 182 ~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS---------- 251 (1113)
T KOG0644|consen 182 NIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAAS---------- 251 (1113)
T ss_pred HHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcc----------
Confidence 3567889999999999999999999999999999999999999999999999999999999988888887
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE--
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV-- 158 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~-- 158 (641)
.|..|++|-+..+.++..+.+|++.|++++|+|-. +.++||++++||++---.+..
T Consensus 252 ------------------~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~pr 309 (1113)
T KOG0644|consen 252 ------------------NDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPR 309 (1113)
T ss_pred ------------------cCceEEEEecCCCchHHHHhccccceeeeccCccc----cCCCCCceEeccccccccccCCC
Confidence 99999999999999999999999999999999954 889999999999982111110
Q ss_pred ---EccCCCCEEEEEEecCCCEEEEEeC-------------------------------------CCeEEEEecCCCcee
Q psy9327 159 ---LTGHNHYVMCAQFHPTDDIVVSASL-------------------------------------DQTIRVWDISGLRKK 198 (641)
Q Consensus 159 ---l~~h~~~V~sl~fsp~g~~lvSgs~-------------------------------------DgtI~IWD~~~~~~~ 198 (641)
+. ..+-+.++.|...+.-+.|++. +-.+.+|++.++...
T Consensus 310 p~~~~-~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~ 388 (1113)
T KOG0644|consen 310 PLKFT-EKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLL 388 (1113)
T ss_pred CCCcc-cccceeeeeccccccccccccCCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccchhh
Confidence 00 1122333333333333333333 444555666555555
Q ss_pred eeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeecC-CcceEEEEEcCCccEEEEecCCeEEEEE
Q psy9327 199 NVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIHE-NTRVKSGAWDESGVFIYTTSNHIKYAIV 276 (641)
Q Consensus 199 ~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~-~~~I~sla~~p~g~~L~t~s~~~k~~l~ 276 (641)
+.+.+|..+++-+ ..||..... ..+.+.||...||| -.+.++..... ...+...+|+++|..++....+|.++|.
T Consensus 389 H~l~ghsd~~yvL-d~Hpfn~ri--~msag~dgst~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts~~lsd~hgql~i~ 465 (1113)
T KOG0644|consen 389 HNLMGHSDEVYVL-DVHPFNPRI--AMSAGYDGSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTSIALSDDHGQLYIL 465 (1113)
T ss_pred hhhcccccceeee-eecCCCcHh--hhhccCCCceEeeecccCCcceeeecccceeeccccCCCCceEecCCCCCceEEe
Confidence 5555544333221 122211110 23556899999999 44444443332 5678889999999999999999999988
Q ss_pred cC
Q psy9327 277 NG 278 (641)
Q Consensus 277 ~~ 278 (641)
+.
T Consensus 466 g~ 467 (1113)
T KOG0644|consen 466 GT 467 (1113)
T ss_pred cc
Confidence 74
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=2e-15 Score=154.10 Aligned_cols=240 Identities=19% Similarity=0.267 Sum_probs=170.3
Q ss_pred ccccccccccCeEEEEEeCCCC--EEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC----eeEEE
Q psy9327 43 LLEKFDEHEGPVRGICFHNQQP--IFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR----KCIFT 116 (641)
Q Consensus 43 ~l~~~~~h~~~V~~i~fsp~~~--~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~----~~~~~ 116 (641)
.....+-+.++|++++|||..+ .+++|+ ..|+|-+||+.+. .-+..
T Consensus 178 ~~~v~kv~~~Rit~l~fHPt~~~~lva~Gd----------------------------K~G~VG~Wn~~~~~~d~d~v~~ 229 (498)
T KOG4328|consen 178 ILNVAKVTDRRITSLAFHPTENRKLVAVGD----------------------------KGGQVGLWNFGTQEKDKDGVYL 229 (498)
T ss_pred ecceeEecccceEEEEecccCcceEEEEcc----------------------------CCCcEEEEecCCCCCccCceEE
Confidence 3344556899999999999654 667776 8999999999533 23566
Q ss_pred EccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEECCCCe-----------------------------------------
Q psy9327 117 LLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRN----------------------------------------- 154 (641)
Q Consensus 117 ~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~I~vWd~~~~~----------------------------------------- 154 (641)
+..|.++|.++.|+|.+ ..+++.|.||+|++-|++...
T Consensus 230 f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R 309 (498)
T KOG4328|consen 230 FTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLR 309 (498)
T ss_pred eccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEee
Confidence 78899999999999954 589999999999998876430
Q ss_pred ----eEEEEccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeee-----e
Q psy9327 155 ----CICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKP-----V 224 (641)
Q Consensus 155 ----~i~~l~~h~~~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~-----l 224 (641)
....+.-|...|++++++|.. .+++|||.|++.+|||++....+.. | .+..+...++|...+++ +
T Consensus 310 ~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~s-p----~lst~~HrrsV~sAyFSPs~gtl 384 (498)
T KOG4328|consen 310 TDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKAS-P----FLSTLPHRRSVNSAYFSPSGGTL 384 (498)
T ss_pred cCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCC-c----ceecccccceeeeeEEcCCCCce
Confidence 011123467789999999965 5789999999999999998665553 0 12222233333333332 6
Q ss_pred eeeCCCeeEEEecC-----CCcceeeecCC------cceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eeccccc---
Q psy9327 225 KYCNPKHTLHICNR-----KMEPLCNIHEN------TRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDLP--- 289 (641)
Q Consensus 225 ~s~~~d~~I~i~d~-----~~~~~~~~~~~------~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~p--- 289 (641)
++-..|..|++||. ...+...+.|. ......+|+|+..+++.|.--..+-++++..|. +..+-.|
T Consensus 385 ~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~ 464 (498)
T KOG4328|consen 385 LTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESS 464 (498)
T ss_pred EeeccCCceEEeecccccccCCccceeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCcccc
Confidence 77779999999995 24566666652 123457999999999999887788889988876 4444443
Q ss_pred ----eEEEEEcCc-EEEEEeCCCCeEEEEeC
Q psy9327 290 ----IYITKIKGN-QVYYLDRECSPHVLRID 315 (641)
Q Consensus 290 ----~~~~~~~g~-~v~~~~~dg~i~v~~~~ 315 (641)
+..+|.-+. .+..++..|.+.+|.-+
T Consensus 465 tI~~vn~~HP~~~~~~aG~~s~Gki~vft~k 495 (498)
T KOG4328|consen 465 TIPSVNEFHPMRDTLAAGGNSSGKIYVFTNK 495 (498)
T ss_pred ccccceeecccccceeccCCccceEEEEecC
Confidence 333666666 44445577888877543
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.2e-15 Score=145.66 Aligned_cols=225 Identities=16% Similarity=0.259 Sum_probs=160.6
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc-ccccc-----ccccCeEEEEEeC--CCCEEEEeceeeEEeee
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL-LEKFD-----EHEGPVRGICFHN--QQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~-l~~~~-----~h~~~V~~i~fsp--~~~~l~sgs~~~~~~~~ 78 (641)
.+-+.|.|+.|.|++..+++-. |..|.+|+++.+.. +..+. ++....++-+|+| ++..+++.
T Consensus 121 eavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt--------- 190 (370)
T KOG1007|consen 121 EAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT--------- 190 (370)
T ss_pred HHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe---------
Confidence 4557899999999999888776 78899999987654 22221 2455677788988 78888887
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc-cCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCC-Cee
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL-GHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQS-RNC 155 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~-~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~-~~~ 155 (641)
.|++++.||.++.+....+. .|...|+.+.|+|+.. +|++|++||.|++||.+. ..+
T Consensus 191 --------------------~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~p 250 (370)
T KOG1007|consen 191 --------------------SDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFP 250 (370)
T ss_pred --------------------CCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCcc
Confidence 59999999999887766664 5888999999999765 788999999999999985 458
Q ss_pred EEEEccCCCCEEEEEEecC-CCEEEEEeCCCeEEEEecCCCceeeecc-CCCceeeecccCCCceeeeeeeeeeCCCeeE
Q psy9327 156 ICVLTGHNHYVMCAQFHPT-DDIVVSASLDQTIRVWDISGLRKKNVAP-GMGKLVLSMKSKHPIWKYCKPVKYCNPKHTL 233 (641)
Q Consensus 156 i~~l~~h~~~V~sl~fsp~-g~~lvSgs~DgtI~IWD~~~~~~~~~~~-~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I 233 (641)
+..+.+|.+.|.++.|+|. ..+|+|||.|..|.+|...+-.....+. ++...-. ..+. +...+
T Consensus 251 v~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~---e~~d------------seer~ 315 (370)
T KOG1007|consen 251 VQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESES---EDED------------SEERV 315 (370)
T ss_pred ccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccC---cchh------------hHHhc
Confidence 8999999999999999996 4688999999999999876533222211 0000000 0000 00000
Q ss_pred EEecCCCcceeeec-CCcceEEEEEcCCccEEEE-ecCCeEEEEEcC
Q psy9327 234 HICNRKMEPLCNIH-ENTRVKSGAWDESGVFIYT-TSNHIKYAIVNG 278 (641)
Q Consensus 234 ~i~d~~~~~~~~~~-~~~~I~sla~~p~g~~L~t-~s~~~k~~l~~~ 278 (641)
+ -.....+.++. +...|.+++|+....+++. -|-||+++|.+.
T Consensus 316 k--pL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V 360 (370)
T KOG1007|consen 316 K--PLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSV 360 (370)
T ss_pred c--cccccccccccccccceEEEeeccCCCeeEEEeccCceEEeecC
Confidence 0 00111222333 4678999999988777664 467888887653
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.4e-14 Score=154.38 Aligned_cols=279 Identities=18% Similarity=0.221 Sum_probs=207.3
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc--cc-----ccccccccCeEEEEEeCCCCEEEEeceeeEEee
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT--LL-----EKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAY 77 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~--~l-----~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~ 77 (641)
+.||.+-|.++.|+|.+..|++++.|.++.+|.-.+.. -+ ....+..+.-.+..|+|++..+++-+
T Consensus 263 l~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g------- 335 (764)
T KOG1063|consen 263 LMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHG------- 335 (764)
T ss_pred hcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEec-------
Confidence 45999999999999999999999999999999865432 11 11223455678899999999988887
Q ss_pred eceeeecccCCcceeeEEEeeCCCeEEEEECCC---CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC-
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ---RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR- 153 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t---~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~- 153 (641)
..|-.++|-.+. ......+.||.+.|++++|+|.|.+++|.|.|++-|++-.-.+
T Consensus 336 ---------------------~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q 394 (764)
T KOG1063|consen 336 ---------------------RTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQ 394 (764)
T ss_pred ---------------------ccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccc
Confidence 899999998332 2345557799999999999999999999999999888632100
Q ss_pred --------------------------------------------------------------------------------
Q psy9327 154 -------------------------------------------------------------------------------- 153 (641)
Q Consensus 154 -------------------------------------------------------------------------------- 153 (641)
T Consensus 395 ~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~ 474 (764)
T KOG1063|consen 395 QEWHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAF 474 (764)
T ss_pred cceeeecccccccccceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCC
Confidence
Q ss_pred -----------------------------------------eeEEEEccCCCCEEEEEEecCCCEEEEEeCCC-----eE
Q psy9327 154 -----------------------------------------NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQ-----TI 187 (641)
Q Consensus 154 -----------------------------------------~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~Dg-----tI 187 (641)
..++.+.||.-.|.+++.+|++++++|++..+ .|
T Consensus 475 ~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI 554 (764)
T KOG1063|consen 475 FPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVI 554 (764)
T ss_pred cccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEE
Confidence 01123458999999999999999999998764 59
Q ss_pred EEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcc-----ee-eecCCcceEEEEEcCCc
Q psy9327 188 RVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEP-----LC-NIHENTRVKSGAWDESG 261 (641)
Q Consensus 188 ~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~-----~~-~~~~~~~I~sla~~p~g 261 (641)
++|+..+....+.+++|.-.|..+... |--. -+.+++.|.++.+|...... .. .-.|..-|+++.|+|++
T Consensus 555 ~lw~t~~W~~~~~L~~HsLTVT~l~FS-pdg~---~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde 630 (764)
T KOG1063|consen 555 RLWNTANWLQVQELEGHSLTVTRLAFS-PDGR---YLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDE 630 (764)
T ss_pred EEEeccchhhhheecccceEEEEEEEC-CCCc---EEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCccc
Confidence 999999999998888887666554321 1111 16788899999999832211 11 22356778999999999
Q ss_pred cEEEEecCCeEEEEEcCCCCe---Eec-----cccceEEEE-------EcCcEEEEEeCCCCeEEEEeC
Q psy9327 262 VFIYTTSNHIKYAIVNGDHGI---IRT-----LDLPIYITK-------IKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 262 ~~L~t~s~~~k~~l~~~~~g~---I~~-----~d~p~~~~~-------~~g~~v~~~~~dg~i~v~~~~ 315 (641)
.+++|+|.|.++.+|.-.++. |.- ...++.+.. .++..+..+-+.|.+.+|+..
T Consensus 631 ~~FaTaSRDK~VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~ 699 (764)
T KOG1063|consen 631 KYFATASRDKKVKVWEEPDLRDKYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRK 699 (764)
T ss_pred ceeEEecCCceEEEEeccCchhhhhhhhchhccCCceeeEEeeccccccccceEEEEecccEEEEEecc
Confidence 999999999999999866652 222 122222211 223466777788999999876
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.2e-16 Score=162.34 Aligned_cols=263 Identities=17% Similarity=0.258 Sum_probs=172.5
Q ss_pred CeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
.|..++|-|||..|+.+..| .+.+||...|.++..+++|...|.|++|+.||..+++|+
T Consensus 14 ci~d~afkPDGsqL~lAAg~-rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~-------------------- 72 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAGS-RLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGS-------------------- 72 (1081)
T ss_pred chheeEECCCCceEEEecCC-EEEEEeCCCcccccccccccceEEEEEEccCCceeccCC--------------------
Confidence 89999999999988777654 699999999999999999999999999999999999998
Q ss_pred eeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEE
Q psy9327 91 FRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQ 170 (641)
Q Consensus 91 ~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~ 170 (641)
.|..|.+|+-+-.- +..+ .|.+.|.|+.|+|-...++|++-. ..-+|........ ..+ ....+.+.+
T Consensus 73 --------aDK~VI~W~~klEG-~LkY-SH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~V~-K~k-ss~R~~~Cs 139 (1081)
T KOG1538|consen 73 --------ADKSVIIWTSKLEG-ILKY-SHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKSVS-KHK-SSSRIICCS 139 (1081)
T ss_pred --------CceeEEEecccccc-eeee-ccCCeeeEeecCchHHHhhhcchh-hccccChhhhhHH-hhh-hheeEEEee
Confidence 99999999865322 2223 499999999999998889998753 3557876544322 111 346788999
Q ss_pred EecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeee----------CCCeeEEEecCCC
Q psy9327 171 FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYC----------NPKHTLHICNRKM 240 (641)
Q Consensus 171 fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~----------~~d~~I~i~d~~~ 240 (641)
|..||.+++-|-.||||.+-+-........-.. | ....|+|.++++-.++ .-..++.++..++
T Consensus 140 WtnDGqylalG~~nGTIsiRNk~gEek~~I~Rp-g------g~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG 212 (1081)
T KOG1538|consen 140 WTNDGQYLALGMFNGTISIRNKNGEEKVKIERP-G------GSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSG 212 (1081)
T ss_pred ecCCCcEEEEeccCceEEeecCCCCcceEEeCC-C------CCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecc
Confidence 999999999999999999986554433332221 1 2344566655542111 1222233333233
Q ss_pred cceeee-cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCC---CeEeccccceE--EEEEcCcEEEEEeCCCCeEEEEe
Q psy9327 241 EPLCNI-HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH---GIIRTLDLPIY--ITKIKGNQVYYLDRECSPHVLRI 314 (641)
Q Consensus 241 ~~~~~~-~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~---g~I~~~d~p~~--~~~~~g~~v~~~~~dg~i~v~~~ 314 (641)
..+..- .-+-...++.+-++|.++..|+.++.+.++..+. |++-..|.=+. ..++++..+..+..||++..+++
T Consensus 213 ~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl 292 (1081)
T KOG1538|consen 213 KQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFTRDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNL 292 (1081)
T ss_pred eeecccccCCCCchhheeccCCcEEEEccCCCceEEEeecCeEEeeccccceeEEEEEEccCCceEEEEEccCeeehhhh
Confidence 322211 1123344555666666666666666666554443 33322222111 13455666666666666666544
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=4e-14 Score=150.87 Aligned_cols=279 Identities=16% Similarity=0.148 Sum_probs=200.3
Q ss_pred eeeccCC-CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 3 TKFETKS-ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 3 ~~~~~H~-~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
..++++. +.|.+|+|++ +..|.|.+.+|+|.-||+.+++....++...++|.+++.+|.+..++.|+
T Consensus 62 ~vi~g~~drsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~Igc----------- 129 (691)
T KOG2048|consen 62 PVIHGPEDRSIESLAWAE-GGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGC----------- 129 (691)
T ss_pred EEEecCCCCceeeEEEcc-CCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeec-----------
Confidence 3556664 6799999994 55688889999999999999999999999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEE--EEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIF--TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~--~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l 159 (641)
+||.+...+...++..+ .|....+.|.+++|+|++..+++|+.||.|++||..++..+...
T Consensus 130 -----------------ddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~ 192 (691)
T KOG2048|consen 130 -----------------DDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHII 192 (691)
T ss_pred -----------------CCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEe
Confidence 99988888888776654 35556789999999999999999999999999999998866522
Q ss_pred c--------cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCe
Q psy9327 160 T--------GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKH 231 (641)
Q Consensus 160 ~--------~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~ 231 (641)
. +...-|.++.|- ....|++|...|+|.+||...+...+....|...|.++.....-- .+.+++.|+
T Consensus 193 ~~~~d~l~k~~~~iVWSv~~L-rd~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d----~vfsaGvd~ 267 (691)
T KOG2048|consen 193 TMQLDRLSKREPTIVWSVLFL-RDSTIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADNED----RVFSAGVDP 267 (691)
T ss_pred eecccccccCCceEEEEEEEe-ecCcEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEcCCCC----eEEEccCCC
Confidence 1 122336677776 455789999999999999999998888887777777765432211 134455666
Q ss_pred eEEEecCCCc--cee----eecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEec--ccc--c--eEEEEEcCcE
Q psy9327 232 TLHICNRKME--PLC----NIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRT--LDL--P--IYITKIKGNQ 299 (641)
Q Consensus 232 ~I~i~d~~~~--~~~----~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~--~d~--p--~~~~~~~g~~ 299 (641)
.+.-+..... .+. ...+...+.+++..++ .+++|+.|..+.+.....-.-.. ... | ..+.....++
T Consensus 268 ~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d~~l~i~~s~~~~~~~h~~~~~~p~~~~v~~a~~~~ 345 (691)
T KOG2048|consen 268 KIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN--ALISGGRDFTLAICSSREFKNMDHRQKNLFPASDRVSVAPENR 345 (691)
T ss_pred ceEEEEecCCccceeeeccccCCcccceeeeeecc--eEEecceeeEEEEccccccCchhhhccccccccceeecCccce
Confidence 6666652221 121 1234678888888877 88888888887765432200000 000 0 0011122344
Q ss_pred EEEEeCCCCeEEEEeCCc
Q psy9327 300 VYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 300 v~~~~~dg~i~v~~~~~~ 317 (641)
++..-.+..+..|.+.+.
T Consensus 346 L~~~w~~h~v~lwrlGS~ 363 (691)
T KOG2048|consen 346 LLVLWKAHGVDLWRLGSV 363 (691)
T ss_pred EEEEeccccccceeccCc
Confidence 555555666777877766
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.3e-15 Score=144.53 Aligned_cols=240 Identities=16% Similarity=0.212 Sum_probs=179.6
Q ss_pred CCeEEEEEc-------cCCCeEEEEeCCCcEEEEECccCcccccccc--ccc---CeEEEEEeCCCCEEEEeceeeEEee
Q psy9327 10 ARVKGLSFH-------PKRPWILSSLHNGVIQLWDYRMNTLLEKFDE--HEG---PVRGICFHNQQPIFVSGGKMIVMAY 77 (641)
Q Consensus 10 ~~V~~l~fs-------pdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~--h~~---~V~~i~fsp~~~~l~sgs~~~~~~~ 77 (641)
..|...+|- |+..++|+++.+.-|++||.-+|+...++.. |-. ...+++|+|||..|.+|
T Consensus 105 ~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-------- 176 (406)
T KOG2919|consen 105 ETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-------- 176 (406)
T ss_pred CEEEEEEeeeccccCCCccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec--------
Confidence 345555554 6777999999999999999999998888764 322 45789999999999998
Q ss_pred eceeeecccCCcceeeEEEeeCCCeEEEEEC-CCCeeEEE---E----ccCCCCeEEEEEccCCC-EEEEEeCCCeEEEE
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDYKIKVWNY-KQRKCIFT---L----LGHLDYIRTTFFHHEYP-WILSASDDQTIRIW 148 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~-~t~~~~~~---~----~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vW 148 (641)
....|+++|+ +.|+--.. + .+..+-+.+++|||... .++.|+-.+++-|+
T Consensus 177 ---------------------ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy 235 (406)
T KOG2919|consen 177 ---------------------YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIY 235 (406)
T ss_pred ---------------------ccceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeE
Confidence 6889999999 55542211 1 23467899999999665 89999999999999
Q ss_pred ECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeC-CCeEEEEecCCCce-eeeccCC----Cceee-ecccCCCceeee
Q psy9327 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL-DQTIRVWDISGLRK-KNVAPGM----GKLVL-SMKSKHPIWKYC 221 (641)
Q Consensus 149 d~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~-DgtI~IWD~~~~~~-~~~~~~~----~~~v~-s~~~~~~v~~~~ 221 (641)
+...++++..+.+|.+.|+.++|+++|+.++||+. |-.|..||++..+. +..+.+| ++.|. .+....
T Consensus 236 ~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~------ 309 (406)
T KOG2919|consen 236 NDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKG------ 309 (406)
T ss_pred ecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCC------
Confidence 99999999999999999999999999999999886 77999999986433 2223222 12221 111111
Q ss_pred eeeeeeCCCeeEEEecC-C-Ccceeee-cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe
Q psy9327 222 KPVKYCNPKHTLHICNR-K-MEPLCNI-HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR 284 (641)
Q Consensus 222 ~~l~s~~~d~~I~i~d~-~-~~~~~~~-~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~ 284 (641)
--+++|+.+|.|++||. . +.....+ .....++.++++|--..++|++.+..+..-..++|...
T Consensus 310 ~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssGqr~f~~~~dD~ge~~ 375 (406)
T KOG2919|consen 310 EILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSGQRIFKYPKDDNGELE 375 (406)
T ss_pred ceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccceeeeccCceeecCCCccccccc
Confidence 11788889999999993 3 3323333 34678899999999888888887776666555566554
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=8.4e-15 Score=144.82 Aligned_cols=249 Identities=14% Similarity=0.239 Sum_probs=169.2
Q ss_pred ceeeccCCCCeEEEEEcc--CCCeEEEEeCCCcEEEEECccCcccccc--cccc-cCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 2 LTKFETKSARVKGLSFHP--KRPWILSSLHNGVIQLWDYRMNTLLEKF--DEHE-GPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fsp--dg~~Lasg~~dg~I~iWD~~~~~~l~~~--~~h~-~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
+..|++|...++.+.|.. ....+.+|+.||+|++||+++......+ ..+. .+-.|++-.-++..+++|....
T Consensus 63 l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~--- 139 (376)
T KOG1188|consen 63 LEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELT--- 139 (376)
T ss_pred hheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEeccccc---
Confidence 678999999999999987 4567899999999999999887654444 4454 4666676666777888875210
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee-EEE-EccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCC
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC-IFT-LLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSR 153 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~-~~~-~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~ 153 (641)
..|-.+.+||+++.+. +.. .+.|.+.|++++|||..+ +++|||.||-|.++|++..
T Consensus 140 ---------------------~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d 198 (376)
T KOG1188|consen 140 ---------------------RSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKD 198 (376)
T ss_pred ---------------------cCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCC
Confidence 1577899999998765 554 456999999999999766 8899999999999998754
Q ss_pred e----eEEEEccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEecCCCceeeeccCCC------------ceeee-cc-cC
Q psy9327 154 N----CICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPGMG------------KLVLS-MK-SK 214 (641)
Q Consensus 154 ~----~i~~l~~h~~~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~------------~~v~s-~~-~~ 214 (641)
. ...++ .|...|.++.|+.++ +.|.+-+.+.+..+|++..+.+...++... .++.. .. ..
T Consensus 199 ~EeDaL~~vi-N~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~~ 277 (376)
T KOG1188|consen 199 NEEDALLHVI-NHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHSPGD 277 (376)
T ss_pred cchhhHHHhh-cccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecccCCC
Confidence 3 22333 377889999999876 568889999999999999887655544210 11100 00 00
Q ss_pred CCceeeeeeeeee-CCCeeEEEec--CC---CcceeeecC--CcceEEEEEcCCccEEEEecCCeEEEEEcCC
Q psy9327 215 HPIWKYCKPVKYC-NPKHTLHICN--RK---MEPLCNIHE--NTRVKSGAWDESGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 215 ~~v~~~~~~l~s~-~~d~~I~i~d--~~---~~~~~~~~~--~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~ 279 (641)
..+|. ++.+ ...+.+.... .. +.....++. ..-|.++.|+-.+.+++||++||.+.+|..+
T Consensus 278 ~~~~~----l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~~ 346 (376)
T KOG1188|consen 278 KDTCA----LAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKVE 346 (376)
T ss_pred cceEE----EeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEecC
Confidence 00111 1111 2233333222 11 222233322 3456677787778888888888888888743
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.4e-14 Score=132.64 Aligned_cols=230 Identities=17% Similarity=0.231 Sum_probs=159.8
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc------cccc--cccc-----cCeEEEEEeCCCCEEEEe
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL------LEKF--DEHE-----GPVRGICFHNQQPIFVSG 69 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~------l~~~--~~h~-----~~V~~i~fsp~~~~l~sg 69 (641)
..+++|.++|..++|+ ..+|++|+ ||.|+-|.++.... +... .-|. ..|+++...|+..-++.+
T Consensus 56 v~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~A 132 (325)
T KOG0649|consen 56 VPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFA 132 (325)
T ss_pred eeccccCCCeeeeeee--hhheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEe
Confidence 3468999999999999 34577776 59999999864321 1111 1122 358889999876655555
Q ss_pred ceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEE
Q psy9327 70 GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149 (641)
Q Consensus 70 s~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd 149 (641)
+ .|+.++-||+++|+...++++|+++|.++.--...+.++||+.||++++||
T Consensus 133 g----------------------------GD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd 184 (325)
T KOG0649|consen 133 G----------------------------GDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWD 184 (325)
T ss_pred c----------------------------CCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEe
Confidence 5 699999999999999999999999999999877777899999999999999
Q ss_pred CCCCeeEEEEc---------cCCC-CEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC--CceeeecccCCCc
Q psy9327 150 WQSRNCICVLT---------GHNH-YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM--GKLVLSMKSKHPI 217 (641)
Q Consensus 150 ~~~~~~i~~l~---------~h~~-~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~--~~~v~s~~~~~~v 217 (641)
.++++++..+. .|.+ .|.+++- +.+|+++|+. ..+.+|.+++.++..+++-. -+.++
T Consensus 185 ~kt~k~v~~ie~yk~~~~lRp~~g~wigala~--~edWlvCGgG-p~lslwhLrsse~t~vfpipa~v~~v~-------- 253 (325)
T KOG0649|consen 185 TKTQKHVSMIEPYKNPNLLRPDWGKWIGALAV--NEDWLVCGGG-PKLSLWHLRSSESTCVFPIPARVHLVD-------- 253 (325)
T ss_pred ccccceeEEeccccChhhcCcccCceeEEEec--cCceEEecCC-CceeEEeccCCCceEEEecccceeEee--------
Confidence 99999888764 2322 3666654 5788887664 58999999998888877632 12221
Q ss_pred eeeeeeeeeeCCCeeEEEecCCCcceeeecC-CcceEEEEEcCCc-cEEEEecCCeEEEE
Q psy9327 218 WKYCKPVKYCNPKHTLHICNRKMEPLCNIHE-NTRVKSGAWDESG-VFIYTTSNHIKYAI 275 (641)
Q Consensus 218 ~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~-~~~I~sla~~p~g-~~L~t~s~~~k~~l 275 (641)
-+.-.+..++..+.+.-|..++..-..++. .....+..|+-.- +++-.++...++.+
T Consensus 254 -F~~d~vl~~G~g~~v~~~~l~Gvl~a~ip~~s~~c~s~s~~~~p~k~~s~ag~s~~~~i 312 (325)
T KOG0649|consen 254 -FVDDCVLIGGEGNHVQSYTLNGVLQANIPVESTACYSASWQTSPIKFISIAGFSNKLHI 312 (325)
T ss_pred -eecceEEEeccccceeeeeeccEEEEeccCCccceeeecccCCceEEEEecccceeeee
Confidence 111125566667778888766655554443 3445556665432 33333344444444
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.4e-16 Score=173.21 Aligned_cols=205 Identities=19% Similarity=0.336 Sum_probs=159.3
Q ss_pred ceeeccCCCCeEEEEEccCCC-eEEEEeCCCcEEEEECccCcccccc--cccccCeEEEEEeCC-CCEEEEeceeeEEee
Q psy9327 2 LTKFETKSARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNTLLEKF--DEHEGPVRGICFHNQ-QPIFVSGGKMIVMAY 77 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~~l~~~--~~h~~~V~~i~fsp~-~~~l~sgs~~~~~~~ 77 (641)
|.++..|++.|.++.|++.+. +||+|+.||.|.|||+...+.-..+ ....+.|.+++|+.. ...|++++
T Consensus 109 la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s------- 181 (1049)
T KOG0307|consen 109 LATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGS------- 181 (1049)
T ss_pred HhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccC-------
Confidence 567889999999999999655 9999999999999999875544443 225678999999875 45566665
Q ss_pred eceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC--CeEEEEEccCCC-EEEEEeCCC---eEEEEECC
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD--YIRTTFFHHEYP-WILSASDDQ---TIRIWYWQ 151 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~--~V~~v~fsp~~~-~l~sgs~Dg---~I~vWd~~ 151 (641)
.+|.+.|||++..+++-.+..|.+ .+..++|||+.. .++++++|. .|.+||++
T Consensus 182 ---------------------~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR 240 (1049)
T KOG0307|consen 182 ---------------------PSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLR 240 (1049)
T ss_pred ---------------------CCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeeccc
Confidence 899999999999988888876655 477899999764 566666553 69999998
Q ss_pred CC-eeEEEEccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeee--eeee
Q psy9327 152 SR-NCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKP--VKYC 227 (641)
Q Consensus 152 ~~-~~i~~l~~h~~~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~--l~s~ 227 (641)
.- .++.++.+|...|.++.|++.+ ++++|++.|+.|.+|+..+++.+..++..+.++..... ....+ ++..
T Consensus 241 ~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w-----~pr~P~~~A~a 315 (1049)
T KOG0307|consen 241 FASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQW-----CPRNPSVMAAA 315 (1049)
T ss_pred ccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeee-----cCCCcchhhhh
Confidence 54 4677889999999999999966 89999999999999999999999998865555433111 11111 4445
Q ss_pred CCCeeEEEecCC
Q psy9327 228 NPKHTLHICNRK 239 (641)
Q Consensus 228 ~~d~~I~i~d~~ 239 (641)
+-+|.|.|++..
T Consensus 316 sfdgkI~I~sl~ 327 (1049)
T KOG0307|consen 316 SFDGKISIYSLQ 327 (1049)
T ss_pred eeccceeeeeee
Confidence 567888888743
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.3e-14 Score=138.25 Aligned_cols=195 Identities=15% Similarity=0.204 Sum_probs=145.9
Q ss_pred eEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCC
Q psy9327 54 VRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133 (641)
Q Consensus 54 V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~ 133 (641)
..|+.|++.|.++++|+ .||.|.+||+.|...-..+.+|..+|++++||++|
T Consensus 26 a~~~~Fs~~G~~lAvGc----------------------------~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dg 77 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGC----------------------------ANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDG 77 (405)
T ss_pred cceEEeccCcceeeeec----------------------------cCCcEEEEEccccchhhhhhccccceeEEEecCCC
Confidence 78999999999999998 99999999999999989999999999999999999
Q ss_pred CEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecc
Q psy9327 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMK 212 (641)
Q Consensus 134 ~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~ 212 (641)
+.|+++|.|..|++||+..+.++..+. ...+|..+.|||.. +..+..-.+..-.+-++...+ ...++.....-.+..
T Consensus 78 r~LltsS~D~si~lwDl~~gs~l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~-h~~Lp~d~d~dln~s 155 (405)
T KOG1273|consen 78 RKLLTSSRDWSIKLWDLLKGSPLKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPK-HSVLPKDDDGDLNSS 155 (405)
T ss_pred CEeeeecCCceeEEEeccCCCceeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCc-eeeccCCCccccccc
Confidence 999999999999999999999998887 67899999999954 334333334444555555422 222221111111112
Q ss_pred cCCCceeeeee-eeeeCCCeeEEEec-CCCcceeeecC--CcceEEEEEcCCccEEEEecCCeEEEEEcC
Q psy9327 213 SKHPIWKYCKP-VKYCNPKHTLHICN-RKMEPLCNIHE--NTRVKSGAWDESGVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 213 ~~~~v~~~~~~-l~s~~~d~~I~i~d-~~~~~~~~~~~--~~~I~sla~~p~g~~L~t~s~~~k~~l~~~ 278 (641)
..|.++.-.+. +.+|.++|-+.++| .+.+.+.++.. ...|.++.++-.|.+++..+.|..+..+..
T Consensus 156 as~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~ 225 (405)
T KOG1273|consen 156 ASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEI 225 (405)
T ss_pred cccccccCCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEeh
Confidence 22222222111 66788999999999 55666666655 358889999999999998877777665543
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.4e-15 Score=152.60 Aligned_cols=184 Identities=15% Similarity=0.206 Sum_probs=149.3
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
..+.|.+.|.|-.|+|||.-|+++|.||.|++|. ++|-+..++.....+|+|++|.|+..-++-+
T Consensus 99 sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c-------------- 163 (737)
T KOG1524|consen 99 SISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCARWAPNSNSIVFC-------------- 163 (737)
T ss_pred hhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeEEEEECCCCCceEEe--------------
Confidence 4578999999999999999999999999999999 5675555566677899999999988877666
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCC
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~ 163 (641)
..+.+.+=-+.....+-.++.|++-|-++.|++..++++|||.|...+|||- .|..++.-..|.
T Consensus 164 ---------------~g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~-~G~~Lf~S~~~e 227 (737)
T KOG1524|consen 164 ---------------QGGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDA-QGANLFTSAAEE 227 (737)
T ss_pred ---------------cCCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecc-cCcccccCChhc
Confidence 3566777777766667778899999999999999999999999999999995 567777878899
Q ss_pred CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcce
Q psy9327 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPL 243 (641)
Q Consensus 164 ~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~ 243 (641)
.+|++++|+|+ ..++.+|.. +.| +..
T Consensus 228 y~ITSva~npd-~~~~v~S~n-t~R------------~~~---------------------------------------- 253 (737)
T KOG1524|consen 228 YAITSVAFNPE-KDYLLWSYN-TAR------------FSS---------------------------------------- 253 (737)
T ss_pred cceeeeeeccc-cceeeeeee-eee------------ecC----------------------------------------
Confidence 99999999999 555555543 333 000
Q ss_pred eeecCCcceEEEEEcCCccEEEEecCCeEEEE
Q psy9327 244 CNIHENTRVKSGAWDESGVFIYTTSNHIKYAI 275 (641)
Q Consensus 244 ~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l 275 (641)
...+.|..++|++||..++.|+..|.+++
T Consensus 254 ---p~~GSifnlsWS~DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 254 ---PRVGSIFNLSWSADGTQATCGTSTGQLIV 282 (737)
T ss_pred ---CCccceEEEEEcCCCceeeccccCceEEE
Confidence 11356777999999999999988877663
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.4e-14 Score=138.09 Aligned_cols=260 Identities=17% Similarity=0.201 Sum_probs=193.1
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc---ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT---LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~---~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
..|+--..+|+|.+|++|+..+|.+-.+..|.||.....+ ...++..|+..|++|+|+|..+.|++++
T Consensus 4 ~~~~~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs--------- 74 (361)
T KOG1523|consen 4 VVFHRLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCS--------- 74 (361)
T ss_pred EEeeeccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEcc---------
Confidence 4555567899999999999999999999999999986654 5778889999999999999999999998
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEEC-CCC--eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNY-KQR--KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~-~t~--~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i 156 (641)
.|..-+||.. ..+ ++...+..|+...+++.|+|.++.|++||....|.||-++..+-.
T Consensus 75 -------------------~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdW 135 (361)
T KOG1523|consen 75 -------------------HDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDW 135 (361)
T ss_pred -------------------CCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccce
Confidence 9999999998 444 456667789999999999999999999999999999988765432
Q ss_pred ----EEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCee
Q psy9327 157 ----CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHT 232 (641)
Q Consensus 157 ----~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~ 232 (641)
+.-+.+...|.+++|||++-+++.||.|+.+||+..--.. +..-+ ..+.|..-.+
T Consensus 136 WVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~-Vdekp-----------ap~pWgsk~P--------- 194 (361)
T KOG1523|consen 136 WVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKG-VDEKP-----------APTPWGSKMP--------- 194 (361)
T ss_pred ehhhhhCCccccceeeeeccCCcceecccccCcceeEEEEeeec-cccCC-----------CCCCCccCCc---------
Confidence 2234577889999999999999999999999999742100 00000 1111111111
Q ss_pred EEEecCCCcceeee-cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-----EeccccceEE-EEEcCcEEEEEeC
Q psy9327 233 LHICNRKMEPLCNI-HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-----IRTLDLPIYI-TKIKGNQVYYLDR 305 (641)
Q Consensus 233 I~i~d~~~~~~~~~-~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-----I~~~d~p~~~-~~~~g~~v~~~~~ 305 (641)
=++.+... ..++.+..+.|+|+|..|+-.+.|..+.+-+..... +..-++|... .-.+.+.++++..
T Consensus 195 ------FG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~~~~~~lP~ls~~~ise~~vv~ag~ 268 (361)
T KOG1523|consen 195 ------FGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQSVATAQLPLLSVSWISENSVVAAGY 268 (361)
T ss_pred ------HHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhccchhhccCCceeeEeecCCceeecCC
Confidence 01222223 347789999999999999988888777776544332 2233455333 3356777888888
Q ss_pred CCCeEEEEeCCc
Q psy9327 306 ECSPHVLRIDPT 317 (641)
Q Consensus 306 dg~i~v~~~~~~ 317 (641)
|+....+..+..
T Consensus 269 ~c~P~lf~~~~~ 280 (361)
T KOG1523|consen 269 DCGPVLFVTDEE 280 (361)
T ss_pred CCCceEEEeccc
Confidence 866666666654
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.9e-14 Score=139.94 Aligned_cols=165 Identities=12% Similarity=0.156 Sum_probs=137.2
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECcc------Cccccccc-ccccCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRM------NTLLEKFD-EHEGPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~------~~~l~~~~-~h~~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
.+.+|.+.|++|.|+.++++|++|+.|..+++|++.. .+++.... .|...|.|++|......+.+|+
T Consensus 51 D~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~------ 124 (609)
T KOG4227|consen 51 DVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGE------ 124 (609)
T ss_pred hhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCC------
Confidence 4568999999999999999999999999999999853 34444333 3568999999999999999998
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc--CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG--HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN 154 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~--h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~ 154 (641)
.+++|...|+++.+.+..+.. ..+.|..+..||..+.|++.++++.|.+||.+.+.
T Consensus 125 ----------------------~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~ 182 (609)
T KOG4227|consen 125 ----------------------RWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQ 182 (609)
T ss_pred ----------------------CcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCC
Confidence 999999999999998888763 23589999999999999999999999999998765
Q ss_pred -eEE--EEccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEecCCCc
Q psy9327 155 -CIC--VLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLR 196 (641)
Q Consensus 155 -~i~--~l~~h~~~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~~~ 196 (641)
.+. .+........++.|+|.. .+|++++..+-+-+||++...
T Consensus 183 ~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~ 228 (609)
T KOG4227|consen 183 NPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQA 228 (609)
T ss_pred CCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeecccc
Confidence 222 222334557789999965 678899999999999998644
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.4e-13 Score=131.85 Aligned_cols=237 Identities=14% Similarity=0.191 Sum_probs=158.0
Q ss_pred ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC----CeeEEEEccCCCCe
Q psy9327 49 EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ----RKCIFTLLGHLDYI 124 (641)
Q Consensus 49 ~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t----~~~~~~~~~h~~~V 124 (641)
+|..-|.++.|.+.|+.+++++ .|++|+|||.+. ..+....+.|.+.|
T Consensus 11 ~h~DlihdVs~D~~GRRmAtCS----------------------------sDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si 62 (361)
T KOG2445|consen 11 GHKDLIHDVSFDFYGRRMATCS----------------------------SDQTVKIWDSTSDSGTWSCTSSWRAHDGSI 62 (361)
T ss_pred CCcceeeeeeecccCceeeecc----------------------------CCCcEEEEeccCCCCceEEeeeEEecCCcE
Confidence 5888999999999999999998 999999999653 35667788999999
Q ss_pred EEEEEcc--CCCEEEEEeCCCeEEEEECCC-------C--eeEEEEccCCCCEEEEEEecC--CCEEEEEeCCCeEEEEe
Q psy9327 125 RTTFFHH--EYPWILSASDDQTIRIWYWQS-------R--NCICVLTGHNHYVMCAQFHPT--DDIVVSASLDQTIRVWD 191 (641)
Q Consensus 125 ~~v~fsp--~~~~l~sgs~Dg~I~vWd~~~-------~--~~i~~l~~h~~~V~sl~fsp~--g~~lvSgs~DgtI~IWD 191 (641)
..+.|-+ -|+.++++|.|+++.||.-+. + ....++......|+.++|.|. |-.+++++.||++|||+
T Consensus 63 ~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYE 142 (361)
T KOG2445|consen 63 WRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYE 142 (361)
T ss_pred EEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEe
Confidence 9999865 378999999999999997521 1 134566777889999999995 67899999999999998
Q ss_pred cCCC------ceeeecc------C-CCceeeecccCCCceeeeeeeeeeCC-----CeeEEEec--CCCcce---eeec-
Q psy9327 192 ISGL------RKKNVAP------G-MGKLVLSMKSKHPIWKYCKPVKYCNP-----KHTLHICN--RKMEPL---CNIH- 247 (641)
Q Consensus 192 ~~~~------~~~~~~~------~-~~~~v~s~~~~~~v~~~~~~l~s~~~-----d~~I~i~d--~~~~~~---~~~~- 247 (641)
.-.. .....+. + +.....|+......+ ..-.++.|+. .+.+.||. ..+..+ ..+.
T Consensus 143 A~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~-~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d 221 (361)
T KOG2445|consen 143 APDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRM-HEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPD 221 (361)
T ss_pred cCCccccccchhhhhhhhccCCcccccCcceEEeeccccc-cCceEEEEcccCCccccceEEEEecCCcceeeeehhcCC
Confidence 6432 2222221 0 111112211110000 0000222222 23677776 333233 3333
Q ss_pred CCcceEEEEEcCC-c---cEEEEecCCeEEEEEcCCCC-----------eEeccccceEE---------------EEEcC
Q psy9327 248 ENTRVKSGAWDES-G---VFIYTTSNHIKYAIVNGDHG-----------IIRTLDLPIYI---------------TKIKG 297 (641)
Q Consensus 248 ~~~~I~sla~~p~-g---~~L~t~s~~~k~~l~~~~~g-----------~I~~~d~p~~~---------------~~~~g 297 (641)
++.+|++++|.|+ | ..|++++.|| +.||+.... ....-++++.. +...|
T Consensus 222 ~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtG 300 (361)
T KOG2445|consen 222 HTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTG 300 (361)
T ss_pred CCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeee
Confidence 4889999999998 3 5788999998 777764310 01111222111 33457
Q ss_pred cEEEEEeCCCCeEEEEeC
Q psy9327 298 NQVYYLDRECSPHVLRID 315 (641)
Q Consensus 298 ~~v~~~~~dg~i~v~~~~ 315 (641)
..+.+.+.||.++.|..+
T Consensus 301 tiLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 301 TILSSTGDDGCVRLWKAN 318 (361)
T ss_pred eEEeecCCCceeeehhhh
Confidence 788888899999999655
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.4e-14 Score=136.10 Aligned_cols=178 Identities=17% Similarity=0.305 Sum_probs=133.7
Q ss_pred eeeccCCCCeEEEEEccCCC-eEEEEeCC-------CcEEEEECccC---------ccccccc-ccccCeEEEEEeCCCC
Q psy9327 3 TKFETKSARVKGLSFHPKRP-WILSSLHN-------GVIQLWDYRMN---------TLLEKFD-EHEGPVRGICFHNQQP 64 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~-~Lasg~~d-------g~I~iWD~~~~---------~~l~~~~-~h~~~V~~i~fsp~~~ 64 (641)
..|..|.+.|..++-+|..+ .|+++..+ ..+-||.+... +++..+. .+-+.|.|+.|.|++.
T Consensus 57 kvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~ 136 (370)
T KOG1007|consen 57 KVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSD 136 (370)
T ss_pred hhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCC
Confidence 45778899999999999555 55555432 23789987532 3444454 4667999999999999
Q ss_pred EEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee-EEEEc-----cCCCCeEEEEEcc--CCCEE
Q psy9327 65 IFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC-IFTLL-----GHLDYIRTTFFHH--EYPWI 136 (641)
Q Consensus 65 ~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~-~~~~~-----~h~~~V~~v~fsp--~~~~l 136 (641)
.+++- .|..|.+|++..+.. ...+. +|....++-+|+| ++..+
T Consensus 137 klasm-----------------------------~dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv 187 (370)
T KOG1007|consen 137 KLASM-----------------------------DDNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQV 187 (370)
T ss_pred eeEEe-----------------------------ccCceEEEEcccCcchheeecccccccccceecccccCCCCccceE
Confidence 99988 689999999987754 33332 3566778889988 56666
Q ss_pred EEEeCCCeEEEEECCCCeeEEEE-ccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEecCCCc-eeeeccCCCceeee
Q psy9327 137 LSASDDQTIRIWYWQSRNCICVL-TGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLR-KKNVAPGMGKLVLS 210 (641)
Q Consensus 137 ~sgs~Dg~I~vWd~~~~~~i~~l-~~h~~~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~~~-~~~~~~~~~~~v~s 210 (641)
++.+ |+++..||+++..+...+ .+|...|+.+.|+|+. ..|+||++||.|||||.++.+ ....+++|.++|.+
T Consensus 188 ~tt~-d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~ 263 (370)
T KOG1007|consen 188 ATTS-DSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWA 263 (370)
T ss_pred EEeC-CCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEE
Confidence 6655 799999999988776655 5788999999999975 678999999999999998644 34555555555544
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.8e-14 Score=149.63 Aligned_cols=164 Identities=19% Similarity=0.269 Sum_probs=135.7
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc-ccccCeEEEEEeC--CCCEEEEeceeeEEeeec
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD-EHEGPVRGICFHN--QQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~-~h~~~V~~i~fsp--~~~~l~sgs~~~~~~~~~ 79 (641)
++++||++.|+||+|+.+|.+|++|+.|-.+.|||.-..+++..+. +|.+.|.++.|-| +.+.+++|+
T Consensus 44 ~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgA--------- 114 (758)
T KOG1310|consen 44 AELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGA--------- 114 (758)
T ss_pred hhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEecc---------
Confidence 5789999999999999999999999999999999998888887775 7999999999998 456788887
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCC----------CeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQ----------RKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIW 148 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t----------~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vW 148 (641)
.|..|+++|+.. ....+.+..|.+.|.-++--|+++ .|.+++.||+|+-+
T Consensus 115 -------------------gDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQy 175 (758)
T KOG1310|consen 115 -------------------GDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQY 175 (758)
T ss_pred -------------------CcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeee
Confidence 999999999974 234566778999999999999995 67899999999999
Q ss_pred ECCCCe-eEE------E---EccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEecCC
Q psy9327 149 YWQSRN-CIC------V---LTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 149 d~~~~~-~i~------~---l~~h~~~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~ 194 (641)
|++... |-. . +.+..-...|+..+|.. .+|+.|+.|-..++||.+.
T Consensus 176 DiREph~c~p~~~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr 232 (758)
T KOG1310|consen 176 DIREPHVCNPDEDCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRR 232 (758)
T ss_pred cccCCccCCccccccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhh
Confidence 998632 111 1 11222346789999965 6889999999999999743
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=7.3e-13 Score=132.55 Aligned_cols=158 Identities=13% Similarity=0.228 Sum_probs=132.3
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccc---cccCeEEEEEeCCCCEEEEeceeeEEeeeceeeeccc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDE---HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRN 86 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~---h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~ 86 (641)
..|.++.++ .++|+++..+. |.|||+.+.+++.+++. +...+.++++++.+.+++--+.
T Consensus 88 t~IL~VrmN--r~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s--------------- 149 (391)
T KOG2110|consen 88 TSILAVRMN--RKRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGS--------------- 149 (391)
T ss_pred CceEEEEEc--cceEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCC---------------
Confidence 456666664 45688887754 99999999999988864 4455666666677778887652
Q ss_pred CCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCe-EEEEECCCCeeEEEEccCC--
Q psy9327 87 EPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQT-IRIWYWQSRNCICVLTGHN-- 163 (641)
Q Consensus 87 ~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~-I~vWd~~~~~~i~~l~~h~-- 163 (641)
...|.|.+||..+-+++.++..|.+++.+++|+++|.++|+||+.|+ |||+.+.+|+.+..|+.-.
T Consensus 150 -----------~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~ 218 (391)
T KOG2110|consen 150 -----------TTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYP 218 (391)
T ss_pred -----------CCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCcee
Confidence 26789999999999999999999999999999999999999999997 7999999999999997433
Q ss_pred CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCc
Q psy9327 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196 (641)
Q Consensus 164 ~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~ 196 (641)
..|.+++|||++.+|.+.|..++|+||.+....
T Consensus 219 ~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~~ 251 (391)
T KOG2110|consen 219 VSIYSLSFSPDSQFLAASSNTETVHIFKLEKVS 251 (391)
T ss_pred eEEEEEEECCCCCeEEEecCCCeEEEEEecccc
Confidence 357899999999999999999999999987643
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.5e-13 Score=152.83 Aligned_cols=251 Identities=12% Similarity=0.172 Sum_probs=173.5
Q ss_pred CceeeccCCCCeEEEEEccCC-CeEEEEeCCCcEEEEECccCc-------ccccccccccCeEEEEEeCCCCEEEEecee
Q psy9327 1 MLTKFETKSARVKGLSFHPKR-PWILSSLHNGVIQLWDYRMNT-------LLEKFDEHEGPVRGICFHNQQPIFVSGGKM 72 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg-~~Lasg~~dg~I~iWD~~~~~-------~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~ 72 (641)
++.+++.|++.|..++.++.. .++++||.||+|++||.+.-. ...++..-.+++.++.+.+.+..+|+|++.
T Consensus 1040 lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~D 1119 (1431)
T KOG1240|consen 1040 LVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKD 1119 (1431)
T ss_pred EeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCC
Confidence 467899999999999998765 999999999999999986421 122333357899999999999999999854
Q ss_pred eEEeee-----------------------ceeeeccc-CC-cceeeEEEeeCCCeEEEEECCCCeeEEEEc--cCCCCeE
Q psy9327 73 IVMAYQ-----------------------GCILESRN-EP-CLFRIKSVLGDDYKIKVWNYKQRKCIFTLL--GHLDYIR 125 (641)
Q Consensus 73 ~~~~~~-----------------------~~~~~~~~-~~-~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~--~h~~~V~ 125 (641)
+.+.+- |++..-.. .. .....++.+..-+.|..||.++..-..+++ ...|.|+
T Consensus 1120 G~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vT 1199 (1431)
T KOG1240|consen 1120 GSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVT 1199 (1431)
T ss_pred CeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCcccccee
Confidence 433331 11100000 00 001255677788899999999876665544 3568999
Q ss_pred EEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc-cCCCCEEEEEEecCC---CEEEEEe--CCCeEEEEecCCCceee
Q psy9327 126 TTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT-GHNHYVMCAQFHPTD---DIVVSAS--LDQTIRVWDISGLRKKN 199 (641)
Q Consensus 126 ~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~-~h~~~V~sl~fsp~g---~~lvSgs--~DgtI~IWD~~~~~~~~ 199 (641)
+++.+|.++|++.|+..|.+.+||++-+.++..+. ++..+++.+..+|-. ...++++ ..+.|.+|++.++.+..
T Consensus 1200 Si~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~ 1279 (1431)
T KOG1240|consen 1200 SIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQT 1279 (1431)
T ss_pred EEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcceE
Confidence 99999999999999999999999999998887764 456788888888743 4555554 46789999999998777
Q ss_pred eccCC-Cceeeeccc-------CCCceeee-------eeeeeeCCCeeEEEecCCCcceeeecCCcc
Q psy9327 200 VAPGM-GKLVLSMKS-------KHPIWKYC-------KPVKYCNPKHTLHICNRKMEPLCNIHENTR 251 (641)
Q Consensus 200 ~~~~~-~~~v~s~~~-------~~~v~~~~-------~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~ 251 (641)
++... +...++-.. .+++-... .-+.++++|..|+.||............++
T Consensus 1280 vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~ 1346 (1431)
T KOG1240|consen 1280 VLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGP 1346 (1431)
T ss_pred EEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCc
Confidence 66533 222222110 01111100 115677788889999888766555333433
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.9e-13 Score=143.29 Aligned_cols=189 Identities=12% Similarity=0.155 Sum_probs=130.7
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEee---
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAY--- 77 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~--- 77 (641)
++.++++|++.|.|++|+.||+++|||+.|..|.+|.-.-. -+-++ .|...|.|+.|+|-...+++++-.-...|
T Consensus 45 llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klE-G~LkY-SH~D~IQCMsFNP~~h~LasCsLsdFglWS~~ 122 (1081)
T KOG1538|consen 45 LLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLE-GILKY-SHNDAIQCMSFNPITHQLASCSLSDFGLWSPE 122 (1081)
T ss_pred cccccccccceEEEEEEccCCceeccCCCceeEEEeccccc-ceeee-ccCCeeeEeecCchHHHhhhcchhhccccChh
Confidence 46789999999999999999999999999999999985422 22333 58888888988888888888762111111
Q ss_pred --------eceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc---cCCCCeEEEEEcc---------------
Q psy9327 78 --------QGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL---GHLDYIRTTFFHH--------------- 131 (641)
Q Consensus 78 --------~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~---~h~~~V~~v~fsp--------------- 131 (641)
......++.|.+...+++.|-.||+|.+-+- +|++.-.++ |.+.+|.+++|+|
T Consensus 123 qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk-~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW 201 (1081)
T KOG1538|consen 123 QKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNK-NGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADW 201 (1081)
T ss_pred hhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecC-CCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEec
Confidence 1122344556666677777777777777653 333322222 2445555555554
Q ss_pred -------------------------------CCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEE
Q psy9327 132 -------------------------------EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180 (641)
Q Consensus 132 -------------------------------~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvS 180 (641)
+|.+++.||.|+.++++- +.|-.+.++-.....|.+++.+|++..++.
T Consensus 202 ~qTLSFy~LsG~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~ 280 (1081)
T KOG1538|consen 202 GQTLSFYQLSGKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKPNSQYVVV 280 (1081)
T ss_pred cceeEEEEecceeecccccCCCCchhheeccCCcEEEEccCCCceEEEe-ecCeEEeeccccceeEEEEEEccCCceEEE
Confidence 444555555555555554 334444555556778999999999999999
Q ss_pred EeCCCeEEEEecC
Q psy9327 181 ASLDQTIRVWDIS 193 (641)
Q Consensus 181 gs~DgtI~IWD~~ 193 (641)
|+.||||.-|++-
T Consensus 281 GCqDGTiACyNl~ 293 (1081)
T KOG1538|consen 281 GCQDGTIACYNLI 293 (1081)
T ss_pred EEccCeeehhhhH
Confidence 9999999999874
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.1e-12 Score=129.35 Aligned_cols=228 Identities=12% Similarity=0.110 Sum_probs=155.1
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEece--e--e-EEee-ece
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK--M--I-VMAY-QGC 80 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~--~--~-~~~~-~~~ 80 (641)
+....+..+.|+.+...|..|+.|| -+++....-............|--+-|+.+ +++..+. . . .+.. .++
T Consensus 3 ~~~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFSSS--LvaiV~~~qpr~Lkv~~~Kk~~ 79 (391)
T KOG2110|consen 3 GKKPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFSSS--LVAIVSIKQPRKLKVVHFKKKT 79 (391)
T ss_pred CCCcceeeeeeccceeEEEccCCCc-eeEEecCchHHhhcccCCCeEEEEeecccc--eeEEEecCCCceEEEEEcccCc
Confidence 4556788888999999999999998 678876544332222222334555556543 3333331 1 0 1111 122
Q ss_pred eeecccCCcc-------eeeEEEeeCCCeEEEEECCCCeeEEEEcc---CCCCeEEEEEccCCCEEEEE--eCCCeEEEE
Q psy9327 81 ILESRNEPCL-------FRIKSVLGDDYKIKVWNYKQRKCIFTLLG---HLDYIRTTFFHHEYPWILSA--SDDQTIRIW 148 (641)
Q Consensus 81 ~~~~~~~~~~-------~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~---h~~~V~~v~fsp~~~~l~sg--s~Dg~I~vW 148 (641)
+.+....|.. ...++++..+. |.|||+++.++++++.. +...+.++.+++.+.+++-- -+.|.|.+|
T Consensus 80 ~ICe~~fpt~IL~VrmNr~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~ 158 (391)
T KOG2110|consen 80 TICEIFFPTSILAVRMNRKRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLF 158 (391)
T ss_pred eEEEEecCCceEEEEEccceEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEE
Confidence 3333322221 12333444554 99999999999998864 44456666666677788853 346899999
Q ss_pred ECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCe-EEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeee
Q psy9327 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQT-IRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYC 227 (641)
Q Consensus 149 d~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~Dgt-I~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~ 227 (641)
|..+-+....+..|.+.+-+++|+|+|.+|+|||+.|| |||+.+.+++....+..-
T Consensus 159 d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG----------------------- 215 (391)
T KOG2110|consen 159 DTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRG----------------------- 215 (391)
T ss_pred EcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCC-----------------------
Confidence 99999999999999999999999999999999999997 799999998887777521
Q ss_pred CCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCC
Q psy9327 228 NPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 228 ~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~ 280 (641)
.. ...|.+++|+|++.+|.++++.+.+.++..+.
T Consensus 216 -------------~~------~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 216 -------------TY------PVSIYSLSFSPDSQFLAASSNTETVHIFKLEK 249 (391)
T ss_pred -------------ce------eeEEEEEEECCCCCeEEEecCCCeEEEEEecc
Confidence 10 24566778888888887777777777665443
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.3e-14 Score=146.72 Aligned_cols=172 Identities=15% Similarity=0.259 Sum_probs=142.9
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECcc----------CcccccccccccCeEEEEEeCCCCEEEEece
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRM----------NTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~----------~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~ 71 (641)
+.+|.+|.++|.|+++.+++..+++||.||+|+.|++.. ......+.+|.+.|..+++|+....|++++
T Consensus 337 i~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs- 415 (577)
T KOG0642|consen 337 ILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCS- 415 (577)
T ss_pred eEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeec-
Confidence 568999999999999999999999999999999996541 134456789999999999999988899987
Q ss_pred eeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee--------------------------------------
Q psy9327 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC-------------------------------------- 113 (641)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~-------------------------------------- 113 (641)
.||+++.|+.....+
T Consensus 416 ---------------------------~DgTvr~w~~~~~~~~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~ 468 (577)
T KOG0642|consen 416 ---------------------------SDGTVRLWEPTEESPCTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDD 468 (577)
T ss_pred ---------------------------CCceEEeeccCCcCccccCCccccCCcceEeeccchhHhhhhhcccccccchh
Confidence 788888887643322
Q ss_pred ------EEEEcc-------CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEE
Q psy9327 114 ------IFTLLG-------HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180 (641)
Q Consensus 114 ------~~~~~~-------h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvS 180 (641)
+..+.. ....+.-+.++|++++.+++..|++|+++|..++..++....|...++++++.|+|.+|.+
T Consensus 469 ~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s 548 (577)
T KOG0642|consen 469 MEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMS 548 (577)
T ss_pred hhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccchheeeccceecceeecCCCceEEe
Confidence 011110 0123566788999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCeEEEEecCCCceeeec
Q psy9327 181 ASLDQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 181 gs~DgtI~IWD~~~~~~~~~~ 201 (641)
++.|+.+++|.+....+....
T Consensus 549 ~s~d~sv~l~kld~k~~~~es 569 (577)
T KOG0642|consen 549 GSHDGSVRLWKLDVKTCVLES 569 (577)
T ss_pred ecCCceeehhhccchheeecc
Confidence 999999999998775554443
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.1e-13 Score=131.94 Aligned_cols=234 Identities=18% Similarity=0.266 Sum_probs=167.2
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc------cccccc-------cccCeEEEEEe-------CCCCEEEEe
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL------LEKFDE-------HEGPVRGICFH-------NQQPIFVSG 69 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~------l~~~~~-------h~~~V~~i~fs-------p~~~~l~sg 69 (641)
.-.+++.|+|||..|++-+.|..+.+|++...-. ..-+.. ....|..-+|- |+..+++++
T Consensus 50 nf~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~s 129 (406)
T KOG2919|consen 50 NFLKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVS 129 (406)
T ss_pred hhhccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeec
Confidence 3467889999999999999999999999852110 000111 12345555553 555566666
Q ss_pred ceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc--CCCC---eEEEEEccCCCEEEEEeCCCe
Q psy9327 70 GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG--HLDY---IRTTFFHHEYPWILSASDDQT 144 (641)
Q Consensus 70 s~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~--h~~~---V~~v~fsp~~~~l~sgs~Dg~ 144 (641)
+ .+.-|++||.-+|+....+.+ |.+. -.+++|+|||..|++|. ...
T Consensus 130 s----------------------------r~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krc 180 (406)
T KOG2919|consen 130 S----------------------------RDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRC 180 (406)
T ss_pred c----------------------------ccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecc-cce
Confidence 5 899999999999998877754 5544 45799999999888765 689
Q ss_pred EEEEEC-CCCeeEE---EE----ccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCC
Q psy9327 145 IRIWYW-QSRNCIC---VL----TGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKH 215 (641)
Q Consensus 145 I~vWd~-~~~~~i~---~l----~~h~~~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~ 215 (641)
|+++|. +.++-.. ++ .+..+-+.|++|||.. ..++.|+..+++-|+....+.....+-+
T Consensus 181 irvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llgg------------ 248 (406)
T KOG2919|consen 181 IRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGG------------ 248 (406)
T ss_pred EEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecc------------
Confidence 999999 5554221 11 1346778999999955 5899999999999998877665555443
Q ss_pred CceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEec-CCeEEEEEcCCCCeEecccc------
Q psy9327 216 PIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIRTLDL------ 288 (641)
Q Consensus 216 ~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s-~~~k~~l~~~~~g~I~~~d~------ 288 (641)
+...|+.+.|.++|..|++|. .+-++..|+.....-.++.+
T Consensus 249 --------------------------------h~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~ 296 (406)
T KOG2919|consen 249 --------------------------------HGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGD 296 (406)
T ss_pred --------------------------------cCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccC
Confidence 357788899999999999998 46677777654322111111
Q ss_pred -c---eEEEEEcCcEEEEEeCCCCeEEEEeCC
Q psy9327 289 -P---IYITKIKGNQVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 289 -p---~~~~~~~g~~v~~~~~dg~i~v~~~~~ 316 (641)
. .+-....++.+.+++.||.|++|+.+.
T Consensus 297 TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~ 328 (406)
T KOG2919|consen 297 TNQRILFDLDPKGEILASGDTDGSVRVWDLKD 328 (406)
T ss_pred ccceEEEecCCCCceeeccCCCccEEEEecCC
Confidence 1 111335688999999999999999886
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.2e-13 Score=140.48 Aligned_cols=186 Identities=11% Similarity=0.170 Sum_probs=144.3
Q ss_pred EEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCccee
Q psy9327 13 KGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFR 92 (641)
Q Consensus 13 ~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~ 92 (641)
.+++|+++|..+++|+.||++|+|++.+...+.....|.+.|.++.|+||+..|++-+
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig---------------------- 205 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIG---------------------- 205 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEec----------------------
Confidence 7899999999999999999999999988888888889999999999999999999998
Q ss_pred eEEEeeCCCeEEEEECCCCeeEEEEcc--CCCCeEEEEEccCC-----CEEEEEeCCCeEEEEECCCCe-----eEEEEc
Q psy9327 93 IKSVLGDDYKIKVWNYKQRKCIFTLLG--HLDYIRTTFFHHEY-----PWILSASDDQTIRIWYWQSRN-----CICVLT 160 (641)
Q Consensus 93 ~~~~~s~Dg~I~vWD~~t~~~~~~~~~--h~~~V~~v~fsp~~-----~~l~sgs~Dg~I~vWd~~~~~-----~i~~l~ 160 (641)
.| ..+||+.++|.++..... -+.....|.|+.++ ..+++...-+.|+.||+.... ..++..
T Consensus 206 ------~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~ 278 (398)
T KOG0771|consen 206 ------AD-SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKI 278 (398)
T ss_pred ------CC-ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhh
Confidence 77 899999999977766653 22345678888776 233444445566665543211 111222
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCC
Q psy9327 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKM 240 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~ 240 (641)
.-...|++++.+++|++++.|+.||.|.|++..+.++.+..+.
T Consensus 279 ~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~------------------------------------- 321 (398)
T KOG0771|consen 279 KRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKE------------------------------------- 321 (398)
T ss_pred hccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehh-------------------------------------
Confidence 2334799999999999999999999999999988776655542
Q ss_pred cceeeecCCcceEEEEEcCCccEEEEecCC
Q psy9327 241 EPLCNIHENTRVKSGAWDESGVFIYTTSNH 270 (641)
Q Consensus 241 ~~~~~~~~~~~I~sla~~p~g~~L~t~s~~ 270 (641)
.|...|+.+.|+|+.+++++.+.+
T Consensus 322 ------aH~~~VT~ltF~Pdsr~~~svSs~ 345 (398)
T KOG0771|consen 322 ------AHLGFVTGLTFSPDSRYLASVSSD 345 (398)
T ss_pred ------hheeeeeeEEEcCCcCcccccccC
Confidence 134578899999998888876644
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.1e-14 Score=134.81 Aligned_cols=158 Identities=20% Similarity=0.303 Sum_probs=127.2
Q ss_pred cCCCCeEEEEEcc-CCC--eEEEEeCCCcEEEEECccC----------cccccccccccCeEEEEEeCCCCEEEEeceee
Q psy9327 7 TKSARVKGLSFHP-KRP--WILSSLHNGVIQLWDYRMN----------TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMI 73 (641)
Q Consensus 7 ~H~~~V~~l~fsp-dg~--~Lasg~~dg~I~iWD~~~~----------~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~ 73 (641)
+..+.+.|..+.. ++. ++++|-.+|.|.+||+.++ +.......|..+|.++.|.+.-..=++|+
T Consensus 148 ~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgg--- 224 (323)
T KOG0322|consen 148 SKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGG--- 224 (323)
T ss_pred cccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCC---
Confidence 3456777777543 232 5677888999999999987 34444567999999999987655556666
Q ss_pred EEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC--ee--EEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEE
Q psy9327 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR--KC--IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149 (641)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~--~~--~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd 149 (641)
.+..+..|++... .+ -....-..-.|..+..-||++.++++|+|+.|+||+
T Consensus 225 -------------------------a~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVys 279 (323)
T KOG0322|consen 225 -------------------------ADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYS 279 (323)
T ss_pred -------------------------ccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEE
Confidence 7778889988643 22 112222445788899999999999999999999999
Q ss_pred CCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEec
Q psy9327 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192 (641)
Q Consensus 150 ~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~ 192 (641)
+++.+++..++-|.+.|++++|+|+..+++.||.|++|.+|++
T Consensus 280 wrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 280 WRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred eccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 9999999999999999999999999999999999999999986
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.4e-13 Score=141.10 Aligned_cols=210 Identities=16% Similarity=0.164 Sum_probs=161.5
Q ss_pred CeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCC
Q psy9327 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDY 101 (641)
Q Consensus 22 ~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg 101 (641)
..++.++.||.+.|-+ +.++.-+..+.|.+.|.+-.|+|+|.-|+++| .||
T Consensus 76 d~~~i~s~DGkf~il~-k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~G----------------------------EDG 126 (737)
T KOG1524|consen 76 DTLLICSNDGRFVILN-KSARVERSISAHAAAISSGRWSPDGAGLLTAG----------------------------EDG 126 (737)
T ss_pred ceEEEEcCCceEEEec-ccchhhhhhhhhhhhhhhcccCCCCceeeeec----------------------------CCc
Confidence 4688889999999988 56777788899999999999999999999998 999
Q ss_pred eEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEE
Q psy9327 102 KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSA 181 (641)
Q Consensus 102 ~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSg 181 (641)
.|++|. ++|-...++-....+|+|++|.|+..-++-+.. +.+.|=.+.....+-..++|.+-|.++.|+|..++++||
T Consensus 127 ~iKiWS-rsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g-~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sg 204 (737)
T KOG1524|consen 127 VIKIWS-RSGMLRSTVVQNEESIRCARWAPNSNSIVFCQG-GHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASG 204 (737)
T ss_pred eEEEEe-ccchHHHHHhhcCceeEEEEECCCCCceEEecC-CeEEEeecccccceeEEeccCcEEEEeecCccccceeec
Confidence 999999 567666666667789999999998775554432 455555566566677889999999999999999999999
Q ss_pred eCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCc
Q psy9327 182 SLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESG 261 (641)
Q Consensus 182 s~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g 261 (641)
+.|-..+|||-.+..... +-.+..+|++++|.|+
T Consensus 205 GED~kfKvWD~~G~~Lf~---------------------------------------------S~~~ey~ITSva~npd- 238 (737)
T KOG1524|consen 205 GEDFRFKIWDAQGANLFT---------------------------------------------SAAEEYAITSVAFNPE- 238 (737)
T ss_pred CCceeEEeecccCccccc---------------------------------------------CChhccceeeeeeccc-
Confidence 999999999986522111 1125689999999999
Q ss_pred cEEEEecCCeEEEEEcCCCCeEeccccceEEEEEcCcEEEEEeCCCCeEEEEe
Q psy9327 262 VFIYTTSNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRI 314 (641)
Q Consensus 262 ~~L~t~s~~~k~~l~~~~~g~I~~~d~p~~~~~~~g~~v~~~~~dg~i~v~~~ 314 (641)
...+.+| .....+.....|.|..+ .|..+|..+.++...|.+.+...
T Consensus 239 ~~~~v~S-~nt~R~~~p~~GSifnl-----sWS~DGTQ~a~gt~~G~v~~A~~ 285 (737)
T KOG1524|consen 239 KDYLLWS-YNTARFSSPRVGSIFNL-----SWSADGTQATCGTSTGQLIVAYA 285 (737)
T ss_pred cceeeee-eeeeeecCCCccceEEE-----EEcCCCceeeccccCceEEEeee
Confidence 3333333 33344555556666533 35668899999998888776544
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.1e-12 Score=143.67 Aligned_cols=238 Identities=15% Similarity=0.167 Sum_probs=160.4
Q ss_pred CCCeEEEEEccC-CCeEEEEeCCCcEEEEECccCcc--cccc----cccccCeEEEEEeCCC--CEEEEeceeeEEeeec
Q psy9327 9 SARVKGLSFHPK-RPWILSSLHNGVIQLWDYRMNTL--LEKF----DEHEGPVRGICFHNQQ--PIFVSGGKMIVMAYQG 79 (641)
Q Consensus 9 ~~~V~~l~fspd-g~~Lasg~~dg~I~iWD~~~~~~--l~~~----~~h~~~V~~i~fsp~~--~~l~sgs~~~~~~~~~ 79 (641)
.+.|.|+.|+|. .++++.|..+|+|.+||.+.+.. ...+ ..|..+|..+.|-.+- .-|++++
T Consensus 242 ~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~s--------- 312 (555)
T KOG1587|consen 242 PSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLS--------- 312 (555)
T ss_pred CCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEe---------
Confidence 467999999995 55777888899999999987654 2222 3588999999997643 3488887
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCee-EE-----EEc------cCCCCeEEEEEccCCC-EEEEEeCCCeEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC-IF-----TLL------GHLDYIRTTFFHHEYP-WILSASDDQTIR 146 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~-~~-----~~~------~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~ 146 (641)
.||.|..|+++.-.. .. ... .-...+++++|++..+ .|+.|+++|.|.
T Consensus 313 -------------------sDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~ 373 (555)
T KOG1587|consen 313 -------------------SDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVY 373 (555)
T ss_pred -------------------cCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEE
Confidence 899999999875432 11 111 1123688999999655 789999999998
Q ss_pred EEECCCCe--------eEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecC-CCceeeeccCCCceeeecccCCCc
Q psy9327 147 IWYWQSRN--------CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GLRKKNVAPGMGKLVLSMKSKHPI 217 (641)
Q Consensus 147 vWd~~~~~--------~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~-~~~~~~~~~~~~~~v~s~~~~~~v 217 (641)
--+....+ ....+..|.++|+++.++|=+..++..+.|-+++||.-. ....+..+.....++.... ..|+
T Consensus 374 ~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~va-WSpt 452 (555)
T KOG1587|consen 374 KGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVA-WSPT 452 (555)
T ss_pred EEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeE-EcCc
Confidence 74433222 234566789999999999977655555559999999887 4333333333333333211 1111
Q ss_pred eeeeeeeeeeCCCeeEEEec---CCCcceeeecC-CcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 218 WKYCKPVKYCNPKHTLHICN---RKMEPLCNIHE-NTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 218 ~~~~~~l~s~~~d~~I~i~d---~~~~~~~~~~~-~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
... -++++..+|.+.+|| ....++.+... ....+.+.|++.|..|+.|...|.+.++.
T Consensus 453 rpa--vF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~ 514 (555)
T KOG1587|consen 453 RPA--VFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILK 514 (555)
T ss_pred Cce--EEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEE
Confidence 111 166788999999999 33444444433 45566677888888888877666655554
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.1e-12 Score=132.79 Aligned_cols=240 Identities=10% Similarity=0.137 Sum_probs=156.9
Q ss_pred CCCeEEEEEccCCCeEEEEe-CCCcEEEEECc-cCcc--cccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 9 SARVKGLSFHPKRPWILSSL-HNGVIQLWDYR-MNTL--LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~-~dg~I~iWD~~-~~~~--l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
.+....++++|++++|++++ .++.|.+|++. +++. +... ...+....++|+|+++++++++.
T Consensus 34 ~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~-~~~~~p~~i~~~~~g~~l~v~~~------------- 99 (330)
T PRK11028 34 PGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAES-PLPGSPTHISTDHQGRFLFSASY------------- 99 (330)
T ss_pred CCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeee-cCCCCceEEEECCCCCEEEEEEc-------------
Confidence 35677899999999887765 48889999986 3332 2222 23345678999999999998872
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCC-C---eeEEEEccCCCCeEEEEEccCCCEEE-EEeCCCeEEEEECCCCeeEE--
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQ-R---KCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWYWQSRNCIC-- 157 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t-~---~~~~~~~~h~~~V~~v~fsp~~~~l~-sgs~Dg~I~vWd~~~~~~i~-- 157 (641)
.++.|.+||+.+ + +.+..+. +.....+++++|++++++ +...++.|.+||+.+...+.
T Consensus 100 --------------~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~ 164 (330)
T PRK11028 100 --------------NANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQ 164 (330)
T ss_pred --------------CCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCccccc
Confidence 689999999974 3 2333333 334467789999998875 45567999999997633221
Q ss_pred -----EEccCCCCEEEEEEecCCCEEEEEeC-CCeEEEEecCCC--ce--eeeccCCCceeeecccCCCceeeeeeeeee
Q psy9327 158 -----VLTGHNHYVMCAQFHPTDDIVVSASL-DQTIRVWDISGL--RK--KNVAPGMGKLVLSMKSKHPIWKYCKPVKYC 227 (641)
Q Consensus 158 -----~l~~h~~~V~sl~fsp~g~~lvSgs~-DgtI~IWD~~~~--~~--~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~ 227 (641)
... .....+.+.|+|+|+++++++. +++|.+||+... +. ...+.. .|
T Consensus 165 ~~~~~~~~-~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~-----------~p----------- 221 (330)
T PRK11028 165 EPAEVTTV-EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDM-----------MP----------- 221 (330)
T ss_pred CCCceecC-CCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEec-----------CC-----------
Confidence 111 1234678999999999988876 899999999742 11 111100 00
Q ss_pred CCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEec-CCeEEEEEcCC--CCeEe---ccc---cce-EEEEEcC
Q psy9327 228 NPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTS-NHIKYAIVNGD--HGIIR---TLD---LPI-YITKIKG 297 (641)
Q Consensus 228 ~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s-~~~k~~l~~~~--~g~I~---~~d---~p~-~~~~~~g 297 (641)
. . .........+.++|+|++++++. .+..+.+|+-+ .+... ... .|- ..+..+|
T Consensus 222 -~---------~------~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg 285 (330)
T PRK11028 222 -A---------D------FSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSG 285 (330)
T ss_pred -C---------c------CCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCC
Confidence 0 0 00111233588999999999986 35677777642 22221 111 121 1244678
Q ss_pred cEEEEEeC-CCCeEEEEeCC
Q psy9327 298 NQVYYLDR-ECSPHVLRIDP 316 (641)
Q Consensus 298 ~~v~~~~~-dg~i~v~~~~~ 316 (641)
..+++.++ ++.+.+|.++.
T Consensus 286 ~~l~va~~~~~~v~v~~~~~ 305 (330)
T PRK11028 286 KYLIAAGQKSHHISVYEIDG 305 (330)
T ss_pred CEEEEEEccCCcEEEEEEcC
Confidence 88888775 88999999874
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=9e-14 Score=146.04 Aligned_cols=205 Identities=15% Similarity=0.250 Sum_probs=165.2
Q ss_pred cCCCCeEEEEEccCCCeEEEEeC---CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLH---NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~---dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
.|...|+.+.||.+|.||++... +..|.|+++.......-|+-..+.|.++.|||..++|+++.
T Consensus 519 ~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaT------------- 585 (733)
T KOG0650|consen 519 KHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVAT------------- 585 (733)
T ss_pred ecCCccceeeeecCCceEEEeccCCCcceEEEEecccccccCchhhcCCceeEEEecCCCceEEEEe-------------
Confidence 57889999999999999998765 35699999988777777877889999999999999999984
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC-eeEEEEccC
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICVLTGH 162 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~-~~i~~l~~h 162 (641)
...|++||+..+..+.++......|..++.||.|..++.|+.|+.+..+|+.-. ++..++.-|
T Consensus 586 ----------------q~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H 649 (733)
T KOG0650|consen 586 ----------------QRSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLH 649 (733)
T ss_pred ----------------ccceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhh
Confidence 678999999988877777777788999999999999999999999999999754 567788899
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcc
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEP 242 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~ 242 (641)
...+++++||+.-++++|||.||++.|+--.-..-... +| -..+
T Consensus 650 ~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~q--------------np----------------------liVP 693 (733)
T KOG0650|consen 650 EKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQ--------------NP----------------------LIVP 693 (733)
T ss_pred hhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhc--------------CC----------------------ceEe
Confidence 99999999999999999999999999984321110000 00 0011
Q ss_pred eeee-----cCCcceEEEEEcCCccEEEEecCCeEEEEE
Q psy9327 243 LCNI-----HENTRVKSGAWDESGVFIYTTSNHIKYAIV 276 (641)
Q Consensus 243 ~~~~-----~~~~~I~sla~~p~g~~L~t~s~~~k~~l~ 276 (641)
+..+ .....|..+.|+|...+|++++.++.+.+|
T Consensus 694 lK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 694 LKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred eeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 1111 124567888999999999998888777766
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.1e-13 Score=133.93 Aligned_cols=132 Identities=20% Similarity=0.383 Sum_probs=113.4
Q ss_pred ccCeEEEEEeCCCC-EEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe---------eEEEEccC
Q psy9327 51 EGPVRGICFHNQQP-IFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK---------CIFTLLGH 120 (641)
Q Consensus 51 ~~~V~~i~fsp~~~-~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~---------~~~~~~~h 120 (641)
..+|..+.|+++.. .+++|| .|..|++|-+..+. .+..+..|
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G----------------------------~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H 64 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAG----------------------------GDKDIRIWKVNRSEPGGGDMKVEYLSSLSRH 64 (434)
T ss_pred CCceEEEEeccCcccceeccc----------------------------CccceeeeeeeecCCCCCceeEEEeecccCC
Confidence 35889999998766 888988 99999999876432 34567789
Q ss_pred CCCeEEEEEccCCCEEEEEeCCCeEEEEECC--------C--------CeeEEEEccCCCCEEEEEEecCCCEEEEEeCC
Q psy9327 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQ--------S--------RNCICVLTGHNHYVMCAQFHPTDDIVVSASLD 184 (641)
Q Consensus 121 ~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~--------~--------~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~D 184 (641)
...|+++.|+|+|..++||+++|.|.+|-.. + ......+.+|...|..++|+|++..+++++.|
T Consensus 65 ~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~d 144 (434)
T KOG1009|consen 65 TRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVD 144 (434)
T ss_pred cceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeecc
Confidence 9999999999999999999999999999765 2 22345678999999999999999999999999
Q ss_pred CeEEEEecCCCceeeeccCCCceeee
Q psy9327 185 QTIRVWDISGLRKKNVAPGMGKLVLS 210 (641)
Q Consensus 185 gtI~IWD~~~~~~~~~~~~~~~~v~s 210 (641)
.++++||+..++....+.+|.+++.-
T Consensus 145 ns~~l~Dv~~G~l~~~~~dh~~yvqg 170 (434)
T KOG1009|consen 145 NSVRLWDVHAGQLLAILDDHEHYVQG 170 (434)
T ss_pred ceEEEEEeccceeEeeccccccccce
Confidence 99999999999999999888766653
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=9e-13 Score=146.26 Aligned_cols=269 Identities=17% Similarity=0.197 Sum_probs=188.2
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccccc---ccCeEEEEEeC--CCCEEEEeceee-EEeeeceee
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEH---EGPVRGICFHN--QQPIFVSGGKMI-VMAYQGCIL 82 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h---~~~V~~i~fsp--~~~~l~sgs~~~-~~~~~~~~~ 82 (641)
...-..+.|||-.+.++++...-.|++||++.++.+..|..+ ...|+.+.+-. |..++++|+..+ +..|.....
T Consensus 1064 ~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~ 1143 (1387)
T KOG1517|consen 1064 NQPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYAD 1143 (1387)
T ss_pred CCCCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEeccccc
Confidence 345678899999999999998889999999999999998764 45788888865 445666665322 222211000
Q ss_pred -------------------------ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc-CCCCeEEEEEcc-CCCE
Q psy9327 83 -------------------------ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG-HLDYIRTTFFHH-EYPW 135 (641)
Q Consensus 83 -------------------------~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~-h~~~V~~v~fsp-~~~~ 135 (641)
....|.+....+.++++-..|+|||....+....+.. ....|+++.-+- .|+.
T Consensus 1144 ~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~ 1223 (1387)
T KOG1517|consen 1144 KWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNI 1223 (1387)
T ss_pred ccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCce
Confidence 1112333344555677788999999998877766543 344566664433 4789
Q ss_pred EEEEeCCCeEEEEECCCCe---eEEEEccCCCC--EEEEEEecCCC-EEEEEeCCCeEEEEecCCCceeeeccC--C---
Q psy9327 136 ILSASDDQTIRIWYWQSRN---CICVLTGHNHY--VMCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKNVAPG--M--- 204 (641)
Q Consensus 136 l~sgs~Dg~I~vWd~~~~~---~i~~l~~h~~~--V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~~~~~~~~~~--~--- 204 (641)
+++|..||.|++||.+... .+...+.|++. |..+.+.+.|- .|+|||.||.|++||++.......+.. +
T Consensus 1224 i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~y 1303 (1387)
T KOG1517|consen 1224 IAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEY 1303 (1387)
T ss_pred EEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeecccc
Confidence 9999999999999987543 46778889988 99999999775 599999999999999998533322221 1
Q ss_pred CceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecC--------CcceEEEEEcCCccEEEEecCCeEEEEE
Q psy9327 205 GKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHE--------NTRVKSGAWDESGVFIYTTSNHIKYAIV 276 (641)
Q Consensus 205 ~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~--------~~~I~sla~~p~g~~L~t~s~~~k~~l~ 276 (641)
|..+.+ ...|+.-.+ +++|+. +.|+||+..++++..+.. ...+.+++|+|....++.|+.|..+.++
T Consensus 1304 Gs~lTa-l~VH~hapi---iAsGs~-q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iY 1378 (1387)
T KOG1517|consen 1304 GSALTA-LTVHEHAPI---IASGSA-QLIKIYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIY 1378 (1387)
T ss_pred Ccccee-eeeccCCCe---eeecCc-ceEEEEecChhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEe
Confidence 111111 112221111 455555 999999977766555432 4567899999999999999999999998
Q ss_pred cCCCCe
Q psy9327 277 NGDHGI 282 (641)
Q Consensus 277 ~~~~g~ 282 (641)
..+.+.
T Consensus 1379 s~~k~~ 1384 (1387)
T KOG1517|consen 1379 SCEKPR 1384 (1387)
T ss_pred ecCCcC
Confidence 876543
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.4e-13 Score=143.29 Aligned_cols=152 Identities=19% Similarity=0.280 Sum_probs=124.8
Q ss_pred EccCCCeEEE--EeCCCcEEEEECcc-Ccccccc-c--ccccCeEEEEEeC-CCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 17 FHPKRPWILS--SLHNGVIQLWDYRM-NTLLEKF-D--EHEGPVRGICFHN-QQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 17 fspdg~~Las--g~~dg~I~iWD~~~-~~~l~~~-~--~h~~~V~~i~fsp-~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
|+.+..++|+ ++.-|.|-|+++.. |++-... . -....|+.+.|.| |...|++++
T Consensus 587 fcan~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~------------------- 647 (1012)
T KOG1445|consen 587 FCANNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVAT------------------- 647 (1012)
T ss_pred eeeccceEEEEecCCCceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecc-------------------
Confidence 4445556653 34568999999864 3322111 1 2456899999999 667888887
Q ss_pred ceeeEEEeeCCCeEEEEECCCC-------eeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeeEEEEcc
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQR-------KCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~-------~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~ 161 (641)
+||.|++|.+..+ ++...+..|.+.|+.+.||| -...|++++.|-+|++||+++.+....|.+
T Consensus 648 ---------ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~g 718 (1012)
T KOG1445|consen 648 ---------DDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVG 718 (1012)
T ss_pred ---------cCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheecc
Confidence 9999999998654 45667889999999999999 456799999999999999999999999999
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCc
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~ 196 (641)
|.+.|..++|+|+|+.+++.+.||++++|+-+++.
T Consensus 719 HtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e 753 (1012)
T KOG1445|consen 719 HTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSRE 753 (1012)
T ss_pred CcCceeEEEECCCCcceeeeecCceEEEeCCCCCC
Confidence 99999999999999999999999999999998754
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.7e-14 Score=154.65 Aligned_cols=244 Identities=21% Similarity=0.251 Sum_probs=171.7
Q ss_pred cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCC
Q psy9327 42 TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL 121 (641)
Q Consensus 42 ~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~ 121 (641)
+.++.+.+|-..|.|+.|...|.++++|+ +|..++||..+++.++....||.
T Consensus 181 k~ikrLlgH~naVyca~fDrtg~~Iitgs----------------------------dd~lvKiwS~et~~~lAs~rGhs 232 (1113)
T KOG0644|consen 181 KNIKRLLGHRNAVYCAIFDRTGRYIITGS----------------------------DDRLVKIWSMETARCLASCRGHS 232 (1113)
T ss_pred HHHHHHHhhhhheeeeeeccccceEeecC----------------------------ccceeeeeeccchhhhccCCCCc
Confidence 44566778999999999999999999998 99999999999999999999999
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeec
Q psy9327 122 DYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 122 ~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~ 201 (641)
+.++.++.+.+.-+++++|.|..|++|-++++.++..+.||++.|++++|+|-. +.+.||++++||++ ...+...
T Consensus 233 ~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r-~~~~~y~ 307 (1113)
T KOG0644|consen 233 GDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDAR-LEPRIYV 307 (1113)
T ss_pred cccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhccccceeeeccCccc----cCCCCCceEecccc-ccccccC
Confidence 999999999999999999999999999999999999999999999999999965 78899999999998 2222222
Q ss_pred cCC-----Cceeeecc--------------cCCCcee--------------ee-----eeeeeeCCCeeEEEec-CCCcc
Q psy9327 202 PGM-----GKLVLSMK--------------SKHPIWK--------------YC-----KPVKYCNPKHTLHICN-RKMEP 242 (641)
Q Consensus 202 ~~~-----~~~v~s~~--------------~~~~v~~--------------~~-----~~l~s~~~d~~I~i~d-~~~~~ 242 (641)
|.. +..+.++. ...+.|. .. .-+.+...++.+.+|+ ..+..
T Consensus 308 prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l 387 (1113)
T KOG0644|consen 308 PRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQL 387 (1113)
T ss_pred CCCCCcccccceeeeeccccccccccccCCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccchh
Confidence 110 11111100 0000000 00 0022333566677777 22322
Q ss_pred ee-eecCCcceEEEEEcCCccEEE-EecCCeEEEEEcCCCCe-EeccccceEE-----EEEcCcEEEEEeCCCCeEEEEe
Q psy9327 243 LC-NIHENTRVKSGAWDESGVFIY-TTSNHIKYAIVNGDHGI-IRTLDLPIYI-----TKIKGNQVYYLDRECSPHVLRI 314 (641)
Q Consensus 243 ~~-~~~~~~~I~sla~~p~g~~L~-t~s~~~k~~l~~~~~g~-I~~~d~p~~~-----~~~~g~~v~~~~~dg~i~v~~~ 314 (641)
.. ...+...+..+.++|-+..++ +.+.||+.+||+.-.|+ ++..+.+-+. +..+|..+.+.++-|.+.+...
T Consensus 388 ~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts~~lsd~hgql~i~g~ 467 (1113)
T KOG0644|consen 388 LHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTSIALSDDHGQLYILGT 467 (1113)
T ss_pred hhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeecccceeeccccCCCCceEecCCCCCceEEecc
Confidence 21 122356677788888765554 55678888888865554 4444443111 3345666777777777777765
Q ss_pred CCcc
Q psy9327 315 DPTE 318 (641)
Q Consensus 315 ~~~~ 318 (641)
..++
T Consensus 468 gqs~ 471 (1113)
T KOG0644|consen 468 GQSK 471 (1113)
T ss_pred CCCc
Confidence 5444
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.9e-12 Score=123.26 Aligned_cols=152 Identities=17% Similarity=0.332 Sum_probs=116.1
Q ss_pred EEEEEccCCCeEEEEeC----------CCcEEEEECcc-Ccccccccc-cccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 13 KGLSFHPKRPWILSSLH----------NGVIQLWDYRM-NTLLEKFDE-HEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 13 ~~l~fspdg~~Lasg~~----------dg~I~iWD~~~-~~~l~~~~~-h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
..+.|+|+|.+|+.-.. -|...+|.++. +..+..++- ..++|.+++|+|++..|++..
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~---------- 78 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIY---------- 78 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEE----------
Confidence 36789999997764433 24466676633 334444443 456899999999999876552
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeC---CCeEEEEECCCCeeEE
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD---DQTIRIWYWQSRNCIC 157 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~---Dg~I~vWd~~~~~~i~ 157 (641)
+..+..|.+||.+ ++.+..+. ...+..+.|+|+|+++++|+. .|.|.+||.++.+.+.
T Consensus 79 ----------------g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~ 139 (194)
T PF08662_consen 79 ----------------GSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKIS 139 (194)
T ss_pred ----------------ccCCcccEEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEee
Confidence 0257799999997 66677764 567889999999999999875 3679999999999888
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEeC------CCeEEEEecCCC
Q psy9327 158 VLTGHNHYVMCAQFHPTDDIVVSASL------DQTIRVWDISGL 195 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~g~~lvSgs~------DgtI~IWD~~~~ 195 (641)
+.. |. .++.++|+|+|+++++++. |..++||+..+.
T Consensus 140 ~~~-~~-~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~G~ 181 (194)
T PF08662_consen 140 TFE-HS-DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQGR 181 (194)
T ss_pred ccc-cC-cEEEEEEcCCCCEEEEEEeccceeccccEEEEEecCe
Confidence 775 43 4789999999999998875 789999999753
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.3e-12 Score=125.14 Aligned_cols=158 Identities=16% Similarity=0.263 Sum_probs=120.9
Q ss_pred cCCCCeEEEEEccCCC-----eEEEEeCCCcEEEEECcc--Cccc-------ccccccccCeEEEEEeCC-CCEEEEece
Q psy9327 7 TKSARVKGLSFHPKRP-----WILSSLHNGVIQLWDYRM--NTLL-------EKFDEHEGPVRGICFHNQ-QPIFVSGGK 71 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~-----~Lasg~~dg~I~iWD~~~--~~~l-------~~~~~h~~~V~~i~fsp~-~~~l~sgs~ 71 (641)
.|.-+++.+-|.|+.. +||+++ ..+|+|.+.. .+.. .+-..+.+|+++..|+.- -+++.+++
T Consensus 94 d~~YP~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSS- 170 (364)
T KOG0290|consen 94 DHPYPVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSS- 170 (364)
T ss_pred CCCCCccceEecCCccccCcchhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeec-
Confidence 4677899999999763 566654 3699999863 2111 112346789999999974 45666665
Q ss_pred eeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe---eEEEEccCCCCeEEEEEccCC-CEEEEEeCCCeEEE
Q psy9327 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK---CIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRI 147 (641)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~---~~~~~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~I~v 147 (641)
-|.+..|||++++. ....+-.|+..|..++|...+ ..|+|.|.||.|++
T Consensus 171 ---------------------------iDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRm 223 (364)
T KOG0290|consen 171 ---------------------------IDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRM 223 (364)
T ss_pred ---------------------------ccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEE
Confidence 89999999999873 356677899999999999855 48999999999999
Q ss_pred EECCCC------------------------------------------------eeEEEEccCCCCEEEEEEecC-CCEE
Q psy9327 148 WYWQSR------------------------------------------------NCICVLTGHNHYVMCAQFHPT-DDIV 178 (641)
Q Consensus 148 Wd~~~~------------------------------------------------~~i~~l~~h~~~V~sl~fsp~-g~~l 178 (641)
+|++.. .++..+.+|.+.|..++|.|. ...|
T Consensus 224 FDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hi 303 (364)
T KOG0290|consen 224 FDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHI 303 (364)
T ss_pred EEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCcee
Confidence 999753 234456688888888888885 4678
Q ss_pred EEEeCCCeEEEEecCC
Q psy9327 179 VSASLDQTIRVWDISG 194 (641)
Q Consensus 179 vSgs~DgtI~IWD~~~ 194 (641)
.||++|..+.+||++.
T Consensus 304 ctaGDD~qaliWDl~q 319 (364)
T KOG0290|consen 304 CTAGDDCQALIWDLQQ 319 (364)
T ss_pred eecCCcceEEEEeccc
Confidence 8888888888888875
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.5e-13 Score=143.07 Aligned_cols=157 Identities=20% Similarity=0.309 Sum_probs=126.1
Q ss_pred CCeEEEEEcc-CCCeEEEEeCCCcEEEEECccCc-------ccccccccccCeEEEEEeCC-CCEEEEeceeeEEeeece
Q psy9327 10 ARVKGLSFHP-KRPWILSSLHNGVIQLWDYRMNT-------LLEKFDEHEGPVRGICFHNQ-QPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 10 ~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~~~-------~l~~~~~h~~~V~~i~fsp~-~~~l~sgs~~~~~~~~~~ 80 (641)
..|+.+.|.| |...||+++.||.|++|.+..+. .-..+..|...|+++.|||- ...|++++
T Consensus 628 t~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~as---------- 697 (1012)
T KOG1445|consen 628 TLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVAS---------- 697 (1012)
T ss_pred ceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhh----------
Confidence 5689999999 67789999999999999986542 33446689999999999994 45667776
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe-eEEEE
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN-CICVL 159 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~-~i~~l 159 (641)
.|.+|++||+.+++....+.+|++.|.+++|+|+|+.+++.+.||+|+||+.+++. .+..-
T Consensus 698 ------------------yd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg 759 (1012)
T KOG1445|consen 698 ------------------YDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEG 759 (1012)
T ss_pred ------------------ccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccC
Confidence 99999999999999999999999999999999999999999999999999998765 33332
Q ss_pred ccCC-CCEEEEEEecCCCEEEEEeCCC----eEEEEecCC
Q psy9327 160 TGHN-HYVMCAQFHPTDDIVVSASLDQ----TIRVWDISG 194 (641)
Q Consensus 160 ~~h~-~~V~sl~fsp~g~~lvSgs~Dg----tI~IWD~~~ 194 (641)
++.. ..---+.|--+|+++++.+-|. .|.+||.++
T Consensus 760 ~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~ 799 (1012)
T KOG1445|consen 760 KGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQT 799 (1012)
T ss_pred CCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhh
Confidence 2221 1223466777898888776653 567777665
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.8e-13 Score=138.60 Aligned_cols=137 Identities=14% Similarity=0.370 Sum_probs=116.6
Q ss_pred CCCeEEEEEccCC-CeEEEEeCCCcEEEEECcc--------------C--------------cccccccccccCeEEEEE
Q psy9327 9 SARVKGLSFHPKR-PWILSSLHNGVIQLWDYRM--------------N--------------TLLEKFDEHEGPVRGICF 59 (641)
Q Consensus 9 ~~~V~~l~fspdg-~~Lasg~~dg~I~iWD~~~--------------~--------------~~l~~~~~h~~~V~~i~f 59 (641)
+.+|+|+.|-|.+ ..++++-.+|.+.++|... + .++..+.-..++|+..+|
T Consensus 219 ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~F 298 (636)
T KOG2394|consen 219 KSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAF 298 (636)
T ss_pred ccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeE
Confidence 4789999999954 4677777899999997521 1 111122223457889999
Q ss_pred eCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEE
Q psy9327 60 HNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSA 139 (641)
Q Consensus 60 sp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sg 139 (641)
+|||.+||+.+ .||.++|+|+.+.+++..++..-+...|++|+|||++|++|
T Consensus 299 S~DG~~LA~VS----------------------------qDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtG 350 (636)
T KOG2394|consen 299 SPDGKYLATVS----------------------------QDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTG 350 (636)
T ss_pred cCCCceEEEEe----------------------------cCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEec
Confidence 99999999998 99999999999999888888888999999999999999999
Q ss_pred eCCCeEEEEECCCCeeEEEEccCCCCEEEEEEec
Q psy9327 140 SDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP 173 (641)
Q Consensus 140 s~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp 173 (641)
+.|.-|.||.+..++.+..-.||...|..++|.|
T Consensus 351 GEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 351 GEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred CCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence 9999999999999999999999999999999983
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.1e-12 Score=125.87 Aligned_cols=228 Identities=13% Similarity=0.166 Sum_probs=161.8
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc-ccccCeEEEEEeCCCCEEEEeceee-EEee----
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD-EHEGPVRGICFHNQQPIFVSGGKMI-VMAY---- 77 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~-~h~~~V~~i~fsp~~~~l~sgs~~~-~~~~---- 77 (641)
.+.+|.+.|+++.|..++. |.+|...|.|++|++++...+..++ .|...|+.+.--|++.+ .+-++.. ...|
T Consensus 9 vLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~d~l-~tqgRd~~L~lw~ia~ 86 (323)
T KOG0322|consen 9 VLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPNDSL-DTQGRDPLLILWTIAY 86 (323)
T ss_pred Eeccccchheehhhccchh-hhcccccceEEEEEeecCccchhhhhhccceeeceeecCCcch-hhcCCCceEEEEEccC
Confidence 4669999999999998775 9999999999999999887776666 45556666655554221 1111000 0000
Q ss_pred ---------------------------------------------------------------eceeeecc-cCC-ccee
Q psy9327 78 ---------------------------------------------------------------QGCILESR-NEP-CLFR 92 (641)
Q Consensus 78 ---------------------------------------------------------------~~~~~~~~-~~~-~~~~ 92 (641)
-|.+++.. .+- ....
T Consensus 87 s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~ 166 (323)
T KOG0322|consen 87 SAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTF 166 (323)
T ss_pred cceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccceE
Confidence 01111111 111 2234
Q ss_pred eEEEeeCCCeEEEEECCCCee----------EEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC--eeE--EE
Q psy9327 93 IKSVLGDDYKIKVWNYKQRKC----------IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR--NCI--CV 158 (641)
Q Consensus 93 ~~~~~s~Dg~I~vWD~~t~~~----------~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~--~~i--~~ 158 (641)
++++|-++|.+-+||+.++.. ......|..+|.++.+.+.-..=++|+.+.++..|+++.. .+. ..
T Consensus 167 lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e 246 (323)
T KOG0322|consen 167 LLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKE 246 (323)
T ss_pred EEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccce
Confidence 556778899999999999833 3334569999999999886666688888889999988643 221 11
Q ss_pred EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~ 238 (641)
..--+-.|..+..-||++.++|++.|+.||||++++++....+.-
T Consensus 247 ~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLky----------------------------------- 291 (323)
T KOG0322|consen 247 ITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKY----------------------------------- 291 (323)
T ss_pred EEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhh-----------------------------------
Confidence 111234578889999999999999999999999999877666542
Q ss_pred CCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 239 KMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 239 ~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
|...|.+++|+|+...++.++.|.++.+|.
T Consensus 292 ---------Hsagvn~vAfspd~~lmAaaskD~rISLWk 321 (323)
T KOG0322|consen 292 ---------HSAGVNAVAFSPDCELMAAASKDARISLWK 321 (323)
T ss_pred ---------hhcceeEEEeCCCCchhhhccCCceEEeee
Confidence 346788899999989999999999999985
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.5e-12 Score=127.74 Aligned_cols=116 Identities=21% Similarity=0.367 Sum_probs=99.8
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeeccc
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRN 86 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~ 86 (641)
.|+-.|-.+-....+.++++++.|..|.|||+. |+.+..++.....-+..+.||+|+++++++
T Consensus 185 kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~g---------------- 247 (420)
T KOG2096|consen 185 KHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSG---------------- 247 (420)
T ss_pred hcccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcEEEEec----------------
Confidence 566677778888888999999999999999998 888888877777777889999999999998
Q ss_pred CCcceeeEEEeeCCCeEEEEECC---CC-----eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC
Q psy9327 87 EPCLFRIKSVLGDDYKIKVWNYK---QR-----KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151 (641)
Q Consensus 87 ~~~~~~~~~~~s~Dg~I~vWD~~---t~-----~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~ 151 (641)
..--|+||..- .| ..++.++||...|...+|+++...+++.|.||++++||..
T Consensus 248 ------------FTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtd 308 (420)
T KOG2096|consen 248 ------------FTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTD 308 (420)
T ss_pred ------------CCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeecc
Confidence 66668888752 22 3467889999999999999999999999999999999975
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.4e-13 Score=139.20 Aligned_cols=245 Identities=13% Similarity=0.141 Sum_probs=190.1
Q ss_pred eEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeee--ceeeecccCCc
Q psy9327 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQ--GCILESRNEPC 89 (641)
Q Consensus 12 V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~--~~~~~~~~~~~ 89 (641)
-..+.++.+|..++.|+..|.|-.+|+.++++...+. -...|..+.|-.+..++|++-+...+.|+ |..+.+-....
T Consensus 132 PY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~-v~Etv~Dv~~LHneq~~AVAQK~y~yvYD~~GtElHClk~~~ 210 (545)
T KOG1272|consen 132 PYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEIN-VMETVRDVTFLHNEQFFAVAQKKYVYVYDNNGTELHCLKRHI 210 (545)
T ss_pred CeeeeecCCccEEEecCCccceeeeecccceeeeeee-hhhhhhhhhhhcchHHHHhhhhceEEEecCCCcEEeehhhcC
Confidence 4578899999999999999999999999998877763 45678889998888888888876666664 33333322221
Q ss_pred ---------ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc
Q psy9327 90 ---------LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 90 ---------~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~ 160 (641)
...++++++..|.++--|+.+|+.+..+..-.+.+..++-+|-+..+-.|...|+|.+|...+.+++..+.
T Consensus 211 ~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiL 290 (545)
T KOG1272|consen 211 RVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKIL 290 (545)
T ss_pred chhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHH
Confidence 13466788899999999999999999999889999999999999999999999999999999999998888
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeee---eeeeCCCeeEEEec
Q psy9327 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKP---VKYCNPKHTLHICN 237 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~---l~s~~~d~~I~i~d 237 (641)
.|.++|.+++++++|.+++|++.|..++|||+++.....+... .+|...++++ +..++.+..+.+|.
T Consensus 291 cH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t----------p~~a~~ls~SqkglLA~~~G~~v~iw~ 360 (545)
T KOG1272|consen 291 CHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT----------PHPASNLSLSQKGLLALSYGDHVQIWK 360 (545)
T ss_pred hcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec----------CCCccccccccccceeeecCCeeeeeh
Confidence 9999999999999999999999999999999999776555432 2222222222 45566777888887
Q ss_pred CCCc--c-----eeeecCCcceEEEEEcCCccEEEEe
Q psy9327 238 RKME--P-----LCNIHENTRVKSGAWDESGVFIYTT 267 (641)
Q Consensus 238 ~~~~--~-----~~~~~~~~~I~sla~~p~g~~L~t~ 267 (641)
..+. . .-......+|..+.|.|-...|-.|
T Consensus 361 d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIG 397 (545)
T KOG1272|consen 361 DALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVLGIG 397 (545)
T ss_pred hhhcCCCCCCcchhhhccCcccccceeccHHHeeecc
Confidence 3221 1 1111125688888888876666554
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.9e-12 Score=140.02 Aligned_cols=216 Identities=11% Similarity=0.091 Sum_probs=141.3
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCC---CcEEEEECccCcc--cccccccccCeEEEEEeCCCCEEEEeceeeEEee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHN---GVIQLWDYRMNTL--LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAY 77 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~d---g~I~iWD~~~~~~--l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~ 77 (641)
+.+..|...+.+.+|||||+.|+.++.+ ..|.+||+.+++. +..+.+| ...++|+|||+.|+.++
T Consensus 197 ~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~wSPDG~~La~~~------- 266 (429)
T PRK01742 197 FIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPAFSPDGSRLAFAS------- 266 (429)
T ss_pred eEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCceeECCCCCEEEEEE-------
Confidence 3456778889999999999999887653 4699999987753 3334433 44689999999988875
Q ss_pred eceeeecccCCcceeeEEEeeCCCeEEE--EECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEe-CCCeEEEEECCCCe
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDYKIKV--WNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS-DDQTIRIWYWQSRN 154 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg~I~v--WD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs-~Dg~I~vWd~~~~~ 154 (641)
+.+|.+.+ ||..+++ ...+..+...+...+|+|+++.|+.++ .++...||++....
T Consensus 267 --------------------~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~ 325 (429)
T PRK01742 267 --------------------SKDGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASG 325 (429)
T ss_pred --------------------ecCCcEEEEEEECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCC
Confidence 25676555 5666665 455666777888999999999877655 57888888765322
Q ss_pred -eEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeee-eeeeCCCee
Q psy9327 155 -CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKP-VKYCNPKHT 232 (641)
Q Consensus 155 -~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~-l~s~~~d~~ 232 (641)
....+ ++.. .+..|+|+|+.|+.++.++ +.+||+.+++......... ...|.|..... +++++.++.
T Consensus 326 ~~~~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~~-------~~~~~~sPdG~~i~~~s~~g~ 394 (429)
T PRK01742 326 GGASLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTFL-------DESPSISPNGIMIIYSSTQGL 394 (429)
T ss_pred CCeEEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCCC-------CCCceECCCCCEEEEEEcCCC
Confidence 22233 3444 4578999999998888775 4559998876543322211 11222322221 344444554
Q ss_pred EEEe---cCCCcceeeecC-CcceEEEEEcCC
Q psy9327 233 LHIC---NRKMEPLCNIHE-NTRVKSGAWDES 260 (641)
Q Consensus 233 I~i~---d~~~~~~~~~~~-~~~I~sla~~p~ 260 (641)
..+| +..+.....+.. ...+...+|+|-
T Consensus 395 ~~~l~~~~~~G~~~~~l~~~~g~~~~p~wsp~ 426 (429)
T PRK01742 395 GKVLQLVSADGRFKARLPGSDGQVKFPAWSPY 426 (429)
T ss_pred ceEEEEEECCCCceEEccCCCCCCCCcccCCC
Confidence 4444 445655555543 456777888874
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=3e-11 Score=132.49 Aligned_cols=258 Identities=14% Similarity=0.165 Sum_probs=170.5
Q ss_pred CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC
Q psy9327 31 GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ 110 (641)
Q Consensus 31 g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t 110 (641)
+.+.+|++.........-....+|.++.|+|..+.+++|| ..+|+|.+||++.
T Consensus 222 ~~~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG---------------------------~y~GqV~lWD~~~ 274 (555)
T KOG1587|consen 222 GVLLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGG---------------------------CYNGQVVLWDLRK 274 (555)
T ss_pred ceEEEEecCCCCCceEEEecCCceeEEEeccCCcceEEee---------------------------ccCceEEEEEccC
Confidence 4789999877632222224567999999999877777666 4999999999987
Q ss_pred Cee--EEE----EccCCCCeEEEEEccCCCE--EEEEeCCCeEEEEECCCCee------EEEEc------cCCCCEEEEE
Q psy9327 111 RKC--IFT----LLGHLDYIRTTFFHHEYPW--ILSASDDQTIRIWYWQSRNC------ICVLT------GHNHYVMCAQ 170 (641)
Q Consensus 111 ~~~--~~~----~~~h~~~V~~v~fsp~~~~--l~sgs~Dg~I~vWd~~~~~~------i~~l~------~h~~~V~sl~ 170 (641)
+.. ... ...|.++|..+.|..+..- |+|+|.||.|..|+++.-.. ..... .-...++++.
T Consensus 275 ~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~ 354 (555)
T KOG1587|consen 275 GSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLK 354 (555)
T ss_pred CCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEe
Confidence 654 221 2358999999999876554 99999999999998865322 11111 1234588999
Q ss_pred EecC-CCEEEEEeCCCeEEEEecCCCceee--------eccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC--C
Q psy9327 171 FHPT-DDIVVSASLDQTIRVWDISGLRKKN--------VAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR--K 239 (641)
Q Consensus 171 fsp~-g~~lvSgs~DgtI~IWD~~~~~~~~--------~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~--~ 239 (641)
|.|. ...++.|+++|.|.-=+..+.+... ....|...|.++. ..|.+.-. +.+++ |-++++|.. .
T Consensus 355 F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~-~nPF~~k~--fls~g-DW~vriWs~~~~ 430 (555)
T KOG1587|consen 355 FEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVS-RNPFYPKN--FLSVG-DWTVRIWSEDVI 430 (555)
T ss_pred eccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeee-cCCCccce--eeeec-cceeEeccccCC
Confidence 9995 4679999999999875444332221 2222334443322 22211111 23343 999999993 3
Q ss_pred CcceeeecC-CcceEEEEEcCCc-cEEEEecCCeEEEEEcCCCC---eEecc-----ccceEEEEEcCcEEEEEeCCCCe
Q psy9327 240 MEPLCNIHE-NTRVKSGAWDESG-VFIYTTSNHIKYAIVNGDHG---IIRTL-----DLPIYITKIKGNQVYYLDRECSP 309 (641)
Q Consensus 240 ~~~~~~~~~-~~~I~sla~~p~g-~~L~t~s~~~k~~l~~~~~g---~I~~~-----d~p~~~~~~~g~~v~~~~~dg~i 309 (641)
..++..+.. ...+++++|+|.. ..++++..+|.+.+|+.... .+... -.+...+...|..+.+++..|.+
T Consensus 431 ~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~ 510 (555)
T KOG1587|consen 431 ASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTT 510 (555)
T ss_pred CCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcE
Confidence 455555544 5569999999985 45667778999999985332 22221 11122244558899999999999
Q ss_pred EEEEeCCcch
Q psy9327 310 HVLRIDPTEF 319 (641)
Q Consensus 310 ~v~~~~~~~~ 319 (641)
.++.+.+.-.
T Consensus 511 ~~~~l~~~l~ 520 (555)
T KOG1587|consen 511 HILKLSESLA 520 (555)
T ss_pred EEEEcCchhh
Confidence 9999975433
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.41 E-value=1e-12 Score=135.49 Aligned_cols=274 Identities=13% Similarity=0.079 Sum_probs=196.2
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc-ccccCeEEEEEeCC--CCEEEEece-------
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD-EHEGPVRGICFHNQ--QPIFVSGGK------- 71 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~-~h~~~V~~i~fsp~--~~~l~sgs~------- 71 (641)
..+|.+|.+.|+.+.|+..|.++++|+.|..|.+||+..+.....|. +|...|....|-|. ..-++++++
T Consensus 135 ~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s 214 (559)
T KOG1334|consen 135 QKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVS 214 (559)
T ss_pred hhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeee
Confidence 46789999999999999999999999999999999999998877775 68888888888773 334555442
Q ss_pred -----------eeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc---cCCC---CeEEEEEccCCC
Q psy9327 72 -----------MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL---GHLD---YIRTTFFHHEYP 134 (641)
Q Consensus 72 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~---~h~~---~V~~v~fsp~~~ 134 (641)
.....+.|.+-+....|..+.-+.+++.|+.+.-.|++.+.+...+. .+.. ...+++.+|..+
T Consensus 215 ~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt 294 (559)
T KOG1334|consen 215 EILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNT 294 (559)
T ss_pred eeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCc
Confidence 11334456666667788888888999999999999999886544442 2333 567888999766
Q ss_pred -EEEEEeCCCeEEEEECCCCe------eEEEEcc------CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce----
Q psy9327 135 -WILSASDDQTIRIWYWQSRN------CICVLTG------HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK---- 197 (641)
Q Consensus 135 -~l~sgs~Dg~I~vWd~~~~~------~i~~l~~------h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~---- 197 (641)
.+++|+.|.-+++||.+.-. .+..+.. ....|++++|++++.-++++-.|--|+++.-..+..
T Consensus 295 ~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~ 374 (559)
T KOG1334|consen 295 NEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPD 374 (559)
T ss_pred cccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCCC
Confidence 89999999999999986421 2233322 234589999999888777778888899995432211
Q ss_pred ---------eeeccCC--CceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeee-cC-CcceEEEEEcCCccEE
Q psy9327 198 ---------KNVAPGM--GKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNI-HE-NTRVKSGAWDESGVFI 264 (641)
Q Consensus 198 ---------~~~~~~~--~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~-~~-~~~I~sla~~p~g~~L 264 (641)
...+.|| ...|-.+..+.|--.+ +.+|+.-|.|-||+++...+..+ .. ..-|+|+.=+|--..|
T Consensus 375 ~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEy---VvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvL 451 (559)
T KOG1334|consen 375 PSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEY---VVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVL 451 (559)
T ss_pred CCcchhhccchhhcccccccccceeeeccCccce---EEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchh
Confidence 1112233 1223333333332222 77888999999999765544333 32 3467888888888889
Q ss_pred EEecCCeEEEEEcC
Q psy9327 265 YTTSNHIKYAIVNG 278 (641)
Q Consensus 265 ~t~s~~~k~~l~~~ 278 (641)
++.+-+-.+.||..
T Consensus 452 AsSGid~DVKIWTP 465 (559)
T KOG1334|consen 452 ASSGIDHDVKIWTP 465 (559)
T ss_pred hccCCccceeeecC
Confidence 98887777777764
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.1e-11 Score=125.71 Aligned_cols=156 Identities=10% Similarity=0.174 Sum_probs=111.6
Q ss_pred CCeEEEEEccCCCeEEEEeC-CCcEEEEECcc-Ccc---cccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 10 ARVKGLSFHPKRPWILSSLH-NGVIQLWDYRM-NTL---LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~-dg~I~iWD~~~-~~~---l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
+....++|+|+++++++++. ++.|.+||+.+ +.. +..+ .+.....+++|+|+++++++++
T Consensus 80 ~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~-~~~~~~~~~~~~p~g~~l~v~~-------------- 144 (330)
T PRK11028 80 GSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQII-EGLEGCHSANIDPDNRTLWVPC-------------- 144 (330)
T ss_pred CCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeec-cCCCcccEeEeCCCCCEEEEee--------------
Confidence 35678999999998888764 89999999864 322 2222 2334567889999999987776
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEE-------EEccCCCCeEEEEEccCCCEEEEEeC-CCeEEEEECCC--C-
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIF-------TLLGHLDYIRTTFFHHEYPWILSASD-DQTIRIWYWQS--R- 153 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~-------~~~~h~~~V~~v~fsp~~~~l~sgs~-Dg~I~vWd~~~--~- 153 (641)
..++.|.+||+.+...+. .... ....+.++|+|++++++++.. +++|.+||+.. +
T Consensus 145 -------------~~~~~v~v~d~~~~g~l~~~~~~~~~~~~-g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~ 210 (330)
T PRK11028 145 -------------LKEDRIRLFTLSDDGHLVAQEPAEVTTVE-GAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGE 210 (330)
T ss_pred -------------CCCCEEEEEEECCCCcccccCCCceecCC-CCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCC
Confidence 378999999997632221 1111 234678999999999987776 89999999973 2
Q ss_pred -eeEEEEccC------CCCEEEEEEecCCCEEEEEeC-CCeEEEEecCC
Q psy9327 154 -NCICVLTGH------NHYVMCAQFHPTDDIVVSASL-DQTIRVWDISG 194 (641)
Q Consensus 154 -~~i~~l~~h------~~~V~sl~fsp~g~~lvSgs~-DgtI~IWD~~~ 194 (641)
+.+..+..+ ......+.|+|++++++++.. +++|.+|++..
T Consensus 211 ~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~ 259 (330)
T PRK11028 211 IECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSE 259 (330)
T ss_pred EEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeC
Confidence 234444322 123446889999999888754 78999999965
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.2e-11 Score=120.40 Aligned_cols=236 Identities=14% Similarity=0.142 Sum_probs=152.9
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccc-cccCeEEEEEeCC-CCEEEEeceeeEEeee--------
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDE-HEGPVRGICFHNQ-QPIFVSGGKMIVMAYQ-------- 78 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~-h~~~V~~i~fsp~-~~~l~sgs~~~~~~~~-------- 78 (641)
+..+..++||+.-.-+|++..|-+|++||-.. +...+++. ....|+|++|.|. +.-|+.|++..+..|.
T Consensus 98 ~~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~gIciW~~s~tln~~ 176 (445)
T KOG2139|consen 98 EIDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAGICIWSDSRTLNAN 176 (445)
T ss_pred hcceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecceeEEEEcCcccccc
Confidence 35678899999777789999999999999765 55555543 4568999999994 5677777765554441
Q ss_pred ----------c---------eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEE
Q psy9327 79 ----------G---------CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSA 139 (641)
Q Consensus 79 ----------~---------~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sg 139 (641)
+ .+..-...++...+.-++-.|..|+|||..++..+.-..-..+.++-+.|+||+.+|+++
T Consensus 177 r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaA 256 (445)
T KOG2139|consen 177 RNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAA 256 (445)
T ss_pred cccccccccchhheeCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEe
Confidence 1 112222333344444455577899999999998766554567889999999999999999
Q ss_pred eCCCeEEEEECC-CCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCce
Q psy9327 140 SDDQTIRIWYWQ-SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIW 218 (641)
Q Consensus 140 s~Dg~I~vWd~~-~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~ 218 (641)
.-|+..++|+.. +..+..... ..++|.+.+|+|+|++|+-++. |.-++|.+..-.....+.+
T Consensus 257 t~davfrlw~e~q~wt~erw~l-gsgrvqtacWspcGsfLLf~~s-gsp~lysl~f~~~~~~~~~--------------- 319 (445)
T KOG2139|consen 257 TCDAVFRLWQENQSWTKERWIL-GSGRVQTACWSPCGSFLLFACS-GSPRLYSLTFDGEDSVFLR--------------- 319 (445)
T ss_pred cccceeeeehhcccceecceec-cCCceeeeeecCCCCEEEEEEc-CCceEEEEeecCCCccccC---------------
Confidence 999999999653 333333333 3459999999999987655443 2344555433111111110
Q ss_pred eeeeeeeeeCCCeeEEEecCCCcceeeec--CCcceEEEEEcCCccEEEEecC
Q psy9327 219 KYCKPVKYCNPKHTLHICNRKMEPLCNIH--ENTRVKSGAWDESGVFIYTTSN 269 (641)
Q Consensus 219 ~~~~~l~s~~~d~~I~i~d~~~~~~~~~~--~~~~I~sla~~p~g~~L~t~s~ 269 (641)
.++.....-+.|.....+..-. -.+++.+++|||.|.+++..-.
T Consensus 320 -------~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fK 365 (445)
T KOG2139|consen 320 -------PQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFK 365 (445)
T ss_pred -------cccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEc
Confidence 1112222333332211111111 1577889999999999998653
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=8.1e-11 Score=129.00 Aligned_cols=162 Identities=14% Similarity=0.062 Sum_probs=119.7
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeC---CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLH---NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~---dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
+.+..|.+.+.+.+|+|||+.|+..+. +..|.+||+.+++. ..+..+.+.+.+.+|+|||..++...
T Consensus 195 ~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~-~~l~~~~g~~~~~~~SPDG~~la~~~--------- 264 (435)
T PRK05137 195 RYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQR-ELVGNFPGMTFAPRFSPDGRKVVMSL--------- 264 (435)
T ss_pred EEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcE-EEeecCCCcccCcEECCCCCEEEEEE---------
Confidence 456778889999999999998887753 46899999988754 34455667788899999999876543
Q ss_pred eeeecccCCcceeeEEEeeCCC--eEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC---CeEEEEECCCCe
Q psy9327 80 CILESRNEPCLFRIKSVLGDDY--KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD---QTIRIWYWQSRN 154 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg--~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D---g~I~vWd~~~~~ 154 (641)
+.++ .|.+||+.++.. ..+..+.+.....+|+|++..++.+++. ..|++||...++
T Consensus 265 ------------------~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~ 325 (435)
T PRK05137 265 ------------------SQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSN 325 (435)
T ss_pred ------------------ecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCC
Confidence 1444 588889988765 4466666677789999999988877643 368888987665
Q ss_pred eEEEEccCCCCEEEEEEecCCCEEEEEeCC---CeEEEEecCC
Q psy9327 155 CICVLTGHNHYVMCAQFHPTDDIVVSASLD---QTIRVWDISG 194 (641)
Q Consensus 155 ~i~~l~~h~~~V~sl~fsp~g~~lvSgs~D---gtI~IWD~~~ 194 (641)
. ..+..+...+....|+|+|+.|+..+.+ ..|.+||..+
T Consensus 326 ~-~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~ 367 (435)
T PRK05137 326 P-RRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDG 367 (435)
T ss_pred e-EEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCC
Confidence 4 3444345567778999999998876653 2566667644
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.5e-11 Score=129.64 Aligned_cols=165 Identities=15% Similarity=0.050 Sum_probs=117.5
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeC---CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLH---NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~---dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
+.+..|.+.+.+.+|+|||+.|+..+. +..|.+||+.+++.. .+..+.+...+.+|+|+|+.++...
T Consensus 197 ~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~-~l~~~~g~~~~~~~SpDG~~l~~~~--------- 266 (433)
T PRK04922 197 QTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRE-LVASFRGINGAPSFSPDGRRLALTL--------- 266 (433)
T ss_pred eEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEE-EeccCCCCccCceECCCCCEEEEEE---------
Confidence 345667778999999999999887764 346999999877542 2333445556789999999876543
Q ss_pred eeeecccCCcceeeEEEeeCC--CeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeC-CCe--EEEEECCCCe
Q psy9327 80 CILESRNEPCLFRIKSVLGDD--YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD-DQT--IRIWYWQSRN 154 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~D--g~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~-Dg~--I~vWd~~~~~ 154 (641)
+.+ ..|.+||+.+++. ..+..+.......+|+|+++.++.+++ ++. |+++|+.+++
T Consensus 267 ------------------s~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~ 327 (433)
T PRK04922 267 ------------------SRDGNPEIYVMDLGSRQL-TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGS 327 (433)
T ss_pred ------------------eCCCCceEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence 133 4699999998874 445556666677899999998887765 444 7777777665
Q ss_pred eEEEEccCCCCEEEEEEecCCCEEEEEeCCC---eEEEEecCCCce
Q psy9327 155 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQ---TIRVWDISGLRK 197 (641)
Q Consensus 155 ~i~~l~~h~~~V~sl~fsp~g~~lvSgs~Dg---tI~IWD~~~~~~ 197 (641)
.. .+..+.......+|+|+|+.|+..+.++ .|.+||+.+++.
T Consensus 328 ~~-~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~ 372 (433)
T PRK04922 328 AE-RLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSV 372 (433)
T ss_pred eE-EeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCe
Confidence 32 3333344556789999999988765443 688999876543
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.9e-11 Score=132.25 Aligned_cols=135 Identities=13% Similarity=0.110 Sum_probs=99.6
Q ss_pred CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC
Q psy9327 30 NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK 109 (641)
Q Consensus 30 dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~ 109 (641)
+..|.+||.+... ...+..|...+.+.+|+|+|..++.++.. ..+..|.+||+.
T Consensus 183 ~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~-------------------------~~~~~i~i~dl~ 236 (429)
T PRK01742 183 PYEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFE-------------------------NKKSQLVVHDLR 236 (429)
T ss_pred eEEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEec-------------------------CCCcEEEEEeCC
Confidence 4789999986544 45566788899999999999999887510 123579999999
Q ss_pred CCee--EEEEccCCCCeEEEEEccCCCEEEEEe-CCCeEEEE--ECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEe-C
Q psy9327 110 QRKC--IFTLLGHLDYIRTTFFHHEYPWILSAS-DDQTIRIW--YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSAS-L 183 (641)
Q Consensus 110 t~~~--~~~~~~h~~~V~~v~fsp~~~~l~sgs-~Dg~I~vW--d~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs-~ 183 (641)
+++. +..+.+| ....+|+|+|+.|+.++ .++.+.|| |..++. ...+..+...+.+..|+|||+.|+.++ .
T Consensus 237 tg~~~~l~~~~g~---~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~~ 312 (429)
T PRK01742 237 SGARKVVASFRGH---NGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSDR 312 (429)
T ss_pred CCceEEEecCCCc---cCceeECCCCCEEEEEEecCCcEEEEEEECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEECC
Confidence 8753 3334444 34689999999888765 57765555 665555 456667777888999999999777555 5
Q ss_pred CCeEEEEecCC
Q psy9327 184 DQTIRVWDISG 194 (641)
Q Consensus 184 DgtI~IWD~~~ 194 (641)
++...||++..
T Consensus 313 ~g~~~I~~~~~ 323 (429)
T PRK01742 313 SGSPQVYRMSA 323 (429)
T ss_pred CCCceEEEEEC
Confidence 78889998753
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.3e-10 Score=127.04 Aligned_cols=163 Identities=7% Similarity=-0.029 Sum_probs=113.8
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeC---CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLH---NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~---dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
.+..+...+.+.+|||||+.|+..+. +..|.+||+.+++.. .+....+.+...+|+|||+.|+...
T Consensus 193 ~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~-~l~~~~~~~~~~~~SPDG~~La~~~---------- 261 (429)
T PRK03629 193 VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFAL---------- 261 (429)
T ss_pred EeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeE-EccCCCCCcCCeEECCCCCEEEEEE----------
Confidence 34556678999999999998886542 457999999887532 2222333455689999999888653
Q ss_pred eeecccCCcceeeEEEeeCCC--eEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC-C--eEEEEECCCCee
Q psy9327 81 ILESRNEPCLFRIKSVLGDDY--KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD-Q--TIRIWYWQSRNC 155 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg--~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D-g--~I~vWd~~~~~~ 155 (641)
+.++ .|.+||+.+++... +..+...+....|+|+++.|+.++++ + .|+++|..+++.
T Consensus 262 -----------------~~~g~~~I~~~d~~tg~~~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~ 323 (429)
T PRK03629 262 -----------------SKTGSLNLYVMDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP 323 (429)
T ss_pred -----------------cCCCCcEEEEEECCCCCEEE-ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCe
Confidence 1333 69999999887544 44455567889999999988877764 3 455557766643
Q ss_pred EEEEccCCCCEEEEEEecCCCEEEEEeCC---CeEEEEecCCCc
Q psy9327 156 ICVLTGHNHYVMCAQFHPTDDIVVSASLD---QTIRVWDISGLR 196 (641)
Q Consensus 156 i~~l~~h~~~V~sl~fsp~g~~lvSgs~D---gtI~IWD~~~~~ 196 (641)
..+..+.....+..|+|+|++++..+.+ ..|.+||+.+++
T Consensus 324 -~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~ 366 (429)
T PRK03629 324 -QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 366 (429)
T ss_pred -EEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCC
Confidence 3444445556788999999998876653 357788887654
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.36 E-value=5.6e-11 Score=124.83 Aligned_cols=259 Identities=12% Similarity=0.165 Sum_probs=174.3
Q ss_pred cCCCCeEEEEEccCCCeEE-EEeCCCcEEEEECccCcccccccccc--cCeEEEEEeCCCCE--EEEeceeeEEee----
Q psy9327 7 TKSARVKGLSFHPKRPWIL-SSLHNGVIQLWDYRMNTLLEKFDEHE--GPVRGICFHNQQPI--FVSGGKMIVMAY---- 77 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~La-sg~~dg~I~iWD~~~~~~l~~~~~h~--~~V~~i~fsp~~~~--l~sgs~~~~~~~---- 77 (641)
+|...-+.|..+|||+|++ +|..--.|++||+..-. .+|+.|- ..|.-.-.+.|-.. ++-.. ..+-.|
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLS--LKFERhlDae~V~feiLsDD~SK~v~L~~D-R~IefHak~G 125 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLS--LKFERHLDAEVVDFEILSDDYSKSVFLQND-RTIEFHAKYG 125 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccce--eeeeecccccceeEEEeccchhhheEeecC-ceeeehhhcC
Confidence 3677888999999999765 56678899999986543 3455442 34444444433221 11111 111111
Q ss_pred ---e------ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEE
Q psy9327 78 ---Q------GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148 (641)
Q Consensus 78 ---~------~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vW 148 (641)
. |--++.....+. +..++....|.-.+++.|+.+..|....+.+++|..++...+|++|+.||.|-.|
T Consensus 126 ~hy~~RIP~~GRDm~y~~~scD---ly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfw 202 (703)
T KOG2321|consen 126 RHYRTRIPKFGRDMKYHKPSCD---LYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFW 202 (703)
T ss_pred eeeeeecCcCCccccccCCCcc---EEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEe
Confidence 0 111111112222 2233355568889999999999999888999999999999999999999999999
Q ss_pred ECCCCeeEEEEc------cCCCC-----EEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC-CceeeecccCCC
Q psy9327 149 YWQSRNCICVLT------GHNHY-----VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM-GKLVLSMKSKHP 216 (641)
Q Consensus 149 d~~~~~~i~~l~------~h~~~-----V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~-~~~v~s~~~~~~ 216 (641)
|.+++..+.++. .|.+. |+++.|+.+|-.+++|+.+|.+.|||+++.+....-... .-++..+.....
T Consensus 203 DpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~ 282 (703)
T KOG2321|consen 203 DPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDT 282 (703)
T ss_pred cchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeeccccc
Confidence 999887666654 23333 999999999999999999999999999987765443321 122222111000
Q ss_pred ceeeeeeeeeeCCCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEE
Q psy9327 217 IWKYCKPVKYCNPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYA 274 (641)
Q Consensus 217 v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~ 274 (641)
. .......-....++||| ..+.....+.....++.+|+-|++-+++++...+++.
T Consensus 283 --~-~q~~v~S~Dk~~~kiWd~~~Gk~~asiEpt~~lND~C~~p~sGm~f~Ane~~~m~ 338 (703)
T KOG2321|consen 283 --D-QQNKVVSMDKRILKIWDECTGKPMASIEPTSDLNDFCFVPGSGMFFTANESSKMH 338 (703)
T ss_pred --C-CCceEEecchHHhhhcccccCCceeeccccCCcCceeeecCCceEEEecCCCcce
Confidence 0 00111222567899999 6688888888888999999999988888887766544
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.1e-10 Score=113.48 Aligned_cols=237 Identities=16% Similarity=0.234 Sum_probs=160.0
Q ss_pred CeEEEEEcc---CCCeEEEEeC----CCcEEEEECc--cCcccccc-cccccCeEEEEEeCCCC-----EEEEeceeeEE
Q psy9327 11 RVKGLSFHP---KRPWILSSLH----NGVIQLWDYR--MNTLLEKF-DEHEGPVRGICFHNQQP-----IFVSGGKMIVM 75 (641)
Q Consensus 11 ~V~~l~fsp---dg~~Lasg~~----dg~I~iWD~~--~~~~l~~~-~~h~~~V~~i~fsp~~~-----~l~sgs~~~~~ 75 (641)
.+.++.|+. .+.+||.|+. .+.|+|-.+. +++.+..- -.|.-|++.+.|.|+.. +|+++
T Consensus 46 ~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs------ 119 (364)
T KOG0290|consen 46 PLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATS------ 119 (364)
T ss_pred ceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhcc------
Confidence 477888884 3447888875 4667776553 44443322 26889999999999863 45554
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCC--Cee--EEEE-----ccCCCCeEEEEEccC-CCEEEEEeCCCeE
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ--RKC--IFTL-----LGHLDYIRTTFFHHE-YPWILSASDDQTI 145 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t--~~~--~~~~-----~~h~~~V~~v~fsp~-~~~l~sgs~Dg~I 145 (641)
+..+++|.+.. ++. ...+ ..+..++++..|+.- -+++.++|-|-+.
T Consensus 120 ------------------------~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTC 175 (364)
T KOG0290|consen 120 ------------------------SDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTC 175 (364)
T ss_pred ------------------------cCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeE
Confidence 34799998863 221 1111 235678999999884 4578899999999
Q ss_pred EEEECCCCe---eEEEEccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEecCCCceeeec---cCCCceeeecccCCCce
Q psy9327 146 RIWYWQSRN---CICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVA---PGMGKLVLSMKSKHPIW 218 (641)
Q Consensus 146 ~vWd~~~~~---~i~~l~~h~~~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~~~~~~~~---~~~~~~v~s~~~~~~v~ 218 (641)
.|||++++. ....+-+|...|..++|...+ +.++|.+.||.+|+||++....-..+ +......+.+.....--
T Consensus 176 TiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDp 255 (364)
T KOG0290|consen 176 TIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDP 255 (364)
T ss_pred EEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCc
Confidence 999999863 356778999999999999865 68999999999999999986543322 11122222222111000
Q ss_pred eeeeeeeee-CCCeeEEEecCC--Ccceeeec-CCcceEEEEEcCC-ccEEEEecCCeEEEEEcCCC
Q psy9327 219 KYCKPVKYC-NPKHTLHICNRK--MEPLCNIH-ENTRVKSGAWDES-GVFIYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 219 ~~~~~l~s~-~~d~~I~i~d~~--~~~~~~~~-~~~~I~sla~~p~-g~~L~t~s~~~k~~l~~~~~ 280 (641)
.+ +++- -....|.|-|.+ ..+++.+. |.+.|+.++|.|. ...|.|++.|-...+|+.+.
T Consensus 256 ny---mATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q 319 (364)
T KOG0290|consen 256 NY---MATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQ 319 (364)
T ss_pred hH---HhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEeccc
Confidence 00 1221 234567777843 34555554 5889999999997 67888888888889997654
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=7.6e-11 Score=128.78 Aligned_cols=163 Identities=11% Similarity=0.083 Sum_probs=113.3
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCC---CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHN---GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~d---g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
.+..+.+.+.+.+|||||+.|+..+.+ ..|.+||+.+++.. .+....+.+.+.+|+|||+.++...
T Consensus 190 ~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~la~~~---------- 258 (427)
T PRK02889 190 SALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRR-VVANFKGSNSAPAWSPDGRTLAVAL---------- 258 (427)
T ss_pred EeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEE-EeecCCCCccceEECCCCCEEEEEE----------
Confidence 455677889999999999998877642 45999999888643 3333445667899999999887543
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEE--CCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeC-CCeEEEEEC--CCCee
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWN--YKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD-DQTIRIWYW--QSRNC 155 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD--~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~-Dg~I~vWd~--~~~~~ 155 (641)
+.++...+|. ..++. ...+..+.+......|+|||++++..++ ++...+|.+ .++..
T Consensus 259 -----------------~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~ 320 (427)
T PRK02889 259 -----------------SRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAA 320 (427)
T ss_pred -----------------ccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCce
Confidence 2677666665 44444 4556656666677899999998886665 456666654 44432
Q ss_pred EEEEccCCCCEEEEEEecCCCEEEEEeCCC---eEEEEecCCCc
Q psy9327 156 ICVLTGHNHYVMCAQFHPTDDIVVSASLDQ---TIRVWDISGLR 196 (641)
Q Consensus 156 i~~l~~h~~~V~sl~fsp~g~~lvSgs~Dg---tI~IWD~~~~~ 196 (641)
..+..+........|+|+|++|+..+.++ .|.+||+.+++
T Consensus 321 -~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~ 363 (427)
T PRK02889 321 -QRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQ 363 (427)
T ss_pred -EEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCC
Confidence 22222334455788999999998777654 68999987754
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=4e-10 Score=124.24 Aligned_cols=275 Identities=12% Similarity=0.124 Sum_probs=186.1
Q ss_pred eEEEEEccCCCeEEEEeCCCcEEEEECccCccc-ccc---cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLL-EKF---DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 12 V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l-~~~---~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
-.++.+++.|.+.+... +..+.+|+..++... ..+ ..|.-++++.++||+++++++|.
T Consensus 163 ~~~I~~~~~ge~~~i~~-~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d----------------- 224 (792)
T KOG1963|consen 163 PKSIVDNNSGEFKGIVH-MCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGD----------------- 224 (792)
T ss_pred CccEEEcCCceEEEEEE-eeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEec-----------------
Confidence 35788888888766665 456889998775411 111 24777899999999999999998
Q ss_pred CcceeeEEEeeCCCeEEEEECCC--C--eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCC
Q psy9327 88 PCLFRIKSVLGDDYKIKVWNYKQ--R--KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg~I~vWD~~t--~--~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~ 163 (641)
.||+|.+|.--. + .....+.-|.+.|.+++|+++|.++.|||..+.+.+|.+.+++ ..-|..-.
T Consensus 225 -----------~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqfLPRLg 292 (792)
T KOG1963|consen 225 -----------SDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQFLPRLG 292 (792)
T ss_pred -----------cCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC-cccccccC
Confidence 899999996432 1 2245567799999999999999999999999999999999988 44556677
Q ss_pred CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCcee-------eecc---cCCCceeeeeeeeeeCCCeeE
Q psy9327 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLV-------LSMK---SKHPIWKYCKPVKYCNPKHTL 233 (641)
Q Consensus 164 ~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v-------~s~~---~~~~v~~~~~~l~s~~~d~~I 233 (641)
++|..+.++||++..+....|..|.+-...+.....++.|..... .++. ...| -...++.....+.|
T Consensus 293 s~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idp---r~~~~vln~~~g~v 369 (792)
T KOG1963|consen 293 SPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDP---RTNSLVLNGHPGHV 369 (792)
T ss_pred CeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcC---CCCceeecCCCceE
Confidence 899999999999999999999999999887776666665532220 0000 0111 01114445567788
Q ss_pred EEec-CCCcceeeec------------CCcceEEEEEcCCccEEEEecC----------CeEEEEEc--CCCCe---Eec
Q psy9327 234 HICN-RKMEPLCNIH------------ENTRVKSGAWDESGVFIYTTSN----------HIKYAIVN--GDHGI---IRT 285 (641)
Q Consensus 234 ~i~d-~~~~~~~~~~------------~~~~I~sla~~p~g~~L~t~s~----------~~k~~l~~--~~~g~---I~~ 285 (641)
.+|| .+...+..++ ....+++++.+-.|.+++|+-. ...+.+|. ++..+ ...
T Consensus 370 Q~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~ 449 (792)
T KOG1963|consen 370 QFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTK 449 (792)
T ss_pred EEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEE
Confidence 8888 2222222221 1235677888888999998742 22333443 33322 112
Q ss_pred cccc-----eEE--EEE-cCcEEEEEeCCCCeEEEEeCCcch
Q psy9327 286 LDLP-----IYI--TKI-KGNQVYYLDRECSPHVLRIDPTEF 319 (641)
Q Consensus 286 ~d~p-----~~~--~~~-~g~~v~~~~~dg~i~v~~~~~~~~ 319 (641)
++.| +.. ... ...+.++++.||.+++|.+...+-
T Consensus 450 I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n 491 (792)
T KOG1963|consen 450 INNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSN 491 (792)
T ss_pred EecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccc
Confidence 3344 111 111 223888999999999999954443
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.4e-10 Score=111.80 Aligned_cols=273 Identities=12% Similarity=0.133 Sum_probs=173.7
Q ss_pred CCeEEEEEccCCCeEEEE-eCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 10 ARVKGLSFHPKRPWILSS-LHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg-~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
+.|.-+.|..|.-+++++ ..|+.|++|++...+-..+++.-..++.+++|||||+.++..+
T Consensus 49 dki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~ts------------------ 110 (447)
T KOG4497|consen 49 DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTS------------------ 110 (447)
T ss_pred HHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeee------------------
Confidence 345566677666555444 5688999999999888888988999999999999998777666
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeC-C-------------------------
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD-D------------------------- 142 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~-D------------------------- 142 (641)
..|-.|.||.+.+.+.... .-....+.+++|+|+|++.+.++. |
T Consensus 111 ---------eF~lriTVWSL~t~~~~~~-~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~D 180 (447)
T KOG4497|consen 111 ---------EFDLRITVWSLNTQKGYLL-PHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTID 180 (447)
T ss_pred ---------cceeEEEEEEeccceeEEe-cccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCccc
Confidence 3899999999988765443 223345688999999987766643 1
Q ss_pred ----------CeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC--------
Q psy9327 143 ----------QTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM-------- 204 (641)
Q Consensus 143 ----------g~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~-------- 204 (641)
..+.|||---.-.+..+. ..-.+..+.|+|.+.+++.|+.||.+||-+--+.+....+-..
T Consensus 181 ltgieWsPdg~~laVwd~~Leykv~aYe-~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~ 259 (447)
T KOG4497|consen 181 LTGIEWSPDGNWLAVWDNVLEYKVYAYE-RGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTL 259 (447)
T ss_pred ccCceECCCCcEEEEecchhhheeeeee-eccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchh
Confidence 224444421111111111 2345788999999999999999999999876554443332110
Q ss_pred -------------Cceeeecc---------------------------------cCCC---ceeeeee-----eeee--C
Q psy9327 205 -------------GKLVLSMK---------------------------------SKHP---IWKYCKP-----VKYC--N 228 (641)
Q Consensus 205 -------------~~~v~s~~---------------------------------~~~~---v~~~~~~-----l~s~--~ 228 (641)
+...++.. ..+| +-.+.++ +++- +
T Consensus 260 ~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~ 339 (447)
T KOG4497|consen 260 HLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDK 339 (447)
T ss_pred hhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCC
Confidence 00000000 0001 0000110 1111 2
Q ss_pred CCeeEEEecCC-CcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEeccccc-----eEEEEEcCcEEEE
Q psy9327 229 PKHTLHICNRK-MEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLP-----IYITKIKGNQVYY 302 (641)
Q Consensus 229 ~d~~I~i~d~~-~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~p-----~~~~~~~g~~v~~ 302 (641)
.-+.+-+||.+ .+....+-...+|....|||....|+.+....++++|....-.+.....+ -..+...|..++.
T Consensus 340 ~PnalW~Wdlq~l~l~avLiQk~piraf~WdP~~prL~vctg~srLY~W~psg~~~V~vP~~GF~i~~l~W~~~g~~i~l 419 (447)
T KOG4497|consen 340 YPNALWLWDLQNLKLHAVLIQKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRVVGVPKKGFNIQKLQWLQPGEFIVL 419 (447)
T ss_pred CCceEEEEechhhhhhhhhhhccceeEEEeCCCCceEEEEcCCceEEEEcCCCceEEecCCCCceeeeEEecCCCcEEEE
Confidence 34678899944 44444555678999999999998899888888999998655333322222 1125566777777
Q ss_pred EeCCCCeEE
Q psy9327 303 LDRECSPHV 311 (641)
Q Consensus 303 ~~~dg~i~v 311 (641)
.+.|.-...
T Consensus 420 ~~kDafc~a 428 (447)
T KOG4497|consen 420 CGKDAFCVA 428 (447)
T ss_pred EcCCceEEE
Confidence 777765444
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.4e-10 Score=123.87 Aligned_cols=281 Identities=11% Similarity=0.095 Sum_probs=183.4
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECcc--C--cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRM--N--TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~--~--~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
.|.-.+++.++||.++++|+|..||.|.+|.--. + ...+.+.-|...|.+++|+++|.+|++||
T Consensus 203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG------------ 270 (792)
T KOG1963|consen 203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGG------------ 270 (792)
T ss_pred hhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecc------------
Confidence 3555689999999999999999999999997322 1 23445566899999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc-
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG- 161 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~- 161 (641)
..+.+-+|...+++ ..-+..-.++|..+.++||+.+.+....|..|.+-...+.....+..|
T Consensus 271 ----------------~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi 333 (792)
T KOG1963|consen 271 ----------------REGVLVLWQLETGK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGI 333 (792)
T ss_pred ----------------cceEEEEEeecCCC-cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCc
Confidence 99999999999988 333444567999999999999999999999999998765543333322
Q ss_pred ----------CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC-----Cce----eeeccc---CCCcee
Q psy9327 162 ----------HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM-----GKL----VLSMKS---KHPIWK 219 (641)
Q Consensus 162 ----------h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~-----~~~----v~s~~~---~~~v~~ 219 (641)
..+-.+.++++|.-+.++-.+..|+|.+||+.+-+.+..+... ... +...+. ...-|.
T Consensus 334 ~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~m 413 (792)
T KOG1963|consen 334 KPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWM 413 (792)
T ss_pred cCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEE
Confidence 2344678899997777888899999999999876665544311 011 000000 001111
Q ss_pred eeee-----eeeeCCCeeEEEecCCCcc-----eee--ecCCcceEE-EEEcCCcc-EEEEecCCeEEEEEcC-CCCeEe
Q psy9327 220 YCKP-----VKYCNPKHTLHICNRKMEP-----LCN--IHENTRVKS-GAWDESGV-FIYTTSNHIKYAIVNG-DHGIIR 284 (641)
Q Consensus 220 ~~~~-----l~s~~~d~~I~i~d~~~~~-----~~~--~~~~~~I~s-la~~p~g~-~L~t~s~~~k~~l~~~-~~g~I~ 284 (641)
.... .........+++|...... ... .+|+....+ +..++... ..++++.++.+.+|.. ++..++
T Consensus 414 aT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~ 493 (792)
T KOG1963|consen 414 ATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIY 493 (792)
T ss_pred EEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccC
Confidence 1111 1111235678899843221 111 233333333 34444433 7888888888877764 222222
Q ss_pred ccc-------------cceEE-EEEcCcEEEEEeCCCCeEEEEeCC
Q psy9327 285 TLD-------------LPIYI-TKIKGNQVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 285 ~~d-------------~p~~~-~~~~g~~v~~~~~dg~i~v~~~~~ 316 (641)
.-+ .|+.. ....++.+.+.+-|+.+.+|+.++
T Consensus 494 k~~s~W~c~~i~sy~k~~i~a~~fs~dGslla~s~~~~Itiwd~~~ 539 (792)
T KOG1963|consen 494 KKSSNWTCKAIGSYHKTPITALCFSQDGSLLAVSFDDTITIWDYDT 539 (792)
T ss_pred cCccceEEeeeeccccCcccchhhcCCCcEEEEecCCEEEEecCCC
Confidence 111 11111 112234777888889999998887
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.3e-10 Score=114.56 Aligned_cols=162 Identities=16% Similarity=0.211 Sum_probs=131.9
Q ss_pred ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC---eeEEEEccCCCCeE
Q psy9327 49 EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR---KCIFTLLGHLDYIR 125 (641)
Q Consensus 49 ~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~---~~~~~~~~h~~~V~ 125 (641)
.--++|+|.+|++|+..++.+. ....|.||..... +..+++..|+..|+
T Consensus 8 ~~~~pitchAwn~drt~iAv~~----------------------------~~~evhiy~~~~~~~w~~~htls~Hd~~vt 59 (361)
T KOG1523|consen 8 RLLEPITCHAWNSDRTQIAVSP----------------------------NNHEVHIYSMLGADLWEPAHTLSEHDKIVT 59 (361)
T ss_pred eccCceeeeeecCCCceEEecc----------------------------CCceEEEEEecCCCCceeceehhhhCccee
Confidence 3457999999999999999997 7889999987654 57889999999999
Q ss_pred EEEEccCCCEEEEEeCCCeEEEEECCC-C--eeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 126 TTFFHHEYPWILSASDDQTIRIWYWQS-R--NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 126 ~v~fsp~~~~l~sgs~Dg~I~vWd~~~-~--~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
+++|.|..+.|++++.|..-+||.... + ++...+..|+...+++.|+|.++.+++||....|.||-+.....
T Consensus 60 gvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENd----- 134 (361)
T KOG1523|consen 60 GVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQEND----- 134 (361)
T ss_pred EEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccc-----
Confidence 999999999999999999999999843 3 34556677999999999999999999999999999997654211
Q ss_pred CCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcC
Q psy9327 203 GMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 203 ~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~ 278 (641)
.-.| ++ ...+....|.++.|+|++..|++|+.|++..++..
T Consensus 135 ----WWVs-------------------Kh------------ikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSa 175 (361)
T KOG1523|consen 135 ----WWVS-------------------KH------------IKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSA 175 (361)
T ss_pred ----eehh-------------------hh------------hCCccccceeeeeccCCcceecccccCcceeEEEE
Confidence 0000 00 00112567899999999999999999999998853
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.1e-09 Score=108.02 Aligned_cols=176 Identities=12% Similarity=0.164 Sum_probs=133.3
Q ss_pred CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC-
Q psy9327 31 GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK- 109 (641)
Q Consensus 31 g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~- 109 (641)
..|.|||=....++..+ ....+|.++.++++ .+++. ..++|.||.+.
T Consensus 75 NkviIWDD~k~~~i~el-~f~~~I~~V~l~r~--riVvv-----------------------------l~~~I~VytF~~ 122 (346)
T KOG2111|consen 75 NKVIIWDDLKERCIIEL-SFNSEIKAVKLRRD--RIVVV-----------------------------LENKIYVYTFPD 122 (346)
T ss_pred ceEEEEecccCcEEEEE-EeccceeeEEEcCC--eEEEE-----------------------------ecCeEEEEEcCC
Confidence 46999995556666666 46789999999776 45555 57899999987
Q ss_pred CCeeEEEEccCCCC--eEEEEEccCCCEEEE-EeCCCeEEEEECCCCee--EEEEccCCCCEEEEEEecCCCEEEEEeCC
Q psy9327 110 QRKCIFTLLGHLDY--IRTTFFHHEYPWILS-ASDDQTIRIWYWQSRNC--ICVLTGHNHYVMCAQFHPTDDIVVSASLD 184 (641)
Q Consensus 110 t~~~~~~~~~h~~~--V~~v~fsp~~~~l~s-gs~Dg~I~vWd~~~~~~--i~~l~~h~~~V~sl~fsp~g~~lvSgs~D 184 (641)
+-+.++.++....| ..+++-+.+..+||. |-.-|.|.|-|+...+. .....+|...|.|++.+.+|..++|+|..
T Consensus 123 n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStk 202 (346)
T KOG2111|consen 123 NPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTK 202 (346)
T ss_pred ChhheeeeecccCCCceEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccC
Confidence 45666666544333 434433334445554 44568999999976554 46788999999999999999999999999
Q ss_pred Ce-EEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccE
Q psy9327 185 QT-IRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVF 263 (641)
Q Consensus 185 gt-I~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~ 263 (641)
|| |||||..+++.+..+.. + .....|.+++|+|+..+
T Consensus 203 GTLIRIFdt~~g~~l~E~RR------------------------------------G------~d~A~iy~iaFSp~~s~ 240 (346)
T KOG2111|consen 203 GTLIRIFDTEDGTLLQELRR------------------------------------G------VDRADIYCIAFSPNSSW 240 (346)
T ss_pred cEEEEEEEcCCCcEeeeeec------------------------------------C------CchheEEEEEeCCCccE
Confidence 97 89999999888777652 1 13567888999999999
Q ss_pred EEEecCCeEEEEEcCCC
Q psy9327 264 IYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 264 L~t~s~~~k~~l~~~~~ 280 (641)
|+..|+.|.+.++..++
T Consensus 241 LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 241 LAVSSDKGTLHIFSLRD 257 (346)
T ss_pred EEEEcCCCeEEEEEeec
Confidence 99999999998887554
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=5.7e-11 Score=123.97 Aligned_cols=191 Identities=19% Similarity=0.244 Sum_probs=133.4
Q ss_pred ccCCCeEEEEeCCCcEEEEECccCcccccccc----cccCeEEEEEeCCCCEEEEec--eeeEEeeeceeeecccCCcce
Q psy9327 18 HPKRPWILSSLHNGVIQLWDYRMNTLLEKFDE----HEGPVRGICFHNQQPIFVSGG--KMIVMAYQGCILESRNEPCLF 91 (641)
Q Consensus 18 spdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~----h~~~V~~i~fsp~~~~l~sgs--~~~~~~~~~~~~~~~~~~~~~ 91 (641)
.|++--++.|-..|.|++.|....+..+.|.. ....|+|+.|-|.++-++..+ ....+.++.........|...
T Consensus 182 ~~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~ 261 (636)
T KOG2394|consen 182 TPKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQ 261 (636)
T ss_pred CCCCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCccc
Confidence 34566788999999999999766433332321 347899999998655333332 233344433333333333322
Q ss_pred eeEEEeeCCCeEEEEECCC-CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEE
Q psy9327 92 RIKSVLGDDYKIKVWNYKQ-RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQ 170 (641)
Q Consensus 92 ~~~~~~s~Dg~I~vWD~~t-~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~ 170 (641)
..-- +..-.|..|-... ..++..+.-..+.|...+|+|||++||+.|.||.+||+|+.+.+.+..++.--+...|++
T Consensus 262 ~~k~--~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvc 339 (636)
T KOG2394|consen 262 ALKD--GDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVC 339 (636)
T ss_pred ccCC--CCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEE
Confidence 2210 0111233332222 244555555567899999999999999999999999999999888777777778899999
Q ss_pred EecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeee
Q psy9327 171 FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLS 210 (641)
Q Consensus 171 fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s 210 (641)
|+|||++|++|++|.-|.||.+..++.+..-.+|..+|..
T Consensus 340 WSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~ 379 (636)
T KOG2394|consen 340 WSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSV 379 (636)
T ss_pred EcCCccEEEecCCcceEEEEEeccceEEEeccccccceee
Confidence 9999999999999999999999999888888888777765
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.5e-11 Score=117.95 Aligned_cols=221 Identities=14% Similarity=0.129 Sum_probs=152.9
Q ss_pred EEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceee
Q psy9327 14 GLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRI 93 (641)
Q Consensus 14 ~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~ 93 (641)
-++|||+|+++|+++.. .+.|=|..+-+...-|. .-..|.-|.|.-+..+++++.
T Consensus 13 ~c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~-cldki~yieW~ads~~ilC~~----------------------- 67 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFL-CLDKIVYIEWKADSCHILCVA----------------------- 67 (447)
T ss_pred ceeECCCCCeeeeeeee-EEEEeccchhhHHHHHH-HHHHhhheeeeccceeeeeee-----------------------
Confidence 35899999999999876 78888888776655553 345677799999998888887
Q ss_pred EEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEE-EEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEe
Q psy9327 94 KSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFH 172 (641)
Q Consensus 94 ~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~-sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fs 172 (641)
..|+.|++|++...+...++....+++..++|+|+|+.++ +...|-.|.||.+.+..+... .-....+..++|+
T Consensus 68 ----yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~-~~pK~~~kg~~f~ 142 (447)
T KOG4497|consen 68 ----YKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLL-PHPKTNVKGYAFH 142 (447)
T ss_pred ----eccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEe-cccccCceeEEEC
Confidence 4899999999999988889998899999999999997655 566789999999998776533 2234557899999
Q ss_pred cCCCEEEEEeCCCe---EEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcce-eeecC
Q psy9327 173 PTDDIVVSASLDQT---IRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPL-CNIHE 248 (641)
Q Consensus 173 p~g~~lvSgs~Dgt---I~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~-~~~~~ 248 (641)
|+|++.+.++.-.. +.|..-+.......+.. . .+....--|. ..+..+.+||.-++-. ...+-
T Consensus 143 ~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~---d--T~DltgieWs--------Pdg~~laVwd~~Leykv~aYe~ 209 (447)
T KOG4497|consen 143 PDGQFCAILSRRDCKDYVQISSCKAWILLKEFKL---D--TIDLTGIEWS--------PDGNWLAVWDNVLEYKVYAYER 209 (447)
T ss_pred CCCceeeeeecccHHHHHHHHhhHHHHHHHhcCC---C--cccccCceEC--------CCCcEEEEecchhhheeeeeee
Confidence 99999887775311 11111111111111100 0 0000011111 2566788888655433 23334
Q ss_pred CcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 249 NTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 249 ~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
+..+..++|+|.+++|+.|+.|+.+.+.|
T Consensus 210 ~lG~k~v~wsP~~qflavGsyD~~lrvln 238 (447)
T KOG4497|consen 210 GLGLKFVEWSPCNQFLAVGSYDQMLRVLN 238 (447)
T ss_pred ccceeEEEeccccceEEeeccchhhhhhc
Confidence 67788889999888999888887777665
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.1e-10 Score=113.07 Aligned_cols=119 Identities=15% Similarity=0.277 Sum_probs=94.7
Q ss_pred CCCeEEEEEccCCCeEEEE--eCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeeccc
Q psy9327 9 SARVKGLSFHPKRPWILSS--LHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRN 86 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg--~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~ 86 (641)
.++|.+++|+|+|+.+|+. ..++.|.+||.+ ++.+..+ +..+++.|.|+|+|+++++++.
T Consensus 59 ~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~--~~~~~n~i~wsP~G~~l~~~g~--------------- 120 (194)
T PF08662_consen 59 EGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSF--GTQPRNTISWSPDGRFLVLAGF--------------- 120 (194)
T ss_pred CCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEee--cCCCceEEEECCCCCEEEEEEc---------------
Confidence 4579999999999987644 457899999996 6666666 3568889999999999999871
Q ss_pred CCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeC------CCeEEEEECCCCeeEEE
Q psy9327 87 EPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD------DQTIRIWYWQSRNCICV 158 (641)
Q Consensus 87 ~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~------Dg~I~vWd~~~~~~i~~ 158 (641)
+...|.|.+||.++.+.+.++. |. .+..++|+|+|++|++++. |..++||++. |+.+..
T Consensus 121 ----------~n~~G~l~~wd~~~~~~i~~~~-~~-~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l~~ 185 (194)
T PF08662_consen 121 ----------GNLNGDLEFWDVRKKKKISTFE-HS-DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLLYK 185 (194)
T ss_pred ----------cCCCcEEEEEECCCCEEeeccc-cC-cEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEeEe
Confidence 1135789999999999888775 43 4789999999999998874 7889999985 555543
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.2e-09 Score=116.36 Aligned_cols=289 Identities=10% Similarity=0.092 Sum_probs=173.6
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+.+++...+.-..+.|+|||+++++++.||.|.++|+.+++.+.+++... ...++++++||++++++.
T Consensus 29 ~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~-~~~~i~~s~DG~~~~v~n----------- 96 (369)
T PF02239_consen 29 VARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGG-NPRGIAVSPDGKYVYVAN----------- 96 (369)
T ss_dssp EEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SS-EEEEEEE--TTTEEEEEE-----------
T ss_pred EEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCC-CcceEEEcCCCCEEEEEe-----------
Confidence 34566554444557899999999999999999999999999999886544 457899999999999987
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccC-------CCCeEEEEEccCCCEEEEEeC-CCeEEEEECCCC
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH-------LDYIRTTFFHHEYPWILSASD-DQTIRIWYWQSR 153 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h-------~~~V~~v~fsp~~~~l~sgs~-Dg~I~vWd~~~~ 153 (641)
..++.+.++|.++.+++.++... ...+.++..+|..+.++.+-. .+.|.+-|+...
T Consensus 97 ----------------~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~ 160 (369)
T PF02239_consen 97 ----------------YEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDP 160 (369)
T ss_dssp ----------------EETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTS
T ss_pred ----------------cCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccc
Confidence 37999999999999998887542 346788888998886655554 588888898765
Q ss_pred eeEE-EEccCCCCEEEEEEecCCCEEEE-EeCCCeEEEEecCCCceeeeccC----CCceeeecccCCC----ceeeeee
Q psy9327 154 NCIC-VLTGHNHYVMCAQFHPTDDIVVS-ASLDQTIRVWDISGLRKKNVAPG----MGKLVLSMKSKHP----IWKYCKP 223 (641)
Q Consensus 154 ~~i~-~l~~h~~~V~sl~fsp~g~~lvS-gs~DgtI~IWD~~~~~~~~~~~~----~~~~v~s~~~~~~----v~~~~~~ 223 (641)
+.+. +............|+|++++++. +..+..|-++|..+++....+.. +..... ...|| +|.....
T Consensus 161 ~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~--~~php~~g~vw~~~~~ 238 (369)
T PF02239_consen 161 KNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGA--NFPHPGFGPVWATSGL 238 (369)
T ss_dssp SCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEE--EEEETTTEEEEEEEBS
T ss_pred cccceeeecccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccc--cccCCCcceEEeeccc
Confidence 4332 23234556778999999997665 45677999999998877665432 111111 11233 3433211
Q ss_pred ---eeeeCCCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEe----cCCeEEEEEcCCCCe-Eecccc-----c
Q psy9327 224 ---VKYCNPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTT----SNHIKYAIVNGDHGI-IRTLDL-----P 289 (641)
Q Consensus 224 ---l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~----s~~~k~~l~~~~~g~-I~~~d~-----p 289 (641)
..+.-..+.+.+|| ...+.+..+...+.-.-+..+|++.++|.. .....+.+++.++-. +..+.. +
T Consensus 239 ~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~glFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~ 318 (369)
T PF02239_consen 239 GYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGGLFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRV 318 (369)
T ss_dssp SSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS--EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--E
T ss_pred cceecccccCCccccchhhcCeEEEEEECCCCcceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcE
Confidence 11111223344555 455666666653333677889999999998 345677888877653 344321 1
Q ss_pred eEE-EEEcCcEEEEEeCCC--CeEEEEeCCcchh
Q psy9327 290 IYI-TKIKGNQVYYLDREC--SPHVLRIDPTEFK 320 (641)
Q Consensus 290 ~~~-~~~~g~~v~~~~~dg--~i~v~~~~~~~~~ 320 (641)
+.. +..+|..+|....++ .+.+++-.+.+..
T Consensus 319 ~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~ 352 (369)
T PF02239_consen 319 VHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLKEK 352 (369)
T ss_dssp EEEEE-TTSSEEEEEEE--TTEEEEEETTTTEEE
T ss_pred eccEECCCCCEEEEEEecCCCEEEEEECCCcEEE
Confidence 111 345677776655443 5777766654443
|
... |
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.27 E-value=8.1e-10 Score=120.44 Aligned_cols=165 Identities=13% Similarity=0.081 Sum_probs=119.5
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCC---CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHN---GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~d---g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
+.+..+.+.+.+.+|+|||++|+.+..+ ..|.+||+.+++.. .+..+.+.+.+++|+|++..|+....
T Consensus 183 ~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~-~~~~~~~~~~~~~~spDg~~l~~~~~-------- 253 (417)
T TIGR02800 183 QTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQRE-KVASFPGMNGAPAFSPDGSKLAVSLS-------- 253 (417)
T ss_pred EEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEE-EeecCCCCccceEECCCCCEEEEEEC--------
Confidence 3455566778999999999999877653 47999999887542 33345667778999999997765431
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC-C--eEEEEECCCCeeE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD-Q--TIRIWYWQSRNCI 156 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D-g--~I~vWd~~~~~~i 156 (641)
...+..|.+||+.+++. ..+..+.+.....+|+|++++|+.+++. + .|++||..+++.
T Consensus 254 -----------------~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~- 314 (417)
T TIGR02800 254 -----------------KDGNPDIYVMDLDGKQL-TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEV- 314 (417)
T ss_pred -----------------CCCCccEEEEECCCCCE-EECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCE-
Confidence 01234699999987764 3444455556677999999988776653 2 688888877654
Q ss_pred EEEccCCCCEEEEEEecCCCEEEEEeCCC---eEEEEecCCC
Q psy9327 157 CVLTGHNHYVMCAQFHPTDDIVVSASLDQ---TIRVWDISGL 195 (641)
Q Consensus 157 ~~l~~h~~~V~sl~fsp~g~~lvSgs~Dg---tI~IWD~~~~ 195 (641)
..+..+...+....|+|+|++++.++.++ .|.+||+.++
T Consensus 315 ~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~ 356 (417)
T TIGR02800 315 RRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGG 356 (417)
T ss_pred EEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCC
Confidence 34444566778899999999999888776 7888887663
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.9e-11 Score=127.48 Aligned_cols=123 Identities=25% Similarity=0.356 Sum_probs=108.9
Q ss_pred ccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE-ccCCCC
Q psy9327 45 EKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL-LGHLDY 123 (641)
Q Consensus 45 ~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~-~~h~~~ 123 (641)
..+.+|.+.|+|++|+.+|.+|++|+ +|..+.|||.-..++++.+ .+|...
T Consensus 44 ~eL~GH~GCVN~LeWn~dG~lL~SGS----------------------------DD~r~ivWd~~~~KllhsI~TgHtaN 95 (758)
T KOG1310|consen 44 AELTGHTGCVNCLEWNADGELLASGS----------------------------DDTRLIVWDPFEYKLLHSISTGHTAN 95 (758)
T ss_pred hhhccccceecceeecCCCCEEeecC----------------------------CcceEEeecchhcceeeeeecccccc
Confidence 45679999999999999999999998 9999999999988888876 579999
Q ss_pred eEEEEEcc--CCCEEEEEeCCCeEEEEECCC----------CeeEEEEccCCCCEEEEEEecCC-CEEEEEeCCCeEEEE
Q psy9327 124 IRTTFFHH--EYPWILSASDDQTIRIWYWQS----------RNCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVW 190 (641)
Q Consensus 124 V~~v~fsp--~~~~l~sgs~Dg~I~vWd~~~----------~~~i~~l~~h~~~V~sl~fsp~g-~~lvSgs~DgtI~IW 190 (641)
|.++.|-| ++..++||+.|..|+++|+.. ....+.+..|...|..++-.|++ +.+.|++.||+++-+
T Consensus 96 IFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQy 175 (758)
T KOG1310|consen 96 IFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQY 175 (758)
T ss_pred eeEEeeeccCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeee
Confidence 99999999 456899999999999999974 23455567899999999999988 789999999999999
Q ss_pred ecCCC
Q psy9327 191 DISGL 195 (641)
Q Consensus 191 D~~~~ 195 (641)
|++..
T Consensus 176 DiREp 180 (758)
T KOG1310|consen 176 DIREP 180 (758)
T ss_pred cccCC
Confidence 99863
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.2e-09 Score=117.68 Aligned_cols=139 Identities=11% Similarity=0.037 Sum_probs=102.9
Q ss_pred CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC
Q psy9327 31 GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ 110 (641)
Q Consensus 31 g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t 110 (641)
..|.+||.+ +.....+..|..++.+.+|+|||..|+..+.. ..+..|.+||+.+
T Consensus 182 ~~l~~~d~d-g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~-------------------------~g~~~i~~~dl~~ 235 (435)
T PRK05137 182 KRLAIMDQD-GANVRYLTDGSSLVLTPRFSPNRQEITYMSYA-------------------------NGRPRVYLLDLET 235 (435)
T ss_pred eEEEEECCC-CCCcEEEecCCCCeEeeEECCCCCEEEEEEec-------------------------CCCCEEEEEECCC
Confidence 478899975 44456666788899999999999988877510 1357899999998
Q ss_pred CeeEEEEccCCCCeEEEEEccCCCEEE-EEeCCC--eEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeC-CC-
Q psy9327 111 RKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQ--TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL-DQ- 185 (641)
Q Consensus 111 ~~~~~~~~~h~~~V~~v~fsp~~~~l~-sgs~Dg--~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~-Dg- 185 (641)
++.. .+..+.+.+...+|+|+|+.++ +.+.++ .|++||..++.. ..+..+........|+|||+.|+.++. +|
T Consensus 236 g~~~-~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~ 313 (435)
T PRK05137 236 GQRE-LVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGS 313 (435)
T ss_pred CcEE-EeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCC
Confidence 8753 4555667788899999999775 555555 488889887764 456667667788999999998887764 33
Q ss_pred -eEEEEecCCCce
Q psy9327 186 -TIRVWDISGLRK 197 (641)
Q Consensus 186 -tI~IWD~~~~~~ 197 (641)
.|.+||+.++..
T Consensus 314 ~~Iy~~d~~g~~~ 326 (435)
T PRK05137 314 PQLYVMNADGSNP 326 (435)
T ss_pred CeEEEEECCCCCe
Confidence 577777765443
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.23 E-value=2e-09 Score=106.26 Aligned_cols=156 Identities=15% Similarity=0.260 Sum_probs=122.0
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECc-cCcccccccccccC--eEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYR-MNTLLEKFDEHEGP--VRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~-~~~~l~~~~~h~~~--V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
.++|.++.++++ .+++.. .+.|.+|.+. ..+.++.++....| ..+++=+.+..+|+.-|
T Consensus 94 ~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg--------------- 155 (346)
T KOG2111|consen 94 NSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPG--------------- 155 (346)
T ss_pred ccceeeEEEcCC--eEEEEe-cCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCC---------------
Confidence 467888888765 456655 4679999997 55667766544332 33333233444555555
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCee--EEEEccCCCCeEEEEEccCCCEEEEEeCCCe-EEEEECCCCeeEEEEccC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFHHEYPWILSASDDQT-IRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~--~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~-I~vWd~~~~~~i~~l~~h 162 (641)
-.-|.|+|-|+...+. ...+.+|+..|.|++.+-+|..+||||..|+ |||||..+++.+..++.-
T Consensus 156 ------------~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG 223 (346)
T KOG2111|consen 156 ------------FKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRG 223 (346)
T ss_pred ------------CccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecC
Confidence 2779999999986654 4778899999999999999999999999997 899999999999998643
Q ss_pred --CCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 163 --NHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 163 --~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
...|.+++|||++.+|+++|+-||+.||.++.
T Consensus 224 ~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 224 VDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred CchheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence 34699999999999999999999999999875
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.8e-11 Score=124.28 Aligned_cols=151 Identities=13% Similarity=0.267 Sum_probs=133.8
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
.+|..+.|-|-.-+|++++..|.++--|+.+|+++..+....+++..++-+|-+..+-.|.
T Consensus 210 ~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~Gh------------------- 270 (545)
T KOG1272|consen 210 IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGH------------------- 270 (545)
T ss_pred CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcC-------------------
Confidence 5689999999998999999999999999999999999999999999999999888888887
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl 169 (641)
..|+|.+|...+.+++..+..|.++|++++++++|.+++++|.|..++|||++.-..+.++.. ..+...+
T Consensus 271 ---------snGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a~~l 340 (545)
T KOG1272|consen 271 ---------SNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT-PHPASNL 340 (545)
T ss_pred ---------CCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec-CCCcccc
Confidence 899999999999999999999999999999999999999999999999999998776666654 4567788
Q ss_pred EEecCCCEEEEEeCCCeEEEEe
Q psy9327 170 QFHPTDDIVVSASLDQTIRVWD 191 (641)
Q Consensus 170 ~fsp~g~~lvSgs~DgtI~IWD 191 (641)
+||..| ++.+|....|.||.
T Consensus 341 s~Sqkg--lLA~~~G~~v~iw~ 360 (545)
T KOG1272|consen 341 SLSQKG--LLALSYGDHVQIWK 360 (545)
T ss_pred cccccc--ceeeecCCeeeeeh
Confidence 888655 44455556899994
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.8e-09 Score=106.15 Aligned_cols=267 Identities=18% Similarity=0.247 Sum_probs=182.9
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECc----cCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeec-----
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYR----MNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG----- 79 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~----~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~----- 79 (641)
.+++++++++++...|+.|-.+|++.-+.+. ....++.+..|.++|..+-|+....++++.+...-+.|..
T Consensus 68 P~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~ 147 (404)
T KOG1409|consen 68 PSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGN 147 (404)
T ss_pred CCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCC
Confidence 4789999999999999999999999888653 4455677788999999999999999999998665555532
Q ss_pred ----eeeeccc--CCcceeeEEEeeCCCeEEEEECC--CCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC
Q psy9327 80 ----CILESRN--EPCLFRIKSVLGDDYKIKVWNYK--QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151 (641)
Q Consensus 80 ----~~~~~~~--~~~~~~~~~~~s~Dg~I~vWD~~--t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~ 151 (641)
....... .+....+...|-..|.|..-.+. .-.++.++.+|.+++.+++|.+....+.||..|..|.+||+.
T Consensus 148 ~lg~Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdig 227 (404)
T KOG1409|consen 148 RLGGYNFETPASALQFDALYAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIG 227 (404)
T ss_pred cccceEeeccCCCCceeeEEEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEecc
Confidence 2221111 11122244455556666555443 346788999999999999999999999999999999999997
Q ss_pred CCe-eEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCcee-----------
Q psy9327 152 SRN-CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWK----------- 219 (641)
Q Consensus 152 ~~~-~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~----------- 219 (641)
-++ ....+.+|.+.|..+..-+--..++|++.||.|-+||+...+... |..-..-.+-...+|.+-
T Consensus 228 g~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~r~et--pewl~s~~cQ~c~qpffwn~~~m~~~k~~ 305 (404)
T KOG1409|consen 228 GRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVKRVET--PEWLDSDSCQKCNQPFFWNFRQMWDRKQL 305 (404)
T ss_pred CCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccceeecC--ccccccchhhhhCchHHHHHHHHHhhhhh
Confidence 654 456778999999999888778899999999999999998644321 110000000011111000
Q ss_pred ----------------eee----eeeeeCCCeeEEEec--------CCCcceeeecC-CcceEEEEEcCCccEEEEecCC
Q psy9327 220 ----------------YCK----PVKYCNPKHTLHICN--------RKMEPLCNIHE-NTRVKSGAWDESGVFIYTTSNH 270 (641)
Q Consensus 220 ----------------~~~----~l~s~~~d~~I~i~d--------~~~~~~~~~~~-~~~I~sla~~p~g~~L~t~s~~ 270 (641)
.+. .....+.+-.+++.| ....+++..++ ...|+.+.++.+-..|+|++.+
T Consensus 306 glr~h~crkcg~avc~~c~s~~~~~p~mg~e~~vR~~~~c~~~i~~~~~t~LA~phei~tgItamhlqetlglLvTsG~~ 385 (404)
T KOG1409|consen 306 GLRQHHCRKCGKAVCGKCSSNRSSYPTMGFEFSVRVCDSCYPTIKDEERTPLAIPHEIKTGITAMHLQETLGLLVTSGTD 385 (404)
T ss_pred hhhhhhhhhhhhhcCcccccCccccccccceeEEEEecccchhhhcCCCCccccccccccceeEEEhhhhccceeecCCc
Confidence 000 011222333455544 33345666666 6678888888887788886666
Q ss_pred eEEEEEc
Q psy9327 271 IKYAIVN 277 (641)
Q Consensus 271 ~k~~l~~ 277 (641)
.-+.||+
T Consensus 386 Rvi~iwd 392 (404)
T KOG1409|consen 386 RVIKIWD 392 (404)
T ss_pred eEEEEEe
Confidence 6666665
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.9e-10 Score=113.98 Aligned_cols=161 Identities=12% Similarity=0.182 Sum_probs=132.6
Q ss_pred CeEEEEEccCCC-eEEEEeCC--CcEEEEECccCccccccccc---------ccCeEEEEEeCC--CCEEEEeceeeEEe
Q psy9327 11 RVKGLSFHPKRP-WILSSLHN--GVIQLWDYRMNTLLEKFDEH---------EGPVRGICFHNQ--QPIFVSGGKMIVMA 76 (641)
Q Consensus 11 ~V~~l~fspdg~-~Lasg~~d--g~I~iWD~~~~~~l~~~~~h---------~~~V~~i~fsp~--~~~l~sgs~~~~~~ 76 (641)
.+..+.-+|..+ .+|+||.. ..++|||+...+.+.+-+.- .-.++++.|-|. ...|+++.
T Consensus 150 g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T------ 223 (412)
T KOG3881|consen 150 GLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATIT------ 223 (412)
T ss_pred ceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEe------
Confidence 344555555444 55668888 88999999887655443221 124677888877 67788886
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCC-eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~-~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
.-+.+++||.+.+ +++..|.--+.+++++...|+++++.+|..-+.+..+|.+.++.
T Consensus 224 ----------------------~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl 281 (412)
T KOG3881|consen 224 ----------------------RYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKL 281 (412)
T ss_pred ----------------------cceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCcee
Confidence 8999999999865 68888888889999999999999999999999999999999998
Q ss_pred EEE-EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceee
Q psy9327 156 ICV-LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKN 199 (641)
Q Consensus 156 i~~-l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~ 199 (641)
+.. +.+-.+.|+++..||.++++++++.|..+||+|+++.+.+.
T Consensus 282 ~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~ 326 (412)
T KOG3881|consen 282 LGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLH 326 (412)
T ss_pred eccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhh
Confidence 766 88999999999999999999999999999999999855543
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.19 E-value=9.7e-10 Score=123.11 Aligned_cols=150 Identities=22% Similarity=0.324 Sum_probs=128.8
Q ss_pred EEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeE
Q psy9327 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIK 94 (641)
Q Consensus 15 l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~ 94 (641)
+-++++.-++++|+.-|.|.+|+...-+.-..+.+|.+.+..+.|+.||.++++.+
T Consensus 139 ~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~S------------------------ 194 (967)
T KOG0974|consen 139 IGDSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVS------------------------ 194 (967)
T ss_pred EeccCcEEEEEeccccccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEe------------------------
Confidence 34566777899999999999999873333335779999999999999999999998
Q ss_pred EEeeCCCeEEEEECCCCeeEE-EEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCC-CEEEEEEe
Q psy9327 95 SVLGDDYKIKVWNYKQRKCIF-TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNH-YVMCAQFH 172 (641)
Q Consensus 95 ~~~s~Dg~I~vWD~~t~~~~~-~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~-~V~sl~fs 172 (641)
+|.++++|++.+++... +.-+|...|..++|+|. .+++++.|.+.++|+.. +..+.++.+|.. .+..++.+
T Consensus 195 ----dDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~-~~~l~~y~~h~g~~iw~~~~~ 267 (967)
T KOG0974|consen 195 ----DDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVN-GTQLEVYDEHSGKGIWKIAVP 267 (967)
T ss_pred ----cCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEecc-cceehhhhhhhhcceeEEEEc
Confidence 99999999999987765 66789999999999998 79999999999999765 444558888865 58899999
Q ss_pred cCCCEEEEEeCCCeEEEEecCCC
Q psy9327 173 PTDDIVVSASLDQTIRVWDISGL 195 (641)
Q Consensus 173 p~g~~lvSgs~DgtI~IWD~~~~ 195 (641)
++..+++|++.|+++++||..+.
T Consensus 268 ~~~~~~vT~g~Ds~lk~~~l~~r 290 (967)
T KOG0974|consen 268 IGVIIKVTGGNDSTLKLWDLNGR 290 (967)
T ss_pred CCceEEEeeccCcchhhhhhhcc
Confidence 99999999999999999998653
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.3e-10 Score=113.07 Aligned_cols=161 Identities=22% Similarity=0.287 Sum_probs=122.2
Q ss_pred ccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC------CCeeEEEEcc-
Q psy9327 47 FDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK------QRKCIFTLLG- 119 (641)
Q Consensus 47 ~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~------t~~~~~~~~~- 119 (641)
+.+|.+.|++|.|+.++.||++|| +|..+++|++. +.+++.....
T Consensus 52 ~~~H~GCiNAlqFS~N~~~L~SGG----------------------------DD~~~~~W~~de~~~~k~~KPI~~~~~~ 103 (609)
T KOG4227|consen 52 VREHTGCINALQFSHNDRFLASGG----------------------------DDMHGRVWNVDELMVRKTPKPIGVMEHP 103 (609)
T ss_pred hhhhccccceeeeccCCeEEeecC----------------------------CcceeeeechHHHHhhcCCCCceeccCc
Confidence 457999999999999999999998 99999999974 3466666544
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCC---CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCc
Q psy9327 120 HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN---HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196 (641)
Q Consensus 120 h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~---~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~ 196 (641)
|...|.|++|......+.||+.+++|...|+.+.+.+..+. |. +.|..+.-||..+.+++.+.++.|.+||.+...
T Consensus 104 H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~-~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~ 182 (609)
T KOG4227|consen 104 HRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVAN-ENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQ 182 (609)
T ss_pred cccceEEEEEccCCeeEecCCCcceeEeeecccceeeeeec-ccCcccceeecccCCCCceEEEEecCceEEEEeccCCC
Confidence 55899999999999999999999999999999999888875 44 489999999999999999999999999998754
Q ss_pred e-ee-ecc-CCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC
Q psy9327 197 K-KN-VAP-GMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK 239 (641)
Q Consensus 197 ~-~~-~~~-~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~ 239 (641)
. .. .++ ..++...+ ..+||+-.. .+++.++.+-+.+||.+
T Consensus 183 ~~~~~~~~AN~~~~F~t-~~F~P~~P~--Li~~~~~~~G~~~~D~R 225 (609)
T KOG4227|consen 183 NPISLVLPANSGKNFYT-AEFHPETPA--LILVNSETGGPNVFDRR 225 (609)
T ss_pred CCCceeeecCCCcccee-eeecCCCce--eEEeccccCCCCceeec
Confidence 1 11 111 11122222 223332211 14455666777777744
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.17 E-value=6.5e-10 Score=124.52 Aligned_cols=196 Identities=21% Similarity=0.248 Sum_probs=140.7
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccccccc----CeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEG----PVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~----~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
+.|....+.-+...++.+..+..+-+||...+..+.+....+. +..-+-++++.-++++|+
T Consensus 88 ~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gs--------------- 152 (967)
T KOG0974|consen 88 DWIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGS--------------- 152 (967)
T ss_pred ccccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEecc---------------
Confidence 3344445555666788888889999999988777666643221 223344556666777776
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE-EEccCCC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC-VLTGHNH 164 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~-~l~~h~~ 164 (641)
--+.|.+|+......-..+.+|.+.+..+.|+.+|.++++.|+|+++++|++.+++... +.-+|+.
T Consensus 153 -------------v~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsa 219 (967)
T KOG0974|consen 153 -------------VFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSA 219 (967)
T ss_pred -------------ccccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccc
Confidence 88999999987433333588999999999999999999999999999999999988665 6678999
Q ss_pred CEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC-CceeeecccCCCceeeeeeeeeeCCCeeEEEecCCC
Q psy9327 165 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM-GKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKM 240 (641)
Q Consensus 165 ~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~-~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~ 240 (641)
+|..++|+|+ .++|++.|.+.++|+....+.. .+.+| ++.+......... .-..++..|+.+++|+...
T Consensus 220 Rvw~~~~~~n--~i~t~gedctcrvW~~~~~~l~-~y~~h~g~~iw~~~~~~~~----~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 220 RVWACCFLPN--RIITVGEDCTCRVWGVNGTQLE-VYDEHSGKGIWKIAVPIGV----IIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred eeEEEEeccc--eeEEeccceEEEEEecccceeh-hhhhhhhcceeEEEEcCCc----eEEEeeccCcchhhhhhhc
Confidence 9999999988 9999999999999977654433 33332 2222211111000 0145677888888888543
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.5e-09 Score=113.58 Aligned_cols=185 Identities=15% Similarity=0.148 Sum_probs=148.0
Q ss_pred ccCCCeEEEEeCCCcEEEEECccCcccccccc---cccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeE
Q psy9327 18 HPKRPWILSSLHNGVIQLWDYRMNTLLEKFDE---HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIK 94 (641)
Q Consensus 18 spdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~---h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~ 94 (641)
.|.+.++|....||.+++||..++++-..|.. -++...+..|. |....+ . --+-+..+...........
T Consensus 2 ~~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~-----L~~~~s-~--~k~~~~~~~~~~s~~t~~l 73 (541)
T KOG4547|consen 2 PPALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWG-----LSADYS-P--MKWLSLEKAKKASLDTSML 73 (541)
T ss_pred CchhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEE-----EEeccc-h--HHHHhHHHHhhccCCceEE
Confidence 35567899999999999999998887766643 34555666665 222210 0 0011112222333455666
Q ss_pred EEeeCCCeEEEEECCCCeeEEEEc--cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEe
Q psy9327 95 SVLGDDYKIKVWNYKQRKCIFTLL--GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFH 172 (641)
Q Consensus 95 ~~~s~Dg~I~vWD~~t~~~~~~~~--~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fs 172 (641)
+-|...|.|.+|+...|+....+. .|.+.|.++.++.+-..|.|++.|+.+..|+..+.+.++.+.+....+.+++.+
T Consensus 74 vlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is 153 (541)
T KOG4547|consen 74 VLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCIS 153 (541)
T ss_pred EeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEc
Confidence 777899999999999999888876 599999999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecc
Q psy9327 173 PTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMK 212 (641)
Q Consensus 173 p~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~ 212 (641)
|||..+++||. .|++||+.+.+...+++||+.+|.++.
T Consensus 154 ~D~~~l~~as~--~ik~~~~~~kevv~~ftgh~s~v~t~~ 191 (541)
T KOG4547|consen 154 PDGKILLTASR--QIKVLDIETKEVVITFTGHGSPVRTLS 191 (541)
T ss_pred CCCCEEEeccc--eEEEEEccCceEEEEecCCCcceEEEE
Confidence 99999999874 899999999999999999998888754
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=8.8e-09 Score=112.87 Aligned_cols=163 Identities=11% Similarity=0.039 Sum_probs=112.6
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCC---CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHN---GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~d---g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
.+..+...+.+.+|+|||+.|+..+.+ ..|.+||+.+++.. .+....+.+...+|+|+|..++...
T Consensus 193 ~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~-~l~~~~g~~~~~~~SpDG~~la~~~---------- 261 (430)
T PRK00178 193 TLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRRE-QITNFEGLNGAPAWSPDGSKLAFVL---------- 261 (430)
T ss_pred EEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEE-EccCCCCCcCCeEECCCCCEEEEEE----------
Confidence 455667788999999999998876543 36889999887542 2323334556789999999887543
Q ss_pred eeecccCCcceeeEEEeeCC--CeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeC-C--CeEEEEECCCCee
Q psy9327 81 ILESRNEPCLFRIKSVLGDD--YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD-D--QTIRIWYWQSRNC 155 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~D--g~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~-D--g~I~vWd~~~~~~ 155 (641)
+.+ ..|.+||+.+++.. .+..+........|+|++..++..++ + ..|+++|+.+++.
T Consensus 262 -----------------~~~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~ 323 (430)
T PRK00178 262 -----------------SKDGNPEIYVMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRA 323 (430)
T ss_pred -----------------ccCCCceEEEEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCE
Confidence 133 36889999987643 45556666677899999998876654 3 3688888877764
Q ss_pred EEEEccCCCCEEEEEEecCCCEEEEEeCC-C--eEEEEecCCCc
Q psy9327 156 ICVLTGHNHYVMCAQFHPTDDIVVSASLD-Q--TIRVWDISGLR 196 (641)
Q Consensus 156 i~~l~~h~~~V~sl~fsp~g~~lvSgs~D-g--tI~IWD~~~~~ 196 (641)
.. +...........|+|+|+.++..+.+ + .|.+||+.+++
T Consensus 324 ~~-lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~ 366 (430)
T PRK00178 324 ER-VTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGS 366 (430)
T ss_pred EE-eecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCC
Confidence 32 22222334567899999988876653 3 47777877644
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.9e-10 Score=116.04 Aligned_cols=164 Identities=13% Similarity=0.179 Sum_probs=126.1
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc--ccccCeEEEEEeCCC---CEEEEeceeeEEeee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD--EHEGPVRGICFHNQQ---PIFVSGGKMIVMAYQ 78 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~--~h~~~V~~i~fsp~~---~~l~sgs~~~~~~~~ 78 (641)
.+..|.+.|.+|.|+|||+.|++-+.| ..+|||.++|..+.... +.+.....+.|+.++ .+.+.+..
T Consensus 181 ~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~------- 252 (398)
T KOG0771|consen 181 EEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQ------- 252 (398)
T ss_pred hhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEec-------
Confidence 345789999999999999999999999 89999999996665543 344566778888766 33332221
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCee-----EEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC-----IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR 153 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~-----~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~ 153 (641)
...+.|..||+...+- ..+.......|++++.+++|++++.|+.||.|-|++..+-
T Consensus 253 -------------------~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~l 313 (398)
T KOG0771|consen 253 -------------------FPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSL 313 (398)
T ss_pred -------------------CCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEecee
Confidence 2455666666543221 2222223457999999999999999999999999999888
Q ss_pred eeEEEE-ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 154 NCICVL-TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 154 ~~i~~l-~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
+++... +.|...|+.+.|+|+.+.+++.|.|.+..+..+.-
T Consensus 314 q~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 314 QRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred eeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence 877665 57999999999999999999999999999887754
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.6e-08 Score=110.59 Aligned_cols=137 Identities=9% Similarity=-0.001 Sum_probs=94.5
Q ss_pred CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC
Q psy9327 31 GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ 110 (641)
Q Consensus 31 g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t 110 (641)
..|.+||++.... ..+..+...+.+.+|+|||+.++..+. .+.+..|.+||+.+
T Consensus 179 ~~l~~~d~dg~~~-~~lt~~~~~~~~p~wSPDG~~la~~s~-------------------------~~g~~~i~i~dl~~ 232 (429)
T PRK03629 179 YELRVSDYDGYNQ-FVVHRSPQPLMSPAWSPDGSKLAYVTF-------------------------ESGRSALVIQTLAN 232 (429)
T ss_pred eeEEEEcCCCCCC-EEeecCCCceeeeEEcCCCCEEEEEEe-------------------------cCCCcEEEEEECCC
Confidence 3699999875433 444456778999999999999886541 01346799999998
Q ss_pred CeeEEEEccCCCCeEEEEEccCCCEEEEE-eCCC--eEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCC-Ce
Q psy9327 111 RKCIFTLLGHLDYIRTTFFHHEYPWILSA-SDDQ--TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLD-QT 186 (641)
Q Consensus 111 ~~~~~~~~~h~~~V~~v~fsp~~~~l~sg-s~Dg--~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~D-gt 186 (641)
++... +....+.+...+|+|||+.|+.. +.++ .|++||+++++.. .+..+...+....|+|+|+.|+.++.+ +.
T Consensus 233 G~~~~-l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~-~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~ 310 (429)
T PRK03629 233 GAVRQ-VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QVTDGRSNNTEPTWFPDSQNLAYTSDQAGR 310 (429)
T ss_pred CCeEE-ccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEE-EccCCCCCcCceEECCCCCEEEEEeCCCCC
Confidence 86433 22233344568999999988754 4344 5999999887654 444455567889999999988777654 44
Q ss_pred EEEE--ecCCC
Q psy9327 187 IRVW--DISGL 195 (641)
Q Consensus 187 I~IW--D~~~~ 195 (641)
..+| |+.++
T Consensus 311 ~~Iy~~d~~~g 321 (429)
T PRK03629 311 PQVYKVNINGG 321 (429)
T ss_pred ceEEEEECCCC
Confidence 4555 44443
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.8e-09 Score=122.40 Aligned_cols=210 Identities=14% Similarity=0.135 Sum_probs=144.6
Q ss_pred EECCCCeeEEEEccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEECCC-------CeeEEEEccCCCCEEEEEEecCCCE
Q psy9327 106 WNYKQRKCIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQS-------RNCICVLTGHNHYVMCAQFHPTDDI 177 (641)
Q Consensus 106 WD~~t~~~~~~~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~I~vWd~~~-------~~~i~~l~~h~~~V~sl~fsp~g~~ 177 (641)
|+.+ |..+..+..|...|..++.+++. ++|+|||+||+||+||.+. .++..++..-...+.++.+.+.++.
T Consensus 1034 W~p~-G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~ 1112 (1431)
T KOG1240|consen 1034 WNPR-GILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQ 1112 (1431)
T ss_pred CCcc-ceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCe
Confidence 6654 78888888999999999888765 9999999999999999864 2345556556788999999999999
Q ss_pred EEEEeCCCeEEEEecCCC--ceeeecc-----C-CCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC-Ccceeeec-
Q psy9327 178 VVSASLDQTIRVWDISGL--RKKNVAP-----G-MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK-MEPLCNIH- 247 (641)
Q Consensus 178 lvSgs~DgtI~IWD~~~~--~~~~~~~-----~-~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~-~~~~~~~~- 247 (641)
++.++.||.|++.++.-. +...... . ....+.+|......-.. ..++++..-+.+..||.+ ...+....
T Consensus 1113 ~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S-~~lvy~T~~~~iv~~D~r~~~~~w~lk~ 1191 (1431)
T KOG1240|consen 1113 FAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQS-HVLVYATDLSRIVSWDTRMRHDAWRLKN 1191 (1431)
T ss_pred EEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccc-eeEEEEEeccceEEecchhhhhHHhhhc
Confidence 999999999999998652 1111110 0 11223333222111000 124555667788999933 33333322
Q ss_pred --CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-EeccccceEE-------EEEcC--c-EEEEEe-CCCCeEEEE
Q psy9327 248 --ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDLPIYI-------TKIKG--N-QVYYLD-RECSPHVLR 313 (641)
Q Consensus 248 --~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~p~~~-------~~~~g--~-~v~~~~-~dg~i~v~~ 313 (641)
..+.|++++.||.+.+++.|++.|.+.+|+..-+. |..|..|..+ ....+ . .+.++. ..+.+..|+
T Consensus 1192 ~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn 1271 (1431)
T KOG1240|consen 1192 QLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWN 1271 (1431)
T ss_pred CccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeee
Confidence 37889999999999999999999999999987764 7788887322 11111 2 233333 567888888
Q ss_pred eCCc
Q psy9327 314 IDPT 317 (641)
Q Consensus 314 ~~~~ 317 (641)
+..+
T Consensus 1272 ~~~g 1275 (1431)
T KOG1240|consen 1272 METG 1275 (1431)
T ss_pred cccC
Confidence 8765
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=7.3e-09 Score=113.22 Aligned_cols=134 Identities=9% Similarity=0.010 Sum_probs=93.9
Q ss_pred CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC
Q psy9327 31 GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ 110 (641)
Q Consensus 31 g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t 110 (641)
..|.+||.. |.....+..+...+.+.+|+|||+.++..+.. .....|.+||+.+
T Consensus 176 ~~L~~~D~d-G~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~-------------------------~~~~~I~~~dl~~ 229 (427)
T PRK02889 176 YQLQISDAD-GQNAQSALSSPEPIISPAWSPDGTKLAYVSFE-------------------------SKKPVVYVHDLAT 229 (427)
T ss_pred cEEEEECCC-CCCceEeccCCCCcccceEcCCCCEEEEEEcc-------------------------CCCcEEEEEECCC
Confidence 457777763 44445555678899999999999998877510 1235699999998
Q ss_pred CeeEEEEccCCCCeEEEEEccCCCEEE-EEeCCCeEEEEE--CCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeC-CCe
Q psy9327 111 RKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWY--WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL-DQT 186 (641)
Q Consensus 111 ~~~~~~~~~h~~~V~~v~fsp~~~~l~-sgs~Dg~I~vWd--~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~-Dgt 186 (641)
++... +....+.+.+.+|+|+++.++ +.+.++...+|. ..++. ...+..|........|+|||+.++..+. ++.
T Consensus 230 g~~~~-l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~ 307 (427)
T PRK02889 230 GRRRV-VANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGA 307 (427)
T ss_pred CCEEE-eecCCCCccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCC
Confidence 87543 333445667899999999876 567777766664 44443 4556656666677899999998876664 466
Q ss_pred EEEEec
Q psy9327 187 IRVWDI 192 (641)
Q Consensus 187 I~IWD~ 192 (641)
..+|.+
T Consensus 308 ~~Iy~~ 313 (427)
T PRK02889 308 PQIYRM 313 (427)
T ss_pred cEEEEE
Confidence 666655
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=8.2e-09 Score=113.11 Aligned_cols=138 Identities=14% Similarity=0.003 Sum_probs=98.1
Q ss_pred CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC
Q psy9327 31 GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ 110 (641)
Q Consensus 31 g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t 110 (641)
.+|.+||... .....+..+...+.+.+|+||+..++..+.. ..+..|.+||+.+
T Consensus 184 ~~l~i~D~~g-~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~-------------------------~~~~~l~~~dl~~ 237 (433)
T PRK04922 184 YALQVADSDG-YNPQTILRSAEPILSPAWSPDGKKLAYVSFE-------------------------RGRSAIYVQDLAT 237 (433)
T ss_pred EEEEEECCCC-CCceEeecCCCccccccCCCCCCEEEEEecC-------------------------CCCcEEEEEECCC
Confidence 4699999864 3445566677889999999999998887510 1245799999988
Q ss_pred CeeEEEEccCCCCeEEEEEccCCCEEE-EEeCCC--eEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeC-CCe
Q psy9327 111 RKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQ--TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL-DQT 186 (641)
Q Consensus 111 ~~~~~~~~~h~~~V~~v~fsp~~~~l~-sgs~Dg--~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~-Dgt 186 (641)
++... +..+.+...+.+|+|+|+.++ +.+.++ .|++||+.+++. ..+..+.......+|+|||+.++.++. +|.
T Consensus 238 g~~~~-l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~ 315 (433)
T PRK04922 238 GQREL-VASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQL-TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGR 315 (433)
T ss_pred CCEEE-eccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCC
Confidence 86533 334455566789999999775 455555 699999988764 455556666678899999998887764 444
Q ss_pred --EEEEecCCCc
Q psy9327 187 --IRVWDISGLR 196 (641)
Q Consensus 187 --I~IWD~~~~~ 196 (641)
|.++|+.+++
T Consensus 316 ~~iy~~dl~~g~ 327 (433)
T PRK04922 316 PQIYRVAASGGS 327 (433)
T ss_pred ceEEEEECCCCC
Confidence 5555655543
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.5e-08 Score=111.34 Aligned_cols=159 Identities=13% Similarity=0.027 Sum_probs=105.0
Q ss_pred cCCCCeEEEEEccCCCeEEEEeC-CC--cEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLH-NG--VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~-dg--~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
.+...+.+..|||||+.|+..+. ++ .|.+||+.+++.. .+....+.....+|+|||..|+...
T Consensus 215 ~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~-~lt~~~g~~~~~~wSPDG~~La~~~------------- 280 (448)
T PRK04792 215 RSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVRE-KVTSFPGINGAPRFSPDGKKLALVL------------- 280 (448)
T ss_pred cCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeE-EecCCCCCcCCeeECCCCCEEEEEE-------------
Confidence 34556788999999998887654 33 5888898877542 2222233445689999999887654
Q ss_pred cccCCcceeeEEEeeCCC--eEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeC-C--CeEEEEECCCCeeEEE
Q psy9327 84 SRNEPCLFRIKSVLGDDY--KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD-D--QTIRIWYWQSRNCICV 158 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg--~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~-D--g~I~vWd~~~~~~i~~ 158 (641)
+.++ .|.+||+.+++. ..+..+.......+|+|++++++..++ + ..|+++|..+++...
T Consensus 281 --------------~~~g~~~Iy~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~- 344 (448)
T PRK04792 281 --------------SKDGQPEIYVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSR- 344 (448)
T ss_pred --------------eCCCCeEEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-
Confidence 1455 488889887764 345556566678899999998876654 3 357777887776432
Q ss_pred EccCCCCEEEEEEecCCCEEEEEeC-CCe--EEEEecCCC
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSASL-DQT--IRVWDISGL 195 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs~-Dgt--I~IWD~~~~ 195 (641)
+..+.......+|+|+|++++..+. ++. |.++|+.++
T Consensus 345 Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g 384 (448)
T PRK04792 345 LTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETG 384 (448)
T ss_pred EecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCC
Confidence 2222333456789999998876655 343 444565554
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.6e-09 Score=121.01 Aligned_cols=191 Identities=17% Similarity=0.237 Sum_probs=137.0
Q ss_pred EEEccCCCeEEEEeCCCcEEEEECccCccccccc-ccccCeEEEEEe-CCCCEEEEeceeeEEeeeceeeecccCCccee
Q psy9327 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD-EHEGPVRGICFH-NQQPIFVSGGKMIVMAYQGCILESRNEPCLFR 92 (641)
Q Consensus 15 l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~-~h~~~V~~i~fs-p~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~ 92 (641)
++|......|+++|.-..|+|||....+.+..+. +.+..|+++.-. +.|+.+++|-
T Consensus 1171 ~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGf---------------------- 1228 (1387)
T KOG1517|consen 1171 VDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGF---------------------- 1228 (1387)
T ss_pred eehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEee----------------------
Confidence 4566655567777778999999998776665553 345567776654 3467888887
Q ss_pred eEEEeeCCCeEEEEECCCCe---eEEEEccCCCC--eEEEEEccCCC-EEEEEeCCCeEEEEECCCCeeE--EEEccCC-
Q psy9327 93 IKSVLGDDYKIKVWNYKQRK---CIFTLLGHLDY--IRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCI--CVLTGHN- 163 (641)
Q Consensus 93 ~~~~~s~Dg~I~vWD~~t~~---~~~~~~~h~~~--V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~~i--~~l~~h~- 163 (641)
.||.|++||.+... .+...+.|++. |..+.+.+.|- .++||+.||.|++||++..... .+...|-
T Consensus 1229 ------aDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~ 1302 (1387)
T KOG1517|consen 1229 ------ADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWE 1302 (1387)
T ss_pred ------cCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccc
Confidence 99999999988753 57788889987 99999998665 5999999999999999874222 2223333
Q ss_pred -C-CEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeec--cCC-C---ceeeecccCCCceeeeeeeeeeCCCeeEEE
Q psy9327 164 -H-YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA--PGM-G---KLVLSMKSKHPIWKYCKPVKYCNPKHTLHI 235 (641)
Q Consensus 164 -~-~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~--~~~-~---~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i 235 (641)
+ ..+++..|+..+.+++|+. +.|+|||+.+.+..... +++ + ..+.| -.+||.+.. ++.|..|..|.+
T Consensus 1303 yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~sc-L~FHP~~~l---lAaG~~Ds~V~i 1377 (1387)
T KOG1517|consen 1303 YGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQLNIIKYNPGFMGQRIGSVSC-LAFHPHRLL---LAAGSADSTVSI 1377 (1387)
T ss_pred cCccceeeeeccCCCeeeecCc-ceEEEEecChhhhcccccCcccccCcCCCcce-eeecchhHh---hhhccCCceEEE
Confidence 3 4899999999999999999 99999999765432221 211 1 11222 356665543 566778888888
Q ss_pred ecC
Q psy9327 236 CNR 238 (641)
Q Consensus 236 ~d~ 238 (641)
|..
T Consensus 1378 Ys~ 1380 (1387)
T KOG1517|consen 1378 YSC 1380 (1387)
T ss_pred eec
Confidence 873
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.8e-10 Score=130.63 Aligned_cols=194 Identities=14% Similarity=0.241 Sum_probs=158.5
Q ss_pred ccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccc-cccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDE-HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~-h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
..|-..|.++.=||..++.++|+.||.|++|.+..++.+..++. -...|+.+.|+.+|..+..+.
T Consensus 2205 k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d-------------- 2270 (2439)
T KOG1064|consen 2205 KHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVD-------------- 2270 (2439)
T ss_pred ecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeec--------------
Confidence 34557789999999999999999999999999999988877753 338899999999999999988
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEe---CCCeEEEEECCC---CeeEEE
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS---DDQTIRIWYWQS---RNCICV 158 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs---~Dg~I~vWd~~~---~~~i~~ 158 (641)
.||.+.+|... .++....+.|+....+..|-. ..+++++ +++.+.+||.-- ..++.
T Consensus 2271 --------------~dg~l~l~q~~-pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~- 2332 (2439)
T KOG1064|consen 2271 --------------GDGDLSLWQAS-PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVH- 2332 (2439)
T ss_pred --------------cCCceeecccC-CcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceee-
Confidence 89999999987 677888889999999999886 5577654 578999999642 23444
Q ss_pred EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~ 238 (641)
..|.+.++++++-|...+++||+.+|.|++||++..+.+++++... ..-.+.++++.|.++||+.
T Consensus 2333 -~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~~~--------------~~~~f~~~ss~g~ikIw~~ 2397 (2439)
T KOG1064|consen 2333 -TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQALD--------------TREYFVTGSSEGNIKIWRL 2397 (2439)
T ss_pred -eecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhhhh--------------hhheeeccCcccceEEEEc
Confidence 7899999999999999999999999999999999988888776421 1112668889999999994
Q ss_pred C-Ccceeee
Q psy9327 239 K-MEPLCNI 246 (641)
Q Consensus 239 ~-~~~~~~~ 246 (641)
+ ...+.++
T Consensus 2398 s~~~ll~~~ 2406 (2439)
T KOG1064|consen 2398 SEFGLLHTF 2406 (2439)
T ss_pred cccchhhcC
Confidence 3 3334333
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=99.07 E-value=6e-10 Score=116.31 Aligned_cols=174 Identities=14% Similarity=0.216 Sum_probs=137.0
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECcc-------CcccccccccccCeEEEEEeCCCCEEEEeceeeE
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRM-------NTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIV 74 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~-------~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~ 74 (641)
+..|.||...|..++--.+.+-+++++.|.+|++|.++. ..+..+++.|..+|..+.|-.+.++++++
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc----- 802 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC----- 802 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec-----
Confidence 457899999999998888888899999999999999863 22455678999999999999998888875
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc--CCCCeEEEEEcc--CCCEEEEE-eCCCeEEEEE
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG--HLDYIRTTFFHH--EYPWILSA-SDDQTIRIWY 149 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~--h~~~V~~v~fsp--~~~~l~sg-s~Dg~I~vWd 149 (641)
||-|++||.--|+++..+.. ..+.+..+..-+ +.+.+..| +...+|+++|
T Consensus 803 -------------------------D~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~D 857 (1034)
T KOG4190|consen 803 -------------------------DGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFD 857 (1034)
T ss_pred -------------------------cCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeee
Confidence 78899999888887764432 223333344334 33444443 6789999999
Q ss_pred CCCCeeEEEEc-----cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCC
Q psy9327 150 WQSRNCICVLT-----GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG 205 (641)
Q Consensus 150 ~~~~~~i~~l~-----~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~ 205 (641)
.+..+....++ +.+..+++++..|.|++++.+-..|+|.+.|.++++.+..+..+.
T Consensus 858 aRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpme 918 (1034)
T KOG4190|consen 858 ARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPME 918 (1034)
T ss_pred cccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCccc
Confidence 99887555543 556779999999999999999999999999999999888776543
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=3.3e-08 Score=107.80 Aligned_cols=169 Identities=15% Similarity=0.096 Sum_probs=104.9
Q ss_pred eccCCCCeEEEEEccCCCe---EEEEeCCC--cEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 5 FETKSARVKGLSFHPKRPW---ILSSLHNG--VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~---Lasg~~dg--~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
+....+.+.+=+|||||+. ++++..+| .|.+.++..++. ..+....+.....+|+|||+.|+..+..
T Consensus 180 lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~-~~lt~~~g~~~~p~wSPDG~~Laf~s~~------- 251 (428)
T PRK01029 180 LTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAG-KKILALQGNQLMPTFSPRKKLLAFISDR------- 251 (428)
T ss_pred cccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCc-eEeecCCCCccceEECCCCCEEEEEECC-------
Confidence 3334455667799999974 23554554 466667776643 3333344555678999999988876410
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCC---eeEEEEccCCCCeEEEEEccCCCEEEEEeC-CCeEEEE--ECCC-
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQR---KCIFTLLGHLDYIRTTFFHHEYPWILSASD-DQTIRIW--YWQS- 152 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~---~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~-Dg~I~vW--d~~~- 152 (641)
.+..+-.+..||+..+ +......++.+.....+|+|||+.|+..++ ++...+| ++..
T Consensus 252 ----------------~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~ 315 (428)
T PRK01029 252 ----------------YGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPE 315 (428)
T ss_pred ----------------CCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECccc
Confidence 0002334555777653 333333333344567899999998876664 5655555 4432
Q ss_pred CeeEEEEccCCCCEEEEEEecCCCEEEEEeCC---CeEEEEecCCCce
Q psy9327 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLD---QTIRVWDISGLRK 197 (641)
Q Consensus 153 ~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~D---gtI~IWD~~~~~~ 197 (641)
+.....+..+...+....|+|||++|+..+.+ ..|.+||+.+++.
T Consensus 316 g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~ 363 (428)
T PRK01029 316 GQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRD 363 (428)
T ss_pred ccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCe
Confidence 23344555556677889999999988876553 3688888877554
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.7e-09 Score=109.98 Aligned_cols=164 Identities=19% Similarity=0.289 Sum_probs=121.1
Q ss_pred eEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc---ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD---EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 12 V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~---~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
.....++|+++++|++..+....++++.......++- .-...-+.+.|..+......+.
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~d------------------ 126 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVAD------------------ 126 (390)
T ss_pred ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEe------------------
Confidence 4455678899999999988888888876544311111 1122334455544444333332
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE-ccCCCCEE
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL-TGHNHYVM 167 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l-~~h~~~V~ 167 (641)
.+++.+.+.+|....+++.. +-||-..+..++|+||+++|+++..|.+|+|-.+..-..+..| -||...|.
T Consensus 127 -------kagD~~~~di~s~~~~~~~~-~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS 198 (390)
T KOG3914|consen 127 -------KAGDVYSFDILSADSGRCEP-ILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVS 198 (390)
T ss_pred -------ecCCceeeeeecccccCcch-hhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhhee
Confidence 11377888899887755443 4579999999999999999999999999999888766666555 48999999
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 168 CAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 168 sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
.++.-++. .|+|||.|+++++||+.+++...++.
T Consensus 199 ~isl~~~~-~LlS~sGD~tlr~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 199 TISLTDNY-LLLSGSGDKTLRLWDITSGKLLDTCD 232 (390)
T ss_pred eeeeccCc-eeeecCCCCcEEEEecccCCcccccc
Confidence 99988654 48999999999999999999887664
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.03 E-value=6.4e-08 Score=105.48 Aligned_cols=138 Identities=12% Similarity=0.037 Sum_probs=95.6
Q ss_pred CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC
Q psy9327 31 GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ 110 (641)
Q Consensus 31 g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t 110 (641)
..|.++|...+ ....+..+...+...+|+|++++++.+.. ......|.+||+.+
T Consensus 170 ~~l~~~d~~g~-~~~~l~~~~~~~~~p~~Spdg~~la~~~~-------------------------~~~~~~i~v~d~~~ 223 (417)
T TIGR02800 170 YELQVADYDGA-NPQTITRSREPILSPAWSPDGQKLAYVSF-------------------------ESGKPEIYVQDLAT 223 (417)
T ss_pred ceEEEEcCCCC-CCEEeecCCCceecccCCCCCCEEEEEEc-------------------------CCCCcEEEEEECCC
Confidence 35888887533 34555567778999999999999988751 01235899999998
Q ss_pred CeeEEEEccCCCCeEEEEEccCCCEEEE-EeCC--CeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeC-CC-
Q psy9327 111 RKCIFTLLGHLDYIRTTFFHHEYPWILS-ASDD--QTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL-DQ- 185 (641)
Q Consensus 111 ~~~~~~~~~h~~~V~~v~fsp~~~~l~s-gs~D--g~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~-Dg- 185 (641)
++... +..+.+.+.+++|+|+++.|+. .+.+ ..|++||+.++.. ..+..+........|+|+|+.|+.++. ++
T Consensus 224 g~~~~-~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~ 301 (417)
T TIGR02800 224 GQREK-VASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQL-TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGS 301 (417)
T ss_pred CCEEE-eecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCE-EECCCCCCCCCCEEECCCCCEEEEEECCCCC
Confidence 86543 3345566778999999987764 4444 3699999987754 344445555667899999998876664 33
Q ss_pred -eEEEEecCCCc
Q psy9327 186 -TIRVWDISGLR 196 (641)
Q Consensus 186 -tI~IWD~~~~~ 196 (641)
.|.+||+.+++
T Consensus 302 ~~iy~~d~~~~~ 313 (417)
T TIGR02800 302 PQIYMMDADGGE 313 (417)
T ss_pred ceEEEEECCCCC
Confidence 46666665543
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=99.03 E-value=3.2e-10 Score=123.98 Aligned_cols=253 Identities=12% Similarity=0.146 Sum_probs=168.5
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceee--EEeeec-
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMI--VMAYQG- 79 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~--~~~~~~- 79 (641)
++|..|.+..+|++|+-+.+.|+.|+..|.|+++++.+|........|..+|+.+.=+.+|..+++++... ....|+
T Consensus 1095 ~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~ 1174 (1516)
T KOG1832|consen 1095 RSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDA 1174 (1516)
T ss_pred hhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhcc
Confidence 56788999999999999999999999999999999999999999999999999999999999888776211 000111
Q ss_pred ee----------eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE-ccC---CCCeEEEEEccCCCEEEEEeCCCeE
Q psy9327 80 CI----------LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL-LGH---LDYIRTTFFHHEYPWILSASDDQTI 145 (641)
Q Consensus 80 ~~----------~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~-~~h---~~~V~~v~fsp~~~~l~sgs~Dg~I 145 (641)
.. .......+..++-+.|.......+||++++.++.++ .+- .-.-.+..|+|+..+++- ||
T Consensus 1175 ~s~~~~~Hsf~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIln---dG-- 1249 (1516)
T KOG1832|consen 1175 SSTGGPRHSFDEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLILN---DG-- 1249 (1516)
T ss_pred ccccCccccccccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEee---Cc--
Confidence 00 111112223344445556667899999999887773 321 112367889999988764 34
Q ss_pred EEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeee--
Q psy9327 146 RIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKP-- 223 (641)
Q Consensus 146 ~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~-- 223 (641)
.+||++..+.++.|...+.++.. .|||.|..++..|. |||+++.+..+..|..++.-.+......+.-....
T Consensus 1250 vLWDvR~~~aIh~FD~ft~~~~G-~FHP~g~eVIINSE-----IwD~RTF~lLh~VP~Ldqc~VtFNstG~VmYa~~~~~ 1323 (1516)
T KOG1832|consen 1250 VLWDVRIPEAIHRFDQFTDYGGG-GFHPSGNEVIINSE-----IWDMRTFKLLHSVPSLDQCAVTFNSTGDVMYAMLNIE 1323 (1516)
T ss_pred eeeeeccHHHHhhhhhheecccc-cccCCCceEEeech-----hhhhHHHHHHhcCccccceEEEeccCccchhhhhhhh
Confidence 48999999989888766655543 59999999988775 89999999888887654443322211111000000
Q ss_pred -----eeeeC----CCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEE
Q psy9327 224 -----VKYCN----PKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYT 266 (641)
Q Consensus 224 -----l~s~~----~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t 266 (641)
+..-. -....+.+| .....+.++....++..++-+|...++..
T Consensus 1324 d~~sdvh~~r~k~p~fSSFRTf~a~dYs~iaTi~v~R~~~Dlct~~~D~~l~v 1376 (1516)
T KOG1832|consen 1324 DVMSDVHTRRVKHPLFSSFRTFDAIDYSDIATIPVDRCLLDLCTEPTDSFLGV 1376 (1516)
T ss_pred hhhhhhcccccccchhhhhccccccccccceeeecccchhhhhcCCccceEEE
Confidence 00000 011223333 34455666666677777777776666554
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.00 E-value=2e-08 Score=98.29 Aligned_cols=157 Identities=15% Similarity=0.121 Sum_probs=117.1
Q ss_pred CCeEEEEEcc---CCC-eEEEEeCCCcEEEEECccCcccccccc---cc---cCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 10 ARVKGLSFHP---KRP-WILSSLHNGVIQLWDYRMNTLLEKFDE---HE---GPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 10 ~~V~~l~fsp---dg~-~Lasg~~dg~I~iWD~~~~~~l~~~~~---h~---~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
+.+..+.|.. +|. .++-+..+|.|+++..........+++ .. ....++.|++.+..++++.
T Consensus 70 s~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~--------- 140 (339)
T KOG0280|consen 70 STEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSD--------- 140 (339)
T ss_pred cccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEc---------
Confidence 4455566653 444 456666788899887654333222322 11 1245788999988888887
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeE--EEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECC-CCee
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCI--FTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQ-SRNC 155 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~--~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~-~~~~ 155 (641)
.+|.+.+-+....... +++++|+-+...+.|+...+ ++.+||+|+.+..||++ .+++
T Consensus 141 -------------------s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~ 201 (339)
T KOG0280|consen 141 -------------------SRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTF 201 (339)
T ss_pred -------------------CCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcce
Confidence 7888886666555443 47899999999999998666 67899999999999999 4555
Q ss_pred EEE-EccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEecCC
Q psy9327 156 ICV-LTGHNHYVMCAQFHP-TDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 156 i~~-l~~h~~~V~sl~fsp-~g~~lvSgs~DgtI~IWD~~~ 194 (641)
+.. -+-|...|.++.-+| .+..|++|+.|-.|++||.++
T Consensus 202 i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRn 242 (339)
T KOG0280|consen 202 IWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRN 242 (339)
T ss_pred eeecceeeecceEEEecCCCCCceEEEeccccceeeeehhc
Confidence 554 457889999999887 578999999999999999996
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.7e-08 Score=100.90 Aligned_cols=215 Identities=15% Similarity=0.283 Sum_probs=151.5
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc----ccccccccccCeEEEEEeCCCCEEEE-eceeeEEeeeceeee
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT----LLEKFDEHEGPVRGICFHNQQPIFVS-GGKMIVMAYQGCILE 83 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~----~l~~~~~h~~~V~~i~fsp~~~~l~s-gs~~~~~~~~~~~~~ 83 (641)
+.+|.+++.. | .+|++|-.+|.+++|....+. .+..+.. ..++..+.-++..+.+++ ||
T Consensus 105 ~~~I~gl~~~-d-g~Litc~~sG~l~~~~~k~~d~hss~l~~la~-g~g~~~~r~~~~~p~Iva~GG------------- 168 (412)
T KOG3881|consen 105 TKSIKGLKLA-D-GTLITCVSSGNLQVRHDKSGDLHSSKLIKLAT-GPGLYDVRQTDTDPYIVATGG------------- 168 (412)
T ss_pred cccccchhhc-C-CEEEEEecCCcEEEEeccCCccccccceeeec-CCceeeeccCCCCCceEecCc-------------
Confidence 3445555443 2 368888999999999987543 2222222 245555666666555554 44
Q ss_pred cccCCcceeeEEEeeCC--CeEEEEECCCCeeEEEEccCC-C--------CeEEEEEccC--CCEEEEEeCCCeEEEEEC
Q psy9327 84 SRNEPCLFRIKSVLGDD--YKIKVWNYKQRKCIFTLLGHL-D--------YIRTTFFHHE--YPWILSASDDQTIRIWYW 150 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~D--g~I~vWD~~t~~~~~~~~~h~-~--------~V~~v~fsp~--~~~l~sgs~Dg~I~vWd~ 150 (641)
.. ..+.+||+++.+.+++-+.-. + .++++.|-+. ...|++++.-+.+++||.
T Consensus 169 ---------------ke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt 233 (412)
T KOG3881|consen 169 ---------------KENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDT 233 (412)
T ss_pred ---------------hhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecC
Confidence 66 789999999886666544211 1 3567889887 779999999999999999
Q ss_pred CC-CeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeee-ccCCCceeeec--ccCCCceeeeeeeee
Q psy9327 151 QS-RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNV-APGMGKLVLSM--KSKHPIWKYCKPVKY 226 (641)
Q Consensus 151 ~~-~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~-~~~~~~~v~s~--~~~~~v~~~~~~l~s 226 (641)
+. ++++..+.--..+++++...|+++.|++|..-+.+..||+++++.... +.+....+.++ -..||+ +++
T Consensus 234 ~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~------las 307 (412)
T KOG3881|consen 234 RHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPV------LAS 307 (412)
T ss_pred cccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCce------EEe
Confidence 86 457888877788999999999999999999999999999999887765 55544333332 223344 778
Q ss_pred eCCCeeEEEecC-CCcceeeecCCcceEEEEEcCC
Q psy9327 227 CNPKHTLHICNR-KMEPLCNIHENTRVKSGAWDES 260 (641)
Q Consensus 227 ~~~d~~I~i~d~-~~~~~~~~~~~~~I~sla~~p~ 260 (641)
|+-|..++|+|. +...+..+.-...++++-+.++
T Consensus 308 ~GLDRyvRIhD~ktrkll~kvYvKs~lt~il~~~~ 342 (412)
T KOG3881|consen 308 CGLDRYVRIHDIKTRKLLHKVYVKSRLTFILLRDD 342 (412)
T ss_pred eccceeEEEeecccchhhhhhhhhccccEEEecCC
Confidence 889999999994 3344444444566666666554
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.7e-08 Score=100.69 Aligned_cols=206 Identities=17% Similarity=0.331 Sum_probs=152.5
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECc-cCccccccc-ccccCeEEEEEeCCCCEEEEeceeeEEeee
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYR-MNTLLEKFD-EHEGPVRGICFHNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~-~~~~l~~~~-~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~ 78 (641)
+++.++||.+.|+....-|..+-+++.+.|.++++|--+ .++--..+. .-..++++++++++...|++|-
T Consensus 16 ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~-------- 87 (404)
T KOG1409|consen 16 LLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQ-------- 87 (404)
T ss_pred hhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEE--------
Confidence 467899999999999999998999999999999999643 344333221 2456889999999999999997
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEEC----CCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC---
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNY----KQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ--- 151 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~----~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~--- 151 (641)
..|++.-+.+ +..........|...|..+-|+-.-.++++.+.|..+.---.+
T Consensus 88 --------------------~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~ 147 (404)
T KOG1409|consen 88 --------------------DNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGN 147 (404)
T ss_pred --------------------ecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCC
Confidence 7777777754 3445566677788899888888888888888877654221111
Q ss_pred --------------------------------------CCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecC
Q psy9327 152 --------------------------------------SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193 (641)
Q Consensus 152 --------------------------------------~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~ 193 (641)
.-..+.++.+|.+.+++++|.|....+.||..|..+.+||+-
T Consensus 148 ~lg~Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdig 227 (404)
T KOG1409|consen 148 RLGGYNFETPASALQFDALYAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIG 227 (404)
T ss_pred cccceEeeccCCCCceeeEEEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEecc
Confidence 113566788999999999999999999999999999999998
Q ss_pred CCceee-eccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC
Q psy9327 194 GLRKKN-VAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 194 ~~~~~~-~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~ 238 (641)
.++.+. .+.+|++.|..+..... .-.+.+++.|+.|.+||-
T Consensus 228 g~~g~~~el~gh~~kV~~l~~~~~----t~~l~S~~edg~i~~w~m 269 (404)
T KOG1409|consen 228 GRKGTAYELQGHNDKVQALSYAQH----TRQLISCGEDGGIVVWNM 269 (404)
T ss_pred CCcceeeeeccchhhhhhhhhhhh----heeeeeccCCCeEEEEec
Confidence 766544 34455555443221111 112567889999999983
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.2e-06 Score=93.12 Aligned_cols=242 Identities=11% Similarity=0.138 Sum_probs=152.9
Q ss_pred CCeEEEEEccCCCeEEEEeC----CCcEEEEECccC--c--ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 10 ARVKGLSFHPKRPWILSSLH----NGVIQLWDYRMN--T--LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~----dg~I~iWD~~~~--~--~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.....++++|++++|.+... +|.|..|++... + .+.+..........++++|++.+++++..
T Consensus 37 ~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany---------- 106 (345)
T PF10282_consen 37 ENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANY---------- 106 (345)
T ss_dssp SSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEET----------
T ss_pred CCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEc----------
Confidence 34567889999999998876 578999988753 2 33333333455567999999999999873
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCC-CeeEEE---Ec----------cCCCCeEEEEEccCCCEEEEEeC-CCeEE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQ-RKCIFT---LL----------GHLDYIRTTFFHHEYPWILSASD-DQTIR 146 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t-~~~~~~---~~----------~h~~~V~~v~fsp~~~~l~sgs~-Dg~I~ 146 (641)
.+|.|.++++.. |..... +. .......++.|+|+++++++... ...|.
T Consensus 107 -----------------~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~ 169 (345)
T PF10282_consen 107 -----------------GGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVY 169 (345)
T ss_dssp -----------------TTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEE
T ss_pred -----------------cCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEE
Confidence 699999999987 443322 21 11234678999999998777543 45899
Q ss_pred EEECCCCe--e--EEEEc-cCCCCEEEEEEecCCCEEEEE-eCCCeEEEEecC--CCcee--eeccCCCceeeecccCCC
Q psy9327 147 IWYWQSRN--C--ICVLT-GHNHYVMCAQFHPTDDIVVSA-SLDQTIRVWDIS--GLRKK--NVAPGMGKLVLSMKSKHP 216 (641)
Q Consensus 147 vWd~~~~~--~--i~~l~-~h~~~V~sl~fsp~g~~lvSg-s~DgtI~IWD~~--~~~~~--~~~~~~~~~v~s~~~~~~ 216 (641)
+|++.... . ...+. ......+.+.|+|+++++... -.+++|.++++. ++... ...... .
T Consensus 170 ~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~-------~---- 238 (345)
T PF10282_consen 170 VYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTL-------P---- 238 (345)
T ss_dssp EEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESC-------E----
T ss_pred EEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeec-------c----
Confidence 99987654 2 12222 345668999999999877555 458899999987 32111 111000 0
Q ss_pred ceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEec-CCeEEEEEc--CCCCeEecc-------
Q psy9327 217 IWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTS-NHIKYAIVN--GDHGIIRTL------- 286 (641)
Q Consensus 217 v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s-~~~k~~l~~--~~~g~I~~~------- 286 (641)
. ..........++++|+|++|+.+. .+..+.++. .++|.+..+
T Consensus 239 ------------~---------------~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G 291 (345)
T PF10282_consen 239 ------------E---------------GFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGG 291 (345)
T ss_dssp ------------T---------------TSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESS
T ss_pred ------------c---------------cccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCC
Confidence 0 001123566789999999999876 444555555 455655433
Q ss_pred ccceEE-EEEcCcEEEEEe-CCCCeEEEEeCC
Q psy9327 287 DLPIYI-TKIKGNQVYYLD-RECSPHVLRIDP 316 (641)
Q Consensus 287 d~p~~~-~~~~g~~v~~~~-~dg~i~v~~~~~ 316 (641)
+.|-.+ ...+|+.++..+ .++.+.++++|.
T Consensus 292 ~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~ 323 (345)
T PF10282_consen 292 KFPRHFAFSPDGRYLYVANQDSNTVSVFDIDP 323 (345)
T ss_dssp SSEEEEEE-TTSSEEEEEETTTTEEEEEEEET
T ss_pred CCccEEEEeCCCCEEEEEecCCCeEEEEEEeC
Confidence 223222 335678787766 557888888874
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=98.94 E-value=4.8e-08 Score=105.23 Aligned_cols=224 Identities=9% Similarity=0.197 Sum_probs=156.3
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCc---------------ccccccccccCeEEEEEeCCCCEEEEeceeeE
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT---------------LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIV 74 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~---------------~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~ 74 (641)
....|++|+....++|+||.||.+++-.+.+.. +-.++++|++.|.-+.|+.+...+-++.
T Consensus 15 vkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSD---- 90 (1189)
T KOG2041|consen 15 VKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSD---- 90 (1189)
T ss_pred ceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccC----
Confidence 457899999999999999999999999875421 2345789999999999999998988887
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc--cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCC
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL--GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~--~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~ 152 (641)
.+|.|.||-+-.|.....+. ...+.|.+++|..+|..++....||.|.|=.+..
T Consensus 91 ------------------------t~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdG 146 (1189)
T KOG2041|consen 91 ------------------------TSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDG 146 (1189)
T ss_pred ------------------------CCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeecc
Confidence 99999999988776544332 2456799999999999999999999998877664
Q ss_pred CeeE-EEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCcee-----eeccC------CCceeeecc--------
Q psy9327 153 RNCI-CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK-----NVAPG------MGKLVLSMK-------- 212 (641)
Q Consensus 153 ~~~i-~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~-----~~~~~------~~~~v~s~~-------- 212 (641)
.+.. ..+++. -...+.|++|...++-+-..|.+.++|.+..-.+ ....+ .++.+.+..
T Consensus 147 NRIwgKeLkg~--~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~ 224 (1189)
T KOG2041|consen 147 NRIWGKELKGQ--LLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQP 224 (1189)
T ss_pred ceecchhcchh--eccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCcccc
Confidence 4422 122221 2346889999998888888999999998653111 11111 011111111
Q ss_pred --cCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecC
Q psy9327 213 --SKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSN 269 (641)
Q Consensus 213 --~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~ 269 (641)
...|. ++.|-..|.+.+.. .+...-..+..+-.+..+.|+++|..|+.+++
T Consensus 225 v~pdrP~------lavcy~nGr~QiMR~eND~~Pvv~dtgm~~vgakWnh~G~vLAvcG~ 278 (1189)
T KOG2041|consen 225 VPPDRPR------LAVCYANGRMQIMRSENDPEPVVVDTGMKIVGAKWNHNGAVLAVCGN 278 (1189)
T ss_pred CCCCCCE------EEEEEcCceehhhhhcCCCCCeEEecccEeecceecCCCcEEEEccC
Confidence 12222 33344556655554 22222334444677888999999999998874
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.5e-07 Score=98.63 Aligned_cols=191 Identities=14% Similarity=0.158 Sum_probs=129.8
Q ss_pred CeE-EEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCC
Q psy9327 22 PWI-LSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDD 100 (641)
Q Consensus 22 ~~L-asg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~D 100 (641)
+++ ++-..+|.|.+.|..+.+.+.++......-..+.|+||++++.+++ .|
T Consensus 6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~----------------------------rd 57 (369)
T PF02239_consen 6 NLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVAN----------------------------RD 57 (369)
T ss_dssp GEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEE----------------------------TT
T ss_pred cEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEc----------------------------CC
Confidence 444 4555689999999999999999976555445688999999999987 89
Q ss_pred CeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEe-CCCeEEEEECCCCeeEEEEcc-------CCCCEEEEEEe
Q psy9327 101 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS-DDQTIRIWYWQSRNCICVLTG-------HNHYVMCAQFH 172 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs-~Dg~I~vWd~~~~~~i~~l~~-------h~~~V~sl~fs 172 (641)
|.|.++|+.+++.+.++.... ...+++++++|+++++++ .++.+.++|.++.+.+..+.. ....+..+..+
T Consensus 58 g~vsviD~~~~~~v~~i~~G~-~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s 136 (369)
T PF02239_consen 58 GTVSVIDLATGKVVATIKVGG-NPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVAS 136 (369)
T ss_dssp SEEEEEETTSSSEEEEEE-SS-EEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-
T ss_pred CeEEEEECCcccEEEEEecCC-CcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEec
Confidence 999999999999999987544 457899999999888665 689999999999998887753 23467788888
Q ss_pred cCCCEEEEEeC-CCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcc
Q psy9327 173 PTDDIVVSASL-DQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTR 251 (641)
Q Consensus 173 p~g~~lvSgs~-DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~ 251 (641)
|..+.++.+-. .+.|-+-|....+... ...+.....
T Consensus 137 ~~~~~fVv~lkd~~~I~vVdy~d~~~~~-------------------------------------------~~~i~~g~~ 173 (369)
T PF02239_consen 137 PGRPEFVVNLKDTGEIWVVDYSDPKNLK-------------------------------------------VTTIKVGRF 173 (369)
T ss_dssp SSSSEEEEEETTTTEEEEEETTTSSCEE-------------------------------------------EEEEE--TT
T ss_pred CCCCEEEEEEccCCeEEEEEeccccccc-------------------------------------------eeeeccccc
Confidence 88875554444 4777666765532111 111222445
Q ss_pred eEEEEEcCCccEEEEe-cCCeEEEEEcCCCCeEe
Q psy9327 252 VKSGAWDESGVFIYTT-SNHIKYAIVNGDHGIIR 284 (641)
Q Consensus 252 I~sla~~p~g~~L~t~-s~~~k~~l~~~~~g~I~ 284 (641)
...+.|+|+|++++.+ ....++.+++...+.+.
T Consensus 174 ~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v 207 (369)
T PF02239_consen 174 PHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLV 207 (369)
T ss_dssp EEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEE
T ss_pred ccccccCcccceeeecccccceeEEEeeccceEE
Confidence 5668999999987765 35557778887776543
|
... |
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.2e-08 Score=106.48 Aligned_cols=145 Identities=19% Similarity=0.259 Sum_probs=128.0
Q ss_pred CCCeEEEEeCCCcEEEEECccCccccccc--ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEe
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNTLLEKFD--EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVL 97 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~~l~~~~--~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (641)
+-..++-|...|.|.+|+...|+.-.++. .|.++|.++.++.+-..|.+++
T Consensus 69 ~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~--------------------------- 121 (541)
T KOG4547|consen 69 DTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVG--------------------------- 121 (541)
T ss_pred CceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecC---------------------------
Confidence 34478888889999999999998887775 6999999999999999999998
Q ss_pred eCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecC---
Q psy9327 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT--- 174 (641)
Q Consensus 98 s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~--- 174 (641)
.|+.+..|+...++.++.+.+....+.+++.+||+..+++|| +.|++||+++++.+.+|.||.++|++++|--+
T Consensus 122 -ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g 198 (541)
T KOG4547|consen 122 -ADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDG 198 (541)
T ss_pred -CceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccc
Confidence 999999999999999999999999999999999999999997 79999999999999999999999999999876
Q ss_pred --CCEEEE-EeCCCeEEEEecCC
Q psy9327 175 --DDIVVS-ASLDQTIRVWDISG 194 (641)
Q Consensus 175 --g~~lvS-gs~DgtI~IWD~~~ 194 (641)
|.++++ +..+.-+.+|-...
T Consensus 199 ~~G~~vLssa~~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 199 IIGKYVLSSAAAERGITVWVVEK 221 (541)
T ss_pred cccceeeeccccccceeEEEEEc
Confidence 555554 44566677786654
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.3e-08 Score=105.67 Aligned_cols=246 Identities=15% Similarity=0.135 Sum_probs=168.2
Q ss_pred cccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc-cCCC
Q psy9327 44 LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL-GHLD 122 (641)
Q Consensus 44 l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~-~h~~ 122 (641)
..++..|.+.|..+.|...|..+++|+ +|.+|.+||+..++....|. +|..
T Consensus 135 ~~kL~~H~GcVntV~FN~~Gd~l~SgS----------------------------DD~~vv~WdW~~~~~~l~f~SGH~~ 186 (559)
T KOG1334|consen 135 QKKLNKHKGCVNTVHFNQRGDVLASGS----------------------------DDLQVVVWDWVSGSPKLSFESGHCN 186 (559)
T ss_pred hhcccCCCCccceeeecccCceeeccC----------------------------ccceEEeehhhccCccccccccccc
Confidence 455678999999999999999999998 99999999999998887775 5888
Q ss_pred CeEEEEEccC--CCEEEEEeCCCeEEEEECCCC-ee--EEEEccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEecCCCc
Q psy9327 123 YIRTTFFHHE--YPWILSASDDQTIRIWYWQSR-NC--ICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLR 196 (641)
Q Consensus 123 ~V~~v~fsp~--~~~l~sgs~Dg~I~vWd~~~~-~~--i~~l~~h~~~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~~~ 196 (641)
.|.-..|-|. ..-+++++.||.|++=.+... .+ ...+..|.++|..++.-|+. .-+.|++.|+.+.-+|++...
T Consensus 187 NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~ 266 (559)
T KOG1334|consen 187 NVFQAKFIPFSGDRTIVTSSRDGQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDV 266 (559)
T ss_pred chhhhhccCCCCCcCceeccccCceeeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCC
Confidence 8888888883 457999999999998776432 22 24556799999999999975 568999999999999998765
Q ss_pred eeeeccC---CCc-eee-ecccCCCceeeeeeeeeeCCCeeEEEecCCCcc-------eeee-------cCCcceEEEEE
Q psy9327 197 KKNVAPG---MGK-LVL-SMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEP-------LCNI-------HENTRVKSGAW 257 (641)
Q Consensus 197 ~~~~~~~---~~~-~v~-s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~-------~~~~-------~~~~~I~sla~ 257 (641)
....+.. ..+ .|. ...+.+|... ..++.++.+..+++||.+... +..+ .....|++++|
T Consensus 267 pa~~~~cr~~~~~~~v~L~~Ia~~P~nt--~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Y 344 (559)
T KOG1334|consen 267 PAEKFVCREADEKERVGLYTIAVDPRNT--NEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVY 344 (559)
T ss_pred ccceeeeeccCCccceeeeeEecCCCCc--cccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEe
Confidence 4433321 011 000 0001111100 115677788899999933211 1111 12567999999
Q ss_pred cCCccEEEEecCCeEEEEEcCCCCe--------Eeccccc--------------eEEEEEcCcEEEEEeCCCCeEEEEeC
Q psy9327 258 DESGVFIYTTSNHIKYAIVNGDHGI--------IRTLDLP--------------IYITKIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 258 ~p~g~~L~t~s~~~k~~l~~~~~g~--------I~~~d~p--------------~~~~~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
+.++.-|.+.-++..+++++.+-+. ++.--.+ +..+......|++++.-|.|++|+-.
T Consensus 345 sh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~ 424 (559)
T KOG1334|consen 345 SHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKK 424 (559)
T ss_pred cCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecc
Confidence 9665555555666666666543221 1111111 22234556788999999999999888
Q ss_pred Ccch
Q psy9327 316 PTEF 319 (641)
Q Consensus 316 ~~~~ 319 (641)
+++.
T Consensus 425 t~ei 428 (559)
T KOG1334|consen 425 TGEI 428 (559)
T ss_pred hhHH
Confidence 7443
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.4e-08 Score=107.12 Aligned_cols=162 Identities=17% Similarity=0.297 Sum_probs=131.7
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc------cccc-----CeEEEEEeCCCCEEEEec
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD------EHEG-----PVRGICFHNQQPIFVSGG 70 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~------~h~~-----~V~~i~fsp~~~~l~sgs 70 (641)
|.-|+...+.++++..++-..+|++|+.+|.|..||.++...+.++. .|.+ .|+++.|+.+|-.+++|.
T Consensus 168 L~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGt 247 (703)
T KOG2321|consen 168 LNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGT 247 (703)
T ss_pred ccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeec
Confidence 55677788999999999999999999999999999998876665553 2333 499999999999999997
Q ss_pred eeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCC--CCeEEEEEccC--CCEEEEEeCCCeEE
Q psy9327 71 KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL--DYIRTTFFHHE--YPWILSASDDQTIR 146 (641)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~--~~V~~v~fsp~--~~~l~sgs~Dg~I~ 146 (641)
.+|.|.+||+++.+++..-. |. -+|..+.|.+. ++.++| .+...++
T Consensus 248 ----------------------------s~G~v~iyDLRa~~pl~~kd-h~~e~pi~~l~~~~~~~q~~v~S-~Dk~~~k 297 (703)
T KOG2321|consen 248 ----------------------------STGSVLIYDLRASKPLLVKD-HGYELPIKKLDWQDTDQQNKVVS-MDKRILK 297 (703)
T ss_pred ----------------------------cCCcEEEEEcccCCceeecc-cCCccceeeecccccCCCceEEe-cchHHhh
Confidence 99999999999999877543 54 47888999775 333444 4567899
Q ss_pred EEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 147 IWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 147 vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
|||-.+++....+. ....+..+|+-|++.++++|-.+..+..|=+..
T Consensus 298 iWd~~~Gk~~asiE-pt~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~ 344 (703)
T KOG2321|consen 298 IWDECTGKPMASIE-PTSDLNDFCFVPGSGMFFTANESSKMHTYYIPS 344 (703)
T ss_pred hcccccCCceeecc-ccCCcCceeeecCCceEEEecCCCcceeEEccc
Confidence 99999999888776 445599999999999999999988777665443
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=4.7e-07 Score=99.20 Aligned_cols=137 Identities=13% Similarity=0.019 Sum_probs=95.0
Q ss_pred cEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC
Q psy9327 32 VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR 111 (641)
Q Consensus 32 ~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~ 111 (641)
.|.++|.+.+. ...+..+..++....|+|||+.|+..+.. .....|.+||+.++
T Consensus 180 ~l~~~d~~g~~-~~~l~~~~~~~~~p~wSpDG~~la~~s~~-------------------------~~~~~l~~~~l~~g 233 (430)
T PRK00178 180 TLQRSDYDGAR-AVTLLQSREPILSPRWSPDGKRIAYVSFE-------------------------QKRPRIFVQNLDTG 233 (430)
T ss_pred EEEEECCCCCC-ceEEecCCCceeeeeECCCCCEEEEEEcC-------------------------CCCCEEEEEECCCC
Confidence 47788876543 34455677889999999999998876510 02347999999988
Q ss_pred eeEEEEccCCCCeEEEEEccCCCEEE-EEeCCC--eEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeC-CC--
Q psy9327 112 KCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQ--TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL-DQ-- 185 (641)
Q Consensus 112 ~~~~~~~~h~~~V~~v~fsp~~~~l~-sgs~Dg--~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~-Dg-- 185 (641)
+... +....+.+...+|+|+|+.++ +.+.++ .|++||..++.. ..+..+........|+|+|+.++..+. ++
T Consensus 234 ~~~~-l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~ 311 (430)
T PRK00178 234 RREQ-ITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQL-SRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKP 311 (430)
T ss_pred CEEE-ccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCe-EEcccCCCCcCCeEECCCCCEEEEEECCCCCc
Confidence 6533 333444556789999999876 444444 688899988764 345556666677899999998776554 33
Q ss_pred eEEEEecCCCc
Q psy9327 186 TIRVWDISGLR 196 (641)
Q Consensus 186 tI~IWD~~~~~ 196 (641)
.|.++|+.+++
T Consensus 312 ~iy~~d~~~g~ 322 (430)
T PRK00178 312 QIYKVNVNGGR 322 (430)
T ss_pred eEEEEECCCCC
Confidence 46666766554
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.4e-06 Score=85.54 Aligned_cols=250 Identities=11% Similarity=0.138 Sum_probs=161.9
Q ss_pred cCCCCeEEEEEccCCCeEEEEeC---CCcEEEEECcc--Ccc--cccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLH---NGVIQLWDYRM--NTL--LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~---dg~I~iWD~~~--~~~--l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
.+.+..+-|+|+|+++.|.++-. +|.|-.|.++. |++ +........+-..+++++++++++++..
T Consensus 37 ~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY-------- 108 (346)
T COG2706 37 AELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANY-------- 108 (346)
T ss_pred cccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEc--------
Confidence 34567888999999999988865 47788887764 432 3333333344488999999999999984
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCC-CeeEE--EEccCCCC----------eEEEEEccCCCEEEEEeC-CCeE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQ-RKCIF--TLLGHLDY----------IRTTFFHHEYPWILSASD-DQTI 145 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t-~~~~~--~~~~h~~~----------V~~v~fsp~~~~l~sgs~-Dg~I 145 (641)
..|.|.++-++. |.+.. ....|.+. +....|.|+++++++..- -..|
T Consensus 109 -------------------~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri 169 (346)
T COG2706 109 -------------------HSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRI 169 (346)
T ss_pred -------------------cCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceE
Confidence 778999998865 43221 12236555 888999999998888764 3478
Q ss_pred EEEECCCCeeEEEE---ccCCCCEEEEEEecCCCEEEEEe-CCCeEEEEecCCC-ceeeeccCCCceeeecccCCCceee
Q psy9327 146 RIWYWQSRNCICVL---TGHNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDISGL-RKKNVAPGMGKLVLSMKSKHPIWKY 220 (641)
Q Consensus 146 ~vWd~~~~~~i~~l---~~h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~~-~~~~~~~~~~~~v~s~~~~~~v~~~ 220 (641)
.+|++..+.....- -......+.+.|||++++....+ .+++|-+|..... .....++. +.++
T Consensus 170 ~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~----i~tl--------- 236 (346)
T COG2706 170 FLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQT----IDTL--------- 236 (346)
T ss_pred EEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeee----eccC---------
Confidence 99999877532211 13445678999999999877655 5999999999873 22222211 0000
Q ss_pred eeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEecC-CeEEEEEc--CCCCeEecccc-------c-
Q psy9327 221 CKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSN-HIKYAIVN--GDHGIIRTLDL-------P- 289 (641)
Q Consensus 221 ~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~-~~k~~l~~--~~~g~I~~~d~-------p- 289 (641)
-..+........+..+++|++|+++.. +..+.++. ..+|.+..... |
T Consensus 237 ----------------------P~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR 294 (346)
T COG2706 237 ----------------------PEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPR 294 (346)
T ss_pred ----------------------ccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCc
Confidence 011233456667888999999998762 33444433 33444443211 1
Q ss_pred eEEEEEcCcEEEEEeCC-CCeEEEEeCCcc
Q psy9327 290 IYITKIKGNQVYYLDRE-CSPHVLRIDPTE 318 (641)
Q Consensus 290 ~~~~~~~g~~v~~~~~d-g~i~v~~~~~~~ 318 (641)
-+.+..+++.++++..+ ..+.++.+++..
T Consensus 295 ~F~i~~~g~~Liaa~q~sd~i~vf~~d~~T 324 (346)
T COG2706 295 DFNINPSGRFLIAANQKSDNITVFERDKET 324 (346)
T ss_pred cceeCCCCCEEEEEccCCCcEEEEEEcCCC
Confidence 12244567778777754 568888888643
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.6e-08 Score=100.83 Aligned_cols=218 Identities=18% Similarity=0.327 Sum_probs=149.6
Q ss_pred CCeEEEEEccCCC--eEEEEeCCCcEEEEECccCccc-----------------------------------ccc-cccc
Q psy9327 10 ARVKGLSFHPKRP--WILSSLHNGVIQLWDYRMNTLL-----------------------------------EKF-DEHE 51 (641)
Q Consensus 10 ~~V~~l~fspdg~--~Lasg~~dg~I~iWD~~~~~~l-----------------------------------~~~-~~h~ 51 (641)
..|+.+.|.++++ .++.++.|.+|++|.+...... +.+ ..|.
T Consensus 85 EKinkIrw~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHt 164 (433)
T KOG1354|consen 85 EKINKIRWLDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHT 164 (433)
T ss_pred hhhhhceecCCCCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccce
Confidence 4688899998765 5777788999999998532110 011 2477
Q ss_pred cCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee---EEEEccC-----CCC
Q psy9327 52 GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC---IFTLLGH-----LDY 123 (641)
Q Consensus 52 ~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~---~~~~~~h-----~~~ 123 (641)
-.|++|+++.|+..++++ +|=.|.+|+++--.. +--++.+ +.-
T Consensus 165 yhiNSIS~NsD~Et~lSA-----------------------------DdLRINLWnlei~d~sFnIVDIKP~nmEeLteV 215 (433)
T KOG1354|consen 165 YHINSISVNSDKETFLSA-----------------------------DDLRINLWNLEIIDQSFNIVDIKPANMEELTEV 215 (433)
T ss_pred eEeeeeeecCccceEeec-----------------------------cceeeeeccccccCCceeEEEccccCHHHHHHH
Confidence 789999999999999998 688999999864322 1222333 346
Q ss_pred eEEEEEccCC-CEEEEEeCCCeEEEEECCCCee------EEE----------EccCCCCEEEEEEecCCCEEEEEeCCCe
Q psy9327 124 IRTTFFHHEY-PWILSASDDQTIRIWYWQSRNC------ICV----------LTGHNHYVMCAQFHPTDDIVVSASLDQT 186 (641)
Q Consensus 124 V~~v~fsp~~-~~l~sgs~Dg~I~vWd~~~~~~------i~~----------l~~h~~~V~sl~fsp~g~~lvSgs~Dgt 186 (641)
|++..|||.. ++|+-.+..|+|++-|++.... ++. |.+--..|..+.|+++|+++++-+. -+
T Consensus 216 ITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-lt 294 (433)
T KOG1354|consen 216 ITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LT 294 (433)
T ss_pred HhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ce
Confidence 8889999964 5788888999999999985321 111 1122345788999999999997665 49
Q ss_pred EEEEecCC-CceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcce---EEEEEcCCcc
Q psy9327 187 IRVWDISG-LRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRV---KSGAWDESGV 262 (641)
Q Consensus 187 I~IWD~~~-~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I---~sla~~p~g~ 262 (641)
|++||+.. .+...+.+-|. +. ...++.+.+...| ..++|+.++.
T Consensus 295 vk~wD~nme~~pv~t~~vh~-~l-------------------------------r~kLc~lYEnD~IfdKFec~~sg~~~ 342 (433)
T KOG1354|consen 295 VKLWDLNMEAKPVETYPVHE-YL-------------------------------RSKLCSLYENDAIFDKFECSWSGNDS 342 (433)
T ss_pred eEEEeccccCCcceEEeehH-hH-------------------------------HHHHHHHhhccchhheeEEEEcCCcc
Confidence 99999943 34444444221 00 0111111122222 3489999999
Q ss_pred EEEEecCCeEEEEEcCCCCeEeccccc
Q psy9327 263 FIYTTSNHIKYAIVNGDHGIIRTLDLP 289 (641)
Q Consensus 263 ~L~t~s~~~k~~l~~~~~g~I~~~d~p 289 (641)
.+.||+-..-+.+++.+.|+.+....+
T Consensus 343 ~v~TGsy~n~frvf~~~~gsk~d~tl~ 369 (433)
T KOG1354|consen 343 YVMTGSYNNVFRVFNLARGSKEDFTLE 369 (433)
T ss_pred eEecccccceEEEecCCCCcceeeccc
Confidence 999999999999999888888766554
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=98.83 E-value=9.3e-08 Score=96.03 Aligned_cols=182 Identities=19% Similarity=0.297 Sum_probs=125.6
Q ss_pred ccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc-CCCCeEEEEE
Q psy9327 51 EGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG-HLDYIRTTFF 129 (641)
Q Consensus 51 ~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~-h~~~V~~v~f 129 (641)
+..+..++||+.-..++++. .|-.|++||-+. ++...++. ....|.+++|
T Consensus 98 ~~dlr~~aWhqH~~~fava~----------------------------nddvVriy~kss-t~pt~Lks~sQrnvtclaw 148 (445)
T KOG2139|consen 98 EIDLRGVAWHQHIIAFAVAT----------------------------NDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAW 148 (445)
T ss_pred hcceeeEeechhhhhhhhhc----------------------------cCcEEEEeccCC-CCCceecchhhcceeEEEe
Confidence 45788999999777778887 899999999776 55555553 4568999999
Q ss_pred ccCC-CEEEEEeCCCeEEEEECCCC----e----------eEEEEccCCCCEEEEEEecCCCEEEEEeC-CCeEEEEecC
Q psy9327 130 HHEY-PWILSASDDQTIRIWYWQSR----N----------CICVLTGHNHYVMCAQFHPTDDIVVSASL-DQTIRVWDIS 193 (641)
Q Consensus 130 sp~~-~~l~sgs~Dg~I~vWd~~~~----~----------~i~~l~~h~~~V~sl~fsp~g~~lvSgs~-DgtI~IWD~~ 193 (641)
-|.+ .-|+.|+ -+-|.+|..... + .+..-.|| .+|++++|++||..++++|- |..|.|||..
T Consensus 149 RPlsaselavgC-r~gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpd 226 (445)
T KOG2139|consen 149 RPLSASELAVGC-RAGICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPD 226 (445)
T ss_pred ccCCcceeeeee-cceeEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCC
Confidence 9954 4566665 466899976421 1 12223455 68999999999999999886 6789999999
Q ss_pred CCceeeecc-CCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC--CcceeeecCCcceEEEEEcCCccEEEEec
Q psy9327 194 GLRKKNVAP-GMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK--MEPLCNIHENTRVKSGAWDESGVFIYTTS 268 (641)
Q Consensus 194 ~~~~~~~~~-~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~--~~~~~~~~~~~~I~sla~~p~g~~L~t~s 268 (641)
++.++...+ +.+.. ++-...|-.+. +.....|...++|+.. .......-...+|.+.+|+|.|.+|..++
T Consensus 227 tg~~~pL~~~glgg~--slLkwSPdgd~---lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~ 299 (445)
T KOG2139|consen 227 TGQKIPLIPKGLGGF--SLLKWSPDGDV---LFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFAC 299 (445)
T ss_pred CCCcccccccCCCce--eeEEEcCCCCE---EEEecccceeeeehhcccceecceeccCCceeeeeecCCCCEEEEEE
Confidence 988766553 22222 11222232222 3345578999999633 23333334456999999999998877554
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=98.82 E-value=5.5e-09 Score=112.74 Aligned_cols=163 Identities=20% Similarity=0.435 Sum_probs=132.4
Q ss_pred eeccCCCCeEEEEEccCCC-eEEEEeCCCcEEEEECccCc-ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 4 KFETKSARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNT-LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~-~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.+.||+..|+.+-|+|..+ .+++++.|-.+..||+++.. .+..+.........++|+-..+.+++.+
T Consensus 109 ~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlass----------- 177 (1081)
T KOG0309|consen 109 VLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASS----------- 177 (1081)
T ss_pred EEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhc-----------
Confidence 3679999999999999765 78899999999999998753 4566666666778899997666666665
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCC-eeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCC------
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQSR------ 153 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~-~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~~~------ 153 (641)
+...|.+||.+.| .++.++++|...|..++|.. ....+.+++.|++|+.||+...
T Consensus 178 -----------------hg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~ 240 (1081)
T KOG0309|consen 178 -----------------HGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKR 240 (1081)
T ss_pred -----------------cCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccce
Confidence 7888999999865 78899999999999999986 3456889999999999997542
Q ss_pred -------------------------------------------------eeEEEEccCCCCEEEEEEecCC---------
Q psy9327 154 -------------------------------------------------NCICVLTGHNHYVMCAQFHPTD--------- 175 (641)
Q Consensus 154 -------------------------------------------------~~i~~l~~h~~~V~sl~fsp~g--------- 175 (641)
+++++|.||.+.|....|-..+
T Consensus 241 ~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~r 320 (1081)
T KOG0309|consen 241 TVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSR 320 (1081)
T ss_pred eccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCcc
Confidence 4577888999988776664321
Q ss_pred -CEEEEEeCCCeEEEEecCC
Q psy9327 176 -DIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 176 -~~lvSgs~DgtI~IWD~~~ 194 (641)
-.|++=|.|+++|+|-+.+
T Consensus 321 dfQLVTWSkD~~lrlWpI~~ 340 (1081)
T KOG0309|consen 321 DFQLVTWSKDQTLRLWPIDS 340 (1081)
T ss_pred ceeEEEeecCCceEeeeccH
Confidence 2699999999999998764
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=7.6e-07 Score=97.90 Aligned_cols=137 Identities=11% Similarity=0.022 Sum_probs=91.4
Q ss_pred cEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC
Q psy9327 32 VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR 111 (641)
Q Consensus 32 ~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~ 111 (641)
.+.++|..... .+.+..+..++.+..|+|||.+++..+.. .....|.+||+.++
T Consensus 199 ~l~i~d~dG~~-~~~l~~~~~~~~~p~wSPDG~~La~~s~~-------------------------~g~~~L~~~dl~tg 252 (448)
T PRK04792 199 QLMIADYDGYN-EQMLLRSPEPLMSPAWSPDGRKLAYVSFE-------------------------NRKAEIFVQDIYTQ 252 (448)
T ss_pred EEEEEeCCCCC-ceEeecCCCcccCceECCCCCEEEEEEec-------------------------CCCcEEEEEECCCC
Confidence 57777865443 24455567789999999999998876510 02246899999887
Q ss_pred eeEEEEccCCCCeEEEEEccCCCEEEE-EeCCCe--EEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeC-CC--
Q psy9327 112 KCIFTLLGHLDYIRTTFFHHEYPWILS-ASDDQT--IRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL-DQ-- 185 (641)
Q Consensus 112 ~~~~~~~~h~~~V~~v~fsp~~~~l~s-gs~Dg~--I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~-Dg-- 185 (641)
+... +....+.....+|+|+|+.|+. .+.++. |++||+.+++. ..+..+........|+|||++++..+. ++
T Consensus 253 ~~~~-lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~ 330 (448)
T PRK04792 253 VREK-VTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKP 330 (448)
T ss_pred CeEE-ecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCc
Confidence 6432 2222334456899999997764 555664 88889887764 445556666778899999998776554 34
Q ss_pred eEEEEecCCCc
Q psy9327 186 TIRVWDISGLR 196 (641)
Q Consensus 186 tI~IWD~~~~~ 196 (641)
.|.++|+.+++
T Consensus 331 ~Iy~~dl~~g~ 341 (448)
T PRK04792 331 QIYRVNLASGK 341 (448)
T ss_pred eEEEEECCCCC
Confidence 35555655543
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.7e-07 Score=100.67 Aligned_cols=164 Identities=10% Similarity=0.058 Sum_probs=106.6
Q ss_pred CCeEEEEEccCCCeEEEEeC-CC----cEEEEECccC---cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 10 ARVKGLSFHPKRPWILSSLH-NG----VIQLWDYRMN---TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~-dg----~I~iWD~~~~---~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+.....+|||||+.|+..+. +| .+.+|++..+ +.......+.+.....+|+|||..|+..+.
T Consensus 231 g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~---------- 300 (428)
T PRK01029 231 GNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSN---------- 300 (428)
T ss_pred CCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEEC----------
Confidence 34456799999998886553 23 3455776653 222222222334567899999998887651
Q ss_pred eecccCCcceeeEEEeeCCCeEEEE--ECCC-CeeEEEEccCCCCeEEEEEccCCCEEEEEeCC---CeEEEEECCCCee
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVW--NYKQ-RKCIFTLLGHLDYIRTTFFHHEYPWILSASDD---QTIRIWYWQSRNC 155 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vW--D~~t-~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D---g~I~vWd~~~~~~ 155 (641)
.+|..++| ++.. +.....+..+.+.+....|+|+|++|+..+.+ ..|.+||+.+++.
T Consensus 301 -----------------~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~ 363 (428)
T PRK01029 301 -----------------KDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRD 363 (428)
T ss_pred -----------------CCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCe
Confidence 45544455 4432 23344455555677889999999988876553 4799999988875
Q ss_pred EEEEccCCCCEEEEEEecCCCEEEEEeC---CCeEEEEecCCCceeeec
Q psy9327 156 ICVLTGHNHYVMCAQFHPTDDIVVSASL---DQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 156 i~~l~~h~~~V~sl~fsp~g~~lvSgs~---DgtI~IWD~~~~~~~~~~ 201 (641)
. .+......+....|+|||+.|+..+. +..+.+||+.+++.....
T Consensus 364 ~-~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt 411 (428)
T PRK01029 364 Y-QLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIV 411 (428)
T ss_pred E-EccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEee
Confidence 4 34333446778999999998765433 356888898877654443
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.1e-07 Score=94.84 Aligned_cols=250 Identities=18% Similarity=0.231 Sum_probs=154.7
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc-----cccccccc------------ccCeEEEEEeCCCC--EEEEe
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT-----LLEKFDEH------------EGPVRGICFHNQQP--IFVSG 69 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~-----~l~~~~~h------------~~~V~~i~fsp~~~--~l~sg 69 (641)
.+-|.++.|...|.+||+|..+|.|.++.-.... ....|+.| ...|..|.|.+++. .++.+
T Consensus 25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLls 104 (433)
T KOG1354|consen 25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLS 104 (433)
T ss_pred hcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEe
Confidence 3568899999999999999999999999743221 22334444 34788999998654 44444
Q ss_pred ceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe-----------------------------------eE
Q psy9327 70 GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK-----------------------------------CI 114 (641)
Q Consensus 70 s~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~-----------------------------------~~ 114 (641)
+ .|.+|++|-+.... +.
T Consensus 105 t----------------------------NdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~pr 156 (433)
T KOG1354|consen 105 T----------------------------NDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPR 156 (433)
T ss_pred c----------------------------CCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeee
Confidence 4 89999999874321 01
Q ss_pred EEE-ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe---eEEEEccC-----CCCEEEEEEecC-CCEEEEEeCC
Q psy9327 115 FTL-LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN---CICVLTGH-----NHYVMCAQFHPT-DDIVVSASLD 184 (641)
Q Consensus 115 ~~~-~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~---~i~~l~~h-----~~~V~sl~fsp~-g~~lvSgs~D 184 (641)
+.+ .+|.--|.++.++.|+..++|+ +|=.|.+|++.-.. .+--.+.+ +.-|++..|||. .++++-.|..
T Consensus 157 Rv~aNaHtyhiNSIS~NsD~Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSK 235 (433)
T KOG1354|consen 157 RVYANAHTYHINSISVNSDKETFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSK 235 (433)
T ss_pred eeccccceeEeeeeeecCccceEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCC
Confidence 111 2466678899999999877776 57899999986432 12223333 345899999996 4677778889
Q ss_pred CeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecC-CcceEEEEEcCCccE
Q psy9327 185 QTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHE-NTRVKSGAWDESGVF 263 (641)
Q Consensus 185 gtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~-~~~I~sla~~p~g~~ 263 (641)
|+||+-|++....-- .|.+..- ... .......+.+ -..|..+.|+++|++
T Consensus 236 GtIrLcDmR~~aLCd---~hsKlfE--epe------------------------dp~~rsffseiIsSISDvKFs~sGry 286 (433)
T KOG1354|consen 236 GTIRLCDMRQSALCD---AHSKLFE--EPE------------------------DPSSRSFFSEIISSISDVKFSHSGRY 286 (433)
T ss_pred CcEEEeechhhhhhc---chhhhhc--ccc------------------------CCcchhhHHHHhhhhhceEEccCCcE
Confidence 999999998522100 0000000 000 0011111112 355677899999999
Q ss_pred EEEec-CCeEEEEEcCCCCeEeccccc---------------eE-----EEEEcCcEEEEEeCCCCeEEEEeCC
Q psy9327 264 IYTTS-NHIKYAIVNGDHGIIRTLDLP---------------IY-----ITKIKGNQVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 264 L~t~s-~~~k~~l~~~~~g~I~~~d~p---------------~~-----~~~~~g~~v~~~~~dg~i~v~~~~~ 316 (641)
+++-+ ...+++-.+.+.+.+.+...- ++ .+..++..+.+++-....+++..+.
T Consensus 287 ilsRDyltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~ 360 (433)
T KOG1354|consen 287 ILSRDYLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLAR 360 (433)
T ss_pred EEEeccceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEecCCC
Confidence 98755 344444444455555433221 10 1223445788888888888887543
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=98.79 E-value=7.5e-06 Score=86.98 Aligned_cols=208 Identities=10% Similarity=0.164 Sum_probs=134.5
Q ss_pred CCCeEEEEEccCCCeEEEEeC-CCcEEEEECcc-Cccccc---c--c--------ccccCeEEEEEeCCCCEEEEeceee
Q psy9327 9 SARVKGLSFHPKRPWILSSLH-NGVIQLWDYRM-NTLLEK---F--D--------EHEGPVRGICFHNQQPIFVSGGKMI 73 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~-dg~I~iWD~~~-~~~l~~---~--~--------~h~~~V~~i~fsp~~~~l~sgs~~~ 73 (641)
......++++|++++|+++.. +|+|.++++.. |..... + . .-.....++.|+|+++++++..
T Consensus 86 g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~d--- 162 (345)
T PF10282_consen 86 GSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPD--- 162 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEE---
T ss_pred CCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEe---
Confidence 345567999999999998874 89999999976 433221 1 1 1234578999999999998876
Q ss_pred EEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe--e--EEEEc-cCCCCeEEEEEccCCCEEEEE-eCCCeEEE
Q psy9327 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK--C--IFTLL-GHLDYIRTTFFHHEYPWILSA-SDDQTIRI 147 (641)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~--~--~~~~~-~h~~~V~~v~fsp~~~~l~sg-s~Dg~I~v 147 (641)
.....|.+|++.... . ...+. ......+.++|+|+++++... -.+++|.+
T Consensus 163 ------------------------lG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v 218 (345)
T PF10282_consen 163 ------------------------LGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSV 218 (345)
T ss_dssp ------------------------TTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEE
T ss_pred ------------------------cCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEE
Confidence 255689999997654 2 22232 234567999999999977554 55889999
Q ss_pred EECC--CCe--eEEEEc----cC--CCCEEEEEEecCCCEEEEEe-CCCeEEEEecCC--CceeeeccCCCceeeecccC
Q psy9327 148 WYWQ--SRN--CICVLT----GH--NHYVMCAQFHPTDDIVVSAS-LDQTIRVWDISG--LRKKNVAPGMGKLVLSMKSK 214 (641)
Q Consensus 148 Wd~~--~~~--~i~~l~----~h--~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~--~~~~~~~~~~~~~v~s~~~~ 214 (641)
+++. ++. .+.... +. ......+.++|+|++|+++. .+.+|.+|++.. ++. ..
T Consensus 219 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l-~~-------------- 283 (345)
T PF10282_consen 219 FDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTL-TL-------------- 283 (345)
T ss_dssp EEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTE-EE--------------
T ss_pred EeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCce-EE--------------
Confidence 9988 443 222222 11 12578899999999876655 567899999843 111 10
Q ss_pred CCceeeeeeeeeeCCCeeEEEecCCCcceeeec-CCcceEEEEEcCCccEEEEec-CCeEEEEE--cCCCCeEecc
Q psy9327 215 HPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIH-ENTRVKSGAWDESGVFIYTTS-NHIKYAIV--NGDHGIIRTL 286 (641)
Q Consensus 215 ~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s-~~~k~~l~--~~~~g~I~~~ 286 (641)
+..+. .+.....++++|+|.+|+.++ ..+.+.++ +.++|.+...
T Consensus 284 ----------------------------~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~ 331 (345)
T PF10282_consen 284 ----------------------------VQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTPV 331 (345)
T ss_dssp ----------------------------EEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEE
T ss_pred ----------------------------EEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEEe
Confidence 11111 133467799999999999886 44455554 4566766543
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=98.77 E-value=3e-08 Score=107.22 Aligned_cols=156 Identities=20% Similarity=0.392 Sum_probs=119.6
Q ss_pred eEEEEEcc--CCCeEEEEeCCCcEEEEECccC--c-ccccccccccCeEEEEEeCCCCE-EEEeceeeEEeeeceeeecc
Q psy9327 12 VKGLSFHP--KRPWILSSLHNGVIQLWDYRMN--T-LLEKFDEHEGPVRGICFHNQQPI-FVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 12 V~~l~fsp--dg~~Lasg~~dg~I~iWD~~~~--~-~l~~~~~h~~~V~~i~fsp~~~~-l~sgs~~~~~~~~~~~~~~~ 85 (641)
|-...|+| ..++-+++.....-.+|++... + .-..+.+|+..|+.+.|+|+.+- +++++
T Consensus 70 vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcs--------------- 134 (1081)
T KOG0309|consen 70 VADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCS--------------- 134 (1081)
T ss_pred hcceecccCCCCceeEEecCcchhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeecc---------------
Confidence 44555665 4455555555666778997532 1 22234579999999999998774 44554
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCC-eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC-eeEEEEccCC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICVLTGHN 163 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~-~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~-~~i~~l~~h~ 163 (641)
-|..+..||+++- .++..+..-...-..++|+-..+.+.+.+....|.+||.+.+ .++..+++|.
T Consensus 135 -------------vdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~v 201 (1081)
T KOG0309|consen 135 -------------VDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHV 201 (1081)
T ss_pred -------------ccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEEeccCCCcceEEecccc
Confidence 8999999999875 566666665566678999998888888899999999999865 4788899999
Q ss_pred CCEEEEEEec-CCCEEEEEeCCCeEEEEecCCC
Q psy9327 164 HYVMCAQFHP-TDDIVVSASLDQTIRVWDISGL 195 (641)
Q Consensus 164 ~~V~sl~fsp-~g~~lvSgs~DgtI~IWD~~~~ 195 (641)
..|..+.|+. ....+.+++.|++|+.||....
T Consensus 202 s~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kS 234 (1081)
T KOG0309|consen 202 SSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKS 234 (1081)
T ss_pred eeeehHHHhhhhhhhhcccCCCCceeeeccccc
Confidence 9999999986 3567889999999999998753
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.76 E-value=6.1e-06 Score=99.25 Aligned_cols=254 Identities=11% Similarity=0.115 Sum_probs=155.6
Q ss_pred EEEEEccC-CCeEEEEeCCCcEEEEECccCcccccccc--------------cccCeEEEEEeCCCCEEEEeceeeEEee
Q psy9327 13 KGLSFHPK-RPWILSSLHNGVIQLWDYRMNTLLEKFDE--------------HEGPVRGICFHNQQPIFVSGGKMIVMAY 77 (641)
Q Consensus 13 ~~l~fspd-g~~Lasg~~dg~I~iWD~~~~~~l~~~~~--------------h~~~V~~i~fsp~~~~l~sgs~~~~~~~ 77 (641)
..++++++ +.++++-..++.|++||.. ++.+..+.+ +-..-.++++.+++..|.++.
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~-G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaD------- 642 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLD-GNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVAD------- 642 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCC-CCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEe-------
Confidence 46889875 5666777778999999975 444433322 112357899999888776665
Q ss_pred eceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccC-----------------CCCeEEEEEcc-CCCEEEEE
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH-----------------LDYIRTTFFHH-EYPWILSA 139 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h-----------------~~~V~~v~fsp-~~~~l~sg 139 (641)
+.++.|+++|..++. +.++.+- .....+++|+| ++.++++.
T Consensus 643 --------------------t~n~~Ir~id~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad 701 (1057)
T PLN02919 643 --------------------TENHALREIDFVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAM 701 (1057)
T ss_pred --------------------CCCceEEEEecCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEE
Confidence 266789999988765 3333210 11346899999 56677888
Q ss_pred eCCCeEEEEECCCCeeEEEEccC---------------CCCEEEEEEecCCC-EEEEEeCCCeEEEEecCCCceeeeccC
Q psy9327 140 SDDQTIRIWYWQSRNCICVLTGH---------------NHYVMCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKNVAPG 203 (641)
Q Consensus 140 s~Dg~I~vWd~~~~~~i~~l~~h---------------~~~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~~~~~~~~~~ 203 (641)
+.++.|++||..++... .+.+. ......++|+|++. ++++-+.++.|++||+.++.......+
T Consensus 702 ~~~~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg 780 (1057)
T PLN02919 702 AGQHQIWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGG 780 (1057)
T ss_pred CCCCeEEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEec
Confidence 88999999999877542 22111 12356799999988 555666789999999987543211110
Q ss_pred CCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE
Q psy9327 204 MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII 283 (641)
Q Consensus 204 ~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I 283 (641)
..+. .+....+++..+.. ..........++++++|...++-+.++++.+|+.+++.+
T Consensus 781 --~~~~-------------------~~~l~~fG~~dG~g--~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v 837 (1057)
T PLN02919 781 --DPTF-------------------SDNLFKFGDHDGVG--SEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRV 837 (1057)
T ss_pred --cccc-------------------CcccccccCCCCch--hhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeE
Confidence 0000 00000111111000 000011234688899988777777888888888877766
Q ss_pred ecc------------------ccceEE-EEEcCcEEEEEeCCCCeEEEEeCCcch
Q psy9327 284 RTL------------------DLPIYI-TKIKGNQVYYLDRECSPHVLRIDPTEF 319 (641)
Q Consensus 284 ~~~------------------d~p~~~-~~~~g~~v~~~~~dg~i~v~~~~~~~~ 319 (641)
..+ ..|..+ ...+|..+++-..+++|++|++++.+.
T Consensus 838 ~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 838 TTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred EEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 532 234333 223455555555778899999887553
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=98.75 E-value=8.9e-09 Score=120.44 Aligned_cols=154 Identities=14% Similarity=0.266 Sum_probs=129.3
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
++|+.+.|+.+|+-+..+..||.+-+|... .+.....+.|+.......|-. ..++++++.
T Consensus 2252 s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s----------------- 2311 (2439)
T KOG1064|consen 2252 SRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTSWQCHNKALSDFRFIG--SLLATAGRS----------------- 2311 (2439)
T ss_pred chhhhhhhcccCCceeeeccCCceeecccC-CcceeccccCCccccceeeee--hhhhccccC-----------------
Confidence 678889999999999999999999999976 667778888999988888866 566776631
Q ss_pred ceeeEEEeeCCCeEEEEECCC---CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQ---RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYV 166 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t---~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V 166 (641)
++++.+.+||.-- .-+++ ..|.+.++++++-|..+.|+|||.+|.|++||++.++.++++..
T Consensus 2312 --------~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~----- 2376 (2439)
T KOG1064|consen 2312 --------SDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA----- 2376 (2439)
T ss_pred --------CCCCcccchhcccCcccceee--eecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh-----
Confidence 4788999999642 22344 78999999999999999999999999999999999988777764
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC
Q psy9327 167 MCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203 (641)
Q Consensus 167 ~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~ 203 (641)
++ ...++++|+..|.++||++.....+.+++.
T Consensus 2377 ----~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~ 2408 (2439)
T KOG1064|consen 2377 ----LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFPS 2408 (2439)
T ss_pred ----hh-hhheeeccCcccceEEEEccccchhhcCch
Confidence 44 678999999999999999998877777763
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.2e-08 Score=99.97 Aligned_cols=147 Identities=14% Similarity=0.233 Sum_probs=120.3
Q ss_pred EEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEE
Q psy9327 25 LSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIK 104 (641)
Q Consensus 25 asg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~ 104 (641)
++.|.+-.|-+-|+.+|.. ..|. .++.|.++.|+..++++..|. .+|.|.
T Consensus 228 fs~G~sqqv~L~nvetg~~-qsf~-sksDVfAlQf~~s~nLv~~Gc----------------------------RngeI~ 277 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQ-QSFQ-SKSDVFALQFAGSDNLVFNGC----------------------------RNGEIF 277 (425)
T ss_pred ecccccceeEEEEeecccc-cccc-cchhHHHHHhcccCCeeEecc----------------------------cCCcEE
Confidence 4455567788999888743 4554 778899999999999999998 899999
Q ss_pred EEECCCC-----eeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCee---EEEEccCCCCEEEE--EEec
Q psy9327 105 VWNYKQR-----KCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQSRNC---ICVLTGHNHYVMCA--QFHP 173 (641)
Q Consensus 105 vWD~~t~-----~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~~~~~---i~~l~~h~~~V~sl--~fsp 173 (641)
+.|++.+ .+...+. |...|+++..-. +++.|++.+.+|+|++||.+--+| +.++.||...-.-+ -.++
T Consensus 278 ~iDLR~rnqG~~~~a~rly-h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~ 356 (425)
T KOG2695|consen 278 VIDLRCRNQGNGWCAQRLY-HDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKE 356 (425)
T ss_pred EEEeeecccCCCcceEEEE-cCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeeccccccccccccccc
Confidence 9999865 3444454 899999998777 788999999999999999998777 89999996654333 3456
Q ss_pred CCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 174 TDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 174 ~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
+...++++++|...|||.++.++...+++
T Consensus 357 eeg~I~s~GdDcytRiWsl~~ghLl~tip 385 (425)
T KOG2695|consen 357 EEGSIFSVGDDCYTRIWSLDSGHLLCTIP 385 (425)
T ss_pred ccceEEEccCeeEEEEEecccCceeeccC
Confidence 67889999999999999999999888877
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.6e-07 Score=95.97 Aligned_cols=150 Identities=18% Similarity=0.260 Sum_probs=111.4
Q ss_pred EEEEccCCC-eE--EEEeCCC---------cEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 14 GLSFHPKRP-WI--LSSLHNG---------VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 14 ~l~fspdg~-~L--asg~~dg---------~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.+.|++-|. +| ++..-|. ++.+.+.+ |.....--...+||.++.|+|+++-|++.-
T Consensus 222 qm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~-g~s~~V~L~k~GPVhdv~W~~s~~EF~Vvy----------- 289 (566)
T KOG2315|consen 222 QMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQ-GESVSVPLLKEGPVHDVTWSPSGREFAVVY----------- 289 (566)
T ss_pred EEEeccCCceEEEEEEEeecCCCccccccceEEEEEec-CceEEEecCCCCCceEEEECCCCCEEEEEE-----------
Confidence 466777665 22 2332243 46666665 332222224689999999999998877763
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC---CeEEEEECCCCeeEEE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD---QTIRIWYWQSRNCICV 158 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D---g~I~vWd~~~~~~i~~ 158 (641)
|-.-.++.++|++ +.+++.| -.++=.++-|+|.|++++.+|.+ |.|-|||+.+.+++..
T Consensus 290 ---------------GfMPAkvtifnlr-~~~v~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~ 351 (566)
T KOG2315|consen 290 ---------------GFMPAKVTIFNLR-GKPVFDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAK 351 (566)
T ss_pred ---------------ecccceEEEEcCC-CCEeEeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccc
Confidence 1256789999976 6667666 46777899999999999988864 7999999999999998
Q ss_pred EccCCCCEEEEEEecCCCEEEEEeC------CCeEEEEecCCC
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSASL------DQTIRVWDISGL 195 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs~------DgtI~IWD~~~~ 195 (641)
+..-.. +-..|+|||.+++|++. |..++||+..+.
T Consensus 352 ~~a~~t--t~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~ 392 (566)
T KOG2315|consen 352 FKAANT--TVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGS 392 (566)
T ss_pred cccCCc--eEEEEcCCCcEEEEEeccccEEecCCeEEEEecCc
Confidence 875443 45789999999999876 788999998763
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.1e-06 Score=90.09 Aligned_cols=280 Identities=12% Similarity=0.043 Sum_probs=161.4
Q ss_pred CCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeee---ceeeecccCCc-------
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQ---GCILESRNEPC------- 89 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~---~~~~~~~~~~~------- 89 (641)
.+..+++++.+|.+..+|..+|+.+.+++.......+.... ++..++.+.....+.++ |.+.+....+.
T Consensus 64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v~-~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~ 142 (377)
T TIGR03300 64 AGGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGAD-GGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSPPL 142 (377)
T ss_pred ECCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEEc-CCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecCCE
Confidence 46788888899999999999999887765443333333343 22222322233333332 33332221111
Q ss_pred -ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeE-----EEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCC
Q psy9327 90 -LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIR-----TTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163 (641)
Q Consensus 90 -~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~-----~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~ 163 (641)
......+++.++.+..||.++|+.+..+........ ..... +..++.++.++.+..+|.++++.+.......
T Consensus 143 v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~--~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~ 220 (377)
T TIGR03300 143 VANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIA--DGGVLVGFAGGKLVALDLQTGQPLWEQRVAL 220 (377)
T ss_pred EECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEE--CCEEEEECCCCEEEEEEccCCCEeeeecccc
Confidence 012344567899999999999998888764332211 11111 3467888889999999999998665432110
Q ss_pred C-------CEEEEEEec--CCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEE
Q psy9327 164 H-------YVMCAQFHP--TDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLH 234 (641)
Q Consensus 164 ~-------~V~sl~fsp--~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~ 234 (641)
. ....+.-+| .+..++.++.+|.+..||..+++..-..... . ...|.. ....+..+..++.+.
T Consensus 221 ~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~-~------~~~p~~-~~~~vyv~~~~G~l~ 292 (377)
T TIGR03300 221 PKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDAS-S------YQGPAV-DDNRLYVTDADGVVV 292 (377)
T ss_pred CCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeeccC-C------ccCceE-eCCEEEEECCCCeEE
Confidence 0 000011111 3567888889999999999988765433211 0 011111 011244456788888
Q ss_pred EecC-CCcceeeecC-Cc-ceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe-cccc---ceEE-EEEcCcEEEEEeCC
Q psy9327 235 ICNR-KMEPLCNIHE-NT-RVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR-TLDL---PIYI-TKIKGNQVYYLDRE 306 (641)
Q Consensus 235 i~d~-~~~~~~~~~~-~~-~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~-~~d~---p~~~-~~~~g~~v~~~~~d 306 (641)
.+|. +++.+..... .. ...+... .+..+++++.++.+++++..+|.+. .++. ++.. -...++.++..+.|
T Consensus 293 ~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~~~~l~v~~~d 370 (377)
T TIGR03300 293 ALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTDGSGIASPPVVVGDGLLVQTRD 370 (377)
T ss_pred EEECCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCccccCCEEECCEEEEEeCC
Confidence 8884 4544433322 11 1122222 2568889999999999998877654 2222 1111 11345679999999
Q ss_pred CCeEEE
Q psy9327 307 CSPHVL 312 (641)
Q Consensus 307 g~i~v~ 312 (641)
|.+..+
T Consensus 371 G~l~~~ 376 (377)
T TIGR03300 371 GDLYAF 376 (377)
T ss_pred ceEEEe
Confidence 998876
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.8e-07 Score=90.33 Aligned_cols=154 Identities=14% Similarity=0.212 Sum_probs=101.3
Q ss_pred ccCCCeEEEEeCCCcEEEEECccCc-ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEE
Q psy9327 18 HPKRPWILSSLHNGVIQLWDYRMNT-LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSV 96 (641)
Q Consensus 18 spdg~~Lasg~~dg~I~iWD~~~~~-~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (641)
+--++.++++..||.+.+.+.+.-- ...+...-...-.+.+....+..+.+++-. .+
T Consensus 98 s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g-~~--------------------- 155 (319)
T KOG4714|consen 98 TMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCG-NW--------------------- 155 (319)
T ss_pred cccCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcc-eE---------------------
Confidence 3345679999999999999976511 111121111111223333456666665410 00
Q ss_pred eeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCe-eEEEEccCCCCEEEEEEecC
Q psy9327 97 LGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRN-CICVLTGHNHYVMCAQFHPT 174 (641)
Q Consensus 97 ~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~-~i~~l~~h~~~V~sl~fsp~ 174 (641)
-.-+..+.|+++..+.+..-..-.+.|.+++-||.++ .+++|++||.+-+||+++.. +...++.|...+..+-|||.
T Consensus 156 -n~~d~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk 234 (319)
T KOG4714|consen 156 -NAQDNFYANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPK 234 (319)
T ss_pred -eeccceeeecccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCC
Confidence 0233456677654332222222334599999999655 66788899999999999875 44567899999999999995
Q ss_pred -CCEEEEEeCCCeEEEEecCC
Q psy9327 175 -DDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 175 -g~~lvSgs~DgtI~IWD~~~ 194 (641)
+..|++++.||.+--||-++
T Consensus 235 ~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 235 NPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred CchheeEecCCCcEEEEcCCC
Confidence 67899999999999999876
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=98.68 E-value=7.4e-06 Score=89.70 Aligned_cols=117 Identities=11% Similarity=0.219 Sum_probs=86.9
Q ss_pred CceeeccCCCCeEEEEEccCC------------CeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCC---C-C
Q psy9327 1 MLTKFETKSARVKGLSFHPKR------------PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ---Q-P 64 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg------------~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~---~-~ 64 (641)
+++.++.|...|+.+.|.|.. .++|++...|.|.+||...+..+..++.|..+|..++|-+. . .
T Consensus 47 ~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd 126 (1062)
T KOG1912|consen 47 LIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRD 126 (1062)
T ss_pred hhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchh
Confidence 367889999999999998731 26788888999999999999999999999999999999763 3 2
Q ss_pred EEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCC
Q psy9327 65 IFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQ 143 (641)
Q Consensus 65 ~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg 143 (641)
.+++-. ....+.+|+..+|+.............|+.+.| +.+++..-+..|
T Consensus 127 ~LlaIh----------------------------~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g 178 (1062)
T KOG1912|consen 127 VLLAIH----------------------------GSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKG 178 (1062)
T ss_pred eeEEec----------------------------CCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCc
Confidence 344433 567888998888888777766566666666666 333443333333
Q ss_pred eE
Q psy9327 144 TI 145 (641)
Q Consensus 144 ~I 145 (641)
.+
T Consensus 179 ~v 180 (1062)
T KOG1912|consen 179 FV 180 (1062)
T ss_pred eE
Confidence 33
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.65 E-value=5e-06 Score=87.28 Aligned_cols=174 Identities=16% Similarity=0.186 Sum_probs=119.6
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
++...-++...+|||.|.+|++....| |.+|+...+..+.++ ....|..+.|+|.+.+|.+=++..+.
T Consensus 28 ~~~~~~p~~~~~~SP~G~~l~~~~~~~-V~~~~g~~~~~l~~~--~~~~V~~~~fSP~~kYL~tw~~~pi~--------- 95 (561)
T COG5354 28 FESENWPVAYVSESPLGTYLFSEHAAG-VECWGGPSKAKLVRF--RHPDVKYLDFSPNEKYLVTWSREPII--------- 95 (561)
T ss_pred ccccCcchhheeecCcchheehhhccc-eEEccccchhheeee--ecCCceecccCcccceeeeeccCCcc---------
Confidence 334456788999999999999887765 999998887766666 34578999999999999997631111
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCC--eE-EEEEccCCCEEEEEeCCCeEEEEECCCCe----eEE
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY--IR-TTFFHHEYPWILSASDDQTIRIWYWQSRN----CIC 157 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~--V~-~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~----~i~ 157 (641)
+|.....-. ..+..+.+||+.+|..+..+.+...+ .. -+.|+-++.+.+-- -...++|+++ +.. ...
T Consensus 96 --~pe~e~sp~--~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~n~~~~p~~ 169 (561)
T COG5354 96 --EPEIEISPF--TSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEI-TDNIEEHPFK 169 (561)
T ss_pred --ChhhccCCc--cccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEec-CCccccCchh
Confidence 111111000 14458999999999999999876665 44 57888888876644 3457889987 332 112
Q ss_pred EEccCCCCEEEEEEecCC--CEEEE-----EeCCCeEEEEecCCCcee
Q psy9327 158 VLTGHNHYVMCAQFHPTD--DIVVS-----ASLDQTIRVWDISGLRKK 198 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~g--~~lvS-----gs~DgtI~IWD~~~~~~~ 198 (641)
.++ ...|....|+|.+ +.|+. ...++++++|.+...+.+
T Consensus 170 ~lr--~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l 215 (561)
T COG5354 170 NLR--PVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVL 215 (561)
T ss_pred hcc--ccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCee
Confidence 222 3567888899864 33443 566889999998754433
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=98.64 E-value=6.4e-06 Score=85.63 Aligned_cols=145 Identities=14% Similarity=0.198 Sum_probs=119.6
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCC-cEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNG-VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg-~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
+|.++|.-..+..+++-++.|..|| .+-|+|.++++ +.+++..-+.|.++..+|+|+.++++.
T Consensus 357 ~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e-~kr~e~~lg~I~av~vs~dGK~~vvaN--------------- 420 (668)
T COG4946 357 GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGE-VKRIEKDLGNIEAVKVSPDGKKVVVAN--------------- 420 (668)
T ss_pred CCCCceEEEEEccCCcceEEeccCCceEEEEecCCce-EEEeeCCccceEEEEEcCCCcEEEEEc---------------
Confidence 5778899889988888899999999 89999998875 466777889999999999999999997
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC----CeEEEEECCCCeeEEEEcc
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD----QTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D----g~I~vWd~~~~~~i~~l~~ 161 (641)
+...+.+.|+.+|+....=+...+-|...+|||+++|||-+--+ +.|+++|+..++.... ..
T Consensus 421 -------------dr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~v-TT 486 (668)
T COG4946 421 -------------DRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDV-TT 486 (668)
T ss_pred -------------CceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEe-cC
Confidence 78899999999998766666677889999999999999987655 5799999988775433 33
Q ss_pred CCCCEEEEEEecCCCEEEEE
Q psy9327 162 HNHYVMCAQFHPTDDIVVSA 181 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSg 181 (641)
.+++=.+-+|.|+++.|.--
T Consensus 487 ~ta~DfsPaFD~d~ryLYfL 506 (668)
T COG4946 487 PTAYDFSPAFDPDGRYLYFL 506 (668)
T ss_pred CcccccCcccCCCCcEEEEE
Confidence 44445567899999876543
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.7e-06 Score=103.89 Aligned_cols=158 Identities=10% Similarity=0.057 Sum_probs=114.6
Q ss_pred eEEEEEcc-CCCeEEEEeCCCcEEEEECccCccccccc---------c------cccCeEEEEEeCCCCEEEEeceeeEE
Q psy9327 12 VKGLSFHP-KRPWILSSLHNGVIQLWDYRMNTLLEKFD---------E------HEGPVRGICFHNQQPIFVSGGKMIVM 75 (641)
Q Consensus 12 V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~~~~l~~~~---------~------h~~~V~~i~fsp~~~~l~sgs~~~~~ 75 (641)
-.+++|+| ++.++++.+.++.|++||..++... .+. + .-....+|+|+|++..+.++.
T Consensus 685 P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVAD----- 758 (1057)
T PLN02919 685 PWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIAD----- 758 (1057)
T ss_pred CeEEEEecCCCeEEEEECCCCeEEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEE-----
Confidence 35789999 5666677778899999998766431 111 1 112456799999998666665
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE-------------ccC--------CCCeEEEEEccCCC
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL-------------LGH--------LDYIRTTFFHHEYP 134 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~-------------~~h--------~~~V~~v~fsp~~~ 134 (641)
+.+++|++||+.++...... -.+ .....+++++++|.
T Consensus 759 ----------------------s~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~ 816 (1057)
T PLN02919 759 ----------------------SESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQ 816 (1057)
T ss_pred ----------------------CCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCc
Confidence 37899999999876532111 001 11246899999999
Q ss_pred EEEEEeCCCeEEEEECCCCeeEEEEc-------------cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce
Q psy9327 135 WILSASDDQTIRIWYWQSRNCICVLT-------------GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 197 (641)
Q Consensus 135 ~l~sgs~Dg~I~vWd~~~~~~i~~l~-------------~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~ 197 (641)
++++-+.++.|++||..++....... ++......++++++|+++++-+.+++|++||+.+++.
T Consensus 817 LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 817 IYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred EEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 99999999999999998876543221 1223577899999999999999999999999988764
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.6e-07 Score=92.06 Aligned_cols=160 Identities=18% Similarity=0.222 Sum_probs=118.6
Q ss_pred eeeccCCCCeEEEEEccCC-CeEEEEeCCCcEEEEECc-cCccccc-ccccccCeEEEEEeC-CCCEEEEeceeeEEeee
Q psy9327 3 TKFETKSARVKGLSFHPKR-PWILSSLHNGVIQLWDYR-MNTLLEK-FDEHEGPVRGICFHN-QQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg-~~Lasg~~dg~I~iWD~~-~~~~l~~-~~~h~~~V~~i~fsp-~~~~l~sgs~~~~~~~~ 78 (641)
++++.|.-.....+|+... +++.+||.||.+.-||.+ .++.+.. .+-|...|.+|.-+| ...++++|+
T Consensus 159 q~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGs-------- 230 (339)
T KOG0280|consen 159 QTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGS-------- 230 (339)
T ss_pred ccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEec--------
Confidence 4788999999999999754 588999999999999998 3333333 456899999999886 567889997
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECC-CCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCe--
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYK-QRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRN-- 154 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~-t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~-- 154 (641)
.|..|++||.+ .++++..-. -.+.|.-+.+||.-. .++.++.-.-.+|-+.+.+.
T Consensus 231 --------------------YDe~i~~~DtRnm~kPl~~~~-v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~~~~e 289 (339)
T KOG0280|consen 231 --------------------YDECIRVLDTRNMGKPLFKAK-VGGGVWRIKHHPEIFHRLLAACMHNGAKILDSSDKVLE 289 (339)
T ss_pred --------------------cccceeeeehhcccCccccCc-cccceEEEEecchhhhHHHHHHHhcCceEEEecccccc
Confidence 99999999998 678776544 348999999999543 34445555556777665432
Q ss_pred ---eEEEEccCCCCEEEEEEecCCCEEEEEe-CCCeEE-EEe
Q psy9327 155 ---CICVLTGHNHYVMCAQFHPTDDIVVSAS-LDQTIR-VWD 191 (641)
Q Consensus 155 ---~i~~l~~h~~~V~sl~fsp~g~~lvSgs-~DgtI~-IWD 191 (641)
.....+.|.+-+....|......++|+| .|+.++ +|-
T Consensus 290 ~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl 331 (339)
T KOG0280|consen 290 FQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWL 331 (339)
T ss_pred hheeeeccccccceeeccccccccceeeeeeccccceeeeee
Confidence 3344567887778888866666788876 466655 664
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.6e-05 Score=85.63 Aligned_cols=223 Identities=10% Similarity=0.015 Sum_probs=132.7
Q ss_pred eEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEE-----
Q psy9327 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVM----- 167 (641)
Q Consensus 93 ~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~----- 167 (641)
.+.+++.++.+..+|..+|+.+...... +.+.+.-.. .+..++.++.|+.+..||.++++.+..+........
T Consensus 107 ~v~v~~~~g~l~ald~~tG~~~W~~~~~-~~~~~~p~v-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~ 184 (377)
T TIGR03300 107 LVFVGTEKGEVIALDAEDGKELWRAKLS-SEVLSPPLV-ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSA 184 (377)
T ss_pred EEEEEcCCCEEEEEECCCCcEeeeeccC-ceeecCCEE-ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCC
Confidence 3446678999999999999988776533 222211111 245677788899999999999988777653322111
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC---CCc-eeeec--ccCCCceeeeeeeeeeCCCeeEEEec-CCC
Q psy9327 168 CAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG---MGK-LVLSM--KSKHPIWKYCKPVKYCNPKHTLHICN-RKM 240 (641)
Q Consensus 168 sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~---~~~-~v~s~--~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~ 240 (641)
+... .+..++.++.++.+..+|..+++..-.... .+. ....+ ....|+.. ...+..+..++.+..+| .++
T Consensus 185 sp~~--~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~-~~~vy~~~~~g~l~a~d~~tG 261 (377)
T TIGR03300 185 SPVI--ADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVD-GGQVYAVSYQGRVAALDLRSG 261 (377)
T ss_pred CCEE--ECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEE-CCEEEEEEcCCEEEEEECCCC
Confidence 1111 135778888899999999988875432210 000 00000 01112111 11133445677888888 345
Q ss_pred cceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEeccccc------eEEEEEcCcEEEEEeCCCCeEEEEe
Q psy9327 241 EPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLP------IYITKIKGNQVYYLDRECSPHVLRI 314 (641)
Q Consensus 241 ~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~p------~~~~~~~g~~v~~~~~dg~i~v~~~ 314 (641)
+.+...... .....+. .+..++.++.++.+..++..+|.+. |..+ .......++.++..+.+|.+.+++.
T Consensus 262 ~~~W~~~~~-~~~~p~~--~~~~vyv~~~~G~l~~~d~~tG~~~-W~~~~~~~~~~ssp~i~g~~l~~~~~~G~l~~~d~ 337 (377)
T TIGR03300 262 RVLWKRDAS-SYQGPAV--DDNRLYVTDADGVVVALDRRSGSEL-WKNDELKYRQLTAPAVVGGYLVVGDFEGYLHWLSR 337 (377)
T ss_pred cEEEeeccC-CccCceE--eCCEEEEECCCCeEEEEECCCCcEE-EccccccCCccccCEEECCEEEEEeCCCEEEEEEC
Confidence 444433321 1112222 3557788888999998888777643 2221 0111235788999999999999998
Q ss_pred CCcchhhhHH
Q psy9327 315 DPTEFKFKLA 324 (641)
Q Consensus 315 ~~~~~~~k~~ 324 (641)
++++...+..
T Consensus 338 ~tG~~~~~~~ 347 (377)
T TIGR03300 338 EDGSFVARLK 347 (377)
T ss_pred CCCCEEEEEE
Confidence 8877765544
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=98.62 E-value=5.5e-08 Score=101.89 Aligned_cols=201 Identities=17% Similarity=0.213 Sum_probs=144.5
Q ss_pred EEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCC-------CeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCe
Q psy9327 114 IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS-------RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQT 186 (641)
Q Consensus 114 ~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~-------~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~Dgt 186 (641)
+..|.||+..|+.++--.+.+-|++++.|.+|++|.++. ..|.+++..|..+|.++.|-.+.+.++| -||-
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S--cD~g 805 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIAS--CDGG 805 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeee--ccCc
Confidence 567889999999998888888899999999999999864 3488899999999999999988887765 4889
Q ss_pred EEEEecCCCceeeecc-----CCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeec------CCcceEE
Q psy9327 187 IRVWDISGLRKKNVAP-----GMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIH------ENTRVKS 254 (641)
Q Consensus 187 I~IWD~~~~~~~~~~~-----~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~------~~~~I~s 254 (641)
|.+||.--++...... +.+..++++...+...- ++.|+...+++++| +..+..+... +...+.+
T Consensus 806 iHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~il----iAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~ 881 (1034)
T KOG4190|consen 806 IHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHIL----IAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRA 881 (1034)
T ss_pred ceeecccccchhHhhhcCcccCCCceeEecccCcchhe----eeeccchhhheeeecccccceeeEEeccCCCCchheeE
Confidence 9999987666555332 23455666554332211 34567888999999 4444433332 2456788
Q ss_pred EEEcCCccEEEEecCCeEEEEEcCCCCe-Eeccccc----eEEEEEcCcEEEEEeCCCCeEE-EEeCCcchh
Q psy9327 255 GAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDLP----IYITKIKGNQVYYLDRECSPHV-LRIDPTEFK 320 (641)
Q Consensus 255 la~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~p----~~~~~~~g~~v~~~~~dg~i~v-~~~~~~~~~ 320 (641)
++..|.|++++.+-+.|.+.+.+..+|. |..|.-- +.....++..++...-|.++.| |..-.+...
T Consensus 882 iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqlaapsdq~L~~saldHslaVnWhaldgimh 953 (1034)
T KOG4190|consen 882 IAVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLAAPSDQALAQSALDHSLAVNWHALDGIMH 953 (1034)
T ss_pred EEeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhcCchhHHHHhhcccceeEeeehhcCCeee
Confidence 9999999999999999999999999887 6667321 1112234455555566666666 755444433
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=98.58 E-value=6.4e-05 Score=78.93 Aligned_cols=237 Identities=10% Similarity=0.059 Sum_probs=143.7
Q ss_pred CCCeEEEEeCC-----CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeE
Q psy9327 20 KRPWILSSLHN-----GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIK 94 (641)
Q Consensus 20 dg~~Lasg~~d-----g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~ 94 (641)
++.+++..... |+|.+.|..+++.+..+..-..+- .+ ++||++.+.++.... ...
T Consensus 11 ~~~~v~V~d~~~~~~~~~v~ViD~~~~~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~------------------~R~ 70 (352)
T TIGR02658 11 DARRVYVLDPGHFAATTQVYTIDGEAGRVLGMTDGGFLPN-PV-VASDGSFFAHASTVY------------------SRI 70 (352)
T ss_pred CCCEEEEECCcccccCceEEEEECCCCEEEEEEEccCCCc-ee-ECCCCCEEEEEeccc------------------ccc
Confidence 44445544332 899999999999888886544443 35 999999999887000 000
Q ss_pred EEeeCCCeEEEEECCCCeeEEEEccCC-------CCeEEEEEccCCCEEEEEe-C-CCeEEEEECCCCeeEEEEccCC--
Q psy9327 95 SVLGDDYKIKVWNYKQRKCIFTLLGHL-------DYIRTTFFHHEYPWILSAS-D-DQTIRIWYWQSRNCICVLTGHN-- 163 (641)
Q Consensus 95 ~~~s~Dg~I~vWD~~t~~~~~~~~~h~-------~~V~~v~fsp~~~~l~sgs-~-Dg~I~vWd~~~~~~i~~l~~h~-- 163 (641)
.-+-.+..|.+||..+.+.+..+.--. .....++++|+|++++... + +..|-+.|+.+++.+..+.-..
T Consensus 71 ~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~ 150 (352)
T TIGR02658 71 ARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCY 150 (352)
T ss_pred ccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCc
Confidence 000167899999999999998886422 2334789999999888766 4 7899999999876554332100
Q ss_pred -----------------------------CCEEEE--------------EEec-CCCEEEEEeCCCeEEEEecCCCc---
Q psy9327 164 -----------------------------HYVMCA--------------QFHP-TDDIVVSASLDQTIRVWDISGLR--- 196 (641)
Q Consensus 164 -----------------------------~~V~sl--------------~fsp-~g~~lvSgs~DgtI~IWD~~~~~--- 196 (641)
..+.+. .|.+ +|.++..... |+|.+-|+.+..
T Consensus 151 ~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~ 229 (352)
T TIGR02658 151 HIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKF 229 (352)
T ss_pred EEEEecCCccEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCccee
Confidence 001111 1123 5666655554 888888854322
Q ss_pred --eeeeccCC--------Cc-eeeecc-cCCCceeeeeeeeee-------CCCeeEEEec-CCCcceeeecCCcceEEEE
Q psy9327 197 --KKNVAPGM--------GK-LVLSMK-SKHPIWKYCKPVKYC-------NPKHTLHICN-RKMEPLCNIHENTRVKSGA 256 (641)
Q Consensus 197 --~~~~~~~~--------~~-~v~s~~-~~~~v~~~~~~l~s~-------~~d~~I~i~d-~~~~~~~~~~~~~~I~sla 256 (641)
....+... +. ....+. ....+|- +..+ ...+.|.++| .+.+.+..+.-+.++..++
T Consensus 230 ~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV----~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~~~~~ia 305 (352)
T TIGR02658 230 LPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYL----LADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGHEIDSIN 305 (352)
T ss_pred cceeeeccccccccccCCCcceeEEEcCCCCEEEE----EecCCccccccCCCCEEEEEECCCCeEEEEEeCCCceeeEE
Confidence 11111100 00 000000 0011111 0100 1235788888 6677788888889999999
Q ss_pred EcCCcc-EEEEec-CCeEEEEEcCCCC
Q psy9327 257 WDESGV-FIYTTS-NHIKYAIVNGDHG 281 (641)
Q Consensus 257 ~~p~g~-~L~t~s-~~~k~~l~~~~~g 281 (641)
++|||+ .|++++ .++.+.+.+..++
T Consensus 306 vS~Dgkp~lyvtn~~s~~VsViD~~t~ 332 (352)
T TIGR02658 306 VSQDAKPLLYALSTGDKTLYIFDAETG 332 (352)
T ss_pred ECCCCCeEEEEeCCCCCcEEEEECcCC
Confidence 999999 888776 4566667666555
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.2e-05 Score=87.27 Aligned_cols=295 Identities=13% Similarity=0.168 Sum_probs=164.1
Q ss_pred EEccCCCeEEEEeCCCcEEEEECccCcccccccccccC-eEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeE
Q psy9327 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGP-VRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIK 94 (641)
Q Consensus 16 ~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~-V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~ 94 (641)
+|++.+..++.|+.+|.|.+.+ +.-+.+..|+.+... |..+....+..+|++.+.
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln-~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~E----------------------- 85 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILN-SSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGE----------------------- 85 (933)
T ss_pred EEcCCCceEEEeeccccEEEec-ccceeeehheecchhhhhHhhcccCceEEEEEee-----------------------
Confidence 4788889999999999998887 334555888888777 555544455577777762
Q ss_pred EEeeCCC----eEEEEECCCC------eeE--EEEcc-----CCCCeEEEEEccCCCEEEEEeCCCeEEEEECC---CC-
Q psy9327 95 SVLGDDY----KIKVWNYKQR------KCI--FTLLG-----HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ---SR- 153 (641)
Q Consensus 95 ~~~s~Dg----~I~vWD~~t~------~~~--~~~~~-----h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~---~~- 153 (641)
+++ .+++||++.. .++ +.+.+ ...++.+++.|.+-..+|.|-.||.|..+.=. .+
T Consensus 86 ----d~~~np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrg 161 (933)
T KOG2114|consen 86 ----DEQGNPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRG 161 (933)
T ss_pred ----cCCCCceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccc
Confidence 222 6999998642 233 12222 24578899999999999999999999988421 11
Q ss_pred eeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce-eeeccCCCceeeecccCCCceeeeeeeeeeCCCee
Q psy9327 154 NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK-KNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHT 232 (641)
Q Consensus 154 ~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~-~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~ 232 (641)
....-...-.++|+.+++..++..++-+.....|..|.+++... ...+..+|-.+.|.....+.... -|..+..
T Consensus 162 sr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qf-----Ica~~e~ 236 (933)
T KOG2114|consen 162 SRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQF-----ICAGSEF 236 (933)
T ss_pred cceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccE-----EEecCce
Confidence 11222234567899999999887744444455899999986552 33355555555543333322211 1224556
Q ss_pred EEEecCCCcceeeecC-CcceEEEEEcCCccEEEEecCCeEE--EEEcCCCCeEe-cccc--ceEE-----------EEE
Q psy9327 233 LHICNRKMEPLCNIHE-NTRVKSGAWDESGVFIYTTSNHIKY--AIVNGDHGIIR-TLDL--PIYI-----------TKI 295 (641)
Q Consensus 233 I~i~d~~~~~~~~~~~-~~~I~sla~~p~g~~L~t~s~~~k~--~l~~~~~g~I~-~~d~--p~~~-----------~~~ 295 (641)
+.+|+..+...+.--+ +..-. +-|...|..|+.....+.- ...+....+|. ..|. +... .-.
T Consensus 237 l~fY~sd~~~~cfaf~~g~kk~-~~~~~~g~~L~v~~~~~~~~~s~s~ss~~~i~~~~d~~n~~v~ys~vl~~l~d~l~~ 315 (933)
T KOG2114|consen 237 LYFYDSDGRGPCFAFEVGEKKE-MLVFSFGLLLCVTTDKGTENTSLSNSSSNRIFKAYDLRNRYVLYSSVLEDLSDNLIE 315 (933)
T ss_pred EEEEcCCCcceeeeecCCCeEE-EEEEecCEEEEEEccCCCCCcccCccchhheeehhhhcCcccchHHhHHHHHHHHHh
Confidence 7777744333222222 11111 1122223333322211100 01111111221 1111 1000 112
Q ss_pred cCcEEEEEeCCCCeEEEEeCCcchhhhHHHhccchHHHHHHHhcCcccc
Q psy9327 296 KGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVG 344 (641)
Q Consensus 296 ~g~~v~~~~~dg~i~v~~~~~~~~~~k~~l~~~~~~~~l~~~~~s~l~~ 344 (641)
.+...+.++.||.+....-.+.+.+...-..+.-|.-++.+.+..++-+
T Consensus 316 w~~~~~vltsdg~~~~L~ek~le~kL~iL~kK~ly~~Ai~LAk~~~~d~ 364 (933)
T KOG2114|consen 316 WSFDCLVLTSDGVVHELIEKDLETKLDILFKKNLYKVAINLAKSQHLDE 364 (933)
T ss_pred cCCcEEEEecCCceeeeeeccHHHHHHHHHHhhhHHHHHHHHHhcCCCH
Confidence 2346677788888877765555555555445555666666666654444
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.5e-05 Score=84.85 Aligned_cols=144 Identities=9% Similarity=-0.019 Sum_probs=94.8
Q ss_pred CeEEEEEccCCCe-EEEEeC---CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeeccc
Q psy9327 11 RVKGLSFHPKRPW-ILSSLH---NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRN 86 (641)
Q Consensus 11 ~V~~l~fspdg~~-Lasg~~---dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~ 86 (641)
.+..-.|+|||+. ++..+. +..|.++|+.+++... +....+......|+|||..++....
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~-lt~~~g~~~~~~~SPDG~~la~~~~--------------- 252 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEK-IASSQGMLVVSDVSKDGSKLLLTMA--------------- 252 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEE-EecCCCcEEeeEECCCCCEEEEEEc---------------
Confidence 5678999999984 554433 3568888988875432 3234556667889999988776541
Q ss_pred CCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC-C--eEEEEECCCCeeEEEEccCC
Q psy9327 87 EPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD-Q--TIRIWYWQSRNCICVLTGHN 163 (641)
Q Consensus 87 ~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D-g--~I~vWd~~~~~~i~~l~~h~ 163 (641)
...+..|.++|+.+++. ..+..+.+......|+|||+.|+-.++. + .|.+.|+.+++...... ..
T Consensus 253 ----------~~g~~~Iy~~dl~~g~~-~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~-~g 320 (419)
T PRK04043 253 ----------PKGQPDIYLYDTNTKTL-TQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVF-HG 320 (419)
T ss_pred ----------cCCCcEEEEEECCCCcE-EEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCcc-CC
Confidence 01346788889888764 3444444433456899999977766542 2 68888988776533322 11
Q ss_pred CCEEEEEEecCCCEEEEEeCC
Q psy9327 164 HYVMCAQFHPTDDIVVSASLD 184 (641)
Q Consensus 164 ~~V~sl~fsp~g~~lvSgs~D 184 (641)
.. ...|+|+|+.++-.+..
T Consensus 321 ~~--~~~~SPDG~~Ia~~~~~ 339 (419)
T PRK04043 321 KN--NSSVSTYKNYIVYSSRE 339 (419)
T ss_pred Cc--CceECCCCCEEEEEEcC
Confidence 12 24899999988766543
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.9e-05 Score=84.06 Aligned_cols=285 Identities=9% Similarity=0.089 Sum_probs=181.3
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
+.+++..++|++|+++|.+. +..++|++..++..+.+.... .+.++.|+|.+.++.+=-...+.. +
T Consensus 34 ~~~~~v~~~S~~G~lfA~~~-~~~v~i~~~~~~~~~lt~~~~--~~~~L~fSP~g~yL~T~e~~~i~~-----------~ 99 (566)
T KOG2315|consen 34 SRPCNVFAYSNNGRLFAYSD-NQVVKVFEIATLKVVLCVELK--KTYDLLFSPKGNYLLTWEPWAIYG-----------P 99 (566)
T ss_pred CCcceeEEEcCCCcEEEEEc-CCeEEEEEccCCcEEEEeccc--eeeeeeeccccccccccccccccc-----------C
Confidence 44577889999999877765 568999999888644444333 889999999999988743100000 0
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee-EEEEccCCCCEE
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC-ICVLTGHNHYVM 167 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~-i~~l~~h~~~V~ 167 (641)
. . .....+++|+.+++.....+......-.+..|+.|..+.+ =-..+.+.+|+..+.+. .+.+ |...|+
T Consensus 100 ~------~-~~~pn~~v~~vet~~~~s~~q~k~Q~~W~~qfs~dEsl~a-rlv~nev~f~~~~~f~~~~~kl--~~~~i~ 169 (566)
T KOG2315|consen 100 K------N-ASNPNVLVYNVETGVQRSQIQKKMQNGWVPQFSIDESLAA-RLVSNEVQFYDLGSFKTIQHKL--SVSGIT 169 (566)
T ss_pred C------C-CCCCceeeeeeccceehhheehhhhcCcccccccchhhhh-hhhcceEEEEecCCccceeeee--ecccee
Confidence 0 0 0234688999999766655544322226788998886433 22346799999876443 2333 577888
Q ss_pred EEEEecCC--CEEEE-----EeCCCeEEEEecCCCceeee---------------ccCCCceee----------------
Q psy9327 168 CAQFHPTD--DIVVS-----ASLDQTIRVWDISGLRKKNV---------------APGMGKLVL---------------- 209 (641)
Q Consensus 168 sl~fsp~g--~~lvS-----gs~DgtI~IWD~~~~~~~~~---------------~~~~~~~v~---------------- 209 (641)
.+.++|.+ ..+++ .+.-+.+|||-..-...... +...+..++
T Consensus 170 ~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYG 249 (566)
T KOG2315|consen 170 MLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYG 249 (566)
T ss_pred eEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccc
Confidence 89999863 34443 44556899997752111000 000011111
Q ss_pred ----------------ecccCCCceeeeee-------eeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEE
Q psy9327 210 ----------------SMKSKHPIWKYCKP-------VKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYT 266 (641)
Q Consensus 210 ----------------s~~~~~~v~~~~~~-------l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t 266 (641)
.+....||.++.++ +++|-.-..+.++|.+...+..+.+ ++=+++-|+|.|++++.
T Consensus 250 Eq~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~~v~df~e-gpRN~~~fnp~g~ii~l 328 (566)
T KOG2315|consen 250 EQTLYLLATQGESVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGKPVFDFPE-GPRNTAFFNPHGNIILL 328 (566)
T ss_pred cceEEEEEecCceEEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCCCCEeEeCCC-CCccceEECCCCCEEEE
Confidence 12234455555543 5666677788899988888777765 45567889999988886
Q ss_pred ec---CCeEEEEEcCCCCe----EeccccceEEEEEcCcEEEEEe------CCCCeEEEEeCCcc
Q psy9327 267 TS---NHIKYAIVNGDHGI----IRTLDLPIYITKIKGNQVYYLD------RECSPHVLRIDPTE 318 (641)
Q Consensus 267 ~s---~~~k~~l~~~~~g~----I~~~d~p~~~~~~~g~~v~~~~------~dg~i~v~~~~~~~ 318 (641)
++ -.|.+-+|+..+.. +...+..+..|+.+|..+++.. -|..+++|+.....
T Consensus 329 AGFGNL~G~mEvwDv~n~K~i~~~~a~~tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~~ 393 (566)
T KOG2315|consen 329 AGFGNLPGDMEVWDVPNRKLIAKFKAANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGSL 393 (566)
T ss_pred eecCCCCCceEEEeccchhhccccccCCceEEEEcCCCcEEEEEeccccEEecCCeEEEEecCce
Confidence 65 46677777765532 2334555777889999988876 46788999887543
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=98.56 E-value=1e-05 Score=84.16 Aligned_cols=148 Identities=14% Similarity=0.131 Sum_probs=117.3
Q ss_pred CCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeC
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGD 99 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 99 (641)
+|++++..+. |...|.+.-.+-.+. . +|.+.|+-..+..++.-++.|. .
T Consensus 331 ~Gd~ia~VSR-GkaFi~~~~~~~~iq-v-~~~~~VrY~r~~~~~e~~vigt----------------------------~ 379 (668)
T COG4946 331 NGDYIALVSR-GKAFIMRPWDGYSIQ-V-GKKGGVRYRRIQVDPEGDVIGT----------------------------N 379 (668)
T ss_pred CCcEEEEEec-CcEEEECCCCCeeEE-c-CCCCceEEEEEccCCcceEEec----------------------------c
Confidence 5777777765 666666644443222 2 5778899999988888888887 7
Q ss_pred CC-eEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEE
Q psy9327 100 DY-KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIV 178 (641)
Q Consensus 100 Dg-~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~l 178 (641)
|| .+-|+|..+++. ..+...-+.|.++..+++|+.++.+.+...+.+.|+.+++....-+...+-|+...|||+++|+
T Consensus 380 dgD~l~iyd~~~~e~-kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~i 458 (668)
T COG4946 380 DGDKLGIYDKDGGEV-KRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWI 458 (668)
T ss_pred CCceEEEEecCCceE-EEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeE
Confidence 77 999999998874 5566688999999999999999999999999999999998665555667789999999999999
Q ss_pred EEEeCC----CeEEEEecCCCceee
Q psy9327 179 VSASLD----QTIRVWDISGLRKKN 199 (641)
Q Consensus 179 vSgs~D----gtI~IWD~~~~~~~~ 199 (641)
+-+--+ +.|+++|+.+++...
T Consensus 459 AYafP~gy~tq~Iklydm~~~Kiy~ 483 (668)
T COG4946 459 AYAFPEGYYTQSIKLYDMDGGKIYD 483 (668)
T ss_pred EEecCcceeeeeEEEEecCCCeEEE
Confidence 976554 578999988866543
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.53 E-value=7.3e-05 Score=75.34 Aligned_cols=214 Identities=15% Similarity=0.133 Sum_probs=135.3
Q ss_pred EEEEcc-CCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEe-CCCCEEEEeceeeEEeeeceeeecccCCcce
Q psy9327 14 GLSFHP-KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH-NQQPIFVSGGKMIVMAYQGCILESRNEPCLF 91 (641)
Q Consensus 14 ~l~fsp-dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fs-p~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~ 91 (641)
+..|.+ ++.++++....+.|.-||..+++... +.... ..++++. +++.++++.
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~~g~l~v~~---------------------- 58 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRPDGRLYVAD---------------------- 58 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECTTSEEEEEE----------------------
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC--CceEEEEccCCEEEEEE----------------------
Confidence 678998 67777777778999999988775422 22222 7788888 665555554
Q ss_pred eeEEEeeCCCeEEEEECCCCeeEEEEcc-----CCCCeEEEEEccCCCEEEEEeCC--------CeEEEEECCCCeeEEE
Q psy9327 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLG-----HLDYIRTTFFHHEYPWILSASDD--------QTIRIWYWQSRNCICV 158 (641)
Q Consensus 92 ~~~~~~s~Dg~I~vWD~~t~~~~~~~~~-----h~~~V~~v~fsp~~~~l~sgs~D--------g~I~vWd~~~~~~i~~ 158 (641)
. +.+.++|..+++....... .....+++++.|+|.+.++.... +.|..++.. ++....
T Consensus 59 -------~-~~~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~ 129 (246)
T PF08450_consen 59 -------S-GGIAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVV 129 (246)
T ss_dssp -------T-TCEEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEE
T ss_pred -------c-CceEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEE
Confidence 3 4456669999865443332 34567899999999988876654 568888877 554433
Q ss_pred EccCCCCEEEEEEecCCCEEE-EEeCCCeEEEEecCCCce----eeec---cCCC--ceeeecccCCCceeeeeeeeeeC
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVV-SASLDQTIRVWDISGLRK----KNVA---PGMG--KLVLSMKSKHPIWKYCKPVKYCN 228 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lv-Sgs~DgtI~IWD~~~~~~----~~~~---~~~~--~~v~s~~~~~~v~~~~~~l~s~~ 228 (641)
.. .......++|+|+++.|+ +-+..+.|..+|+..... ...+ +... ..=+++.....+|. +..
T Consensus 130 ~~-~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~v------a~~ 202 (246)
T PF08450_consen 130 AD-GLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWV------ADW 202 (246)
T ss_dssp EE-EESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEE------EEE
T ss_pred ec-CcccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEE------EEc
Confidence 33 456688999999998665 667788999999864222 1111 1111 01122222222332 222
Q ss_pred CCeeEEEecCCCcceeeecCC-cceEEEEEc-CCccEEEEec
Q psy9327 229 PKHTLHICNRKMEPLCNIHEN-TRVKSGAWD-ESGVFIYTTS 268 (641)
Q Consensus 229 ~d~~I~i~d~~~~~~~~~~~~-~~I~sla~~-p~g~~L~t~s 268 (641)
..+.|.++|..++.+..+.-. ..+++++|. ++...|+.++
T Consensus 203 ~~~~I~~~~p~G~~~~~i~~p~~~~t~~~fgg~~~~~L~vTt 244 (246)
T PF08450_consen 203 GGGRIVVFDPDGKLLREIELPVPRPTNCAFGGPDGKTLYVTT 244 (246)
T ss_dssp TTTEEEEEETTSCEEEEEE-SSSSEEEEEEESTTSSEEEEEE
T ss_pred CCCEEEEECCCccEEEEEcCCCCCEEEEEEECCCCCEEEEEe
Confidence 677888888777777766654 688999994 6666666554
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.53 E-value=3.4e-07 Score=63.76 Aligned_cols=39 Identities=33% Similarity=0.698 Sum_probs=37.1
Q ss_pred CeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEe
Q psy9327 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191 (641)
Q Consensus 153 ~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD 191 (641)
++++.++.+|.+.|.+++|+|++..|+|++.|++|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 367899999999999999999999999999999999998
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.6e-05 Score=79.39 Aligned_cols=226 Identities=12% Similarity=0.068 Sum_probs=132.9
Q ss_pred CCCcEEEEECccCcccccccccccCeEEEE--EeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEE
Q psy9327 29 HNGVIQLWDYRMNTLLEKFDEHEGPVRGIC--FHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVW 106 (641)
Q Consensus 29 ~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~--fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vW 106 (641)
.+|+|..||.++|+.+.+.... ....+.. ..+++..+++++ .++.+..|
T Consensus 1 ~~g~l~~~d~~tG~~~W~~~~~-~~~~~~~~~~~~~~~~v~~~~----------------------------~~~~l~~~ 51 (238)
T PF13360_consen 1 DDGTLSALDPRTGKELWSYDLG-PGIGGPVATAVPDGGRVYVAS----------------------------GDGNLYAL 51 (238)
T ss_dssp -TSEEEEEETTTTEEEEEEECS-SSCSSEEETEEEETTEEEEEE----------------------------TTSEEEEE
T ss_pred CCCEEEEEECCCCCEEEEEECC-CCCCCccceEEEeCCEEEEEc----------------------------CCCEEEEE
Confidence 3789999999999988877531 1121122 233455566665 89999999
Q ss_pred ECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE-ccCC---CCEEEEEEecCCCEEEEEe
Q psy9327 107 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL-TGHN---HYVMCAQFHPTDDIVVSAS 182 (641)
Q Consensus 107 D~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l-~~h~---~~V~sl~fsp~g~~lvSgs 182 (641)
|..+|+.+..+.. .+++.... ...+..++.++.|+.+..+|..+++.+... .... ...........+..++.+.
T Consensus 52 d~~tG~~~W~~~~-~~~~~~~~-~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (238)
T PF13360_consen 52 DAKTGKVLWRFDL-PGPISGAP-VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGT 129 (238)
T ss_dssp ETTTSEEEEEEEC-SSCGGSGE-EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEE
T ss_pred ECCCCCEEEEeec-ccccccee-eecccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEe
Confidence 9999999988875 33222212 224556777778889999999999988774 3221 1122333333488899999
Q ss_pred CCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCcc
Q psy9327 183 LDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGV 262 (641)
Q Consensus 183 ~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~ 262 (641)
.++.+..+|.++++.+-..+....... ..+..+ ...-....++ ++
T Consensus 130 ~~g~l~~~d~~tG~~~w~~~~~~~~~~-------------------------------~~~~~~--~~~~~~~~~~-~~- 174 (238)
T PF13360_consen 130 SSGKLVALDPKTGKLLWKYPVGEPRGS-------------------------------SPISSF--SDINGSPVIS-DG- 174 (238)
T ss_dssp TCSEEEEEETTTTEEEEEEESSTT-SS---------------------------------EEEE--TTEEEEEECC-TT-
T ss_pred ccCcEEEEecCCCcEEEEeecCCCCCC-------------------------------cceeee--cccccceEEE-CC-
Confidence 999999999999887655542110000 000000 0000111111 22
Q ss_pred EEEEecCCeEEEEEcCCCCeEeccccc---eEE-EEEcCcEEEEEeCCCCeEEEEeCCcchhh
Q psy9327 263 FIYTTSNHIKYAIVNGDHGIIRTLDLP---IYI-TKIKGNQVYYLDRECSPHVLRIDPTEFKF 321 (641)
Q Consensus 263 ~L~t~s~~~k~~l~~~~~g~I~~~d~p---~~~-~~~~g~~v~~~~~dg~i~v~~~~~~~~~~ 321 (641)
.++.++.++.+...+.++|... |..+ ... ....++.++..+.++.+.+|+..+++..+
T Consensus 175 ~v~~~~~~g~~~~~d~~tg~~~-w~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~d~~tG~~~W 236 (238)
T PF13360_consen 175 RVYVSSGDGRVVAVDLATGEKL-WSKPISGIYSLPSVDGGTLYVTSSDGRLYALDLKTGKVVW 236 (238)
T ss_dssp EEEEECCTSSEEEEETTTTEEE-EEECSS-ECECEECCCTEEEEEETTTEEEEEETTTTEEEE
T ss_pred EEEEEcCCCeEEEEECCCCCEE-EEecCCCccCCceeeCCEEEEEeCCCEEEEEECCCCCEEe
Confidence 4444444443222255555543 4222 111 34567888888888999999888876543
|
... |
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=98.50 E-value=2e-05 Score=83.51 Aligned_cols=147 Identities=13% Similarity=0.164 Sum_probs=101.4
Q ss_pred EEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCccee
Q psy9327 13 KGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFR 92 (641)
Q Consensus 13 ~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~ 92 (641)
+-+.|||.|.||++=..-| |.+|--.+-..+.+| .| ..|.-+.|||+.++|++=+.... ...
T Consensus 214 tyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF-~H-p~Vq~idfSP~EkYLVT~s~~p~---------------~~~ 275 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRF-YH-PGVQFIDFSPNEKYLVTYSPEPI---------------IVE 275 (698)
T ss_pred eeEEecCCceEEEEEeccc-eeeecCccHHHHHhc-cC-CCceeeecCCccceEEEecCCcc---------------ccC
Confidence 4578999999999987766 899987766677777 34 35788999999999999762100 000
Q ss_pred eEEEeeCCCeEEEEECCCCeeEEEEccCCC--Ce-EEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEE
Q psy9327 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLD--YI-RTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169 (641)
Q Consensus 93 ~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~--~V-~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl 169 (641)
.. -.....+.|||+.+|.....|....+ .+ .-..||.|++++|.-.. .+|.||+..+-.++..-.-.-..|...
T Consensus 276 ~~--d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~F 352 (698)
T KOG2314|consen 276 ED--DNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDF 352 (698)
T ss_pred cc--cCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCc
Confidence 00 01346799999999998888865322 22 23589999999987665 678899876533321111123567788
Q ss_pred EEecCCCEEEE
Q psy9327 170 QFHPTDDIVVS 180 (641)
Q Consensus 170 ~fsp~g~~lvS 180 (641)
.|+|.+..|+-
T Consensus 353 swsP~~~llAY 363 (698)
T KOG2314|consen 353 SWSPTSNLLAY 363 (698)
T ss_pred ccCCCcceEEE
Confidence 89988777653
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.5e-05 Score=78.76 Aligned_cols=160 Identities=12% Similarity=0.224 Sum_probs=107.4
Q ss_pred EEEEEccCCCeEEEEeCCCcEEEEECccCcccccccc-------cccCeEEEEEeCCC-------CEEEEeceeeEEeee
Q psy9327 13 KGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDE-------HEGPVRGICFHNQQ-------PIFVSGGKMIVMAYQ 78 (641)
Q Consensus 13 ~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~-------h~~~V~~i~fsp~~-------~~l~sgs~~~~~~~~ 78 (641)
.-++||||+.+||.+...|+|+++|+.. ..+..+.. -+..|.++.|.+-. .+++..
T Consensus 47 Rkl~WSpD~tlLa~a~S~G~i~vfdl~g-~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~--------- 116 (282)
T PF15492_consen 47 RKLAWSPDCTLLAYAESTGTIRVFDLMG-SELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVIN--------- 116 (282)
T ss_pred eEEEECCCCcEEEEEcCCCeEEEEeccc-ceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEe---------
Confidence 5689999999999999999999999854 33333322 23466777775432 122222
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCC-----CeeEEE--Ecc-CCCCeEEEEEccCCCEEEEEeCC--------
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ-----RKCIFT--LLG-HLDYIRTTFFHHEYPWILSASDD-------- 142 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t-----~~~~~~--~~~-h~~~V~~v~fsp~~~~l~sgs~D-------- 142 (641)
.+|.++-|-+.. .+..++ |.. +...|.++.++|..++|+.||..
T Consensus 117 --------------------Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~ 176 (282)
T PF15492_consen 117 --------------------YRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSK 176 (282)
T ss_pred --------------------ccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCcccc
Confidence 666666665432 233333 333 36689999999998888776541
Q ss_pred ---CeEEEEECCCCe--------------------eEEE------E---ccCCCCEEEEEEecCCCEEEEEeCCCeEEEE
Q psy9327 143 ---QTIRIWYWQSRN--------------------CICV------L---TGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190 (641)
Q Consensus 143 ---g~I~vWd~~~~~--------------------~i~~------l---~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IW 190 (641)
.-+..|.+-++. .... + ....+.|..+..||||..|++.+.+|.|.+|
T Consensus 177 a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW 256 (282)
T PF15492_consen 177 ASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLW 256 (282)
T ss_pred ccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEE
Confidence 135566442211 0100 0 1235779999999999999999999999999
Q ss_pred ecCCCceeeecc
Q psy9327 191 DISGLRKKNVAP 202 (641)
Q Consensus 191 D~~~~~~~~~~~ 202 (641)
++-+.+.+....
T Consensus 257 ~iPsL~~~~~W~ 268 (282)
T PF15492_consen 257 EIPSLRLQRSWK 268 (282)
T ss_pred ecCcchhhcccc
Confidence 999988777665
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.50 E-value=2.9e-06 Score=93.51 Aligned_cols=151 Identities=13% Similarity=0.128 Sum_probs=116.8
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
+.++|+++| +..++-|.++|.|.+.+.+ +.. .+...|+.. .-+|.++++|+
T Consensus 40 D~is~~av~--~~~~~~GtH~g~v~~~~~~-~~~-~~~~~~s~~------~~~Gey~asCS------------------- 90 (846)
T KOG2066|consen 40 DAISCCAVH--DKFFALGTHRGAVYLTTCQ-GNP-KTNFDHSSS------ILEGEYVASCS------------------- 90 (846)
T ss_pred hHHHHHHhh--cceeeeccccceEEEEecC-Ccc-ccccccccc------ccCCceEEEec-------------------
Confidence 456677776 5689999999999999975 444 444355555 56899999998
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccC-----CCEEEEEeCCCeEEEEECC--CCeeEEEEccC
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE-----YPWILSASDDQTIRIWYWQ--SRNCICVLTGH 162 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~-----~~~l~sgs~Dg~I~vWd~~--~~~~i~~l~~h 162 (641)
.||+|.|-.+-+.+...++. ...++.+++++|+ .+.+++||.-| +.++.-+ ..+.-..+..-
T Consensus 91 ---------~DGkv~I~sl~~~~~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~ 159 (846)
T KOG2066|consen 91 ---------DDGKVVIGSLFTDDEITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEG 159 (846)
T ss_pred ---------CCCcEEEeeccCCccceeEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecC
Confidence 99999999999888777766 5678999999997 45899999998 7666422 11111246667
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~ 203 (641)
.++|.++.|+ |++++-++++| |+|||..+++.+..++.
T Consensus 160 eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~~ 197 (846)
T KOG2066|consen 160 EGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQRLTNIPP 197 (846)
T ss_pred ccceEEEEec--CcEEEEecCCC-cEEEeccccceeeccCC
Confidence 8899999996 99999999875 89999999887776654
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.50 E-value=4.1e-07 Score=92.90 Aligned_cols=103 Identities=19% Similarity=0.277 Sum_probs=82.2
Q ss_pred eCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEE
Q psy9327 28 LHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWN 107 (641)
Q Consensus 28 ~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD 107 (641)
+....+.+|....+... -.-+|-..+..++|+||+.+++++. .|..|+|-.
T Consensus 129 gD~~~~di~s~~~~~~~-~~lGhvSml~dVavS~D~~~IitaD----------------------------RDEkIRvs~ 179 (390)
T KOG3914|consen 129 GDVYSFDILSADSGRCE-PILGHVSMLLDVAVSPDDQFIITAD----------------------------RDEKIRVSR 179 (390)
T ss_pred CCceeeeeecccccCcc-hhhhhhhhhheeeecCCCCEEEEec----------------------------CCceEEEEe
Confidence 33444555554444332 2347889999999999999999998 899999998
Q ss_pred CCCCeeEEEE-ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc
Q psy9327 108 YKQRKCIFTL-LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 108 ~~t~~~~~~~-~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~ 160 (641)
+..--.+..| .||...|..++.-++.. |+|||.|+++++||+.+++++.++.
T Consensus 180 ypa~f~IesfclGH~eFVS~isl~~~~~-LlS~sGD~tlr~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 180 YPATFVIESFCLGHKEFVSTISLTDNYL-LLSGSGDKTLRLWDITSGKLLDTCD 232 (390)
T ss_pred cCcccchhhhccccHhheeeeeeccCce-eeecCCCCcEEEEecccCCcccccc
Confidence 8766556665 46999999999988775 9999999999999999999887664
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.49 E-value=4.2e-07 Score=63.28 Aligned_cols=39 Identities=33% Similarity=0.582 Sum_probs=37.2
Q ss_pred CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEE
Q psy9327 111 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149 (641)
Q Consensus 111 ~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd 149 (641)
|+++.++.+|.++|.+++|+|++.+|++|+.|++|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 468899999999999999999999999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=98.49 E-value=4.9e-05 Score=90.02 Aligned_cols=302 Identities=11% Similarity=0.115 Sum_probs=161.6
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEE----ECccCcccccccccccCeEEEEEeCCCCEEEEec---eeeEEeeece
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLW----DYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG---KMIVMAYQGC 80 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iW----D~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs---~~~~~~~~~~ 80 (641)
..+.|.++.|-++..-++.+..+|.|.+. |..+. .+.....-+..|.+++||||+..++... ....+..+.-
T Consensus 74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~-~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd 152 (928)
T PF04762_consen 74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDED-EIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRDFD 152 (928)
T ss_pred CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCc-eeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccce
Confidence 34789999999999999999999999999 44333 2333334678999999999999877664 1111221111
Q ss_pred eeecc-cCCcc--eeeEEEeeCCCeEEEEECCCCee--------------EEEEccCCCCeEEEEEccCCCEEEEEeC--
Q psy9327 81 ILESR-NEPCL--FRIKSVLGDDYKIKVWNYKQRKC--------------IFTLLGHLDYIRTTFFHHEYPWILSASD-- 141 (641)
Q Consensus 81 ~~~~~-~~~~~--~~~~~~~s~Dg~I~vWD~~t~~~--------------~~~~~~h~~~V~~v~fsp~~~~l~sgs~-- 141 (641)
+.... ..+.. ..-.++.|+..+=.-+.-+.|+. ...+. +++.-..++|-.||.+||+.+-
T Consensus 153 ~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~~~ 231 (928)
T PF04762_consen 153 PISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAVSSVEP 231 (928)
T ss_pred EEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEEEEEEEEc
Confidence 11110 00000 00011111111100010011111 01122 3445567999999999998764
Q ss_pred -C---CeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeC---CCeEEEEecCCCceeee-cc--CCCceeeec
Q psy9327 142 -D---QTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL---DQTIRVWDISGLRKKNV-AP--GMGKLVLSM 211 (641)
Q Consensus 142 -D---g~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~---DgtI~IWD~~~~~~~~~-~~--~~~~~v~s~ 211 (641)
+ ..++||+- .|....+-..-.+--.+++|-|.|++|++... ...|.+|.-++.+.-.. ++ .....+..+
T Consensus 232 ~~~~~R~iRVy~R-eG~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l 310 (928)
T PF04762_consen 232 ETGSRRVIRVYSR-EGELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIEL 310 (928)
T ss_pred CCCceeEEEEECC-CceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecCCcEeeeEecCCCCCCceeeEE
Confidence 2 58999995 46655554433444457899999999998765 34677776555432221 11 111222221
Q ss_pred ccCCCceeeeeeeeeeCCCeeEEEecCCC-----cceeeecCCcceEEEEEcCCc-cEEEEecCCeEEE----EEc---C
Q psy9327 212 KSKHPIWKYCKPVKYCNPKHTLHICNRKM-----EPLCNIHENTRVKSGAWDESG-VFIYTTSNHIKYA----IVN---G 278 (641)
Q Consensus 212 ~~~~~v~~~~~~l~s~~~d~~I~i~d~~~-----~~~~~~~~~~~I~sla~~p~g-~~L~t~s~~~k~~----l~~---~ 278 (641)
.|.....+........|.+|..+- ++...+.....+..+.|||.. ..|...+.++.+. .|. +
T Consensus 311 -----~Wn~ds~iLAv~~~~~vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s 385 (928)
T PF04762_consen 311 -----AWNSDSEILAVWLEDRVQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRS 385 (928)
T ss_pred -----EECCCCCEEEEEecCCceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEec
Confidence 222222233333344588887432 233334445556669999862 2333333323322 111 1
Q ss_pred ------CCCeEeccccc--------------------------e--EEEEEcCcEEEEEeCCCCeEEEEeCCc
Q psy9327 279 ------DHGIIRTLDLP--------------------------I--YITKIKGNQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 279 ------~~g~I~~~d~p--------------------------~--~~~~~~g~~v~~~~~dg~i~v~~~~~~ 317 (641)
+.|.+-++|.. + ..+..++..+..+..||.+.+|..+..
T Consensus 386 ~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~~ 458 (928)
T PF04762_consen 386 PGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWDLK 458 (928)
T ss_pred CCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCCCeEEEEECCCCEEEEEecCC
Confidence 22344333331 1 113345556888999999999886543
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.9e-07 Score=92.08 Aligned_cols=124 Identities=23% Similarity=0.394 Sum_probs=101.7
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc-----ccccccccccCeEEEEEeC-CCCEEEEeceeeEEeeecee
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT-----LLEKFDEHEGPVRGICFHN-QQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~-----~l~~~~~h~~~V~~i~fsp-~~~~l~sgs~~~~~~~~~~~ 81 (641)
.++.|.++.|+..++++..|..+|.|...|++.+. ....+ -|+..|+++..-. ++++|++++
T Consensus 251 sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh~Ssvtslq~Lq~s~q~LmaS~----------- 318 (425)
T KOG2695|consen 251 SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YHDSSVTSLQILQFSQQKLMASD----------- 318 (425)
T ss_pred cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE-EcCcchhhhhhhccccceEeecc-----------
Confidence 45779999999999999999999999999998652 22223 5889999988776 677787777
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCee---EEEEccCCCCeEE--EEEccCCCEEEEEeCCCeEEEEECCCCeeE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC---IFTLLGHLDYIRT--TFFHHEYPWILSASDDQTIRIWYWQSRNCI 156 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~---~~~~~~h~~~V~~--v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i 156 (641)
.+|+|++||.+.-++ +.+++||-..-.- +..+++...++++++|.-.+||.++++..+
T Consensus 319 -----------------M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl 381 (425)
T KOG2695|consen 319 -----------------MTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLL 381 (425)
T ss_pred -----------------CcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCcee
Confidence 999999999987766 8999999764333 344567778999999999999999999988
Q ss_pred EEEc
Q psy9327 157 CVLT 160 (641)
Q Consensus 157 ~~l~ 160 (641)
.++.
T Consensus 382 ~tip 385 (425)
T KOG2695|consen 382 CTIP 385 (425)
T ss_pred eccC
Confidence 8775
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=98.40 E-value=6.8e-05 Score=88.80 Aligned_cols=242 Identities=11% Similarity=0.084 Sum_probs=148.8
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECc---------------c--------Ccccccccc----------------
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYR---------------M--------NTLLEKFDE---------------- 49 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~---------------~--------~~~l~~~~~---------------- 49 (641)
.+.|.+++||||+.+|+....+|++.+-+-. . |+.-++|.+
T Consensus 120 d~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~ 199 (928)
T PF04762_consen 120 DSGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVP 199 (928)
T ss_pred cCcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCC
Confidence 4689999999999999999999998776531 0 111122221
Q ss_pred --------cccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCC
Q psy9327 50 --------HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL 121 (641)
Q Consensus 50 --------h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~ 121 (641)
++..-..|+|..||.+||+++-. ...+.-..|+||+-+ |....+-+.-.
T Consensus 200 ~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~----------------------~~~~~~R~iRVy~Re-G~L~stSE~v~ 256 (928)
T PF04762_consen 200 KVDEGKLSWDDGRVRISWRGDGEYFAVSSVE----------------------PETGSRRVIRVYSRE-GELQSTSEPVD 256 (928)
T ss_pred ccccCccccCCCceEEEECCCCcEEEEEEEE----------------------cCCCceeEEEEECCC-ceEEeccccCC
Confidence 22234568899999999988610 000024689999955 77666655445
Q ss_pred CCeEEEEEccCCCEEEEEeC---CCeEEEEECCCCeeEEEE--c--cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 122 DYIRTTFFHHEYPWILSASD---DQTIRIWYWQSRNCICVL--T--GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 122 ~~V~~v~fsp~~~~l~sgs~---Dg~I~vWd~~~~~~i~~l--~--~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
+--.+++|-|.|++|++.-. ...|.+|. ++|.....| . .....|..+.|++++..|+..-.|. |.+|-..+
T Consensus 257 gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~N 334 (928)
T PF04762_consen 257 GLEGALSWRPSGNLIASSQRLPDRHDVVFFE-RNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSN 334 (928)
T ss_pred CccCCccCCCCCCEEEEEEEcCCCcEEEEEe-cCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeC
Confidence 55567899999999998764 45677776 444433333 2 3456799999999999999877664 99999887
Q ss_pred Ccee--eecc--CCCceeeecccCCC--------------c--eeeeeeeeee-----CCCeeEEEecCCCcce------
Q psy9327 195 LRKK--NVAP--GMGKLVLSMKSKHP--------------I--WKYCKPVKYC-----NPKHTLHICNRKMEPL------ 243 (641)
Q Consensus 195 ~~~~--~~~~--~~~~~v~s~~~~~~--------------v--~~~~~~l~s~-----~~d~~I~i~d~~~~~~------ 243 (641)
.+-- +.+. ...... . ..+|| + ....+.+..+ ...+.+.+-|.....+
T Consensus 335 YHWYLKqei~~~~~~~~~-~-~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a 412 (928)
T PF04762_consen 335 YHWYLKQEIRFSSSESVN-F-VKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRA 412 (928)
T ss_pred CEEEEEEEEEccCCCCCC-c-eEECCCCCCEEEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEeccccc
Confidence 6531 2221 110000 0 11111 1 1111111111 1244566666432221
Q ss_pred --------eeecCCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 244 --------CNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 244 --------~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
..+.-..+|.+++|++++..+++-..++.+.++.
T Consensus 413 ~VPPPMs~~~l~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~ 454 (928)
T PF04762_consen 413 VVPPPMSSYELELPSPVNDVAFSPSNSRFAVLTSDGSLSIYE 454 (928)
T ss_pred CCCchHhceEEcCCCCcEEEEEeCCCCeEEEEECCCCEEEEE
Confidence 2233467899999999987777777777776665
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.39 E-value=8.3e-05 Score=78.39 Aligned_cols=254 Identities=13% Similarity=0.127 Sum_probs=149.7
Q ss_pred CCeEEEEEccCCCeEEEEeCCC---------------cEEEEECccCcccccccccccC--eE-EEEEeCCCCEEE--Ee
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNG---------------VIQLWDYRMNTLLEKFDEHEGP--VR-GICFHNQQPIFV--SG 69 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg---------------~I~iWD~~~~~~l~~~~~h~~~--V~-~i~fsp~~~~l~--sg 69 (641)
..|.-+.|||.+++|.+=+..+ .+.+||..+|..+..|.....+ .. -+.|+-+..+++ ++
T Consensus 72 ~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~ 151 (561)
T COG5354 72 PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVG 151 (561)
T ss_pred CCceecccCcccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhcc
Confidence 4588999999999999865543 4899999999999988766555 33 467777766543 33
Q ss_pred ceeeEEeeec-------------eeeecccCCc--cee--eEE--EeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEc
Q psy9327 70 GKMIVMAYQG-------------CILESRNEPC--LFR--IKS--VLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 130 (641)
Q Consensus 70 s~~~~~~~~~-------------~~~~~~~~~~--~~~--~~~--~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fs 130 (641)
.+..+....+ .+......|. ... +.. ..+.++++++|.+..++.+.+-.-..-.=..+.|+
T Consensus 152 ~sl~i~e~t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~ 231 (561)
T COG5354 152 SSLYIHEITDNIEEHPFKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQ 231 (561)
T ss_pred CeEEEEecCCccccCchhhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEe
Confidence 3211111111 1111111111 111 111 33567788888887666554432222222357888
Q ss_pred cCCCEEEEEeC-----------CCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEE--EeCCCeEEEEecCCCce
Q psy9327 131 HEYPWILSASD-----------DQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS--ASLDQTIRVWDISGLRK 197 (641)
Q Consensus 131 p~~~~l~sgs~-----------Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvS--gs~DgtI~IWD~~~~~~ 197 (641)
+.|.+++.--. ...+++++++.+.+ ....+-.++|...+|.|.++.+++ |-.+.++.++|+++. .
T Consensus 232 ~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i-~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l 309 (561)
T COG5354 232 VLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSI-PVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-L 309 (561)
T ss_pred cCCceEEEEEEEeeecccceeccceEEEEeeccccc-ceeccccccceeeeecccCCceeEEecccccceeecccccc-e
Confidence 88886654221 24578888875443 333366899999999998876554 457889999999875 3
Q ss_pred eeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceee-ecCCcceEEEEEcCCccEEEEec
Q psy9327 198 KNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCN-IHENTRVKSGAWDESGVFIYTTS 268 (641)
Q Consensus 198 ~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~-~~~~~~I~sla~~p~g~~L~t~s 268 (641)
...++...+.- ..+.|...+..--..+...+.+.+||..+.-... -.......-+.|+|+|.++.+..
T Consensus 310 ~~~~Pe~~rNT---~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~~n~s~~~wspd~qF~~~~~ 378 (561)
T COG5354 310 RFYFPEQKRNT---IFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNGLNTSYCDWSPDGQFYDTDT 378 (561)
T ss_pred EEecCCccccc---ccccCcccEEEEecCCccccceEEeccCCceEEEEEeecCCceEeeccCCceEEEecC
Confidence 33333221111 1112222222112245577889999954433322 22344455578999999988765
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.37 E-value=0.0003 Score=71.71 Aligned_cols=155 Identities=11% Similarity=0.166 Sum_probs=107.8
Q ss_pred CeEEEEEccCCCeEEEEeC-CCcEEEEECcc-Ccccc--cccccccC----------eEEEEEeCCCCEEEEeceeeEEe
Q psy9327 11 RVKGLSFHPKRPWILSSLH-NGVIQLWDYRM-NTLLE--KFDEHEGP----------VRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~-dg~I~iWD~~~-~~~l~--~~~~h~~~----------V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
+-+.++++++|++|+++.. .|.|.++-++. |.+.. ....|.++ +....|.|+++++++.+
T Consensus 90 ~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~D------ 163 (346)
T COG2706 90 PPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPD------ 163 (346)
T ss_pred CCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEee------
Confidence 3378999999999988875 68999999865 43322 22245555 89999999999999987
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc---cCCCCeEEEEEccCCCEEEEEe-CCCeEEEEECCC
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL---GHLDYIRTTFFHHEYPWILSAS-DDQTIRIWYWQS 152 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~---~h~~~V~~v~fsp~~~~l~sgs-~Dg~I~vWd~~~ 152 (641)
..--+|.+|++..|+....-. .-...-+.+.|||++++....+ -+++|-+|.+..
T Consensus 164 ---------------------LG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~ 222 (346)
T COG2706 164 ---------------------LGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNP 222 (346)
T ss_pred ---------------------cCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcC
Confidence 355589999999876432211 2334678999999999876655 489999999887
Q ss_pred C--e--eEEEEc----c--CCCCEEEEEEecCCCEEEEEeC-CCeEEEEec
Q psy9327 153 R--N--CICVLT----G--HNHYVMCAQFHPTDDIVVSASL-DQTIRVWDI 192 (641)
Q Consensus 153 ~--~--~i~~l~----~--h~~~V~sl~fsp~g~~lvSgs~-DgtI~IWD~ 192 (641)
. + +++++. . -......+..+|+|++|..+.. ...|.+|.+
T Consensus 223 ~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V 273 (346)
T COG2706 223 AVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSV 273 (346)
T ss_pred CCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEE
Confidence 3 2 222221 1 1234567888999999887654 224555544
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.1e-05 Score=90.03 Aligned_cols=178 Identities=8% Similarity=0.018 Sum_probs=128.0
Q ss_pred eeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEE
Q psy9327 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQF 171 (641)
Q Consensus 92 ~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~f 171 (641)
.....|+....+..+|+++.+......-..+.|.-++- +++++.+|...|+|.+-|.++.+.++++.+|.+.|..+..
T Consensus 148 ~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv 225 (1118)
T KOG1275|consen 148 STLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDV 225 (1118)
T ss_pred cceeecchhhheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcCceeeeeeccccceeeeec
Confidence 34445566677888999988877776655555655543 5788999999999999999999999999999999976554
Q ss_pred ecCCCEEEEEeC---------CCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-----
Q psy9327 172 HPTDDIVVSASL---------DQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN----- 237 (641)
Q Consensus 172 sp~g~~lvSgs~---------DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d----- 237 (641)
.|++|++++. |..|+|||+++.+.+.-++-+-.+ .+..+||..... ++.++..|...+.|
T Consensus 226 --~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P--~flrf~Psl~t~--~~V~S~sGq~q~vd~~~ls 299 (1118)
T KOG1275|consen 226 --QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP--QFLRFHPSLTTR--LAVTSQSGQFQFVDTATLS 299 (1118)
T ss_pred --cCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCc--hhhhhcccccce--EEEEecccceeeccccccC
Confidence 6999999876 677999999997766554322111 224455543322 34444555666655
Q ss_pred CCCcceeeecC-CcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 238 RKMEPLCNIHE-NTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 238 ~~~~~~~~~~~-~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
........++. +..+.+..++++|..++.|..+|.+.+|.
T Consensus 300 NP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 300 NPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred CCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 11122333344 55599999999999999999999999997
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.2e-05 Score=88.57 Aligned_cols=109 Identities=12% Similarity=0.238 Sum_probs=89.4
Q ss_pred EEEEEccCCCeEEEEeC----CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 13 KGLSFHPKRPWILSSLH----NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 13 ~~l~fspdg~~Lasg~~----dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
+-.+|||..+++++++. .|.|.||- ++|++-+.. ...-.+++++|||..-.|++|-
T Consensus 19 ti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~V-t~P~hatSLCWHpe~~vLa~gw------------------ 78 (1416)
T KOG3617|consen 19 TISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDV-TYPVHATSLCWHPEEFVLAQGW------------------ 78 (1416)
T ss_pred cccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCccc-ccceehhhhccChHHHHHhhcc------------------
Confidence 34579999999998875 58898885 667654332 2233566799999998889987
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~ 151 (641)
.-|.+.+|...+.+.-.....|..++..+.|||+|..++++..-|.|.+|.+.
T Consensus 79 ----------e~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 79 ----------EMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred ----------ccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 88999999988777666667799999999999999999999999999999876
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=98.33 E-value=4.8e-05 Score=83.55 Aligned_cols=164 Identities=10% Similarity=0.084 Sum_probs=121.9
Q ss_pred eEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcce
Q psy9327 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLF 91 (641)
Q Consensus 12 V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~ 91 (641)
-.++.|+|.| ++|-|++ ..|.+-|..+-+.+..++-|...|+.+.|.|-.....-++ .+...
T Consensus 18 ~~A~Dw~~~G-LiAygsh-slV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS----------------~~~~~ 79 (1062)
T KOG1912|consen 18 RNAADWSPSG-LIAYGSH-SLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLS----------------PSSSQ 79 (1062)
T ss_pred ccccccCccc-eEEEecC-ceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccC----------------ccccc
Confidence 5678899988 5677766 4688999999999999999999999999986322111111 00011
Q ss_pred eeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccC---C-CEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEE
Q psy9327 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE---Y-PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVM 167 (641)
Q Consensus 92 ~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~---~-~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~ 167 (641)
...+++-..|.|.+||...+..+..+..|.+++..++|-+. . ..++.-....++.+||..+|+.............
T Consensus 80 lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs 159 (1062)
T KOG1912|consen 80 LLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILS 159 (1062)
T ss_pred eeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCccee
Confidence 11222238999999999999999999999999999999873 2 3666667778999999999998877766666777
Q ss_pred EEEEec-CCCEEEEEeCCCeEEEEecC
Q psy9327 168 CAQFHP-TDDIVVSASLDQTIRVWDIS 193 (641)
Q Consensus 168 sl~fsp-~g~~lvSgs~DgtI~IWD~~ 193 (641)
|+.+.| |.+.+..-+..|.+.+-+..
T Consensus 160 ~f~~DPfd~rh~~~l~s~g~vl~~~~l 186 (1062)
T KOG1912|consen 160 CFRVDPFDSRHFCVLGSKGFVLSCKDL 186 (1062)
T ss_pred eeeeCCCCcceEEEEccCceEEEEecc
Confidence 888988 55666666667777777654
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.3e-06 Score=84.57 Aligned_cols=163 Identities=18% Similarity=0.383 Sum_probs=110.8
Q ss_pred CCeEEEEEccCCC--eEEEEeCCCcEEEEECccCc-------------------ccc--------c--------------
Q psy9327 10 ARVKGLSFHPKRP--WILSSLHNGVIQLWDYRMNT-------------------LLE--------K-------------- 46 (641)
Q Consensus 10 ~~V~~l~fspdg~--~Lasg~~dg~I~iWD~~~~~-------------------~l~--------~-------------- 46 (641)
..|..+.|-.++. .++.++.|.+|++|.+.... .+. +
T Consensus 86 EKin~I~w~~~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~r 165 (460)
T COG5170 86 EKINAIEWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCR 165 (460)
T ss_pred HHhhheeeecCCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccce
Confidence 4578888876543 56777789999999874321 000 0
Q ss_pred -c-cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee---EEEEccCC
Q psy9327 47 -F-DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC---IFTLLGHL 121 (641)
Q Consensus 47 -~-~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~---~~~~~~h~ 121 (641)
+ ..|.-.+.+++|..|...++++ +|-.|.+|++.--.. +.-++.|.
T Consensus 166 vyaNaH~yhiNSiS~NsD~et~lSa-----------------------------DdLrINLWnl~i~D~sFnIVDiKP~n 216 (460)
T COG5170 166 VYANAHPYHINSISFNSDKETLLSA-----------------------------DDLRINLWNLEIIDGSFNIVDIKPHN 216 (460)
T ss_pred eccccceeEeeeeeecCchheeeec-----------------------------cceeeeeccccccCCceEEEeccCcc
Confidence 1 2355567788888888888887 688999999864322 22234443
Q ss_pred -----CCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCe-e-----EE----------EEccCCCCEEEEEEecCCCEEE
Q psy9327 122 -----DYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRN-C-----IC----------VLTGHNHYVMCAQFHPTDDIVV 179 (641)
Q Consensus 122 -----~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~-~-----i~----------~l~~h~~~V~sl~fsp~g~~lv 179 (641)
..|++..|||... .|.-.+..|.|++-|++... | +. -+.+-...|..+.|+++|++++
T Consensus 217 meeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIl 296 (460)
T COG5170 217 MEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYIL 296 (460)
T ss_pred HHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEE
Confidence 4588899999654 66677889999999998432 1 11 1123345688899999999999
Q ss_pred EEeCCCeEEEEecCCCc-eeeecc
Q psy9327 180 SASLDQTIRVWDISGLR-KKNVAP 202 (641)
Q Consensus 180 Sgs~DgtI~IWD~~~~~-~~~~~~ 202 (641)
+-+.- +++|||.+..+ ++.+.+
T Consensus 297 sRdyl-tvkiwDvnm~k~pikTi~ 319 (460)
T COG5170 297 SRDYL-TVKIWDVNMAKNPIKTIP 319 (460)
T ss_pred Eeccc-eEEEEecccccCCceeec
Confidence 87664 99999998643 334443
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=98.24 E-value=7.5e-05 Score=79.32 Aligned_cols=227 Identities=13% Similarity=0.216 Sum_probs=122.9
Q ss_pred CeEEEEEccCCCeEEEEeCC-----------CcEEEEECccCcccccccccccC---eEEEEEeCCCCEEEEeceeeEEe
Q psy9327 11 RVKGLSFHPKRPWILSSLHN-----------GVIQLWDYRMNTLLEKFDEHEGP---VRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~d-----------g~I~iWD~~~~~~l~~~~~h~~~---V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
.|.-+.|||..+||++=+.. ..+.|||+.+|...+.|....++ -.-..||-|+.++|.-.
T Consensus 251 ~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~------ 324 (698)
T KOG2314|consen 251 GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMT------ 324 (698)
T ss_pred CceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEec------
Confidence 38889999999999987541 56899999999998888653221 12357999999998765
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccC------------------------
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE------------------------ 132 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~------------------------ 132 (641)
-.+|.|++..+..++..-.-.-..|+...|+|.
T Consensus 325 -----------------------~~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evP 381 (698)
T KOG2314|consen 325 -----------------------GNSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVP 381 (698)
T ss_pred -----------------------cceEEEEecCceeeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecC
Confidence 133444443332221111112223333344443
Q ss_pred -----------------------CCEEEEEeC----------CCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEE
Q psy9327 133 -----------------------YPWILSASD----------DQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVV 179 (641)
Q Consensus 133 -----------------------~~~l~sgs~----------Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lv 179 (641)
|.+|+.--+ -..+-|+.++.+..--.--.-...|...+|-|.|+.++
T Consensus 382 s~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velke~vi~FaWEP~gdkF~ 461 (698)
T KOG2314|consen 382 SKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELKESVIAFAWEPHGDKFA 461 (698)
T ss_pred ccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecchheeeeeeccCCCeEE
Confidence 444432211 01122222222211000112345677889999998766
Q ss_pred EEeC---CCeEEEEecCC-CceeeeccCCCceeeecccCCCceeeeee----eeeeCCCeeEEEecCCCcce--eeecCC
Q psy9327 180 SASL---DQTIRVWDISG-LRKKNVAPGMGKLVLSMKSKHPIWKYCKP----VKYCNPKHTLHICNRKMEPL--CNIHEN 249 (641)
Q Consensus 180 Sgs~---DgtI~IWD~~~-~~~~~~~~~~~~~v~s~~~~~~v~~~~~~----l~s~~~d~~I~i~d~~~~~~--~~~~~~ 249 (641)
+-+. ..++.+|-+.+ ...........+. .+.+-.|...+. .+-++..+.+.++|.....+ ....+.
T Consensus 462 vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk~----~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh 537 (698)
T KOG2314|consen 462 VISGNTVKNTVSFYAVETNIKKPSLVKELDKK----FANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEH 537 (698)
T ss_pred EEEccccccceeEEEeecCCCchhhhhhhccc----ccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCccc
Confidence 5443 35788887763 2221111111110 111111221111 22234788899999664222 222335
Q ss_pred cceEEEEEcCCccEEEEecCC
Q psy9327 250 TRVKSGAWDESGVFIYTTSNH 270 (641)
Q Consensus 250 ~~I~sla~~p~g~~L~t~s~~ 270 (641)
...+.+.|||.|+++.|++.-
T Consensus 538 ~~at~veWDPtGRYvvT~ss~ 558 (698)
T KOG2314|consen 538 FAATEVEWDPTGRYVVTSSSS 558 (698)
T ss_pred cccccceECCCCCEEEEeeeh
Confidence 667789999999999998853
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.23 E-value=3.5e-06 Score=81.52 Aligned_cols=106 Identities=20% Similarity=0.228 Sum_probs=74.1
Q ss_pred CCCeEEEEeC-----CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeE
Q psy9327 20 KRPWILSSLH-----NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIK 94 (641)
Q Consensus 20 dg~~Lasg~~-----dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~ 94 (641)
.++.+.+++. -+..++|+++..+.+..-..-...|.+++-||....++.++
T Consensus 143 ~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cg------------------------ 198 (319)
T KOG4714|consen 143 HGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCG------------------------ 198 (319)
T ss_pred cccEEecCCcceEeeccceeeecccccccccccccccccchhhhCCcccccEEEEe------------------------
Confidence 4555554432 13456666654433222112223499999999766655554
Q ss_pred EEeeCCCeEEEEECCCCe-eEEEEccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEECCC
Q psy9327 95 SVLGDDYKIKVWNYKQRK-CIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQS 152 (641)
Q Consensus 95 ~~~s~Dg~I~vWD~~t~~-~~~~~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~I~vWd~~~ 152 (641)
+.||.+.+||.+... +...+..|..++..+-|||.. ..|++++.||.+.-||-.+
T Consensus 199 ---t~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 199 ---TDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred ---cCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 499999999999874 344567899999999999965 4899999999999999763
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.2e-05 Score=83.27 Aligned_cols=173 Identities=9% Similarity=0.012 Sum_probs=128.2
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeC-CCcEEEEECccCcccccccccccCeEEEEEe-CCC---CEEEEeceeeEEe
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLH-NGVIQLWDYRMNTLLEKFDEHEGPVRGICFH-NQQ---PIFVSGGKMIVMA 76 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~-dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fs-p~~---~~l~sgs~~~~~~ 76 (641)
+..|..|-+.|.+++.+-+|-++.|.+. |..++++|+.+-.++..++.-.-| ..+.|. ..| ..++++.
T Consensus 46 VKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lP-g~a~wv~skGd~~s~IAVs~------ 118 (558)
T KOG0882|consen 46 VKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLP-GFAEWVTSKGDKISLIAVSL------ 118 (558)
T ss_pred hhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccccCC-CceEEecCCCCeeeeEEeec------
Confidence 4567788889999999999999999777 999999999876665444322222 122232 222 1444444
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe-eEEEE-ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCC--
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK-CIFTL-LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS-- 152 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~-~~~~~-~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~-- 152 (641)
-.++.|.|+|-...- ....+ .-|..+|..+...+.+..++|....|.|.-|....
T Consensus 119 ---------------------~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~ 177 (558)
T KOG0882|consen 119 ---------------------FKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPF 177 (558)
T ss_pred ---------------------ccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcc
Confidence 288999999976543 33333 34999999999999999999999999999998762
Q ss_pred ----CeeEE---------EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 153 ----RNCIC---------VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 153 ----~~~i~---------~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
.+... .+........++.|+|++..+.+-+.|.+||+++..+++..+.+.
T Consensus 178 qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiD 240 (558)
T KOG0882|consen 178 QFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEID 240 (558)
T ss_pred cCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhh
Confidence 11111 122345668899999999999999999999999999998877764
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.22 E-value=4.1e-05 Score=74.62 Aligned_cols=156 Identities=10% Similarity=0.029 Sum_probs=114.0
Q ss_pred eEEEEEccCCCeEEEEeCCCcEEEEECcc-Cccccc-c-cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRM-NTLLEK-F-DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 12 V~~l~fspdg~~Lasg~~dg~I~iWD~~~-~~~l~~-~-~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
+.++++++|+.++++.+....|-.|.++. ++.+.+ . ...+..=.+..|+.....+|++.
T Consensus 161 ~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~------------------ 222 (344)
T KOG4532|consen 161 QNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVF------------------ 222 (344)
T ss_pred eeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEe------------------
Confidence 88999999999999999999999998864 332222 2 23344557789999999999997
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeE-E----EEccCCCCeEEEEEccCCC--EEEEEeCCCeEEEEECCCCeeEEEEc-
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCI-F----TLLGHLDYIRTTFFHHEYP--WILSASDDQTIRIWYWQSRNCICVLT- 160 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~-~----~~~~h~~~V~~v~fsp~~~--~l~sgs~Dg~I~vWd~~~~~~i~~l~- 160 (641)
.||++.|||++..... . +-..|.+.++.+.|++.|+ +|+-.-.-+.+.+-|+++.+....+.
T Consensus 223 ----------Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i 292 (344)
T KOG4532|consen 223 ----------QDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVI 292 (344)
T ss_pred ----------cCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEec
Confidence 9999999999864322 2 2235899999999999765 45544455788999999876544332
Q ss_pred ------cCCCC-EEEEEEecCCCEEEEEeCCCeEEEEecCCCc
Q psy9327 161 ------GHNHY-VMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196 (641)
Q Consensus 161 ------~h~~~-V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~ 196 (641)
.|... |....|+.++.-+.+.+.+ .+.-|++.+..
T Consensus 293 ~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~-~~ae~ni~srs 334 (344)
T KOG4532|consen 293 PDDVERKHNTQHIFGTNFNNENESNDVKNEL-QGAEYNILSRS 334 (344)
T ss_pred CccccccccccccccccccCCCcccccccch-hhheeeccccc
Confidence 34333 8888898888877777766 45567665533
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=0.00079 Score=73.27 Aligned_cols=138 Identities=12% Similarity=-0.001 Sum_probs=85.9
Q ss_pred CcEEEEECccCcccccccccccCeEEEEEeCCCCE-EEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC
Q psy9327 31 GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI-FVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK 109 (641)
Q Consensus 31 g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~-l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~ 109 (641)
..|.+-|.+... .+.+... +....-.|+|+|.. ++..+. .+.+..|.++|+.
T Consensus 169 ~~l~~~d~dg~~-~~~~~~~-~~~~~p~wSpDG~~~i~y~s~-------------------------~~~~~~Iyv~dl~ 221 (419)
T PRK04043 169 SNIVLADYTLTY-QKVIVKG-GLNIFPKWANKEQTAFYYTSY-------------------------GERKPTLYKYNLY 221 (419)
T ss_pred ceEEEECCCCCc-eeEEccC-CCeEeEEECCCCCcEEEEEEc-------------------------cCCCCEEEEEECC
Confidence 355555554332 2323223 37788999999985 554331 0124679999999
Q ss_pred CCeeEEEEccCCCCeEEEEEccCCCEEEE-EeC--CCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeC-CC
Q psy9327 110 QRKCIFTLLGHLDYIRTTFFHHEYPWILS-ASD--DQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL-DQ 185 (641)
Q Consensus 110 t~~~~~~~~~h~~~V~~v~fsp~~~~l~s-gs~--Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~-Dg 185 (641)
+++...... ..+......|+|||..++. .+. +..|.++|+.++.. ..+..+........|+|||+.|+-.+. .+
T Consensus 222 tg~~~~lt~-~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~-~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g 299 (419)
T PRK04043 222 TGKKEKIAS-SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTL-TQITNYPGIDVNGNFVEDDKRIVFVSDRLG 299 (419)
T ss_pred CCcEEEEec-CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcE-EEcccCCCccCccEECCCCCEEEEEECCCC
Confidence 887544333 5566677889999986654 333 45788889887763 445444443445689999987766654 23
Q ss_pred --eEEEEecCCCce
Q psy9327 186 --TIRVWDISGLRK 197 (641)
Q Consensus 186 --tI~IWD~~~~~~ 197 (641)
.|.+.|+.+++.
T Consensus 300 ~~~Iy~~dl~~g~~ 313 (419)
T PRK04043 300 YPNIFMKKLNSGSV 313 (419)
T ss_pred CceEEEEECCCCCe
Confidence 455566655443
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.21 E-value=0.0019 Score=65.83 Aligned_cols=236 Identities=11% Similarity=0.077 Sum_probs=150.5
Q ss_pred CCeEEEEEcc-CCCeEEEEeCCCc-EEEEECccCcccccccccccCeE--EEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 10 ARVKGLSFHP-KRPWILSSLHNGV-IQLWDYRMNTLLEKFDEHEGPVR--GICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 10 ~~V~~l~fsp-dg~~Lasg~~dg~-I~iWD~~~~~~l~~~~~h~~~V~--~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
.+..+++.+| ++..++.+-.-|+ ..+||.++++....+....+.-. .-.||+||.+|.+.-..
T Consensus 5 ~RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd------------- 71 (305)
T PF07433_consen 5 ARGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTEND------------- 71 (305)
T ss_pred ccccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccc-------------
Confidence 4566889999 5556777777665 68999999988877655443322 36899999999998410
Q ss_pred cCCcceeeEEEeeCCCeEEEEECC-CCeeEEEEccCCCCeEEEEEccCCCEEEEEe------------------CCCeEE
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYK-QRKCIFTLLGHLDYIRTTFFHHEYPWILSAS------------------DDQTIR 146 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~-t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs------------------~Dg~I~ 146 (641)
..+..|.|-|||.. +-+.+..|..|--.-..+.+.|+++.|+.+. ++-.+.
T Consensus 72 ----------~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~ 141 (305)
T PF07433_consen 72 ----------YETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLV 141 (305)
T ss_pred ----------cCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceE
Confidence 01256899999999 5677888888776677889999998777763 233455
Q ss_pred EEECCCCeeEEE--E--ccCCCCEEEEEEecCCCEEEEEeCCCe-------EEEEecCCCceeeecc-------CCCcee
Q psy9327 147 IWYWQSRNCICV--L--TGHNHYVMCAQFHPTDDIVVSASLDQT-------IRVWDISGLRKKNVAP-------GMGKLV 208 (641)
Q Consensus 147 vWd~~~~~~i~~--l--~~h~~~V~sl~fsp~g~~lvSgs~Dgt-------I~IWD~~~~~~~~~~~-------~~~~~v 208 (641)
.-|..+++.+.. + .-|.-.|+.+++.++|..++..-..|- +-+++-.. ....+. ....|+
T Consensus 142 ~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~--~~~~~~~p~~~~~~l~~Y~ 219 (305)
T PF07433_consen 142 YLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGG--ALRLLPAPEEQWRRLNGYI 219 (305)
T ss_pred EEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCC--cceeccCChHHHHhhCCce
Confidence 667778887766 4 347778999999999876665544332 33333222 111111 223454
Q ss_pred eecccCCC--ceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 209 LSMKSKHP--IWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 209 ~s~~~~~~--v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
-|+..... .+ .+++...+.+.+||.....+.....-..+..++-.+++ ++++. ..|.+....
T Consensus 220 gSIa~~~~g~~i-----a~tsPrGg~~~~~d~~tg~~~~~~~l~D~cGva~~~~~-f~~ss-G~G~~~~~~ 283 (305)
T PF07433_consen 220 GSIAADRDGRLI-----AVTSPRGGRVAVWDAATGRLLGSVPLPDACGVAPTDDG-FLVSS-GQGQLIRLS 283 (305)
T ss_pred EEEEEeCCCCEE-----EEECCCCCEEEEEECCCCCEeeccccCceeeeeecCCc-eEEeC-CCccEEEcc
Confidence 44332211 11 34556788999998655555454555566667777776 55553 334444333
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.21 E-value=7.4e-05 Score=72.83 Aligned_cols=149 Identities=12% Similarity=0.001 Sum_probs=107.5
Q ss_pred eEEEEeCCCcEEEEECccCcccccccccccC--eEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCC
Q psy9327 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGP--VRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDD 100 (641)
Q Consensus 23 ~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~--V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~D 100 (641)
-+..++.|.++++.+++.+.. ++..|... +.+++.+++++|+++.+ +.
T Consensus 130 ~~~i~sndht~k~~~~~~~s~--~~~~h~~~~~~ns~~~snd~~~~~~Vg----------------------------ds 179 (344)
T KOG4532|consen 130 PLNIASNDHTGKTMVVSGDSN--KFAVHNQNLTQNSLHYSNDPSWGSSVG----------------------------DS 179 (344)
T ss_pred ceeeccCCcceeEEEEecCcc--cceeeccccceeeeEEcCCCceEEEec----------------------------CC
Confidence 355667788888888764432 23345443 88999999999999998 78
Q ss_pred CeEEEEECCCC-e-eEE-EEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeE-----EEEccCCCCEEEEEEe
Q psy9327 101 YKIKVWNYKQR-K-CIF-TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI-----CVLTGHNHYVMCAQFH 172 (641)
Q Consensus 101 g~I~vWD~~t~-~-~~~-~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i-----~~l~~h~~~V~sl~fs 172 (641)
..|-.|.+... . .+. ....-++.=.+..|+.....||+++.||++.|||++..... .+-..|++.++.+.|+
T Consensus 180 ~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fs 259 (344)
T KOG4532|consen 180 RRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFS 259 (344)
T ss_pred CcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEec
Confidence 88888887653 2 223 22334455567899999999999999999999999875422 2224689999999999
Q ss_pred cCCC--EEEEEeCCCeEEEEecCCCceeeec
Q psy9327 173 PTDD--IVVSASLDQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 173 p~g~--~lvSgs~DgtI~IWD~~~~~~~~~~ 201 (641)
|.|. +|+-.-.=+.+.+-|+++++..+.+
T Consensus 260 l~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I 290 (344)
T KOG4532|consen 260 LYGLLDLLFISEHFSRVHVVDTRNYVNHQVI 290 (344)
T ss_pred CCCcceEEEEecCcceEEEEEcccCceeeEE
Confidence 9763 5555555678999999987654443
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.20 E-value=0.0011 Score=65.86 Aligned_cols=140 Identities=11% Similarity=0.173 Sum_probs=89.1
Q ss_pred EEEccCCCeEEEEeCCCcEEEEECccC--ccccccc---ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 15 LSFHPKRPWILSSLHNGVIQLWDYRMN--TLLEKFD---EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 15 l~fspdg~~Lasg~~dg~I~iWD~~~~--~~l~~~~---~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
++.+++|++||.- .|..|.|=..+.. ..+.+.+ .....=+.++||||+.+||.+.
T Consensus 3 ~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~------------------- 62 (282)
T PF15492_consen 3 LALSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAE------------------- 62 (282)
T ss_pred eeecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEc-------------------
Confidence 5677889877665 4566766554321 1222222 2333457899999999999998
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEcc-------CCCCeEEEEEccCC---C---EEEEEeCCCeEEEEECCC----
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLG-------HLDYIRTTFFHHEY---P---WILSASDDQTIRIWYWQS---- 152 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~-------h~~~V~~v~fsp~~---~---~l~sgs~Dg~I~vWd~~~---- 152 (641)
..|+|+++|+.. ..++.+.. -...|.++.|.+.. + .|+.-.-+|.++=|-+..
T Consensus 63 ---------S~G~i~vfdl~g-~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q 132 (282)
T PF15492_consen 63 ---------STGTIRVFDLMG-SELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQ 132 (282)
T ss_pred ---------CCCeEEEEeccc-ceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCC
Confidence 899999999874 44555443 13467788886532 1 344555566666665422
Q ss_pred -CeeEEEE--c-cCCCCEEEEEEecCCCEEEEEeCC
Q psy9327 153 -RNCICVL--T-GHNHYVMCAQFHPTDDIVVSASLD 184 (641)
Q Consensus 153 -~~~i~~l--~-~h~~~V~sl~fsp~g~~lvSgs~D 184 (641)
.+..+++ . .+...|.++.++|..++|+.|+..
T Consensus 133 ~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~ 168 (282)
T PF15492_consen 133 GYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCE 168 (282)
T ss_pred cceeeEEEEecccCCCceeEEEEcCCCCEEEEeccC
Confidence 2233333 2 246789999999998888777653
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.00014 Score=79.55 Aligned_cols=117 Identities=10% Similarity=0.070 Sum_probs=90.4
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccc-ccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeeccc
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK-FDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRN 86 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~-~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~ 86 (641)
|...|+--+++..+++++.|+..|.+.+|+-..+++... ..+..+.+..+..|++..++|.|+
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt---------------- 95 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGT---------------- 95 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhc----------------
Confidence 445677677888899999999999999999766654332 223556666677788887888876
Q ss_pred CCcceeeEEEeeCCCeEEEEECCCCeeE-----EEE-ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCC
Q psy9327 87 EPCLFRIKSVLGDDYKIKVWNYKQRKCI-----FTL-LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152 (641)
Q Consensus 87 ~~~~~~~~~~~s~Dg~I~vWD~~t~~~~-----~~~-~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~ 152 (641)
..|.|.|+-++.+.+- ..+ ..|...|++++|++++..+.+|...|+|..-.+.+
T Consensus 96 ------------~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 96 ------------ASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred ------------CCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 8999999988764321 111 23778999999999999999999999999988877
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.002 Score=62.95 Aligned_cols=138 Identities=11% Similarity=0.037 Sum_probs=93.7
Q ss_pred CCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCC
Q psy9327 21 RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDD 100 (641)
Q Consensus 21 g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~D 100 (641)
..+++.|++.|.+.--|..+|++...- .-..++.+-+.- -|.+++.|. ..
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~-ilg~RiE~sa~v-vgdfVV~GC----------------------------y~ 72 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEA-ILGVRIECSAIV-VGDFVVLGC----------------------------YS 72 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeeh-hhCceeeeeeEE-ECCEEEEEE----------------------------cc
Confidence 457889999999999999999876543 123344333322 355677777 89
Q ss_pred CeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEE
Q psy9327 101 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvS 180 (641)
|.+.+.+.++|.....|..-..-=......+++.++..|+.|++.+.-|.++..|+...+-..+...+-+..|-...|..
T Consensus 73 g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~ 152 (354)
T KOG4649|consen 73 GGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYA 152 (354)
T ss_pred CcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEE
Confidence 99999999999877777643222122345678899999999999999999999998887643333334444553333444
Q ss_pred EeCCCeEE
Q psy9327 181 ASLDQTIR 188 (641)
Q Consensus 181 gs~DgtI~ 188 (641)
++..|.+.
T Consensus 153 a~t~G~vl 160 (354)
T KOG4649|consen 153 AITAGAVL 160 (354)
T ss_pred EeccceEE
Confidence 44445443
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.00068 Score=71.24 Aligned_cols=185 Identities=10% Similarity=0.002 Sum_probs=117.6
Q ss_pred EEEEccCCCeEEEEe-C-CCcEEEEECccCcccccccccccCeEEEEE--------eCCCCEEEEec--eeeEEeeecee
Q psy9327 14 GLSFHPKRPWILSSL-H-NGVIQLWDYRMNTLLEKFDEHEGPVRGICF--------HNQQPIFVSGG--KMIVMAYQGCI 81 (641)
Q Consensus 14 ~l~fspdg~~Lasg~-~-dg~I~iWD~~~~~~l~~~~~h~~~V~~i~f--------sp~~~~l~sgs--~~~~~~~~~~~ 81 (641)
.+++||||++++... . +..|.+.|+.+++.+..+.-.. +..-... +.|+..+-... .+......-.+
T Consensus 109 ~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~-~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~v 187 (352)
T TIGR02658 109 MTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPD-CYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEV 187 (352)
T ss_pred eEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCC-CcEEEEecCCccEEEeecCceEEEEecCCCceEEeeeee
Confidence 789999999998776 4 7899999999999888775422 2222223 33333322111 00000001111
Q ss_pred ee-----cccCC-----cceeeEEEeeCCCeEEEEECCC-----CeeEEEEcc-------CCCCeEEEEEccCCCEEEEE
Q psy9327 82 LE-----SRNEP-----CLFRIKSVLGDDYKIKVWNYKQ-----RKCIFTLLG-------HLDYIRTTFFHHEYPWILSA 139 (641)
Q Consensus 82 ~~-----~~~~~-----~~~~~~~~~s~Dg~I~vWD~~t-----~~~~~~~~~-------h~~~V~~v~fsp~~~~l~sg 139 (641)
.. ....| +...+.+ +..|+|.+-|+.. .+....+.. ..+....++++++++.+..+
T Consensus 188 f~~~~~~v~~rP~~~~~dg~~~~v--s~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~ 265 (352)
T TIGR02658 188 FHPEDEYLINHPAYSNKSGRLVWP--TYTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLL 265 (352)
T ss_pred ecCCccccccCCceEcCCCcEEEE--ecCCeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEE
Confidence 00 11223 2222222 2339999999543 333333321 23344559999999877764
Q ss_pred e----------CCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCC-EEEEEe-CCCeEEEEecCCCceeeecc
Q psy9327 140 S----------DDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD-IVVSAS-LDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 140 s----------~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~-~lvSgs-~DgtI~IWD~~~~~~~~~~~ 202 (641)
. ..+.|.++|..+++.+..+.- ...+..++++||++ +|++.+ .++.|.+.|..+++.+....
T Consensus 266 ~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i~ 339 (352)
T TIGR02658 266 ADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSVN 339 (352)
T ss_pred ecCCccccccCCCCEEEEEECCCCeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeeec
Confidence 3 125799999999999988762 45788999999998 888766 58899999999998888774
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.15 E-value=3.4e-05 Score=76.41 Aligned_cols=157 Identities=20% Similarity=0.400 Sum_probs=108.1
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccC-----cccccccccc------------cCeEEEEEeCCC--CEEEEe
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-----TLLEKFDEHE------------GPVRGICFHNQQ--PIFVSG 69 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~-----~~l~~~~~h~------------~~V~~i~fsp~~--~~l~sg 69 (641)
.+.|+++.|...|.+|++|...|.|.++.-... +....|++|. ..|..|.|..++ ..++.+
T Consensus 26 ad~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLls 105 (460)
T COG5170 26 ADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLS 105 (460)
T ss_pred cceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEe
Confidence 467999999999999999999999999985432 2344466664 468888887543 244444
Q ss_pred ceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe-------------------eE----------------
Q psy9327 70 GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK-------------------CI---------------- 114 (641)
Q Consensus 70 s~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~-------------------~~---------------- 114 (641)
+ .|.+|++|.+.... ++
T Consensus 106 t----------------------------NdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~ 157 (460)
T COG5170 106 T----------------------------NDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDE 157 (460)
T ss_pred c----------------------------CCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccce
Confidence 3 89999999864320 00
Q ss_pred -------EEE-ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe---eEEEEccCC-----CCEEEEEEecCC-CE
Q psy9327 115 -------FTL-LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN---CICVLTGHN-----HYVMCAQFHPTD-DI 177 (641)
Q Consensus 115 -------~~~-~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~---~i~~l~~h~-----~~V~sl~fsp~g-~~ 177 (641)
+.+ ..|.--+.++.|..+...++|+ +|=.|.+|++.-.. .+-.++.|. ..|++..|||.. ..
T Consensus 158 iiaa~p~rvyaNaH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~ 236 (460)
T COG5170 158 IIAAKPCRVYANAHPYHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNV 236 (460)
T ss_pred EEEeccceeccccceeEeeeeeecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcce
Confidence 011 2355557788888888766665 57899999986432 233344453 458899999964 45
Q ss_pred EEEEeCCCeEEEEecCC
Q psy9327 178 VVSASLDQTIRVWDISG 194 (641)
Q Consensus 178 lvSgs~DgtI~IWD~~~ 194 (641)
+.-.+..|+|++-|++.
T Consensus 237 fmYSsSkG~Ikl~DlRq 253 (460)
T COG5170 237 FMYSSSKGEIKLNDLRQ 253 (460)
T ss_pred EEEecCCCcEEehhhhh
Confidence 55567789999999974
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=98.13 E-value=0.00027 Score=77.12 Aligned_cols=236 Identities=11% Similarity=0.168 Sum_probs=150.7
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccc--cccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF--DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~--~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
=++++||++.|.-+.|+.+.+.|-++..+|.|.+|=+-.|.-.... ....+-|.+++|..+|..+...-
T Consensus 64 NQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvY--------- 134 (1189)
T KOG2041|consen 64 NQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVY--------- 134 (1189)
T ss_pred hhhhccCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEE---------
Confidence 3679999999999999999999999999999999998877654433 23567899999999999988886
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEE-EEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC-----
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIF-TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR----- 153 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~-~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~----- 153 (641)
.||.|.|=.++..+.-. .+++ .-...+.|++|...++.+-..|.+.++|-+..
T Consensus 135 -------------------eDGavIVGsvdGNRIwgKeLkg--~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl 193 (1189)
T KOG2041|consen 135 -------------------EDGAVIVGSVDGNRIWGKELKG--QLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKL 193 (1189)
T ss_pred -------------------ccCCEEEEeeccceecchhcch--heccceeecccHHHHHhhhcCCcEEEecccccHHHhh
Confidence 77777776665433211 1222 12346899999998888888999999996532
Q ss_pred --eeEEE----EccCCCCEEEEEEe--------cCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCC--Cc
Q psy9327 154 --NCICV----LTGHNHYVMCAQFH--------PTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKH--PI 217 (641)
Q Consensus 154 --~~i~~----l~~h~~~V~sl~fs--------p~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~--~v 217 (641)
.|.-. +......|-.+.|. |+.+.++.+-..|.+.|-.-.+-.....+. .+..+......| .+
T Consensus 194 ~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~d-tgm~~vgakWnh~G~v 272 (1189)
T KOG2041|consen 194 EKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEPVVVD-TGMKIVGAKWNHNGAV 272 (1189)
T ss_pred hhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCCCeEEe-cccEeecceecCCCcE
Confidence 12111 12222335556653 467889999999888776443322211111 111111111111 11
Q ss_pred eeeeeeee---eeCCCeeEEEecCCCcceeeecC-CcceEEEEEcCCccEEEEec
Q psy9327 218 WKYCKPVK---YCNPKHTLHICNRKMEPLCNIHE-NTRVKSGAWDESGVFIYTTS 268 (641)
Q Consensus 218 ~~~~~~l~---s~~~d~~I~i~d~~~~~~~~~~~-~~~I~sla~~p~g~~L~t~s 268 (641)
..+++.-. .-...+.|.++..-+..+.++.. +..|++++|...|-.++.+-
T Consensus 273 LAvcG~~~da~~~~d~n~v~Fysp~G~i~gtlkvpg~~It~lsWEg~gLriA~Av 327 (1189)
T KOG2041|consen 273 LAVCGNDSDADEPTDSNKVHFYSPYGHIVGTLKVPGSCITGLSWEGTGLRIAIAV 327 (1189)
T ss_pred EEEccCcccccCccccceEEEeccchhheEEEecCCceeeeeEEcCCceEEEEEe
Confidence 11111100 00123356677766666666654 77899999999887777654
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.13 E-value=5.3e-05 Score=83.85 Aligned_cols=155 Identities=16% Similarity=0.212 Sum_probs=110.2
Q ss_pred eccCCCCeEEEEEccC-------------CCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCC-----CCEE
Q psy9327 5 FETKSARVKGLSFHPK-------------RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ-----QPIF 66 (641)
Q Consensus 5 ~~~H~~~V~~l~fspd-------------g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~-----~~~l 66 (641)
|..|.+.|.-..+.-+ |.+++||+.||+|.|-.+-+.+...++ ....++.+|+++|+ .+.+
T Consensus 54 ~GtH~g~v~~~~~~~~~~~~~~~s~~~~~Gey~asCS~DGkv~I~sl~~~~~~~~~-df~rpiksial~Pd~~~~~sk~f 132 (846)
T KOG2066|consen 54 LGTHRGAVYLTTCQGNPKTNFDHSSSILEGEYVASCSDDGKVVIGSLFTDDEITQY-DFKRPIKSIALHPDFSRQQSKQF 132 (846)
T ss_pred eccccceEEEEecCCcccccccccccccCCceEEEecCCCcEEEeeccCCccceeE-ecCCcceeEEeccchhhhhhhhe
Confidence 4567777666665544 999999999999999999888777666 45679999999998 5578
Q ss_pred EEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC-C-eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCe
Q psy9327 67 VSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ-R-KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQT 144 (641)
Q Consensus 67 ~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t-~-~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~ 144 (641)
++|| .-| +.++.-+- | +....+..-.|+|.++.|. |.++|=++++|
T Consensus 133 v~GG----------------------------~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWand~G- 180 (846)
T KOG2066|consen 133 VSGG----------------------------MAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLIAWANDDG- 180 (846)
T ss_pred eecC----------------------------cce-EEEehhhhhcCccceeeecCccceEEEEec--CcEEEEecCCC-
Confidence 8887 555 55554221 1 1111355567899999996 67788888766
Q ss_pred EEEEECCCCeeEEEEccCCCCE------EEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 145 IRIWYWQSRNCICVLTGHNHYV------MCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 145 I~vWd~~~~~~i~~l~~h~~~V------~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
|+|||..+++.+..+......+ ..+.|.++.+ ++.|=.| +|+|..++.
T Consensus 181 v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~-LVIGW~d-~v~i~~I~~ 234 (846)
T KOG2066|consen 181 VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDR-LVIGWGD-SVKICSIKK 234 (846)
T ss_pred cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCe-EEEecCC-eEEEEEEec
Confidence 7999999988777665433333 3567765554 4444444 899998883
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=0.00078 Score=72.96 Aligned_cols=254 Identities=6% Similarity=0.001 Sum_probs=144.9
Q ss_pred CCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCC
Q psy9327 21 RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDD 100 (641)
Q Consensus 21 g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~D 100 (641)
+..++.++.+|.+..+|.++|+.+.+.+........... .+..++.+. .+
T Consensus 120 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v--~~~~v~v~~----------------------------~~ 169 (394)
T PRK11138 120 GGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVV--SDGLVLVHT----------------------------SN 169 (394)
T ss_pred CCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEE--ECCEEEEEC----------------------------CC
Confidence 456778888999999999999998887643221111111 123444444 78
Q ss_pred CeEEEEECCCCeeEEEEccCCCCeEE-EEEcc--CCCEEEEEeCCCeEEEEECCCCeeEEEEccCC--C-----CEEEEE
Q psy9327 101 YKIKVWNYKQRKCIFTLLGHLDYIRT-TFFHH--EYPWILSASDDQTIRIWYWQSRNCICVLTGHN--H-----YVMCAQ 170 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~~~h~~~V~~-v~fsp--~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~--~-----~V~sl~ 170 (641)
+.+..+|.++|+.+..+......... ..-+| .+..++.++.++.+...|..+++.+....... + ....+.
T Consensus 170 g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~ 249 (394)
T PRK11138 170 GMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVD 249 (394)
T ss_pred CEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccC
Confidence 99999999999998887643111100 00111 12356777889999999999887655442110 0 011111
Q ss_pred Eec--CCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeec
Q psy9327 171 FHP--TDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIH 247 (641)
Q Consensus 171 fsp--~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~ 247 (641)
-+| .+..++.++.+|.+..+|..+++.+=..+ .+.. ..++ .....+..+..++.+...| .+++.+....
T Consensus 250 ~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~-~~~~------~~~~-~~~~~vy~~~~~g~l~ald~~tG~~~W~~~ 321 (394)
T PRK11138 250 TTPVVVGGVVYALAYNGNLVALDLRSGQIVWKRE-YGSV------NDFA-VDGGRIYLVDQNDRVYALDTRGGVELWSQS 321 (394)
T ss_pred CCcEEECCEEEEEEcCCeEEEEECCCCCEEEeec-CCCc------cCcE-EECCEEEEEcCCCeEEEEECCCCcEEEccc
Confidence 122 35667778889999999999887543221 1100 0010 0011133445667777777 3343333222
Q ss_pred C--CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe-cccc---ceEE-EEEcCcEEEEEeCCCCeEEEEe
Q psy9327 248 E--NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR-TLDL---PIYI-TKIKGNQVYYLDRECSPHVLRI 314 (641)
Q Consensus 248 ~--~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~-~~d~---p~~~-~~~~g~~v~~~~~dg~i~v~~~ 314 (641)
. .....+.+.. +..++.++.++.+...+..+|.+. ..+. ++.. --..++.|+..++||.+..++.
T Consensus 322 ~~~~~~~~sp~v~--~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 322 DLLHRLLTAPVLY--NGYLVVGDSEGYLHWINREDGRFVAQQKVDSSGFLSEPVVADDKLLIQARDGTVYAITR 393 (394)
T ss_pred ccCCCcccCCEEE--CCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCcceeCCEEECCEEEEEeCCceEEEEeC
Confidence 1 1111222221 456788888999998888888754 2221 1111 1135678999999999887653
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.00025 Score=72.18 Aligned_cols=175 Identities=14% Similarity=0.126 Sum_probs=122.4
Q ss_pred EEEccCCCeEEEEeC-----CCcEEEEECc-cCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 15 LSFHPKRPWILSSLH-----NGVIQLWDYR-MNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 15 l~fspdg~~Lasg~~-----dg~I~iWD~~-~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
-.|||||++|++.-. .|.|-|||.. +-+.+..|..|.-.-..+.+.||++.|+++. |.+. .+|
T Consensus 56 g~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVAN--------GGI~---Thp 124 (305)
T PF07433_consen 56 GVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVAN--------GGIE---THP 124 (305)
T ss_pred EEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEc--------CCCc---cCc
Confidence 479999999998743 5889999998 5567778877777778899999998777764 2221 222
Q ss_pred cc-eeeEEEeeCCCeEEEEECCCCeeEEE--E--ccCCCCeEEEEEccCCCEEEEEeCCCe-------EEEEECCCCeeE
Q psy9327 89 CL-FRIKSVLGDDYKIKVWNYKQRKCIFT--L--LGHLDYIRTTFFHHEYPWILSASDDQT-------IRIWYWQSRNCI 156 (641)
Q Consensus 89 ~~-~~~~~~~s~Dg~I~vWD~~t~~~~~~--~--~~h~~~V~~v~fsp~~~~l~sgs~Dg~-------I~vWd~~~~~~i 156 (641)
.. ..-+...+.+.++...|..+|+.+.. + ..|.-.++.+++.++|..++..=..+. +-+++... .+
T Consensus 125 d~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~--~~ 202 (305)
T PF07433_consen 125 DSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGG--AL 202 (305)
T ss_pred ccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCC--cc
Confidence 22 11222334677888899999998877 4 338889999999999875554433222 44444322 22
Q ss_pred EEE-------ccCCCCEEEEEEecCCCEEE-EEeCCCeEEEEecCCCceeeecc
Q psy9327 157 CVL-------TGHNHYVMCAQFHPTDDIVV-SASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 157 ~~l-------~~h~~~V~sl~fsp~g~~lv-Sgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
..+ ..-.+|+-++++++++.+++ |+=..+.+.+||..+++.+...+
T Consensus 203 ~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~ 256 (305)
T PF07433_consen 203 RLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVP 256 (305)
T ss_pred eeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccc
Confidence 222 23468999999999998774 55567899999999988876654
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.00081 Score=66.93 Aligned_cols=146 Identities=13% Similarity=0.112 Sum_probs=94.7
Q ss_pred cCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEee
Q psy9327 19 PKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLG 98 (641)
Q Consensus 19 pdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s 98 (641)
+++..+++++.++.+..||..+|+.+.++.. .+++...... .+..++++.
T Consensus 34 ~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~~~-~~~~v~v~~---------------------------- 83 (238)
T PF13360_consen 34 PDGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAPVV-DGGRVYVGT---------------------------- 83 (238)
T ss_dssp EETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGEEE-ETTEEEEEE----------------------------
T ss_pred EeCCEEEEEcCCCEEEEEECCCCCEEEEeec-cccccceeee-ccccccccc----------------------------
Confidence 3566788888999999999999998877764 2222221222 333444443
Q ss_pred CCCeEEEEECCCCeeEEEE-ccCC---CCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCC---------
Q psy9327 99 DDYKIKVWNYKQRKCIFTL-LGHL---DYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY--------- 165 (641)
Q Consensus 99 ~Dg~I~vWD~~t~~~~~~~-~~h~---~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~--------- 165 (641)
.++.+..+|..+|+.+... .... ...........+..++.+..++.|..+|.++|+.+.....+...
T Consensus 84 ~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~ 163 (238)
T PF13360_consen 84 SDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFS 163 (238)
T ss_dssp TTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEET
T ss_pred ceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeec
Confidence 6789999999999999884 3321 12223333334788899998999999999999998887654422
Q ss_pred -EEEEEEecCCCEEEEEeCCCe-EEEEecCCCc
Q psy9327 166 -VMCAQFHPTDDIVVSASLDQT-IRVWDISGLR 196 (641)
Q Consensus 166 -V~sl~fsp~g~~lvSgs~Dgt-I~IWD~~~~~ 196 (641)
+.+-....++ .++.++.++. +.+ |..+++
T Consensus 164 ~~~~~~~~~~~-~v~~~~~~g~~~~~-d~~tg~ 194 (238)
T PF13360_consen 164 DINGSPVISDG-RVYVSSGDGRVVAV-DLATGE 194 (238)
T ss_dssp TEEEEEECCTT-EEEEECCTSSEEEE-ETTTTE
T ss_pred ccccceEEECC-EEEEEcCCCeEEEE-ECCCCC
Confidence 1122222234 6666676774 444 887765
|
... |
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.01 E-value=4.5e-05 Score=79.16 Aligned_cols=218 Identities=15% Similarity=0.113 Sum_probs=148.9
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECcc--C-cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRM--N-TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~--~-~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
|.+.|+.+..+ ..+++.+++.||.++.|.-.. | +.+..|..|-+.|.+++.+-++.++.|.+.
T Consensus 8 hrd~i~hv~~t-ka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d------------- 73 (558)
T KOG0882|consen 8 HRDVITHVFPT-KAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVED------------- 73 (558)
T ss_pred ccceeeeEeee-hhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccC-------------
Confidence 77778777554 457899999999999997432 2 446667889999999999999999999771
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCC----CEEEEEeCCCeEEEEECCCCee--EEE
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY----PWILSASDDQTIRIWYWQSRNC--ICV 158 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~----~~l~sgs~Dg~I~vWd~~~~~~--i~~ 158 (641)
.|..++++|+.+-..+..++--.-|=.+..++..| ..-++.-+++.|.|+|-....| ...
T Consensus 74 --------------~Dhs~KvfDvEn~DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~f 139 (558)
T KOG0882|consen 74 --------------PDHSVKVFDVENFDMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYF 139 (558)
T ss_pred --------------cccceeEEEeeccchhhhcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCcccee
Confidence 39999999998765543333221121222223333 2334556789999999765542 223
Q ss_pred EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC-CceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG-LRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~-~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
-.-|..+|.++.++|-++.++|....|.|.-|.... .+....-.. |. .++
T Consensus 140 kklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~--------------~~---------~K~------ 190 (558)
T KOG0882|consen 140 KKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLN--------------FE---------LKH------ 190 (558)
T ss_pred cccccCceEEEEeeccccceeeccccceeEeecCCCcccCcccccc--------------cc---------ccc------
Confidence 345999999999999999999999999999998764 111111000 00 000
Q ss_pred CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE
Q psy9327 238 RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII 283 (641)
Q Consensus 238 ~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I 283 (641)
...............++.|+|+|..+.+.+.|.++.++...+|.+
T Consensus 191 -eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGkl 235 (558)
T KOG0882|consen 191 -ETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKL 235 (558)
T ss_pred -cchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchh
Confidence 001111222356677899999999999999999999888777653
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=97.99 E-value=5.7e-05 Score=84.48 Aligned_cols=150 Identities=11% Similarity=0.190 Sum_probs=117.2
Q ss_pred CCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeC
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGD 99 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 99 (641)
+++.+.+|...|+|.+-|..+.+.+++|..|++.|..+. -.|+.|+++|... ..... -.
T Consensus 186 Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfD--v~GNlLitCG~S~---------------R~~~l----~~ 244 (1118)
T KOG1275|consen 186 NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFD--VQGNLLITCGYSM---------------RRYNL----AM 244 (1118)
T ss_pred cCcEEEeecccceEEeecCCcCceeeeeeccccceeeee--ccCCeEEEeeccc---------------ccccc----cc
Confidence 567889999999999999999999999999999997655 5788999988210 00000 15
Q ss_pred CCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEE---CCCC-eeEEEEccCCCCEEEEEEecC
Q psy9327 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWY---WQSR-NCICVLTGHNHYVMCAQFHPT 174 (641)
Q Consensus 100 Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd---~~~~-~~i~~l~~h~~~V~sl~fsp~ 174 (641)
|..|+|||+++-+.+.-+.-+.++ .-+.|+|.-. .++.++..|...+-| +.+. -.+..+......+++++++++
T Consensus 245 D~FvkVYDLRmmral~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn 323 (1118)
T KOG1275|consen 245 DPFVKVYDLRMMRALSPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSN 323 (1118)
T ss_pred cchhhhhhhhhhhccCCcccccCc-hhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCC
Confidence 788999999998877777666666 4578999644 678888889999988 4433 223444555566999999999
Q ss_pred CCEEEEEeCCCeEEEEe
Q psy9327 175 DDIVVSASLDQTIRVWD 191 (641)
Q Consensus 175 g~~lvSgs~DgtI~IWD 191 (641)
++.++.|..+|.|.+|-
T Consensus 324 ~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 324 GDALAFGDHEGHVNLWA 340 (1118)
T ss_pred CceEEEecccCcEeeec
Confidence 99999999999999997
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.0027 Score=68.72 Aligned_cols=268 Identities=9% Similarity=-0.046 Sum_probs=151.6
Q ss_pred CCCeEEEEeCCCcEEEEECccCccccccccccc-Ce-E-----EEEEeC--CCCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEG-PV-R-----GICFHN--QQPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~-~V-~-----~i~fsp--~~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
.+..+++++.+|.+.-+|..+|+.+.+.+.... .. . .+.-.| .+..++.++
T Consensus 68 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~-------------------- 127 (394)
T PRK11138 68 AYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGS-------------------- 127 (394)
T ss_pred ECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEc--------------------
Confidence 456788888899999999999998776643220 00 0 000001 123344443
Q ss_pred eeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEE-EEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEE-E
Q psy9327 91 FRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRT-TFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVM-C 168 (641)
Q Consensus 91 ~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~-v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~-s 168 (641)
.++.+..+|.++|+.+.+..... .+.+ ... .+..++.++.++.+..+|.++++.+..+........ .
T Consensus 128 --------~~g~l~ald~~tG~~~W~~~~~~-~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~ 196 (394)
T PRK11138 128 --------EKGQVYALNAEDGEVAWQTKVAG-EALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLR 196 (394)
T ss_pred --------CCCEEEEEECCCCCCcccccCCC-ceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCccccc
Confidence 78999999999999988776432 2221 111 244577788899999999999998877653211100 0
Q ss_pred EEEec--CCCEEEEEeCCCeEEEEecCCCceeeeccCC---C-ceeeec--ccCCCceeeeeeeeeeCCCeeEEEec-CC
Q psy9327 169 AQFHP--TDDIVVSASLDQTIRVWDISGLRKKNVAPGM---G-KLVLSM--KSKHPIWKYCKPVKYCNPKHTLHICN-RK 239 (641)
Q Consensus 169 l~fsp--~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~---~-~~v~s~--~~~~~v~~~~~~l~s~~~d~~I~i~d-~~ 239 (641)
..-+| .+..++.++.+|.+...|..+++..-..+.. + .....+ ....|+.. ...+..++.++.+...| .+
T Consensus 197 ~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~-~~~vy~~~~~g~l~ald~~t 275 (394)
T PRK11138 197 GESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVV-GGVVYALAYNGNLVALDLRS 275 (394)
T ss_pred CCCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEE-CCEEEEEEcCCeEEEEECCC
Confidence 00112 2345777888999999999887754332210 0 000000 01122211 11123334566666666 33
Q ss_pred CcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEeccccce------EEEEEcCcEEEEEeCCCCeEEEE
Q psy9327 240 MEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLPI------YITKIKGNQVYYLDRECSPHVLR 313 (641)
Q Consensus 240 ~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~p~------~~~~~~g~~v~~~~~dg~i~v~~ 313 (641)
++.+....... ...... .+..++.++.++++..++..+|.+. |..+. ..-...++.++..+.+|.+.+++
T Consensus 276 G~~~W~~~~~~-~~~~~~--~~~~vy~~~~~g~l~ald~~tG~~~-W~~~~~~~~~~~sp~v~~g~l~v~~~~G~l~~ld 351 (394)
T PRK11138 276 GQIVWKREYGS-VNDFAV--DGGRIYLVDQNDRVYALDTRGGVEL-WSQSDLLHRLLTAPVLYNGYLVVGDSEGYLHWIN 351 (394)
T ss_pred CCEEEeecCCC-ccCcEE--ECCEEEEEcCCCeEEEEECCCCcEE-EcccccCCCcccCCEEECCEEEEEeCCCEEEEEE
Confidence 44333322211 111222 2456777788888888888777642 22210 00113578889999999999988
Q ss_pred eCCcchhhhH
Q psy9327 314 IDPTEFKFKL 323 (641)
Q Consensus 314 ~~~~~~~~k~ 323 (641)
.++++...+.
T Consensus 352 ~~tG~~~~~~ 361 (394)
T PRK11138 352 REDGRFVAQQ 361 (394)
T ss_pred CCCCCEEEEE
Confidence 8887765543
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0013 Score=66.17 Aligned_cols=143 Identities=10% Similarity=0.068 Sum_probs=99.8
Q ss_pred CCCCeEEEEEccCCCeEEEEeCC--------CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHN--------GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~d--------g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
.....+.++++|+|++.++.... |.|..++.. ++ +......-...++|+|+|+++.|..+.
T Consensus 84 ~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~-~~~~~~~~~~pNGi~~s~dg~~lyv~d--------- 152 (246)
T PF08450_consen 84 PFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GK-VTVVADGLGFPNGIAFSPDGKTLYVAD--------- 152 (246)
T ss_dssp CTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SE-EEEEEEEESSEEEEEEETTSSEEEEEE---------
T ss_pred ccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-Ce-EEEEecCcccccceEECCcchheeecc---------
Confidence 45678899999999977766543 456667765 44 333334456779999999999887665
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCC-e------eEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCC
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQR-K------CIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~-~------~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~ 152 (641)
+..+.|..+++... . ....+..-.+..-++++..+|++.++....+.|.++|.+
T Consensus 153 ------------------s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~- 213 (246)
T PF08450_consen 153 ------------------SFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD- 213 (246)
T ss_dssp ------------------TTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-
T ss_pred ------------------cccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-
Confidence 37888999998532 1 122233333458899999999988888889999999977
Q ss_pred CeeEEEEccCCCCEEEEEEe-cCCCEEEE
Q psy9327 153 RNCICVLTGHNHYVMCAQFH-PTDDIVVS 180 (641)
Q Consensus 153 ~~~i~~l~~h~~~V~sl~fs-p~g~~lvS 180 (641)
++.+..+.-....+++++|. |+.+.|+.
T Consensus 214 G~~~~~i~~p~~~~t~~~fgg~~~~~L~v 242 (246)
T PF08450_consen 214 GKLLREIELPVPRPTNCAFGGPDGKTLYV 242 (246)
T ss_dssp SCEEEEEE-SSSSEEEEEEESTTSSEEEE
T ss_pred ccEEEEEcCCCCCEEEEEEECCCCCEEEE
Confidence 88887776555689999994 56554443
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00019 Score=79.61 Aligned_cols=116 Identities=7% Similarity=0.058 Sum_probs=91.4
Q ss_pred CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccC
Q psy9327 53 PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE 132 (641)
Q Consensus 53 ~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~ 132 (641)
.-+-.+|||..|+|++++- +....|.|.||- ++|++..... ..-.+++++|||.
T Consensus 17 vsti~SWHPsePlfAVA~f------------------------S~er~GSVtIfa-dtGEPqr~Vt-~P~hatSLCWHpe 70 (1416)
T KOG3617|consen 17 VSTISSWHPSEPLFAVASF------------------------SPERGGSVTIFA-DTGEPQRDVT-YPVHATSLCWHPE 70 (1416)
T ss_pred cccccccCCCCceeEEEEe------------------------cCCCCceEEEEe-cCCCCCcccc-cceehhhhccChH
Confidence 3345689999999999861 112567888874 5666533221 1112456999999
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 133 YPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 133 ~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
.-.+++|-.-|.+.+|...+.+.......|..+|..+.|||+|..++|+..-|.+..|....
T Consensus 71 ~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~ 132 (1416)
T KOG3617|consen 71 EFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDV 132 (1416)
T ss_pred HHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEeee
Confidence 98899999999999999988887777778999999999999999999999999999998764
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.0038 Score=69.58 Aligned_cols=269 Identities=10% Similarity=0.076 Sum_probs=152.1
Q ss_pred CCeEEEEeCCCcEEEEECccCccccccccccc------Ce--EEEEEeCCCCEEEEeceeeEEeeeceeeecccCCccee
Q psy9327 21 RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEG------PV--RGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFR 92 (641)
Q Consensus 21 g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~------~V--~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~ 92 (641)
+..++.++.+|.+.-.|..+|+.+.+++.... ++ ..++.. ++..++.++
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~---------------------- 117 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGT---------------------- 117 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEec----------------------
Confidence 44577788889999999999998877754332 00 011111 113455554
Q ss_pred eEEEeeCCCeEEEEECCCCeeEEEEccCCCC-----eE-EEEEccCCCEEEEEe---------CCCeEEEEECCCCeeEE
Q psy9327 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY-----IR-TTFFHHEYPWILSAS---------DDQTIRIWYWQSRNCIC 157 (641)
Q Consensus 93 ~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~-----V~-~v~fsp~~~~l~sgs---------~Dg~I~vWd~~~~~~i~ 157 (641)
.++.|.-+|.++|+.+..+...... +. ...+. +..++.++ .++.+...|..+++.+.
T Consensus 118 ------~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~--~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W 189 (488)
T cd00216 118 ------FDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIV--KKLVIIGSSGAEFFACGVRGALRAYDVETGKLLW 189 (488)
T ss_pred ------CCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEE--CCEEEEeccccccccCCCCcEEEEEECCCCceee
Confidence 7999999999999999887643221 11 11222 23454543 36889999999998877
Q ss_pred EEccCCCC--------------------E-EEEEEecCCCEEEEEeCCC------------------eEEEEecCCCcee
Q psy9327 158 VLTGHNHY--------------------V-MCAQFHPTDDIVVSASLDQ------------------TIRVWDISGLRKK 198 (641)
Q Consensus 158 ~l~~h~~~--------------------V-~sl~fsp~g~~lvSgs~Dg------------------tI~IWD~~~~~~~ 198 (641)
.+...... + .+.++.+.+..++.++.|+ .+.-.|..+++..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~ 269 (488)
T cd00216 190 RFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVK 269 (488)
T ss_pred EeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEE
Confidence 66432110 1 1234455567788887665 6888888888765
Q ss_pred eeccCCCceeeecc-cCCCcee-e---e----eeeeeeCCCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEe-
Q psy9327 199 NVAPGMGKLVLSMK-SKHPIWK-Y---C----KPVKYCNPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTT- 267 (641)
Q Consensus 199 ~~~~~~~~~v~s~~-~~~~v~~-~---~----~~l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~- 267 (641)
=...........+. ...|... . . ..+..+..++.+...| .+++.+...... ....+.+|+ .++.+
T Consensus 270 W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~--~~~~~~~~~--~vyv~~ 345 (488)
T cd00216 270 WFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEV--EQPMAYDPG--LVYLGA 345 (488)
T ss_pred EEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEee--ccccccCCc--eEEEcc
Confidence 43321111000000 0011110 0 0 0134455677777777 455555544321 112334442 22221
Q ss_pred -----------------cCCeEEEEEcCCCCeEeccccceE---------------EEEEcCcEEEEEeCCCCeEEEEeC
Q psy9327 268 -----------------SNHIKYAIVNGDHGIIRTLDLPIY---------------ITKIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 268 -----------------s~~~k~~l~~~~~g~I~~~d~p~~---------------~~~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
..++.+...+..+|.+. |..+.. .....++.|+..+.||.++.++.+
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~-W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~ 424 (488)
T cd00216 346 FHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVV-WEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDAT 424 (488)
T ss_pred ccccccCcccccCCCCCCCceEEEEEeCCCCcEe-eEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECC
Confidence 13566666666666532 211111 123567889999999999999999
Q ss_pred CcchhhhHHH
Q psy9327 316 PTEFKFKLAL 325 (641)
Q Consensus 316 ~~~~~~k~~l 325 (641)
+++...+..+
T Consensus 425 tG~~lW~~~~ 434 (488)
T cd00216 425 TGKELWKFRT 434 (488)
T ss_pred CCceeeEEEC
Confidence 9888777654
|
The alignment model contains an 8-bladed beta-propeller. |
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0026 Score=73.86 Aligned_cols=184 Identities=11% Similarity=0.077 Sum_probs=102.7
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEece-ee--EEeeeceeeeccc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK-MI--VMAYQGCILESRN 86 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~-~~--~~~~~~~~~~~~~ 86 (641)
+.|.++.|..+.+-++.+..+|.|.+-|.++... .....-++.|.+++|+||+.+++.... .. .+..+-.......
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~-eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~ 147 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETLEL-EIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKP 147 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEcccccce-eeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhccc
Confidence 6899999999999999999999999998776633 333456789999999999998776641 11 1111000000000
Q ss_pred ---CCcceeeEEEeeCCCeEEEEECCCCe-----eEE--EEcc---CCCCeEEEEEccCCCEEEEE-----eCCCeEEEE
Q psy9327 87 ---EPCLFRIKSVLGDDYKIKVWNYKQRK-----CIF--TLLG---HLDYIRTTFFHHEYPWILSA-----SDDQTIRIW 148 (641)
Q Consensus 87 ---~~~~~~~~~~~s~Dg~I~vWD~~t~~-----~~~--~~~~---h~~~V~~v~fsp~~~~l~sg-----s~Dg~I~vW 148 (641)
......-.+..++...=.-+..+.|+ .+. ++.+ ..+.=..+.|--||.+|++. .+..+|+||
T Consensus 148 L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~ 227 (1265)
T KOG1920|consen 148 LDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVY 227 (1265)
T ss_pred cccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEe
Confidence 00000000111111100011111110 000 0000 11122358899999998873 333899999
Q ss_pred ECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEe---CCCeEEEEecCCC
Q psy9327 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSAS---LDQTIRVWDISGL 195 (641)
Q Consensus 149 d~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs---~DgtI~IWD~~~~ 195 (641)
|-. +..-.+-....+-=.+++|-|.|.++++-. .|+.|.++.-++.
T Consensus 228 drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL 276 (1265)
T KOG1920|consen 228 DRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGL 276 (1265)
T ss_pred ccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCc
Confidence 966 432222222223345899999999988743 3557888876653
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00022 Score=77.11 Aligned_cols=76 Identities=17% Similarity=0.227 Sum_probs=63.7
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
..+.|.|++++|+...++.|+.||+|.+||...+. ..+....-..+.++|||+|..+++|+
T Consensus 258 L~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~--t~~~ka~~~P~~iaWHp~gai~~V~s----------------- 318 (545)
T PF11768_consen 258 LPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGV--TLLAKAEFIPTLIAWHPDGAIFVVGS----------------- 318 (545)
T ss_pred cCCcceEEecCcccceEEEEecCCeEEEEEcCCCe--eeeeeecccceEEEEcCCCcEEEEEc-----------------
Confidence 46789999999999999999999999999976653 23334455678999999999999998
Q ss_pred CcceeeEEEeeCCCeEEEEECCCCee
Q psy9327 88 PCLFRIKSVLGDDYKIKVWNYKQRKC 113 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg~I~vWD~~t~~~ 113 (641)
..|.+++||+.-...
T Consensus 319 -----------~qGelQ~FD~ALspi 333 (545)
T PF11768_consen 319 -----------EQGELQCFDMALSPI 333 (545)
T ss_pred -----------CCceEEEEEeecCcc
Confidence 889999999875543
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0054 Score=68.90 Aligned_cols=276 Identities=12% Similarity=0.188 Sum_probs=146.7
Q ss_pred EEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCC-eEEEEEccCCCEE
Q psy9327 58 CFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY-IRTTFFHHEYPWI 136 (641)
Q Consensus 58 ~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~-V~~v~fsp~~~~l 136 (641)
+|++++..++.|+ .+|.|.+.+ ++-+.++.|+.+... |..+....+..++
T Consensus 30 c~~s~~~~vvigt----------------------------~~G~V~~Ln-~s~~~~~~fqa~~~siv~~L~~~~~~~~L 80 (933)
T KOG2114|consen 30 CCSSSTGSVVIGT----------------------------ADGRVVILN-SSFQLIRGFQAYEQSIVQFLYILNKQNFL 80 (933)
T ss_pred EEcCCCceEEEee----------------------------ccccEEEec-ccceeeehheecchhhhhHhhcccCceEE
Confidence 4678888888887 899888877 334555778887776 5444444444678
Q ss_pred EEEeCCC-----eEEEEECCC------CeeE--EEEcc-----CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCcee
Q psy9327 137 LSASDDQ-----TIRIWYWQS------RNCI--CVLTG-----HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK 198 (641)
Q Consensus 137 ~sgs~Dg-----~I~vWd~~~------~~~i--~~l~~-----h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~ 198 (641)
++-+.|. .++|||+.. ..|+ ..+.+ ...++.+++.|.+-..++.|-.||.|..+.-.-.+..
T Consensus 81 ~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDr 160 (933)
T KOG2114|consen 81 FSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDR 160 (933)
T ss_pred EEEeecCCCCceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhcc
Confidence 8877664 499999853 2344 12222 3456889999999999999999999988843211111
Q ss_pred eeccCCCceeeecccCCCceeeeee-----eeeeCCCeeEEEecCCCcc--eeee-cCCcceEEEEEcCCcc-EEEEecC
Q psy9327 199 NVAPGMGKLVLSMKSKHPIWKYCKP-----VKYCNPKHTLHICNRKMEP--LCNI-HENTRVKSGAWDESGV-FIYTTSN 269 (641)
Q Consensus 199 ~~~~~~~~~v~s~~~~~~v~~~~~~-----l~s~~~d~~I~i~d~~~~~--~~~~-~~~~~I~sla~~p~g~-~L~t~s~ 269 (641)
.. +...+.....|+....+. +..+.....|..|..++.. .+.. +++..+.|.++++... ++.++++
T Consensus 161 gs-----r~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~e 235 (933)
T KOG2114|consen 161 GS-----RQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAGSE 235 (933)
T ss_pred cc-----ceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEecCc
Confidence 10 111111222232222211 1222234455666633322 3323 3477888888887654 5555544
Q ss_pred CeEEEEEcCC-CCeEeccc--cceEEEEEcCcEEEEEeCC-CC----------eEEEEeCCcchh---hhHHHhccchHH
Q psy9327 270 HIKYAIVNGD-HGIIRTLD--LPIYITKIKGNQVYYLDRE-CS----------PHVLRIDPTEFK---FKLALINHKYEE 332 (641)
Q Consensus 270 ~~k~~l~~~~-~g~I~~~d--~p~~~~~~~g~~v~~~~~d-g~----------i~v~~~~~~~~~---~k~~l~~~~~~~ 332 (641)
-..++ ..+ .|.-..++ ....+.-.+...+.+..++ |. .+++.++..+-. +..- .++
T Consensus 236 ~l~fY--~sd~~~~cfaf~~g~kk~~~~~~~g~~L~v~~~~~~~~~s~s~ss~~~i~~~~d~~n~~v~ys~v-----l~~ 308 (933)
T KOG2114|consen 236 FLYFY--DSDGRGPCFAFEVGEKKEMLVFSFGLLLCVTTDKGTENTSLSNSSSNRIFKAYDLRNRYVLYSSV-----LED 308 (933)
T ss_pred eEEEE--cCCCcceeeeecCCCeEEEEEEecCEEEEEEccCCCCCcccCccchhheeehhhhcCcccchHHh-----HHH
Confidence 32222 222 11111221 1111111221222222222 21 122222211111 1111 122
Q ss_pred HHHHHhcCc---ccc------------chHHHHHHHHhcCCccchhhhhhhcCCcHH
Q psy9327 333 VLHIVRNSR---LVG------------EVGERIKILKSCGQTSLAYLTAATHGLSEE 374 (641)
Q Consensus 333 ~l~~~~~s~---l~~------------D~~~r~~~l~~~g~~~la~~~a~~~~~~~~ 374 (641)
+.+++-... ++- |.+..+.++.....+++|...|+.+++++.
T Consensus 309 l~d~l~~w~~~~~vltsdg~~~~L~ek~le~kL~iL~kK~ly~~Ai~LAk~~~~d~d 365 (933)
T KOG2114|consen 309 LSDNLIEWSFDCLVLTSDGVVHELIEKDLETKLDILFKKNLYKVAINLAKSQHLDED 365 (933)
T ss_pred HHHHHHhcCCcEEEEecCCceeeeeeccHHHHHHHHHHhhhHHHHHHHHHhcCCCHH
Confidence 222221111 111 999999999999999999999999999764
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00023 Score=76.91 Aligned_cols=75 Identities=12% Similarity=0.100 Sum_probs=64.2
Q ss_pred cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCC
Q psy9327 119 GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195 (641)
Q Consensus 119 ~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~ 195 (641)
.....|.+++++|+...++.|+.||+|.+||...+... +..+.-.++.++|||+|..+++|+.-|.+.+||+.-.
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~--~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTL--LAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeee--eeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence 36778999999999999999999999999998766433 3334566789999999999999999999999998643
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.015 Score=62.03 Aligned_cols=258 Identities=13% Similarity=0.073 Sum_probs=140.1
Q ss_pred ccCCCeEEEE---------eCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 18 HPKRPWILSS---------LHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 18 spdg~~Lasg---------~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
|||+++++.. +..+.+.+||+.+++..... .....+....|||+|.+++-.
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~-~~~~~~~~~~~sP~g~~~~~v------------------- 60 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLT-PPPPKLQDAKWSPDGKYIAFV------------------- 60 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS--EETTBSEEEE-SSSTEEEEE-------------------
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECc-CCccccccceeecCCCeeEEE-------------------
Confidence 6888887774 22467999999987554333 337788999999999999998
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEE-EEccC----------------CCCeEEEEEccCCCEEEEEeCC-Ce------
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIF-TLLGH----------------LDYIRTTFFHHEYPWILSASDD-QT------ 144 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~-~~~~h----------------~~~V~~v~fsp~~~~l~sgs~D-g~------ 144 (641)
.++.|.+++..++...+ +..+- -+.-.++.||||+++|+....| ..
T Consensus 61 ----------~~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~ 130 (353)
T PF00930_consen 61 ----------RDNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPL 130 (353)
T ss_dssp ----------ETTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEE
T ss_pred ----------ecCceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEe
Confidence 57889999887775432 12220 1223568899999988765432 22
Q ss_pred -----------------------------EEEEECCCCeeE--EEE---ccCCCCEEEEEEecCCCEE--EEEeCCC---
Q psy9327 145 -----------------------------IRIWYWQSRNCI--CVL---TGHNHYVMCAQFHPTDDIV--VSASLDQ--- 185 (641)
Q Consensus 145 -----------------------------I~vWd~~~~~~i--~~l---~~h~~~V~sl~fsp~g~~l--vSgs~Dg--- 185 (641)
+.|+|+.+++.. ... ..-..++..+.|.+++..+ ...+.++
T Consensus 131 ~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~ 210 (353)
T PF00930_consen 131 PDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRL 210 (353)
T ss_dssp EEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEE
T ss_pred eccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEE
Confidence 444555555431 111 2345678899999998833 3344444
Q ss_pred eEEEEecCCCceeeeccC-CCceeeecccCCCceee------eeeeeeeCCCeeEEEecCCCcceeeecC-CcceE-EEE
Q psy9327 186 TIRVWDISGLRKKNVAPG-MGKLVLSMKSKHPIWKY------CKPVKYCNPKHTLHICNRKMEPLCNIHE-NTRVK-SGA 256 (641)
Q Consensus 186 tI~IWD~~~~~~~~~~~~-~~~~v~s~~~~~~v~~~------~~~l~s~~~d~~I~i~d~~~~~~~~~~~-~~~I~-sla 256 (641)
.+.+.|..++.+...... ...++- ...+.... ..-+..-..-..|...+..+.....+.. .-.|. .+.
T Consensus 211 ~l~~~d~~tg~~~~~~~e~~~~Wv~---~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~~~lT~G~~~V~~i~~ 287 (353)
T PF00930_consen 211 DLVLCDASTGETRVVLEETSDGWVD---VYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKPRQLTSGDWEVTSILG 287 (353)
T ss_dssp EEEEEEECTTTCEEEEEEESSSSSS---SSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEEEESS-SSS-EEEEEE
T ss_pred EEEEEECCCCceeEEEEecCCccee---eecccccccCCCCEEEEEEEcCCCcEEEEEcccccceeccccCceeecccce
Confidence 466677776654333211 111110 00000000 0001111123345555655544444443 33453 478
Q ss_pred EcCCccEEEEec-C----CeEEEEEcCC-CCeEeccccceEEEEEcCc-EEEEEeCCCCeEEEEe
Q psy9327 257 WDESGVFIYTTS-N----HIKYAIVNGD-HGIIRTLDLPIYITKIKGN-QVYYLDRECSPHVLRI 314 (641)
Q Consensus 257 ~~p~g~~L~t~s-~----~~k~~l~~~~-~g~I~~~d~p~~~~~~~g~-~v~~~~~dg~i~v~~~ 314 (641)
|++++..++-.+ . ...++..+.+ .+.++++... .+. .-++.++||...+...
T Consensus 288 ~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~------~~~~~~~~~Spdg~y~v~~~ 346 (353)
T PF00930_consen 288 WDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCE------DGDHYSASFSPDGKYYVDTY 346 (353)
T ss_dssp EECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTT------SSTTEEEEE-TTSSEEEEEE
T ss_pred EcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCC------CCCceEEEECCCCCEEEEEE
Confidence 888877666443 2 3355556666 7777766442 222 3566677777666543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0039 Score=64.39 Aligned_cols=223 Identities=10% Similarity=0.131 Sum_probs=125.3
Q ss_pred eccCCCCeEEEEEccCCC-eEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCC-EEEEeceeeEEeeeceee
Q psy9327 5 FETKSARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP-IFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~-~l~sgs~~~~~~~~~~~~ 82 (641)
+.+|...|.+++|||..+ ++..++.+..|+|.|+++...+..+..+ .++.+++|.-+.. ++.+|.
T Consensus 189 lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl------------ 255 (463)
T KOG1645|consen 189 LPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGL------------ 255 (463)
T ss_pred ccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEec------------
Confidence 456778899999999877 7888999999999999999999999888 8899999987655 455554
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCe-eEEEEcc--CCCCeEEEEE------ccCCCEEEEEeCCCeEEEEECCC-
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRK-CIFTLLG--HLDYIRTTFF------HHEYPWILSASDDQTIRIWYWQS- 152 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~-~~~~~~~--h~~~V~~v~f------sp~~~~l~sgs~Dg~I~vWd~~~- 152 (641)
..|.|.|||++.-+ ++..+.+ -..+|..++. .+.+.+++.++.+- ..|++.-
T Consensus 256 ----------------~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~l--~f~ei~~s 317 (463)
T KOG1645|consen 256 ----------------QNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTVL--QFYEIVFS 317 (463)
T ss_pred ----------------cCceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeehhh--hhhhhhcc
Confidence 89999999998643 2333322 2234444333 23444555555443 3455432
Q ss_pred -Ce--eEEEEccCCCCEEEEEEecCCC-EEEEEeCCCe------EEE-EecCCCceeee-ccCC-CceeeecccCCCce-
Q psy9327 153 -RN--CICVLTGHNHYVMCAQFHPTDD-IVVSASLDQT------IRV-WDISGLRKKNV-APGM-GKLVLSMKSKHPIW- 218 (641)
Q Consensus 153 -~~--~i~~l~~h~~~V~sl~fsp~g~-~lvSgs~Dgt------I~I-WD~~~~~~~~~-~~~~-~~~v~s~~~~~~v~- 218 (641)
.. ++..+ +..+...+++.++..+ .++|.-.+.+ |-. -|...+..+.. -+++ +.+-..+.....+.
T Consensus 318 ~~~~p~vlel-e~pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~ 396 (463)
T KOG1645|consen 318 AECLPCVLEL-EPPGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRA 396 (463)
T ss_pred ccCCCccccc-CCCcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceec
Confidence 11 22222 2345566666666444 4444333210 000 01111111100 0000 10000000000000
Q ss_pred --eeeeeeeeeCCCeeEEEec-CCCcceeeecCCcceEEEEEcC
Q psy9327 219 --KYCKPVKYCNPKHTLHICN-RKMEPLCNIHENTRVKSGAWDE 259 (641)
Q Consensus 219 --~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p 259 (641)
+...-+.++.+.+.+.+|| .+++.+..+.-..+|..++...
T Consensus 397 ~~~nn~iv~~gd~tn~lil~D~~s~evvQ~l~~~epv~Dicp~~ 440 (463)
T KOG1645|consen 397 VEDNNYIVVVGDSTNELILQDPHSFEVVQTLALSEPVLDICPND 440 (463)
T ss_pred cccccEEEEecCCcceeEEeccchhheeeecccCcceeecceee
Confidence 0011145666778888999 6667777777777777776543
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.021 Score=57.26 Aligned_cols=165 Identities=10% Similarity=0.115 Sum_probs=98.1
Q ss_pred eeccCCCCeEEEEEccCCC-eEEEEeCCCcEEEEECccCccccccccc-ccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 4 KFETKSARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNTLLEKFDEH-EGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~~l~~~~~h-~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.+.+-.+.+.+|+|+|+.. ++++....+.|...+. +|+.++++.-. .+-.-+|++..++.++++.-
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~E----------- 83 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEE----------- 83 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEET-----------
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEc-----------
Confidence 3445556799999999755 6677777888888886 57787776533 36678999988887777664
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCe------eEEEEc-----cCCCCeEEEEEccCCCEEEEEeCCCeEEEEEC
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRK------CIFTLL-----GHLDYIRTTFFHHEYPWILSASDDQTIRIWYW 150 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~------~~~~~~-----~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~ 150 (641)
.++.+.+.++...+ ....+. .++..+-+++|.|.+..|+.+-...-..++.+
T Consensus 84 -----------------r~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~ 146 (248)
T PF06977_consen 84 -----------------RDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEV 146 (248)
T ss_dssp -----------------TTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred -----------------CCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEE
Confidence 68888888883321 111221 25567899999998887777777766666665
Q ss_pred CC---CeeEEE--E------ccCCCCEEEEEEecC-CCEEEEEeCCCeEEEEecCCCcee
Q psy9327 151 QS---RNCICV--L------TGHNHYVMCAQFHPT-DDIVVSASLDQTIRVWDISGLRKK 198 (641)
Q Consensus 151 ~~---~~~i~~--l------~~h~~~V~sl~fsp~-g~~lvSgs~DgtI~IWD~~~~~~~ 198 (641)
+. ...+.. . ......+.++.++|. +++++-...+..+.++| ..++.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~ 205 (248)
T PF06977_consen 147 NGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVV 205 (248)
T ss_dssp ESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EE
T ss_pred ccccCccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEE
Confidence 43 222211 1 123445789999996 56667777788899998 444433
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00012 Score=81.46 Aligned_cols=186 Identities=11% Similarity=0.079 Sum_probs=122.8
Q ss_pred ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC
Q psy9327 43 LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD 122 (641)
Q Consensus 43 ~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~ 122 (641)
..+.|..|+..-+|++|+-+.++|+.|. ..|.|+++++.+|.......+|..
T Consensus 1093 ~w~~frd~~~~fTc~afs~~~~hL~vG~----------------------------~~Geik~~nv~sG~~e~s~ncH~S 1144 (1516)
T KOG1832|consen 1093 SWRSFRDETALFTCIAFSGGTNHLAVGS----------------------------HAGEIKIFNVSSGSMEESVNCHQS 1144 (1516)
T ss_pred cchhhhccccceeeEEeecCCceEEeee----------------------------ccceEEEEEccCcccccccccccc
Confidence 4566778999999999999999999997 999999999999999999999999
Q ss_pred CeEEEEEccCCCEEEEEeC-CC-eEEEEECCC-CeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceee
Q psy9327 123 YIRTTFFHHEYPWILSASD-DQ-TIRIWYWQS-RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKN 199 (641)
Q Consensus 123 ~V~~v~fsp~~~~l~sgs~-Dg-~I~vWd~~~-~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~ 199 (641)
+|+-+.-+.+|...++.+. .. ...+|+..+ +...++|.+ -.++.|+.....-+.|.......+||++++....
T Consensus 1145 avT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~~~~Hsf~e----d~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~ 1220 (1516)
T KOG1832|consen 1145 AVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTGGPRHSFDE----DKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQ 1220 (1516)
T ss_pred ccccccccCCcceeeeeccccCchHHHhccccccCccccccc----cceeehhhhHHHHHhcccccceEEEecccCcHHH
Confidence 9999999999987665543 33 577899864 334445542 3578888654443444444578999999988777
Q ss_pred ec-cCC--CceeeecccCCCceeeeeeeeeeCCCeeEEEecCC-CcceeeecCCcceEEEEEcCCccEEEEec
Q psy9327 200 VA-PGM--GKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK-MEPLCNIHENTRVKSGAWDESGVFIYTTS 268 (641)
Q Consensus 200 ~~-~~~--~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~-~~~~~~~~~~~~I~sla~~p~g~~L~t~s 268 (641)
++ .+. ..+-.+...+.|.-...+ .|| .+||.+ .+.+..+..-..-....|+|+|.-++..+
T Consensus 1221 tylt~~~~~~y~~n~a~FsP~D~LIl------ndG--vLWDvR~~~aIh~FD~ft~~~~G~FHP~g~eVIINS 1285 (1516)
T KOG1832|consen 1221 TYLTDTVTSSYSNNLAHFSPCDTLIL------NDG--VLWDVRIPEAIHRFDQFTDYGGGGFHPSGNEVIINS 1285 (1516)
T ss_pred HhcCcchhhhhhccccccCCCcceEe------eCc--eeeeeccHHHHhhhhhheecccccccCCCceEEeec
Confidence 63 221 122223344444222111 122 245522 23333333322333466777776666554
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00054 Score=45.43 Aligned_cols=39 Identities=36% Similarity=0.569 Sum_probs=35.1
Q ss_pred CeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEe
Q psy9327 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191 (641)
Q Consensus 153 ~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD 191 (641)
++++..+..|...|.++.|+|++..+++++.|+.+++||
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 456677788999999999999999999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0073 Score=66.63 Aligned_cols=117 Identities=7% Similarity=0.082 Sum_probs=92.8
Q ss_pred cccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeE-EEEccCCCCeEEEE
Q psy9327 50 HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCI-FTLLGHLDYIRTTF 128 (641)
Q Consensus 50 h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~-~~~~~h~~~V~~v~ 128 (641)
+...|+--++...+.+++.|+ .-|.+.+|+-..+... .+..+-.+.+..+.
T Consensus 32 ~~~~v~lTc~dst~~~l~~Gs----------------------------S~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~ 83 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGS----------------------------SAGSVYLYNRHTGEMRKLKNEGATGITCVRS 83 (726)
T ss_pred CcceEEEEEeecCCceEEEec----------------------------ccceEEEEecCchhhhcccccCccceEEEEE
Confidence 556677777888899999997 8999999998776543 23344556677788
Q ss_pred EccCCCEEEEEeCCCeEEEEECCCCee-----EEEE-ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 129 FHHEYPWILSASDDQTIRIWYWQSRNC-----ICVL-TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 129 fsp~~~~l~sgs~Dg~I~vWd~~~~~~-----i~~l-~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
.|++..++|.|+..|.|.++-++.+.+ ...+ ..|...|++++|++++..+++|..-|+|..-.+.+
T Consensus 84 vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 84 VSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred ecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 899999999999999999998876432 1111 24788999999999999999999999999888876
|
|
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.14 Score=52.22 Aligned_cols=147 Identities=10% Similarity=0.100 Sum_probs=93.8
Q ss_pred cCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEee
Q psy9327 19 PKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLG 98 (641)
Q Consensus 19 pdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s 98 (641)
..++.|+.|..+| +.+++........+. .+..+|..+...|+-..+++-+
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i-~~~~~I~ql~vl~~~~~llvLs---------------------------- 54 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRI-LKLSSITQLSVLPELNLLLVLS---------------------------- 54 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeE-eecceEEEEEEecccCEEEEEc----------------------------
Confidence 3578899999999 899998333222222 2333499999999888888874
Q ss_pred CCCeEEEEECCCCeeEEEE--------------ccCCCCeEEEE--EccCCCEEEEEeCCCeEEEEECCCC-----eeEE
Q psy9327 99 DDYKIKVWNYKQRKCIFTL--------------LGHLDYIRTTF--FHHEYPWILSASDDQTIRIWYWQSR-----NCIC 157 (641)
Q Consensus 99 ~Dg~I~vWD~~t~~~~~~~--------------~~h~~~V~~v~--fsp~~~~l~sgs~Dg~I~vWd~~~~-----~~i~ 157 (641)
|+.+.++++..-.....- ......+...+ -.+.+...+......+|.+|.+... +...
T Consensus 55 -d~~l~~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~k 133 (275)
T PF00780_consen 55 -DGQLYVYDLDSLEPVSTSAPLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLK 133 (275)
T ss_pred -CCccEEEEchhhccccccccccccccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeE
Confidence 699999998764433311 11223444444 1123333444444569999888653 3444
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeee
Q psy9327 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNV 200 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~ 200 (641)
.+. -.+.+.+++|. ++.++.|..+ ...+.|+.++.....
T Consensus 134 e~~-lp~~~~~i~~~--~~~i~v~~~~-~f~~idl~~~~~~~l 172 (275)
T PF00780_consen 134 EIS-LPDPPSSIAFL--GNKICVGTSK-GFYLIDLNTGSPSEL 172 (275)
T ss_pred EEE-cCCCcEEEEEe--CCEEEEEeCC-ceEEEecCCCCceEE
Confidence 554 45788999998 6777777755 577889887655433
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=97.31 E-value=4e-05 Score=82.73 Aligned_cols=159 Identities=14% Similarity=0.286 Sum_probs=107.6
Q ss_pred ccCCCCeEEEEEcc-CCCeEEEEeC----CCcEEEEECccC--ccc--ccccc-cccCeEEEEEeCCCCEEEEeceeeEE
Q psy9327 6 ETKSARVKGLSFHP-KRPWILSSLH----NGVIQLWDYRMN--TLL--EKFDE-HEGPVRGICFHNQQPIFVSGGKMIVM 75 (641)
Q Consensus 6 ~~H~~~V~~l~fsp-dg~~Lasg~~----dg~I~iWD~~~~--~~l--~~~~~-h~~~V~~i~fsp~~~~l~sgs~~~~~ 75 (641)
.+|....++++|++ |.++||+|.. |..+.|||..++ .+. ..|.+ ....+.+++|-.+.+++++|.
T Consensus 99 p~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm----- 173 (783)
T KOG1008|consen 99 PGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGM----- 173 (783)
T ss_pred ccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccccccccCccccccccCcchhhccc-----
Confidence 45667899999998 6778888853 567999999876 221 12222 445667889988888888887
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEE-CCCC
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWY-WQSR 153 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd-~~~~ 153 (641)
....++++|++... .....-.+..|.++...| ...++++-+ |+.|-+|| .+.-
T Consensus 174 -----------------------~sr~~~ifdlRqs~-~~~~svnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rni 228 (783)
T KOG1008|consen 174 -----------------------TSRSVHIFDLRQSL-DSVSSVNTKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNI 228 (783)
T ss_pred -----------------------ccchhhhhhhhhhh-hhhhhhhhhhcccceecCCCCCceeccc-cCceeeccchhhh
Confidence 78899999987332 111222455677888888 666777766 99999999 4332
Q ss_pred e-eEEEEccC----CCCEEEEEEecCCC-EEEEEeC-CCeEEEEecCC
Q psy9327 154 N-CICVLTGH----NHYVMCAQFHPTDD-IVVSASL-DQTIRVWDISG 194 (641)
Q Consensus 154 ~-~i~~l~~h----~~~V~sl~fsp~g~-~lvSgs~-DgtI~IWD~~~ 194 (641)
+ ++..+... ...+..++|.|..+ .+++.+. .++|+.+|++.
T Consensus 229 enpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~ 276 (783)
T KOG1008|consen 229 ENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV 276 (783)
T ss_pred ccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence 2 22222211 23488999999643 4455554 57999999864
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00071 Score=44.83 Aligned_cols=39 Identities=33% Similarity=0.523 Sum_probs=35.3
Q ss_pred CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEE
Q psy9327 111 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149 (641)
Q Consensus 111 ~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd 149 (641)
+++...+..|.+.|.+++|++++.++++++.|+.+++||
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 456777888999999999999999999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.022 Score=66.51 Aligned_cols=162 Identities=11% Similarity=0.089 Sum_probs=106.0
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECc----c-------------------Cccccccccccc-------------
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYR----M-------------------NTLLEKFDEHEG------------- 52 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~----~-------------------~~~l~~~~~h~~------------- 52 (641)
.+.|.+++||||+++++..+..+++.+-+.. . |+.-..|.+..+
T Consensus 109 d~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~ 188 (1265)
T KOG1920|consen 109 DNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKA 188 (1265)
T ss_pred cCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhccccccccccccccceecccccceeeecchhhhccccccccccc
Confidence 5789999999999999999888888766541 0 111112221111
Q ss_pred --------CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCC-CeEEEEECCCCeeEEEEccCCCC
Q psy9327 53 --------PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDD-YKIKVWNYKQRKCIFTLLGHLDY 123 (641)
Q Consensus 53 --------~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~D-g~I~vWD~~t~~~~~~~~~h~~~ 123 (641)
.=..|+|.-||.++++... ....+ .+|+|||-+ |..-.+-....+-
T Consensus 189 ~~~~~~~~~~~~IsWRgDg~~fAVs~~------------------------~~~~~~RkirV~drE-g~Lns~se~~~~l 243 (1265)
T KOG1920|consen 189 LEQIEQDDHKTSISWRGDGEYFAVSFV------------------------ESETGTRKIRVYDRE-GALNSTSEPVEGL 243 (1265)
T ss_pred ccchhhccCCceEEEccCCcEEEEEEE------------------------eccCCceeEEEeccc-chhhcccCccccc
Confidence 1134888888888888640 01134 799999977 5544433334444
Q ss_pred eEEEEEccCCCEEEEEe---CCCeEEEEECCCCeeEEE----EccCCCCEEEEEEecCCCEEEE---EeCCCeEEEEecC
Q psy9327 124 IRTTFFHHEYPWILSAS---DDQTIRIWYWQSRNCICV----LTGHNHYVMCAQFHPTDDIVVS---ASLDQTIRVWDIS 193 (641)
Q Consensus 124 V~~v~fsp~~~~l~sgs---~Dg~I~vWd~~~~~~i~~----l~~h~~~V~sl~fsp~g~~lvS---gs~DgtI~IWD~~ 193 (641)
-.+++|-|.|.++++-. .|+.|.++.- +|-.-.. +......|..++|+.+++.|+. ......|++|-+.
T Consensus 244 ~~~LsWkPsgs~iA~iq~~~sd~~IvffEr-NGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~ 322 (1265)
T KOG1920|consen 244 QHSLSWKPSGSLIAAIQCKTSDSDIVFFER-NGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTG 322 (1265)
T ss_pred ccceeecCCCCeEeeeeecCCCCcEEEEec-CCccccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEec
Confidence 56799999999998753 4567888873 3322221 2222334899999999998887 4555569999988
Q ss_pred CCc
Q psy9327 194 GLR 196 (641)
Q Consensus 194 ~~~ 196 (641)
+.+
T Consensus 323 Nyh 325 (1265)
T KOG1920|consen 323 NYH 325 (1265)
T ss_pred CeE
Confidence 754
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.053 Score=60.53 Aligned_cols=165 Identities=6% Similarity=0.012 Sum_probs=96.2
Q ss_pred CCCeEEEEeC-CCcEEEEECccCccccccc-ccccCeEEEEEe--CCCCEEEEeceeeEEeeeceeeecccCCcceeeEE
Q psy9327 20 KRPWILSSLH-NGVIQLWDYRMNTLLEKFD-EHEGPVRGICFH--NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKS 95 (641)
Q Consensus 20 dg~~Lasg~~-dg~I~iWD~~~~~~l~~~~-~h~~~V~~i~fs--p~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (641)
||+||..-.. +..|-.-+++..+.-...+ .....+.++.|- |+..+++++++... -..++......
T Consensus 140 dGr~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~----------PlpnDGk~l~~ 209 (635)
T PRK02888 140 DGRYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRI----------PLPNDGKDLDD 209 (635)
T ss_pred ceeEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCccccc----------ccCCCCCEeec
Confidence 6778887764 5555555554433222221 234455566664 77777777763111 11111112222
Q ss_pred EeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEe-----------------------------------
Q psy9327 96 VLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS----------------------------------- 140 (641)
Q Consensus 96 ~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs----------------------------------- 140 (641)
+.-..+.+.+.|..+.+...++.-- +....+++++++.++++.+
T Consensus 210 ~~ey~~~vSvID~etmeV~~qV~Vd-gnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~vkdG 288 (635)
T PRK02888 210 PKKYRSLFTAVDAETMEVAWQVMVD-GNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEAVKAG 288 (635)
T ss_pred ccceeEEEEEEECccceEEEEEEeC-CCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHhhhCC
Confidence 2335566777777776666655432 2345667777777766654
Q ss_pred -----CCCeEEEEECCC-----CeeEEEEccCCCCEEEEEEecCCCEEEEEe-CCCeEEEEecCCCc
Q psy9327 141 -----DDQTIRIWYWQS-----RNCICVLTGHNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDISGLR 196 (641)
Q Consensus 141 -----~Dg~I~vWd~~~-----~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~~~ 196 (641)
.+++|.+.|.++ ...+..+. -......+.++|||.++++++ .+.+|.|.|+.+.+
T Consensus 289 K~~~V~gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k 354 (635)
T PRK02888 289 KFKTIGGSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLD 354 (635)
T ss_pred CEEEECCCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhh
Confidence 235577777776 33333333 344567889999999876655 58999999998865
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.18 Score=56.18 Aligned_cols=242 Identities=8% Similarity=0.044 Sum_probs=129.0
Q ss_pred CeEEEEeCCCcEEEEECccCcccccccccccC--eEEEEEeC--CCCEEEEeceeeEEeeeceeeecccCCcceeeEEEe
Q psy9327 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGP--VRGICFHN--QQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVL 97 (641)
Q Consensus 22 ~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~--V~~i~fsp--~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (641)
..++.++.+|.|..+|.++|+.+.+++..... -..+.-+| .+..++.++... ....+
T Consensus 111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~-------------------~~~~~ 171 (488)
T cd00216 111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGA-------------------EFFAC 171 (488)
T ss_pred CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEECCEEEEecccc-------------------ccccC
Confidence 57888888999999999999998877543221 00011111 112333332000 00001
Q ss_pred eCCCeEEEEECCCCeeEEEEccCCCC--------------------e-EEEEEccCCCEEEEEeCCC-------------
Q psy9327 98 GDDYKIKVWNYKQRKCIFTLLGHLDY--------------------I-RTTFFHHEYPWILSASDDQ------------- 143 (641)
Q Consensus 98 s~Dg~I~vWD~~t~~~~~~~~~h~~~--------------------V-~~v~fsp~~~~l~sgs~Dg------------- 143 (641)
..++.+...|..+|+.+..+...... + ...++.+.+..++.++.|+
T Consensus 172 ~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~ 251 (488)
T cd00216 172 GVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGD 251 (488)
T ss_pred CCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCC
Confidence 24788999999999988877542110 1 1234444556677776554
Q ss_pred -----eEEEEECCCCeeEEEEcc--CCC----CEEEEEEe----cCCC---EEEEEeCCCeEEEEecCCCceeeeccCCC
Q psy9327 144 -----TIRIWYWQSRNCICVLTG--HNH----YVMCAQFH----PTDD---IVVSASLDQTIRVWDISGLRKKNVAPGMG 205 (641)
Q Consensus 144 -----~I~vWd~~~~~~i~~l~~--h~~----~V~sl~fs----p~g~---~lvSgs~DgtI~IWD~~~~~~~~~~~~~~ 205 (641)
.+.-.|..+++..-.+.. |.. ......+. -++. .++.++.+|.+...|.++++.+=......
T Consensus 252 ~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~ 331 (488)
T cd00216 252 NLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVE 331 (488)
T ss_pred CCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeec
Confidence 799999999998776541 211 00111111 1233 67888899999999999988654332100
Q ss_pred ceeeecccCCCceeeeeee-----------eeeCCCeeEEEec-CCCcceeeecCC---------cceEEEEEcCCccEE
Q psy9327 206 KLVLSMKSKHPIWKYCKPV-----------KYCNPKHTLHICN-RKMEPLCNIHEN---------TRVKSGAWDESGVFI 264 (641)
Q Consensus 206 ~~v~s~~~~~~v~~~~~~l-----------~s~~~d~~I~i~d-~~~~~~~~~~~~---------~~I~sla~~p~g~~L 264 (641)
.. +.... ..++...... .....++.+.-.| .+++.+...... .+.......-.+..+
T Consensus 332 ~~-~~~~~-~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v 409 (488)
T cd00216 332 QP-MAYDP-GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLV 409 (488)
T ss_pred cc-cccCC-ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeE
Confidence 00 00000 1111100000 0011345566666 444444443332 111111111235678
Q ss_pred EEecCCeEEEEEcCCCCeEe
Q psy9327 265 YTTSNHIKYAIVNGDHGIIR 284 (641)
Q Consensus 265 ~t~s~~~k~~l~~~~~g~I~ 284 (641)
+.++.++.++.++.++|.+.
T Consensus 410 ~~g~~dG~l~ald~~tG~~l 429 (488)
T cd00216 410 FAGAADGYFRAFDATTGKEL 429 (488)
T ss_pred EEECCCCeEEEEECCCCcee
Confidence 88889999999998888754
|
The alignment model contains an 8-bladed beta-propeller. |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0054 Score=68.17 Aligned_cols=125 Identities=17% Similarity=0.141 Sum_probs=84.7
Q ss_pred CcEEEEECcc----CcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEE
Q psy9327 31 GVIQLWDYRM----NTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVW 106 (641)
Q Consensus 31 g~I~iWD~~~----~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vW 106 (641)
+.|.+.|..+ +..+..+-.-.....++.++|||.++++++ ..+.+|.|.
T Consensus 296 n~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVan---------------------------klS~tVSVI 348 (635)
T PRK02888 296 SKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANG---------------------------KLSPTVTVI 348 (635)
T ss_pred CEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeC---------------------------CCCCcEEEE
Confidence 4577788776 222222223445668899999999998887 379999999
Q ss_pred ECCCCee------------EEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCC----------CeeEEEEc----
Q psy9327 107 NYKQRKC------------IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS----------RNCICVLT---- 160 (641)
Q Consensus 107 D~~t~~~------------~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~----------~~~i~~l~---- 160 (641)
|+.+.+. ..+..--.++. ..+|.++|....|-.-|..|..||+.. ...+..+.
T Consensus 349 Dv~k~k~~~~~~~~~~~~vvaevevGlGPL-HTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~ 427 (635)
T PRK02888 349 DVRKLDDLFDGKIKPRDAVVAEPELGLGPL-HTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQ 427 (635)
T ss_pred EChhhhhhhhccCCccceEEEeeccCCCcc-eEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCc
Confidence 9987542 33444334443 578999999888999999999999876 23333343
Q ss_pred -cCCCCEEEEEEecCCCEEEEEeC
Q psy9327 161 -GHNHYVMCAQFHPTDDIVVSASL 183 (641)
Q Consensus 161 -~h~~~V~sl~fsp~g~~lvSgs~ 183 (641)
||....+.=.-.|+|+||++...
T Consensus 428 pgh~~~~~g~t~~~dgk~l~~~nk 451 (635)
T PRK02888 428 PGHNHASMGETKEADGKWLVSLNK 451 (635)
T ss_pred cceeeecCCCcCCCCCCEEEEccc
Confidence 44333333334678889888644
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0017 Score=70.60 Aligned_cols=92 Identities=14% Similarity=0.239 Sum_probs=76.7
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeE-EEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVR-GICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~-~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
..|.-+.|+|..+++|.+..+|.|.+.-+. .+.+.++.-|+.+|+ +++|.|||+.+++|-
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~------------------ 81 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGF------------------ 81 (665)
T ss_pred cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEe------------------
Confidence 458889999999999999999999998877 667788877888888 999999999999997
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEc-cCCCCeEEEEEc
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLL-GHLDYIRTTFFH 130 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~-~h~~~V~~v~fs 130 (641)
.||+|++.|.+++..+..+. .-...|.++.|.
T Consensus 82 ----------kdG~I~L~Dve~~~~l~~~~~s~e~~is~~~w~ 114 (665)
T KOG4640|consen 82 ----------KDGTIRLHDVEKGGRLVSFLFSVETDISKGIWD 114 (665)
T ss_pred ----------cCCeEEEEEccCCCceeccccccccchheeecc
Confidence 89999999999988776532 234556666665
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.16 Score=54.68 Aligned_cols=146 Identities=12% Similarity=0.112 Sum_probs=85.3
Q ss_pred CeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
.|+.++|+++..-|++|..+|.|.||.+...+.-. ..-..+-....|.+- ..
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~--~~~~~~~~~~~~~~~-----~~--------------------- 54 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYG--NREQPPDLDYNFRRF-----SL--------------------- 54 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE--------------------S-------G---------------------
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCC--ccCCCcccCcccccc-----cc---------------------
Confidence 58999999998889999999999999987653321 000111111222110 00
Q ss_pred eeeEEEeeCCCeEEEEECCC---------CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE--
Q psy9327 91 FRIKSVLGDDYKIKVWNYKQ---------RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL-- 159 (641)
Q Consensus 91 ~~~~~~~s~Dg~I~vWD~~t---------~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l-- 159 (641)
.++.-.+-|+.. ..+..-+....++|++++.+.- .+++.|..+|.+.|.|++....+..-
T Consensus 55 --------~~~~~~l~di~~r~~~~~~~gf~P~~l~~~~~g~vtal~~S~i-GFvaigy~~G~l~viD~RGPavI~~~~i 125 (395)
T PF08596_consen 55 --------NNSPGKLTDISDRAPPSLKEGFLPLTLLDAKQGPVTALKNSDI-GFVAIGYESGSLVVIDLRGPAVIYNENI 125 (395)
T ss_dssp --------GGSS-SEEE-GGG--TT-SEEEEEEEEE---S-SEEEEEE-BT-SEEEEEETTSEEEEEETTTTEEEEEEEG
T ss_pred --------cCCCcceEEehhhCCcccccccCchhheeccCCcEeEEecCCC-cEEEEEecCCcEEEEECCCCeEEeeccc
Confidence 111222333321 1344555667899999999754 48899999999999999988877652
Q ss_pred cc------CCCCEEEEEEec-----CC---CEEEEEeCCCeEEEEecC
Q psy9327 160 TG------HNHYVMCAQFHP-----TD---DIVVSASLDQTIRVWDIS 193 (641)
Q Consensus 160 ~~------h~~~V~sl~fsp-----~g---~~lvSgs~DgtI~IWD~~ 193 (641)
.. ...+|+++.|.. |+ ..+++|...|.+.+|.+.
T Consensus 126 ~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn~G~v~~fkIl 173 (395)
T PF08596_consen 126 RESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTNSGNVLTFKIL 173 (395)
T ss_dssp GG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEETTSEEEEEEEE
T ss_pred cccccccccccCeeEEEEEEEecCCCcccceEEEEEeCCCCEEEEEEe
Confidence 22 345788998874 22 478889999999999873
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0021 Score=66.29 Aligned_cols=93 Identities=13% Similarity=0.138 Sum_probs=80.6
Q ss_pred EEEEECCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCC-CEEEE
Q psy9327 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTD-DIVVS 180 (641)
Q Consensus 103 I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g-~~lvS 180 (641)
+++.+-.+.+...-+.+|...|++++|+|... ++..++.+.+|+|.|+++..+...+..| ..+.+++|.-+. +.|..
T Consensus 175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYa 253 (463)
T KOG1645|consen 175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYA 253 (463)
T ss_pred eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEE
Confidence 77777776666777778888999999999776 8899999999999999999999999888 789999998865 67788
Q ss_pred EeCCCeEEEEecCCCc
Q psy9327 181 ASLDQTIRVWDISGLR 196 (641)
Q Consensus 181 gs~DgtI~IWD~~~~~ 196 (641)
|-..|.|.|||++..+
T Consensus 254 Gl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 254 GLQNGMVLVYDMRQPE 269 (463)
T ss_pred eccCceEEEEEccCCC
Confidence 8889999999998644
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.1 Score=52.45 Aligned_cols=210 Identities=11% Similarity=0.168 Sum_probs=108.7
Q ss_pred ccccCeEEEEEeCCCC-EEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccC-CCCeEE
Q psy9327 49 EHEGPVRGICFHNQQP-IFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH-LDYIRT 126 (641)
Q Consensus 49 ~h~~~V~~i~fsp~~~-~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h-~~~V~~ 126 (641)
+-...+.+|+|+|+.. ++++.. ..+.|.-.|. +|+.+.++.-. .+-.-+
T Consensus 19 g~~~e~SGLTy~pd~~tLfaV~d----------------------------~~~~i~els~-~G~vlr~i~l~g~~D~Eg 69 (248)
T PF06977_consen 19 GILDELSGLTYNPDTGTLFAVQD----------------------------EPGEIYELSL-DGKVLRRIPLDGFGDYEG 69 (248)
T ss_dssp T--S-EEEEEEETTTTEEEEEET----------------------------TTTEEEEEET-T--EEEEEE-SS-SSEEE
T ss_pred CccCCccccEEcCCCCeEEEEEC----------------------------CCCEEEEEcC-CCCEEEEEeCCCCCCcee
Confidence 4445699999999755 555555 7889988886 47777776432 355778
Q ss_pred EEEccCCCEEEEEeCCCeEEEEECCCCe------eEEEE-----ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCC
Q psy9327 127 TFFHHEYPWILSASDDQTIRIWYWQSRN------CICVL-----TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195 (641)
Q Consensus 127 v~fsp~~~~l~sgs~Dg~I~vWd~~~~~------~i~~l-----~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~ 195 (641)
+++..++.++++.-.++.+.+.++.... ....+ ..++..+-.++|.|.+..++.+-...-.+++.++..
T Consensus 70 I~y~g~~~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~ 149 (248)
T PF06977_consen 70 ITYLGNGRYVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGF 149 (248)
T ss_dssp EEE-STTEEEEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEEST
T ss_pred EEEECCCEEEEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccc
Confidence 9998888766666668999999884321 11112 135566899999999888888877767777766542
Q ss_pred ceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCccee-eecCCcceEEEEEcCC-ccEEEEecCCeEE
Q psy9327 196 RKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLC-NIHENTRVKSGAWDES-GVFIYTTSNHIKY 273 (641)
Q Consensus 196 ~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~-~~~~~~~I~sla~~p~-g~~L~t~s~~~k~ 273 (641)
. .+. .+.+.+.. .+. .......+.+++++|. |.+++-.....++
T Consensus 150 ~-----~~~---------------------------~~~~~~~~--~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l 195 (248)
T PF06977_consen 150 P-----GGF---------------------------DLFVSDDQ--DLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLL 195 (248)
T ss_dssp T------SS-----------------------------EEEE-H--HHH-HT--SS---EEEEETTTTEEEEEETTTTEE
T ss_pred c-----Ccc---------------------------ceeecccc--ccccccceeccccceEEcCCCCeEEEEECCCCeE
Confidence 2 000 00000000 000 0001234667888887 4555555566677
Q ss_pred EEEcCCCCeEeccccceEE----EEEcCcEEEEEeCCCCeEEEEeCCcchhh
Q psy9327 274 AIVNGDHGIIRTLDLPIYI----TKIKGNQVYYLDRECSPHVLRIDPTEFKF 321 (641)
Q Consensus 274 ~l~~~~~g~I~~~d~p~~~----~~~~g~~v~~~~~dg~i~v~~~~~~~~~~ 321 (641)
..++.+...+..+.+.-.. -...+.-=++.+.+|++.+.+=.+..|+|
T Consensus 196 ~~~d~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsEpNlfy~f 247 (248)
T PF06977_consen 196 LELDRQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSEPNLFYRF 247 (248)
T ss_dssp EEE-TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEETTTEEEEE
T ss_pred EEECCCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcCCceEEEe
Confidence 7777544444544442100 00011222567778888887755555544
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0043 Score=67.58 Aligned_cols=93 Identities=6% Similarity=0.082 Sum_probs=76.4
Q ss_pred ccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeE-EEEE
Q psy9327 51 EGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIR-TTFF 129 (641)
Q Consensus 51 ~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~-~v~f 129 (641)
...+.-+.|+|.-+++|.+. .+|.|-+...+ .+.+.++.-|...++ +++|
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t----------------------------~~gelli~R~n-~qRlwtip~p~~~v~~sL~W 70 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRT----------------------------EKGELLIHRLN-WQRLWTIPIPGENVTASLCW 70 (665)
T ss_pred ccceEEEEEcCccchhheec----------------------------cCCcEEEEEec-cceeEeccCCCCccceeeee
Confidence 45678899999999999997 89999999888 777888887777777 9999
Q ss_pred ccCCCEEEEEeCCCeEEEEECCCCeeEEEEc-cCCCCEEEEEEe
Q psy9327 130 HHEYPWILSASDDQTIRIWYWQSRNCICVLT-GHNHYVMCAQFH 172 (641)
Q Consensus 130 sp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~-~h~~~V~sl~fs 172 (641)
.|||+.++.|-.||+|++.|..++..+..+. .-...|.++.|.
T Consensus 71 ~~DGkllaVg~kdG~I~L~Dve~~~~l~~~~~s~e~~is~~~w~ 114 (665)
T KOG4640|consen 71 RPDGKLLAVGFKDGTIRLHDVEKGGRLVSFLFSVETDISKGIWD 114 (665)
T ss_pred cCCCCEEEEEecCCeEEEEEccCCCceeccccccccchheeecc
Confidence 9999999999999999999999887765531 133456666664
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.066 Score=58.22 Aligned_cols=159 Identities=13% Similarity=0.070 Sum_probs=100.0
Q ss_pred CCCCeEEEEEccCCCeEEEEe---CC-CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 8 KSARVKGLSFHPKRPWILSSL---HN-GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~---~d-g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
-...+..=+|+|++..++-.. .. ..+.++|+.+++...... ..+.-..-+|+|||+.++-+.
T Consensus 191 ~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l~f~~------------- 256 (425)
T COG0823 191 SGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKLAFSS------------- 256 (425)
T ss_pred cCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCCCEEEEEE-------------
Confidence 345566678999988765442 22 359999998876433332 334444578999999888776
Q ss_pred cccCCcceeeEEEeeCCCe--EEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC-C--eEEEEECCCCeeEEE
Q psy9327 84 SRNEPCLFRIKSVLGDDYK--IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD-Q--TIRIWYWQSRNCICV 158 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~--I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D-g--~I~vWd~~~~~~i~~ 158 (641)
..||. |.+.|+.+++ +..+..-.+.-..=.|+|+|++++-.++. | .|.+.|...+.. ..
T Consensus 257 --------------~rdg~~~iy~~dl~~~~-~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~r 320 (425)
T COG0823 257 --------------SRDGSPDIYLMDLDGKN-LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TR 320 (425)
T ss_pred --------------CCCCCccEEEEcCCCCc-ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eE
Confidence 25554 6666777666 33354333333456799999998877664 3 466777766554 33
Q ss_pred EccCCCCEEEEEEecCCCEEEEEeCC-Ce--EEEEecCCCc
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSASLD-QT--IRVWDISGLR 196 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs~D-gt--I~IWD~~~~~ 196 (641)
+......-..-.|+|+|++++..+.+ |. |-+.|+.++.
T Consensus 321 iT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~ 361 (425)
T COG0823 321 LTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGG 361 (425)
T ss_pred eeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCC
Confidence 33222222377899999998877743 33 5555555544
|
|
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.33 Score=52.77 Aligned_cols=65 Identities=17% Similarity=0.265 Sum_probs=47.4
Q ss_pred EEEccCCCeEEEEeCC----------C-cEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 15 LSFHPKRPWILSSLHN----------G-VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 15 l~fspdg~~Lasg~~d----------g-~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
++.+|.|-.+|....+ . .|++|+. .|+++.++.-..+.+.++.|+.+..+++..
T Consensus 34 va~a~~gGpIAi~~d~~k~~~~~~~~p~~I~iys~-sG~ll~~i~w~~~~iv~~~wt~~e~LvvV~-------------- 98 (410)
T PF04841_consen 34 VAVAPYGGPIAIIRDESKLVPVGSAKPNSIQIYSS-SGKLLSSIPWDSGRIVGMGWTDDEELVVVQ-------------- 98 (410)
T ss_pred EEEcCCCceEEEEecCcccccccCCCCcEEEEECC-CCCEeEEEEECCCCEEEEEECCCCeEEEEE--------------
Confidence 4566666656655443 1 4888885 477777765445899999999877776665
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECC
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYK 109 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~ 109 (641)
.||.++++|+.
T Consensus 99 ---------------~dG~v~vy~~~ 109 (410)
T PF04841_consen 99 ---------------SDGTVRVYDLF 109 (410)
T ss_pred ---------------cCCEEEEEeCC
Confidence 79999999987
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.36 Score=50.60 Aligned_cols=140 Identities=11% Similarity=0.149 Sum_probs=82.0
Q ss_pred CcEEEEECccCcccccccc-cccCeEEE---EEeCC----CCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCe
Q psy9327 31 GVIQLWDYRMNTLLEKFDE-HEGPVRGI---CFHNQ----QPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYK 102 (641)
Q Consensus 31 g~I~iWD~~~~~~l~~~~~-h~~~V~~i---~fsp~----~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~ 102 (641)
+.|++.|..+.+.+.+++- ....+.++ .|..+ .+++++|..... ..... ...|.
T Consensus 2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~--------~~~~~----------~~~Gr 63 (321)
T PF03178_consen 2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNY--------GEDPE----------PSSGR 63 (321)
T ss_dssp -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE----------TTSSS-----------S-EE
T ss_pred cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccc--------ccccc----------ccCcE
Confidence 3688999888877766642 23344444 34332 567777751000 00000 02289
Q ss_pred EEEEECCCC-----ee--EEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe-eEEE-EccCCCCEEEEEEec
Q psy9327 103 IKVWNYKQR-----KC--IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN-CICV-LTGHNHYVMCAQFHP 173 (641)
Q Consensus 103 I~vWD~~t~-----~~--~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~-~i~~-l~~h~~~V~sl~fsp 173 (641)
|.++++... +. +... ...++|++++-- ++. ++.|. .+.|.+|++...+ .... +......+.++...
T Consensus 64 i~v~~i~~~~~~~~~l~~i~~~-~~~g~V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~- 138 (321)
T PF03178_consen 64 ILVFEISESPENNFKLKLIHST-EVKGPVTAICSF-NGR-LVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF- 138 (321)
T ss_dssp EEEEEECSS-----EEEEEEEE-EESS-EEEEEEE-TTE-EEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE-
T ss_pred EEEEEEEcccccceEEEEEEEE-eecCcceEhhhh-CCE-EEEee-cCEEEEEEccCcccchhhheecceEEEEEEecc-
Confidence 999999884 22 2222 357899998766 343 44444 4899999998776 3322 22233466666655
Q ss_pred CCCEEEEEeCCCeEEEEecCC
Q psy9327 174 TDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 174 ~g~~lvSgs~DgtI~IWD~~~ 194 (641)
+++++.|.....+.++.++.
T Consensus 139 -~~~I~vgD~~~sv~~~~~~~ 158 (321)
T PF03178_consen 139 -KNYILVGDAMKSVSLLRYDE 158 (321)
T ss_dssp -TTEEEEEESSSSEEEEEEET
T ss_pred -ccEEEEEEcccCEEEEEEEc
Confidence 67999999888888886554
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.51 Score=50.82 Aligned_cols=157 Identities=13% Similarity=0.096 Sum_probs=108.5
Q ss_pred EEEEEccCCCeEE-EEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcce
Q psy9327 13 KGLSFHPKRPWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLF 91 (641)
Q Consensus 13 ~~l~fspdg~~La-sg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~ 91 (641)
.++++++.++.+. ....++.|.+.|..+.+.+.....- ..-..++++|++..+.++..
T Consensus 77 ~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG-~~P~~~~~~~~~~~vYV~n~-------------------- 135 (381)
T COG3391 77 AGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVG-LGPVGLAVDPDGKYVYVANA-------------------- 135 (381)
T ss_pred cceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeec-cCCceEEECCCCCEEEEEec--------------------
Confidence 4678888888444 4445689999997666555544322 25578999999988888761
Q ss_pred eeEEEee-CCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEE-EEeCCCeEEEEECCCCeeEE-E---EccCCCC
Q psy9327 92 RIKSVLG-DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWYWQSRNCIC-V---LTGHNHY 165 (641)
Q Consensus 92 ~~~~~~s-~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~-sgs~Dg~I~vWd~~~~~~i~-~---l~~h~~~ 165 (641)
. .++++.+.|..+++.+.+...-..+ ..+++.|++..+. +-..++.|.+.|.+...... . ..+-...
T Consensus 136 ------~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~ 208 (381)
T COG3391 136 ------GNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTG 208 (381)
T ss_pred ------ccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCC
Confidence 1 3789999999999888875544445 8899999999554 44588999999977665442 1 1112233
Q ss_pred EEEEEEecCCCEEEEEeCC---CeEEEEecCCCce
Q psy9327 166 VMCAQFHPTDDIVVSASLD---QTIRVWDISGLRK 197 (641)
Q Consensus 166 V~sl~fsp~g~~lvSgs~D---gtI~IWD~~~~~~ 197 (641)
...+.+.|+|..+...... +++...|..++..
T Consensus 209 P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v 243 (381)
T COG3391 209 PAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNV 243 (381)
T ss_pred CceEEECCCCCEEEEEeccCCCceEEEEeCCCceE
Confidence 4678889999866655443 4777777766443
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.2 Score=54.03 Aligned_cols=169 Identities=12% Similarity=0.145 Sum_probs=95.6
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccc--ccc------cccCeEEEEEeC-----CC---CEEEE
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK--FDE------HEGPVRGICFHN-----QQ---PIFVS 68 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~--~~~------h~~~V~~i~fsp-----~~---~~l~s 68 (641)
++...++|++++.|.-| ++|.|..+|.+.|.|++....+.. +.. .+..|+++.|+. |+ ..+++
T Consensus 82 ~~~~~g~vtal~~S~iG-Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~v 160 (395)
T PF08596_consen 82 LDAKQGPVTALKNSDIG-FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLV 160 (395)
T ss_dssp E---S-SEEEEEE-BTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEE
T ss_pred eeccCCcEeEEecCCCc-EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEE
Confidence 45568999999998555 899999999999999987665443 111 345788888862 22 35555
Q ss_pred eceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC--C-Cee----EEEEccCCCCeEEEE-EccC--------
Q psy9327 69 GGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK--Q-RKC----IFTLLGHLDYIRTTF-FHHE-------- 132 (641)
Q Consensus 69 gs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~--t-~~~----~~~~~~h~~~V~~v~-fsp~-------- 132 (641)
|. ..|.+.+|.+- . +.. ......+.++|..+. |+.+
T Consensus 161 GT----------------------------n~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At 212 (395)
T PF08596_consen 161 GT----------------------------NSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALAT 212 (395)
T ss_dssp EE----------------------------TTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-B
T ss_pred Ee----------------------------CCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCc
Confidence 54 77888888764 1 221 122224566666654 3211
Q ss_pred ------------CCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEe-----cCCCEEEEEeCCCeEEEEecCCC
Q psy9327 133 ------------YPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFH-----PTDDIVVSASLDQTIRVWDISGL 195 (641)
Q Consensus 133 ------------~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fs-----p~g~~lvSgs~DgtI~IWD~~~~ 195 (641)
-+.++....+..++++...+.+..+......-....+.+- ..+..|++-..+|.|+++.+-..
T Consensus 213 ~~~~~~l~~g~~i~g~vVvvSe~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~L 292 (395)
T PF08596_consen 213 ISAMQGLSKGISIPGYVVVVSESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSL 292 (395)
T ss_dssp HHHHHGGGGT----EEEEEE-SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT-
T ss_pred hhHhhccccCCCcCcEEEEEcccceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCc
Confidence 1235555568899999998877766554232233344552 35678888899999999999988
Q ss_pred ceeeecc
Q psy9327 196 RKKNVAP 202 (641)
Q Consensus 196 ~~~~~~~ 202 (641)
+.+....
T Consensus 293 kei~~~~ 299 (395)
T PF08596_consen 293 KEIKSVS 299 (395)
T ss_dssp -EEEEEE
T ss_pred hHhhccc
Confidence 7766554
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.41 Score=49.69 Aligned_cols=215 Identities=12% Similarity=0.051 Sum_probs=118.5
Q ss_pred EEccCCCe-EEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeE
Q psy9327 16 SFHPKRPW-ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIK 94 (641)
Q Consensus 16 ~fspdg~~-Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~ 94 (641)
.|.+++.. +.+--..+.|.-||..+++. ..+.... .+.++..-..+..|+++.
T Consensus 31 ~w~~~~~~L~w~DI~~~~i~r~~~~~g~~-~~~~~p~-~~~~~~~~d~~g~Lv~~~------------------------ 84 (307)
T COG3386 31 VWDPDRGALLWVDILGGRIHRLDPETGKK-RVFPSPG-GFSSGALIDAGGRLIACE------------------------ 84 (307)
T ss_pred cCcCCCCEEEEEeCCCCeEEEecCCcCce-EEEECCC-CcccceeecCCCeEEEEc------------------------
Confidence 46777664 44555678888888776632 3343333 334444444444455542
Q ss_pred EEeeCCCeEEEEECCCCeeEEEEcc-----CCCCeEEEEEccCCCEEEEEeC-----------CCeEEEEECCCCeeEEE
Q psy9327 95 SVLGDDYKIKVWNYKQRKCIFTLLG-----HLDYIRTTFFHHEYPWILSASD-----------DQTIRIWYWQSRNCICV 158 (641)
Q Consensus 95 ~~~s~Dg~I~vWD~~t~~~~~~~~~-----h~~~V~~v~fsp~~~~l~sgs~-----------Dg~I~vWd~~~~~~i~~ 158 (641)
.-+.+++.+++..+..+.. .....+.+...|+|.+.++... -|.++..|. .+..+..
T Consensus 85 ------~g~~~~~~~~~~~~t~~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l 157 (307)
T COG3386 85 ------HGVRLLDPDTGGKITLLAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRL 157 (307)
T ss_pred ------cccEEEeccCCceeEEeccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEe
Confidence 2356666665554322221 1234567888899886665433 133444443 4666666
Q ss_pred EccCCCCEEEEEEecCCCEEEEEeC-CCeEEEEecCC--Cceeee----ccCC--C-ceeeecccCCCceeeeeeeeeeC
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSASL-DQTIRVWDISG--LRKKNV----APGM--G-KLVLSMKSKHPIWKYCKPVKYCN 228 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs~-DgtI~IWD~~~--~~~~~~----~~~~--~-~~v~s~~~~~~v~~~~~~l~s~~ 228 (641)
+.+|-..-+.++||||++.+..+.. .+.|..|++.. +..... .... + ..=+++.+..-+|.. ...
T Consensus 158 ~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~-----a~~ 232 (307)
T COG3386 158 LDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVA-----AVW 232 (307)
T ss_pred ecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEe-----ccc
Confidence 6666667789999999987776655 47888887753 111100 0000 0 001122333334421 122
Q ss_pred CCeeEEEecCCCcceeeecCC-cceEEEEEc-CCccEEEEec
Q psy9327 229 PKHTLHICNRKMEPLCNIHEN-TRVKSGAWD-ESGVFIYTTS 268 (641)
Q Consensus 229 ~d~~I~i~d~~~~~~~~~~~~-~~I~sla~~-p~g~~L~t~s 268 (641)
..+.|..|+..+..+..+.-. ..+++++|- |+...|+.++
T Consensus 233 ~g~~v~~~~pdG~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs 274 (307)
T COG3386 233 GGGRVVRFNPDGKLLGEIKLPVKRPTNPAFGGPDLNTLYITS 274 (307)
T ss_pred CCceEEEECCCCcEEEEEECCCCCCccceEeCCCcCEEEEEe
Confidence 334788888777777776654 677777775 4456666555
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.00056 Score=74.17 Aligned_cols=157 Identities=17% Similarity=0.230 Sum_probs=109.2
Q ss_pred CCCeEEEEEcc--CCCeEEEEeCCCcEEEEECccCcc--cccccccccCeEEEEEeC-CCCEEEEeceeeEEeeeceeee
Q psy9327 9 SARVKGLSFHP--KRPWILSSLHNGVIQLWDYRMNTL--LEKFDEHEGPVRGICFHN-QQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 9 ~~~V~~l~fsp--dg~~Lasg~~dg~I~iWD~~~~~~--l~~~~~h~~~V~~i~fsp-~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
...+.|+++.- +...++.|..+|.|-+-..+...- -....+|..+.++++|++ |..+||+|-+..
T Consensus 56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkh---------- 125 (783)
T KOG1008|consen 56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKH---------- 125 (783)
T ss_pred CCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhh----------
Confidence 34577777654 445888999999999988764321 223346778999999998 566777774110
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCC--eeE--EEEcc-CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQR--KCI--FTLLG-HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~--~~~--~~~~~-h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
-.|..+.+||+.++ .+. ..|.+ -......++|..+.+++.+|.....++++|++... ...
T Consensus 126 --------------rnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~-~~~ 190 (783)
T KOG1008|consen 126 --------------RNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSL-DSV 190 (783)
T ss_pred --------------cccCCccceecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhh-hhh
Confidence 15778999999887 222 22222 44556689999999999999999999999987432 111
Q ss_pred EccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEe
Q psy9327 159 LTGHNHYVMCAQFHP-TDDIVVSASLDQTIRVWD 191 (641)
Q Consensus 159 l~~h~~~V~sl~fsp-~g~~lvSgs~DgtI~IWD 191 (641)
..-.+..+..+...| .++++++-+ ||.|.+||
T Consensus 191 ~svnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD 223 (783)
T KOG1008|consen 191 SSVNTKYVQGITVDPFSPNYFCSNS-DGDIAIWD 223 (783)
T ss_pred hhhhhhhcccceecCCCCCceeccc-cCceeecc
Confidence 111344667788888 677777665 99999999
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.02 Score=66.01 Aligned_cols=143 Identities=12% Similarity=0.107 Sum_probs=96.7
Q ss_pred CCeEEEE-eCCCcEEEEECccCcccccccccccC-eEEEEEeCC-----CCEEEEeceeeEEeeeceeeecccCCcceee
Q psy9327 21 RPWILSS-LHNGVIQLWDYRMNTLLEKFDEHEGP-VRGICFHNQ-----QPIFVSGGKMIVMAYQGCILESRNEPCLFRI 93 (641)
Q Consensus 21 g~~Lasg-~~dg~I~iWD~~~~~~l~~~~~h~~~-V~~i~fsp~-----~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~ 93 (641)
.++|+.. .....+.-.|+..|+.+..++.|... |..++=... ....+.|-
T Consensus 493 ~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGl----------------------- 549 (794)
T PF08553_consen 493 RNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGL----------------------- 549 (794)
T ss_pred cceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEE-----------------------
Confidence 3454443 45677899999999999999877643 655542211 11223332
Q ss_pred EEEeeCCCeEEEEECCCCe--eEEE-Ec--cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEE
Q psy9327 94 KSVLGDDYKIKVWNYKQRK--CIFT-LL--GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMC 168 (641)
Q Consensus 94 ~~~~s~Dg~I~vWD~~t~~--~~~~-~~--~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~s 168 (641)
.+..+..||.+... ++.. .. ......+|++-+.+| +||.|+.+|.||+||--..+....|.+-..+|..
T Consensus 550 -----s~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~ 623 (794)
T PF08553_consen 550 -----SDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIG 623 (794)
T ss_pred -----CCCceEEeccCCCCCceeeccccccccCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeE
Confidence 78899999988642 3321 11 123345666655555 6999999999999995444555567788899999
Q ss_pred EEEecCCCEEEEEeCCCeEEEEecC
Q psy9327 169 AQFHPTDDIVVSASLDQTIRVWDIS 193 (641)
Q Consensus 169 l~fsp~g~~lvSgs~DgtI~IWD~~ 193 (641)
+..+.||+||+..+.. .+.++|..
T Consensus 624 iDvt~DGkwilaTc~t-yLlLi~t~ 647 (794)
T PF08553_consen 624 IDVTADGKWILATCKT-YLLLIDTL 647 (794)
T ss_pred EEecCCCcEEEEeecc-eEEEEEEe
Confidence 9999999999877654 67777753
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.25 Score=53.25 Aligned_cols=162 Identities=14% Similarity=0.123 Sum_probs=117.9
Q ss_pred CeEEEEEccCCCeEEEEeC---CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 11 RVKGLSFHPKRPWILSSLH---NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~---dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
.-..++++|+++.+..+.. ++++.+.|..+++.+.+...-..+ ..+++.|++..+....
T Consensus 117 ~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~----------------- 178 (381)
T COG3391 117 GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTN----------------- 178 (381)
T ss_pred CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEe-----------------
Confidence 4557899999987776655 688999998888877774433345 8999999999777775
Q ss_pred CcceeeEEEeeCCCeEEEEECCCCeeEE-E----EccCCCCeEEEEEccCCCEEEEEeCC---CeEEEEECCCCeeEEE-
Q psy9327 88 PCLFRIKSVLGDDYKIKVWNYKQRKCIF-T----LLGHLDYIRTTFFHHEYPWILSASDD---QTIRIWYWQSRNCICV- 158 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg~I~vWD~~t~~~~~-~----~~~h~~~V~~v~fsp~~~~l~sgs~D---g~I~vWd~~~~~~i~~- 158 (641)
..++.|.+.|..+..... . .. -...-..+.+.|++..+...... +.+...|..++.....
T Consensus 179 ----------~~~~~v~vi~~~~~~v~~~~~~~~~~-~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~ 247 (381)
T COG3391 179 ----------SDDNTVSVIDTSGNSVVRGSVGSLVG-VGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATD 247 (381)
T ss_pred ----------cCCCeEEEEeCCCcceeccccccccc-cCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEec
Confidence 379999999977665543 1 22 22334678999999966655443 5999999988876554
Q ss_pred Ec-cCCCCEEEEEEecCCCEEEEEeC-CCeEEEEecCCCceeeecc
Q psy9327 159 LT-GHNHYVMCAQFHPTDDIVVSASL-DQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 159 l~-~h~~~V~sl~fsp~g~~lvSgs~-DgtI~IWD~~~~~~~~~~~ 202 (641)
.. +-. ....+.++|+|..+.+... .+.+.+-|..+.......+
T Consensus 248 ~~~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~ 292 (381)
T COG3391 248 LPVGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGP 292 (381)
T ss_pred cccccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeec
Confidence 22 222 4567899999998888744 4899999998877666554
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.44 E-value=1.8 Score=46.98 Aligned_cols=168 Identities=11% Similarity=0.074 Sum_probs=93.1
Q ss_pred CeEEEEEccCCCeEEEEe-CCC----cEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 11 RVKGLSFHPKRPWILSSL-HNG----VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~-~dg----~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
.+...++||+|+++|.+- ..| ++++.|+.+|+.+..--... .-.++.|.+++..|+.....
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~-~~~~~~W~~d~~~~~y~~~~------------- 190 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP-KFSSVSWSDDGKGFFYTRFD------------- 190 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE-ESEEEEECTTSSEEEEEECS-------------
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc-ccceEEEeCCCCEEEEEEeC-------------
Confidence 344688999999988663 334 49999999997654321111 12239999998876665400
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCee--EEEEccCCCC--eEEEEEccCCCEEEEEe-C--C-CeEEEEECCCC----
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDY--IRTTFFHHEYPWILSAS-D--D-QTIRIWYWQSR---- 153 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~--~~~~~~h~~~--V~~v~fsp~~~~l~sgs-~--D-g~I~vWd~~~~---- 153 (641)
...... ..+....|..|.+.+... ...|...... ...+..++++++++..+ . + ..+.+.|...+
T Consensus 191 -~~~~~~---~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~ 266 (414)
T PF02897_consen 191 -EDQRTS---DSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPD 266 (414)
T ss_dssp -TTTSS----CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS
T ss_pred -cccccc---cCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCc
Confidence 000000 111255688888877642 3445544433 56788999999876433 2 2 45888888764
Q ss_pred eeEEEEccCCCCEEEEEEecCCCEEEEEeC---CCeEEEEecCCCc
Q psy9327 154 NCICVLTGHNHYVMCAQFHPTDDIVVSASL---DQTIRVWDISGLR 196 (641)
Q Consensus 154 ~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~---DgtI~IWD~~~~~ 196 (641)
.....+..+...+....-+..+.+++.... .+.|...++....
T Consensus 267 ~~~~~l~~~~~~~~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~ 312 (414)
T PF02897_consen 267 AKPKLLSPREDGVEYYVDHHGDRLYILTNDDAPNGRLVAVDLADPS 312 (414)
T ss_dssp -SEEEEEESSSS-EEEEEEETTEEEEEE-TT-TT-EEEEEETTSTS
T ss_pred CCcEEEeCCCCceEEEEEccCCEEEEeeCCCCCCcEEEEecccccc
Confidence 233444434444444333444444444332 3566666776654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.11 Score=56.47 Aligned_cols=139 Identities=15% Similarity=0.080 Sum_probs=82.3
Q ss_pred cEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCC-CeEEEEECCC
Q psy9327 32 VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDD-YKIKVWNYKQ 110 (641)
Q Consensus 32 ~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~D-g~I~vWD~~t 110 (641)
.+.+-|.+ |.....+......+..-+|+|++..++-... . ... ..+.++|+++
T Consensus 174 ~l~~~D~d-g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f------------------------~-~~~~~~i~~~~l~~ 227 (425)
T COG0823 174 ELALGDYD-GYNQQKLTDSGSLILTPAWSPDGKKLAYVSF------------------------E-LGGCPRIYYLDLNT 227 (425)
T ss_pred eEEEEccC-CcceeEecccCcceeccccCcCCCceEEEEE------------------------e-cCCCceEEEEeccC
Confidence 34444443 4333444444456666778888776655431 0 022 5699999998
Q ss_pred CeeEEEEccCCCCeEEEEEccCCCEEE-EEeCCC--eEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeC-CCe
Q psy9327 111 RKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQ--TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL-DQT 186 (641)
Q Consensus 111 ~~~~~~~~~h~~~V~~v~fsp~~~~l~-sgs~Dg--~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~-Dgt 186 (641)
++...... ..+.-..-+|+|||+.++ +...|+ .|++.|+.+++. ..+..-.+.-..=.|+|||+.++-.|+ .|.
T Consensus 228 g~~~~i~~-~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~-~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~ 305 (425)
T COG0823 228 GKRPVILN-FNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNL-PRLTNGFGINTSPSWSPDGSKIVFTSDRGGR 305 (425)
T ss_pred Cccceeec-cCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCcc-eecccCCccccCccCCCCCCEEEEEeCCCCC
Confidence 86544433 233334568999999765 444555 477778877763 335433333346689999998776654 444
Q ss_pred --EEEEecCCCcee
Q psy9327 187 --IRVWDISGLRKK 198 (641)
Q Consensus 187 --I~IWD~~~~~~~ 198 (641)
|.+.|..+....
T Consensus 306 p~I~~~~~~g~~~~ 319 (425)
T COG0823 306 PQIYLYDLEGSQVT 319 (425)
T ss_pred cceEEECCCCCcee
Confidence 555566665543
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.078 Score=61.24 Aligned_cols=128 Identities=14% Similarity=0.112 Sum_probs=87.2
Q ss_pred CCCeEEEEECCCCeeEEEEccCCCC-eEEEEEcc-----CCCEEEEEeCCCeEEEEECCCCe--eEEE-E--ccCCCCEE
Q psy9327 99 DDYKIKVWNYKQRKCIFTLLGHLDY-IRTTFFHH-----EYPWILSASDDQTIRIWYWQSRN--CICV-L--TGHNHYVM 167 (641)
Q Consensus 99 ~Dg~I~vWD~~t~~~~~~~~~h~~~-V~~v~fsp-----~~~~l~sgs~Dg~I~vWd~~~~~--~i~~-l--~~h~~~V~ 167 (641)
+...++-.|++.|+.+..+..|.+. |..++-.. +....+.|-.+..+..||.+-.. ++.. . .......+
T Consensus 502 ~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs 581 (794)
T PF08553_consen 502 NPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFS 581 (794)
T ss_pred CCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCCce
Confidence 5678999999999999999988765 65554321 12346778888999999998642 2211 1 12334466
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeec
Q psy9327 168 CAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIH 247 (641)
Q Consensus 168 sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~ 247 (641)
|++-+.+| .|+.||.+|.||+||--+.+.+..+|+.
T Consensus 582 ~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~l------------------------------------------- 617 (794)
T PF08553_consen 582 CFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGL------------------------------------------- 617 (794)
T ss_pred EEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCC-------------------------------------------
Confidence 77665544 6888999999999994433333333322
Q ss_pred CCcceEEEEEcCCccEEEEecCCe
Q psy9327 248 ENTRVKSGAWDESGVFIYTTSNHI 271 (641)
Q Consensus 248 ~~~~I~sla~~p~g~~L~t~s~~~ 271 (641)
+.+|..+..+.||+|+++++..-
T Consensus 618 -G~pI~~iDvt~DGkwilaTc~ty 640 (794)
T PF08553_consen 618 -GDPIIGIDVTADGKWILATCKTY 640 (794)
T ss_pred -CCCeeEEEecCCCcEEEEeecce
Confidence 56777888888999988877543
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=96.38 E-value=1 Score=44.63 Aligned_cols=260 Identities=10% Similarity=0.052 Sum_probs=132.3
Q ss_pred CCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCC
Q psy9327 21 RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDD 100 (641)
Q Consensus 21 g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~D 100 (641)
|++++.|..+|.+.+-+..+|.+...|..-+.-=......+++..+..|+ +|
T Consensus 63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgs----------------------------hd 114 (354)
T KOG4649|consen 63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGS----------------------------HD 114 (354)
T ss_pred CCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEec----------------------------CC
Confidence 56788999999999999999988888754332222234467888999997 99
Q ss_pred CeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC--CCCEEEEEEec--CCC
Q psy9327 101 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH--NHYVMCAQFHP--TDD 176 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h--~~~V~sl~fsp--~g~ 176 (641)
++....|+++..++.+.+...+.-.+-+..|-...+..+...|.+.--+.++.. -.++-.| .+++.+ +| -+.
T Consensus 115 ~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~~~~-~~~~w~~~~~~PiF~---splcv~~ 190 (354)
T KOG4649|consen 115 GNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKNPYS-STEFWAATRFGPIFA---SPLCVGS 190 (354)
T ss_pred CcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceEEEEccCCCC-cceehhhhcCCcccc---Cceeccc
Confidence 999999999999988866433322233444523334445555554444433321 1111111 122211 11 133
Q ss_pred EEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCce-eeeee----eee-eCCCeeEEEec-CCCcce-eeecC
Q psy9327 177 IVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIW-KYCKP----VKY-CNPKHTLHICN-RKMEPL-CNIHE 248 (641)
Q Consensus 177 ~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~-~~~~~----l~s-~~~d~~I~i~d-~~~~~~-~~~~~ 248 (641)
.+..+.-||.+.-+| .+++.+-.....+...+.-...+|.- .+.+. +.+ ....+.+ +|. ..+... ..+.+
T Consensus 191 sv~i~~VdG~l~~f~-~sG~qvwr~~t~GpIf~~Pc~s~Ps~q~i~~~~~~Cf~~~~p~~ghL-~w~~~~g~t~~vy~~p 268 (354)
T KOG4649|consen 191 SVIITTVDGVLTSFD-ESGRQVWRPATKGPIFMEPCESRPSCQQISLENENCFCAPLPIAGHL-LWATQSGTTLHVYLSP 268 (354)
T ss_pred eEEEEEeccEEEEEc-CCCcEEEeecCCCceecccccCCCcceEEEEecCCeEEEeccccceE-EEEecCCcEEEEEeCc
Confidence 444455566666555 33333322221121112112222321 00000 000 0111111 222 111000 00000
Q ss_pred CcceEEEEEc-C---CccEEEEecCCeEEEEE---------cCCCCeE---eccccceEEEE---EcCcEEEEEeCCCCe
Q psy9327 249 NTRVKSGAWD-E---SGVFIYTTSNHIKYAIV---------NGDHGII---RTLDLPIYITK---IKGNQVYYLDRECSP 309 (641)
Q Consensus 249 ~~~I~sla~~-p---~g~~L~t~s~~~k~~l~---------~~~~g~I---~~~d~p~~~~~---~~g~~v~~~~~dg~i 309 (641)
. + ..+++ + ...++...+.|+|+.+. ..++|.+ ..++++-.++. .-+.+++.+.||.-+
T Consensus 269 ~--l-~F~~h~~~~S~~~ll~~~s~dgkv~il~~~~sl~~~~s~~g~lq~~~~~el~~eIFsSPvii~grl~igcRDdYv 345 (354)
T KOG4649|consen 269 K--L-RFDLHSPGISYPKLLRRSSGDGKVMILMTSKSLAEISSNGGELQNLEAIELSNEIFSSPVIIDGRLLIGCRDDYV 345 (354)
T ss_pred c--c-ceeccCCCCcchhhhhhhcCCCcEEEEEecccccccccCCCccceEEEeecCcccccCCeEEccEEEEEEccCeE
Confidence 0 0 01111 1 14678888888888877 6666654 43344422222 224779999999999
Q ss_pred EEEEeCCc
Q psy9327 310 HVLRIDPT 317 (641)
Q Consensus 310 ~v~~~~~~ 317 (641)
+.|++++.
T Consensus 346 ~cldl~~~ 353 (354)
T KOG4649|consen 346 RCLDLDTW 353 (354)
T ss_pred EEEecccc
Confidence 99998863
|
|
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.083 Score=57.71 Aligned_cols=148 Identities=16% Similarity=0.293 Sum_probs=91.6
Q ss_pred CCeEEEEEccCCCeEEEEe--CCCcEEEEECccCcccccccccccCeEEEEEeCC----CCEEEEeceeeEEeeeceeee
Q psy9327 10 ARVKGLSFHPKRPWILSSL--HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ----QPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~--~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~----~~~l~sgs~~~~~~~~~~~~~ 83 (641)
.+|.+++|..-.+.+++.. .+|.++.=| .+.+.+| +.|.+++|.|- .+.+++..
T Consensus 20 HPvhGlaWTDGkqVvLT~L~l~~gE~kfGd---s~viGqF----EhV~GlsW~P~~~~~~paLLAVQ------------- 79 (671)
T PF15390_consen 20 HPVHGLAWTDGKQVVLTDLQLHNGEPKFGD---SKVIGQF----EHVHGLSWAPPCTADTPALLAVQ------------- 79 (671)
T ss_pred ccccceEecCCCEEEEEeeeeeCCccccCC---ccEeecc----ceeeeeeecCcccCCCCceEEEe-------------
Confidence 5788899984444555554 466655433 2344445 57999999984 44444444
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECC-----CCeeEEEEccCCC-----CeEEEEEccCCCEEEEEeCCCeEEEEECCC-
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYK-----QRKCIFTLLGHLD-----YIRTTFFHHEYPWILSASDDQTIRIWYWQS- 152 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~-----t~~~~~~~~~h~~-----~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~- 152 (641)
+...|.||-+. +++.+..-..+-+ --.++.|||....++.-.....=.+++++.
T Consensus 80 ---------------HkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d 144 (671)
T PF15390_consen 80 ---------------HKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCD 144 (671)
T ss_pred ---------------ccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeC
Confidence 78899999875 2333333222221 124688999998776655444334556543
Q ss_pred -CeeEEEEccCCCCEEEEEEecCCCEEEEEeCC-CeEEEEecC
Q psy9327 153 -RNCICVLTGHNHYVMCAQFHPTDDIVVSASLD-QTIRVWDIS 193 (641)
Q Consensus 153 -~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~D-gtI~IWD~~ 193 (641)
.+....++ -.+.|.|.+|.+||+.|+.+-.. =.-+|||-.
T Consensus 145 ~srVkaDi~-~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~ 186 (671)
T PF15390_consen 145 SSRVKADIK-TSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSA 186 (671)
T ss_pred CceEEEecc-CCceEEEEEecCcCCEEEEEeCCeEEEEEecCc
Confidence 33333443 46789999999999877765443 356778753
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=96.36 E-value=1.9 Score=48.47 Aligned_cols=109 Identities=9% Similarity=-0.021 Sum_probs=66.6
Q ss_pred CCeEEEEeCCCcEEEEECccCcccccccccc-cCeEE----------EEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 21 RPWILSSLHNGVIQLWDYRMNTLLEKFDEHE-GPVRG----------ICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 21 g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~-~~V~~----------i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
+..++.++.++.|.-.|..+|+.+.+++... ..+.. ++.. +..++.++
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~--~~~v~v~t------------------- 127 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALY--DGKVFFGT------------------- 127 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEE--CCEEEEEc-------------------
Confidence 4567777888999999999999888775321 11111 1111 12333343
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCC-eEEEEEcc---CCCEEEEEe------CCCeEEEEECCCCeeEEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY-IRTTFFHH---EYPWILSAS------DDQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~-V~~v~fsp---~~~~l~sgs------~Dg~I~vWd~~~~~~i~~l 159 (641)
.|+.+.-.|.++|+.+......... -..+.-+| ++. ++.++ .++.|.-+|.++++.+-.+
T Consensus 128 ---------~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g~-Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~ 197 (527)
T TIGR03075 128 ---------LDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKGK-VITGISGGEFGVRGYVTAYDAKTGKLVWRR 197 (527)
T ss_pred ---------CCCEEEEEECCCCCEEeecccccccccccccCCcEEECCE-EEEeecccccCCCcEEEEEECCCCceeEec
Confidence 7899999999999998876531100 00111112 343 44443 2689999999999877665
Q ss_pred c
Q psy9327 160 T 160 (641)
Q Consensus 160 ~ 160 (641)
.
T Consensus 198 ~ 198 (527)
T TIGR03075 198 Y 198 (527)
T ss_pred c
Confidence 3
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.11 Score=54.07 Aligned_cols=145 Identities=7% Similarity=0.002 Sum_probs=98.0
Q ss_pred CCeEEEEEccCCCeEEEEeC------C---CcEEEEECc-cCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 10 ARVKGLSFHPKRPWILSSLH------N---GVIQLWDYR-MNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~------d---g~I~iWD~~-~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
.+-+.+..+|+|.+.++... + ..=.+|-+. .+..++.+..+-..-++|+||||++.+..+.
T Consensus 111 ~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aD--------- 181 (307)
T COG3386 111 NRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVAD--------- 181 (307)
T ss_pred CCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEe---------
Confidence 45677888999886554433 0 111455544 4555555656666778999999999988887
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCC--C----e-eEEEEccCCCCeEEEEEccCCCEEEEEeCCC-eEEEEECC
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQ--R----K-CIFTLLGHLDYIRTTFFHHEYPWILSASDDQ-TIRIWYWQ 151 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t--~----~-~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg-~I~vWd~~ 151 (641)
+..+.|.-|++.. + + ....+..+.+..-.++...+|.+.+++..+| .|.+|+..
T Consensus 182 ------------------T~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd 243 (307)
T COG3386 182 ------------------TPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD 243 (307)
T ss_pred ------------------CCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC
Confidence 4668888888752 1 1 1222333556777888888999877666665 99999988
Q ss_pred CCeeEEEEccCCCCEEEEEEec-CCCEEEEEe
Q psy9327 152 SRNCICVLTGHNHYVMCAQFHP-TDDIVVSAS 182 (641)
Q Consensus 152 ~~~~i~~l~~h~~~V~sl~fsp-~g~~lvSgs 182 (641)
++.+....-+...+++++|-- +.+.|...+
T Consensus 244 -G~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs 274 (307)
T COG3386 244 -GKLLGEIKLPVKRPTNPAFGGPDLNTLYITS 274 (307)
T ss_pred -CcEEEEEECCCCCCccceEeCCCcCEEEEEe
Confidence 888888876667788888853 344444333
|
|
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.14 Score=53.69 Aligned_cols=140 Identities=18% Similarity=0.302 Sum_probs=91.3
Q ss_pred CCeEEEEeC---------C-CcEEEEECccC----cccccc--cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 21 RPWILSSLH---------N-GVIQLWDYRMN----TLLEKF--DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 21 g~~Lasg~~---------d-g~I~iWD~~~~----~~l~~~--~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
.++++.|.. . |.|.++++... ..+... ....++|++++-- ++ .++++
T Consensus 42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~-~~-~lv~~--------------- 104 (321)
T PF03178_consen 42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF-NG-RLVVA--------------- 104 (321)
T ss_dssp SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE-TT-EEEEE---------------
T ss_pred cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh-CC-EEEEe---------------
Confidence 568887754 2 88999999873 122222 2457899998876 33 45555
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCe-eEEEEc-cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCC-CeeEEEE--
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRK-CIFTLL-GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS-RNCICVL-- 159 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~-~~~~~~-~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~-~~~i~~l-- 159 (641)
.++.|.+|++...+ ....-. ...-.+.++... +++++.|.....+.++.++. ...+..+
T Consensus 105 --------------~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~~~~~~l~~va~ 168 (321)
T PF03178_consen 105 --------------VGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRYDEENNKLILVAR 168 (321)
T ss_dssp --------------ETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEEETTTE-EEEEEE
T ss_pred --------------ecCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEEEccCCEEEEEEe
Confidence 36899999998877 433322 122355555544 66899999888888886553 2323232
Q ss_pred ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecC
Q psy9327 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193 (641)
Q Consensus 160 ~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~ 193 (641)
......++++.|-++++.++.+..+|.+.++...
T Consensus 169 d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 169 DYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp ESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred cCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 2235568899998777899999999999999875
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.015 Score=66.99 Aligned_cols=101 Identities=19% Similarity=0.337 Sum_probs=77.3
Q ss_pred CCCeEEEEeCCCcEEEEECccC-cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEee
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLG 98 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~-~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s 98 (641)
.+-+++.|+..|.|-..|+... .....=+.-.++|++++|+.+|..++.|-
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~---------------------------- 149 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGL---------------------------- 149 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceecccc----------------------------
Confidence 4557889999999999987642 12233334568999999999999999997
Q ss_pred CCCeEEEEECCCCeeEEEEccCCCCeEEEEEc---cCCCEEEEEeCCCeEEEEEC
Q psy9327 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH---HEYPWILSASDDQTIRIWYW 150 (641)
Q Consensus 99 ~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fs---p~~~~l~sgs~Dg~I~vWd~ 150 (641)
.+|.|.+||..++++++.+..|..++.++-++ .++..+.++..-|. +|..
T Consensus 150 ~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 150 GDGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred CCCcEEEEEccCCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence 89999999999999999998888777766554 35556777766665 5654
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.54 Score=50.04 Aligned_cols=254 Identities=11% Similarity=0.055 Sum_probs=121.7
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccc-ccccc----------------ccCeEEEEEeCCCCEEEEece
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLE-KFDEH----------------EGPVRGICFHNQQPIFVSGGK 71 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~-~~~~h----------------~~~V~~i~fsp~~~~l~sgs~ 71 (641)
...+....|||+|++++... ++.|.+++..+++... +..+- -+.-.++-||||+++|+...-
T Consensus 42 ~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~ 120 (353)
T PF00930_consen 42 PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRF 120 (353)
T ss_dssp ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEE
T ss_pred ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEE
Confidence 45678899999999988875 5789999886663321 11110 122356889999999998751
Q ss_pred eeEEeeeceeeeccc----CCcc--eeeEEEeeCCC--eEEEEECCCCeeEE--EE---ccCCCCeEEEEEccCCCEEEE
Q psy9327 72 MIVMAYQGCILESRN----EPCL--FRIKSVLGDDY--KIKVWNYKQRKCIF--TL---LGHLDYIRTTFFHHEYPWILS 138 (641)
Q Consensus 72 ~~~~~~~~~~~~~~~----~~~~--~~~~~~~s~Dg--~I~vWD~~t~~~~~--~~---~~h~~~V~~v~fsp~~~~l~s 138 (641)
.-.....-.+..... -|.. ..+-.+|..+. .+.|+|+.+++... .. ..-...+..+.|.+++..|+.
T Consensus 121 d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~ 200 (353)
T PF00930_consen 121 DEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWV 200 (353)
T ss_dssp E-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEE
T ss_pred CCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEE
Confidence 000000000000001 1111 11122333333 45668888886532 12 234567899999999983433
Q ss_pred --EeCCC---eEEEEECCCCeeEEEEcc-CCCC---EEEEEEe-cCCC-EEEEEeCCCe--EEEEecCCCceeeeccCCC
Q psy9327 139 --ASDDQ---TIRIWYWQSRNCICVLTG-HNHY---VMCAQFH-PTDD-IVVSASLDQT--IRVWDISGLRKKNVAPGMG 205 (641)
Q Consensus 139 --gs~Dg---~I~vWd~~~~~~i~~l~~-h~~~---V~sl~fs-p~g~-~lvSgs~Dgt--I~IWD~~~~~~~~~~~~~~ 205 (641)
.+.++ .+.+.|..++.+...+.. ..+. -....|. +++. ++.....||. +...|..++.......|.
T Consensus 201 ~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~~~lT~G~- 279 (353)
T PF00930_consen 201 QWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKPRQLTSGD- 279 (353)
T ss_dssp EEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEEEESS-SS-
T ss_pred EEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccccceeccccCc-
Confidence 34443 466778877654333321 2222 2345554 6554 4445556775 444555555533222221
Q ss_pred cee---eecccCC-Cceeeeeeeeee--CCCeeEEEecCC-CcceeeecCCcce-EEEEEcCCccEEEEec
Q psy9327 206 KLV---LSMKSKH-PIWKYCKPVKYC--NPKHTLHICNRK-MEPLCNIHENTRV-KSGAWDESGVFIYTTS 268 (641)
Q Consensus 206 ~~v---~s~~~~~-~v~~~~~~l~s~--~~d~~I~i~d~~-~~~~~~~~~~~~I-~sla~~p~g~~L~t~s 268 (641)
-.| ....... .++- .++. .....+...+.. ......+...... .++.|+|+|.+++...
T Consensus 280 ~~V~~i~~~d~~~~~iyf----~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~~ 346 (353)
T PF00930_consen 280 WEVTSILGWDEDNNRIYF----TANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDTY 346 (353)
T ss_dssp S-EEEEEEEECTSSEEEE----EESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-TTSSEEEEEE
T ss_pred eeecccceEcCCCCEEEE----EecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEECCCCCEEEEEE
Confidence 111 1111111 0110 1111 123334333433 4444444443333 4888999888777543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.053 Score=62.76 Aligned_cols=62 Identities=24% Similarity=0.556 Sum_probs=54.4
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEe---CCCCEEEEec
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH---NQQPIFVSGG 70 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fs---p~~~~l~sgs 70 (641)
.++|++++|+.+|..++.|-.+|.|.+||...++.++.+..|..|+.++-++ .++..++++.
T Consensus 130 ~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D 194 (1206)
T KOG2079|consen 130 QGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSD 194 (1206)
T ss_pred CCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEEEEEeCCCcEEEEcc
Confidence 4799999999999999999999999999999999999999888888887665 4566777776
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.28 Score=42.36 Aligned_cols=83 Identities=12% Similarity=0.176 Sum_probs=57.2
Q ss_pred CCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEec-C--C
Q psy9327 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP-T--D 175 (641)
Q Consensus 99 ~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp-~--g 175 (641)
.|..|++|+- ...+..+..+ +.|..++-... ..|+.|..+|+|-+|+-..+ +...+ ....++++++.. + |
T Consensus 23 ~D~~IRvf~~--~e~~~Ei~e~-~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~R--lWRiK-SK~~~~~~~~~D~~gdG 95 (111)
T PF14783_consen 23 DDFEIRVFKG--DEIVAEITET-DKVTSLCSLGG-GRFAYALANGTVGVYDRSQR--LWRIK-SKNQVTSMAFYDINGDG 95 (111)
T ss_pred CCcEEEEEeC--CcEEEEEecc-cceEEEEEcCC-CEEEEEecCCEEEEEeCcce--eeeec-cCCCeEEEEEEcCCCCC
Confidence 9999999974 3667777644 55666665555 56999999999999985433 22333 234477776655 2 2
Q ss_pred -CEEEEEeCCCeEE
Q psy9327 176 -DIVVSASLDQTIR 188 (641)
Q Consensus 176 -~~lvSgs~DgtI~ 188 (641)
+-|++|-.+|.|-
T Consensus 96 ~~eLI~GwsnGkve 109 (111)
T PF14783_consen 96 VPELIVGWSNGKVE 109 (111)
T ss_pred ceEEEEEecCCeEE
Confidence 4788888888764
|
|
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=96.12 E-value=1.2 Score=48.56 Aligned_cols=158 Identities=13% Similarity=0.141 Sum_probs=84.1
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc-------cccccccccCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL-------LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~-------l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
++.-..+.|.++.|+.+.. |++-..||.++++|+. |+. +....-.+..+....+..+|-.++++
T Consensus 75 ~i~w~~~~iv~~~wt~~e~-LvvV~~dG~v~vy~~~-G~~~fsl~~~i~~~~v~e~~i~~~~~~~~GivvLt~------- 145 (410)
T PF04841_consen 75 SIPWDSGRIVGMGWTDDEE-LVVVQSDGTVRVYDLF-GEFQFSLGEEIEEEKVLECRIFAIWFYKNGIVVLTG------- 145 (410)
T ss_pred EEEECCCCEEEEEECCCCe-EEEEEcCCEEEEEeCC-CceeechhhhccccCcccccccccccCCCCEEEECC-------
Confidence 3333348899999988665 4555689999999985 333 11112222333333444456444443
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe-eEEEE---c-------cCCCCeEEEEEccCCCEEEEEeCCCeE
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK-CIFTL---L-------GHLDYIRTTFFHHEYPWILSASDDQTI 145 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~-~~~~~---~-------~h~~~V~~v~fsp~~~~l~sgs~Dg~I 145 (641)
++.+.+-+-.... ....+ . .+........++.+....+....++.+
T Consensus 146 -----------------------~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i 202 (410)
T PF04841_consen 146 -----------------------NNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETI 202 (410)
T ss_pred -----------------------CCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEE
Confidence 2223222211111 00111 0 011000002344455555555555666
Q ss_pred EEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce
Q psy9327 146 RIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 197 (641)
Q Consensus 146 ~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~ 197 (641)
.+-+-...+. +. ..+++..++.||+|+.++.-..+|.+.+.+..-.+.
T Consensus 203 ~~i~~~~~~~---i~-~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~ 250 (410)
T PF04841_consen 203 YIIDENSFKQ---ID-SDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEK 250 (410)
T ss_pred EEEEcccccc---cc-CCCCeEEEEECCCCCEEEEEECCCCEEEEECcccce
Confidence 6444322111 22 246899999999999999999999998887654433
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.15 Score=57.78 Aligned_cols=161 Identities=6% Similarity=-0.040 Sum_probs=92.5
Q ss_pred CCeEEEEEccCCCeEEEEe------CCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 10 ARVKGLSFHPKRPWILSSL------HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~------~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
..+.+.++||+|+.++... .|+.-.||=...+.....+. .......-.|+|+|.++.+..+.
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt-~g~~~t~PsWspDG~~lw~v~dg----------- 417 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVL-EGHSLTRPSWSLDADAVWVVVDG----------- 417 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeee-cCCCCCCceECCCCCceEEEecC-----------
Confidence 4578899999999887665 24444455433222222221 12237778999999988777410
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEE---EECCCCe-eE---
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI---WYWQSRN-CI--- 156 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~v---Wd~~~~~-~i--- 156 (641)
+...+.......+.+.+.++..+.... ...+.|..+.|+|||..++... ++.|.+ -.-..+. .+
T Consensus 418 -----~~~~~v~~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~ 488 (591)
T PRK13616 418 -----NTVVRVIRDPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNP 488 (591)
T ss_pred -----cceEEEeccCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeeccc
Confidence 001111111234556666776655433 3456799999999999887766 467776 3333443 11
Q ss_pred EEEc-cCCCCEEEEEEecCCCEEEEEeCCCeEEEEec
Q psy9327 157 CVLT-GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192 (641)
Q Consensus 157 ~~l~-~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~ 192 (641)
..+. +-.+.+.++.|.+++.++ .+..++...+|.+
T Consensus 489 ~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v 524 (591)
T PRK13616 489 REVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYV 524 (591)
T ss_pred EEeecccCCccccceEecCCEEE-EEecCCCCceEEE
Confidence 1122 233346889999988855 4444444444543
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.32 Score=42.04 Aligned_cols=100 Identities=11% Similarity=0.200 Sum_probs=65.4
Q ss_pred eEEEEEcc---CC-CeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 12 VKGLSFHP---KR-PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 12 V~~l~fsp---dg-~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
|++|++.. || +-|++|+.|..|++|+- .+.+..+... +.|.+++-... ..|+.+-
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~--~e~~~Ei~e~-~~v~~L~~~~~-~~F~Y~l----------------- 60 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKG--DEIVAEITET-DKVTSLCSLGG-GRFAYAL----------------- 60 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeC--CcEEEEEecc-cceEEEEEcCC-CEEEEEe-----------------
Confidence 66777665 33 47999999999999983 4566666443 45566665555 4566665
Q ss_pred CcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEE-ccCC---CEEEEEeCCCeEE
Q psy9327 88 PCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF-HHEY---PWILSASDDQTIR 146 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~f-sp~~---~~l~sgs~Dg~I~ 146 (641)
.+|+|-+|+-. ..+...+.... +.++++ ..++ +-|++|-.+|.|-
T Consensus 61 -----------~NGTVGvY~~~--~RlWRiKSK~~-~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 61 -----------ANGTVGVYDRS--QRLWRIKSKNQ-VTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred -----------cCCEEEEEeCc--ceeeeeccCCC-eEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 89999999753 33455554334 445544 4343 3788888888764
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.0089 Score=57.69 Aligned_cols=97 Identities=14% Similarity=0.129 Sum_probs=60.5
Q ss_pred eCCCeEEEEECCCC-eeEEEEccCCCCeEE-EEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCC-CCEEEEEEecC
Q psy9327 98 GDDYKIKVWNYKQR-KCIFTLLGHLDYIRT-TFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN-HYVMCAQFHPT 174 (641)
Q Consensus 98 s~Dg~I~vWD~~t~-~~~~~~~~h~~~V~~-v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~-~~V~sl~fsp~ 174 (641)
+.+|.|.+|+.... .....+..-...|-+ +.--.++.+..+++.|+.|+-|+..-.+.+.....|+ .++..+..+..
T Consensus 77 ~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~s 156 (238)
T KOG2444|consen 77 TSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGS 156 (238)
T ss_pred cccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecC
Confidence 48999999998722 111111111222222 2223345588899999999999998887776666676 45555555555
Q ss_pred CCEEEEE--eCCCeEEEEecCC
Q psy9327 175 DDIVVSA--SLDQTIRVWDISG 194 (641)
Q Consensus 175 g~~lvSg--s~DgtI~IWD~~~ 194 (641)
+..+.++ |.|..++.|++..
T Consensus 157 d~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 157 DEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred CceEEeeccccchhhhhcchhh
Confidence 5666666 6666666666654
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.22 Score=53.69 Aligned_cols=111 Identities=19% Similarity=0.234 Sum_probs=74.2
Q ss_pred EeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-------EEEEEeCCCeEEEEECCCCe--eEEEEccCC---
Q psy9327 96 VLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-------WILSASDDQTIRIWYWQSRN--CICVLTGHN--- 163 (641)
Q Consensus 96 ~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-------~l~sgs~Dg~I~vWd~~~~~--~i~~l~~h~--- 163 (641)
.+.....++-.|++.|+.+..++-|.+ |.-+.+.|+.. .-+.|-+|..|.-||.+-.. .+..-.+|.
T Consensus 351 ~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~ 429 (644)
T KOG2395|consen 351 DGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYST 429 (644)
T ss_pred CCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeecccccc
Confidence 444556788889999999999988777 77778888654 23456678999999987432 222222221
Q ss_pred -CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCcee
Q psy9327 164 -HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLV 208 (641)
Q Consensus 164 -~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v 208 (641)
....|.+-. ..-.|+.||.+|.||+||-...+....+|+.|..|
T Consensus 430 k~nFsc~aTT-~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I 474 (644)
T KOG2395|consen 430 KNNFSCFATT-ESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAI 474 (644)
T ss_pred ccccceeeec-CCceEEEeecCCcEEeehhhhhhhhhcccccCCce
Confidence 123343333 34478899999999999986656666677655443
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.35 Score=47.04 Aligned_cols=136 Identities=13% Similarity=0.138 Sum_probs=91.8
Q ss_pred CCCeEEEEEccCCCeEEEEeCC---------CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 9 SARVKGLSFHPKRPWILSSLHN---------GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~d---------g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
+.+.+.-..+|+|++.+---.| |.++.|-. +..+..+...-+--++++|+.+.+.+..-.
T Consensus 108 knR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~--~h~v~~i~~~v~IsNgl~Wd~d~K~fY~iD--------- 176 (310)
T KOG4499|consen 108 KNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLA--GHQVELIWNCVGISNGLAWDSDAKKFYYID--------- 176 (310)
T ss_pred hcccccCccCCCCceeeeeeccccccccccccEEEEecc--CCCceeeehhccCCccccccccCcEEEEEc---------
Confidence 3455666788999884422222 34444432 223333333344557789998888877776
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEEC--CCC-----eeEEEEcc----CCCCeEEEEEccCCCEEEEEeCCCeEEEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNY--KQR-----KCIFTLLG----HLDYIRTTFFHHEYPWILSASDDQTIRIW 148 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~--~t~-----~~~~~~~~----h~~~V~~v~fsp~~~~l~sgs~Dg~I~vW 148 (641)
+.+.+|.-||+ .+| +.+..++. ..-..-+++...+|.++++.-..++|.-.
T Consensus 177 ------------------sln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~ 238 (310)
T KOG4499|consen 177 ------------------SLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKV 238 (310)
T ss_pred ------------------cCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEE
Confidence 47888988884 444 33443332 11122356667789999999999999999
Q ss_pred ECCCCeeEEEEccCCCCEEEEEEec
Q psy9327 149 YWQSRNCICVLTGHNHYVMCAQFHP 173 (641)
Q Consensus 149 d~~~~~~i~~l~~h~~~V~sl~fsp 173 (641)
|..+++.+.+++-....|+|++|--
T Consensus 239 dp~tGK~L~eiklPt~qitsccFgG 263 (310)
T KOG4499|consen 239 DPTTGKILLEIKLPTPQITSCCFGG 263 (310)
T ss_pred CCCCCcEEEEEEcCCCceEEEEecC
Confidence 9999999999988899999999963
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.31 Score=48.77 Aligned_cols=175 Identities=14% Similarity=0.124 Sum_probs=107.9
Q ss_pred EEccCCCeEEEEeCC-----CcEEEEECccC-cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec-ccCC
Q psy9327 16 SFHPKRPWILSSLHN-----GVIQLWDYRMN-TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES-RNEP 88 (641)
Q Consensus 16 ~fspdg~~Lasg~~d-----g~I~iWD~~~~-~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~-~~~~ 88 (641)
.|||||.+|...-.| |.|-|||.+.+ +.+..|..|.-.-..+.|.+||+.++.+. |.+.+. ....
T Consensus 120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan--------GGIethpdfgR 191 (366)
T COG3490 120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN--------GGIETHPDFGR 191 (366)
T ss_pred ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeC--------CceecccccCc
Confidence 599999999876543 88999998754 44667778887788999999999998875 222221 1111
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEE--Ec--cCCCCeEEEEEccCCCEEEEEeC-----CCeEEEEECCCCeeEEEE
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFT--LL--GHLDYIRTTFFHHEYPWILSASD-----DQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~--~~--~h~~~V~~v~fsp~~~~l~sgs~-----Dg~I~vWd~~~~~~i~~l 159 (641)
...+ ..+..-++.+.|..+|..+.+ +. .+.-.|+.++..+++..++.+-- |.--.+=-...++.+.-+
T Consensus 192 ~~lN---ldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~ 268 (366)
T COG3490 192 TELN---LDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFL 268 (366)
T ss_pred cccc---hhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCccc
Confidence 1111 112455677777777776543 33 35567888888888875444321 111111111223333222
Q ss_pred c-------cCCCCEEEEEEecCCCEEEEEe-CCCeEEEEecCCCceeeec
Q psy9327 160 T-------GHNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 160 ~-------~h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~~~~~~~~ 201 (641)
. +-..+|-+++.+.+..+++..| ..+...+||..++......
T Consensus 269 ~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a 318 (366)
T COG3490 269 DLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEA 318 (366)
T ss_pred CCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEecc
Confidence 1 2356788888887666665544 4557889999998765543
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.076 Score=57.09 Aligned_cols=148 Identities=11% Similarity=0.085 Sum_probs=98.5
Q ss_pred CCCeEE-EEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCC--EEEEeceeeEEeeeceeeecccCCcceeeEEE
Q psy9327 20 KRPWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP--IFVSGGKMIVMAYQGCILESRNEPCLFRIKSV 96 (641)
Q Consensus 20 dg~~La-sg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~--~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (641)
+.++++ ++..-..++--|++.|+.+....-|.. |.-+.+.|+.. .+.+.+ -.+
T Consensus 344 dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~-----------------------Tlv 399 (644)
T KOG2395|consen 344 DSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQ-----------------------TLV 399 (644)
T ss_pred ccceEeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccc-----------------------cEE
Confidence 444444 455556688889999999988877766 66677777644 333221 123
Q ss_pred eeCCCeEEEEECCCC-e-eEEEEccCC----CCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEE
Q psy9327 97 LGDDYKIKVWNYKQR-K-CIFTLLGHL----DYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQ 170 (641)
Q Consensus 97 ~s~Dg~I~vWD~~t~-~-~~~~~~~h~----~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~ 170 (641)
|..|..|.-||.+-. . .+..-++|. ....|.+-. ...+||.||.+|.|++||--..+....+.+-..+|..+.
T Consensus 400 GLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT-~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVd 478 (644)
T KOG2395|consen 400 GLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATT-ESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVD 478 (644)
T ss_pred eecCCceEEecccccCcceeeeeeccccccccccceeeec-CCceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEE
Confidence 348899999998732 2 222223332 122333333 344799999999999999754555566788899999999
Q ss_pred EecCCCEEEEEeCCCeEEEEecC
Q psy9327 171 FHPTDDIVVSASLDQTIRVWDIS 193 (641)
Q Consensus 171 fsp~g~~lvSgs~DgtI~IWD~~ 193 (641)
.+.+|.||+..+. ..+-+-|+.
T Consensus 479 vtadGKwil~Tc~-tyLlLi~t~ 500 (644)
T KOG2395|consen 479 VTADGKWILATCK-TYLLLIDTL 500 (644)
T ss_pred eeccCcEEEEecc-cEEEEEEEe
Confidence 9999999986664 466666653
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.051 Score=39.32 Aligned_cols=34 Identities=18% Similarity=0.255 Sum_probs=30.3
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL 43 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~ 43 (641)
.++|.+++|+|..+++|.|..+|.|.++.+ +++.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 467999999999999999999999999998 5544
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.07 Score=51.65 Aligned_cols=103 Identities=13% Similarity=0.175 Sum_probs=72.4
Q ss_pred CeEEEEeCCCcEEEEECcc-CcccccccccccCeEEEEE-eCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeC
Q psy9327 22 PWILSSLHNGVIQLWDYRM-NTLLEKFDEHEGPVRGICF-HNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGD 99 (641)
Q Consensus 22 ~~Lasg~~dg~I~iWD~~~-~~~l~~~~~h~~~V~~i~f-sp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 99 (641)
.-+++|+.+|.|.+|.+.. +.....+..-..+|-++-- -.++.+..+++ .
T Consensus 71 ~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~----------------------------~ 122 (238)
T KOG2444|consen 71 AKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGA----------------------------Q 122 (238)
T ss_pred ceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEec----------------------------c
Confidence 4588899999999999762 3333333333344443322 22344666665 9
Q ss_pred CCeEEEEECCCCeeEEEEccCC-CCeEEEEEccCCCEEEEE--eCCCeEEEEECCC
Q psy9327 100 DYKIKVWNYKQRKCIFTLLGHL-DYIRTTFFHHEYPWILSA--SDDQTIRIWYWQS 152 (641)
Q Consensus 100 Dg~I~vWD~~t~~~~~~~~~h~-~~V~~v~fsp~~~~l~sg--s~Dg~I~vWd~~~ 152 (641)
||.|+.|++.-++.+.....|. .++.....+..+..++++ |.|..++.|++..
T Consensus 123 dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 123 DGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred CCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 9999999999988888877787 566666677777778887 8888888888764
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=95.19 E-value=4.8 Score=42.03 Aligned_cols=263 Identities=8% Similarity=0.060 Sum_probs=138.2
Q ss_pred CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC
Q psy9327 31 GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ 110 (641)
Q Consensus 31 g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t 110 (641)
+.+.+.|.++++.+-.+.. +-.-.+..+|+++.+.++.....-.-+| -..-.|.+||..+
T Consensus 17 ~rv~viD~d~~k~lGmi~~--g~~~~~~~spdgk~~y~a~T~~sR~~rG------------------~RtDvv~~~D~~T 76 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMIDT--GFLGNVALSPDGKTIYVAETFYSRGTRG------------------ERTDVVEIWDTQT 76 (342)
T ss_dssp EEEEEEETTTTEEEEEEEE--ESSEEEEE-TTSSEEEEEEEEEEETTEE------------------EEEEEEEEEETTT
T ss_pred ceEEEEECCCCcEEEEeec--ccCCceeECCCCCEEEEEEEEEeccccc------------------cceeEEEEEecCc
Confidence 4799999999887776643 3334477899999998875110000011 1344699999999
Q ss_pred CeeEEEEccCC-------CCeEEEEEccCCCEEEEEe--CCCeEEEEECCCCeeEEEEccCCCCEEEEEEecC-CCEEEE
Q psy9327 111 RKCIFTLLGHL-------DYIRTTFFHHEYPWILSAS--DDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT-DDIVVS 180 (641)
Q Consensus 111 ~~~~~~~~~h~-------~~V~~v~fsp~~~~l~sgs--~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~-g~~lvS 180 (641)
-.+...+.--. ......+++.++++++... --.+|.|-|+..++.+..+.-. + |...-|. .+-+.+
T Consensus 77 L~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~P-G---C~~iyP~~~~~F~~ 152 (342)
T PF06433_consen 77 LSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTP-G---CWLIYPSGNRGFSM 152 (342)
T ss_dssp TEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGT-S---EEEEEEEETTEEEE
T ss_pred CcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCC-C---EEEEEecCCCceEE
Confidence 88777543211 1233467888888776643 3567888888888877776522 1 2223343 356888
Q ss_pred EeCCCeEEEEecC-CCceeeecc----CCCceeeecccCCCceee-eeeeeeeCCCeeEEEecCCCcceeeecC------
Q psy9327 181 ASLDQTIRVWDIS-GLRKKNVAP----GMGKLVLSMKSKHPIWKY-CKPVKYCNPKHTLHICNRKMEPLCNIHE------ 248 (641)
Q Consensus 181 gs~DgtI~IWD~~-~~~~~~~~~----~~~~~v~s~~~~~~v~~~-~~~l~s~~~d~~I~i~d~~~~~~~~~~~------ 248 (641)
-|.||++.-..+. .++...... ....++ ..+|.+.- ...+...+..|.|.-.|..+........
T Consensus 153 lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~----f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~ 228 (342)
T PF06433_consen 153 LCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPL----FEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTD 228 (342)
T ss_dssp EETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-----S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-H
T ss_pred EecCCceEEEEECCCCCEeEeeccccCCCCccc----ccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCc
Confidence 9999999988886 444432211 000111 11111110 0012223345555555532222111100
Q ss_pred --------CcceEEEEEcCCccEEEEecC----------CeEEEEEcCCCC-eEeccccc-----eEEEEEcCcEEEEEe
Q psy9327 249 --------NTRVKSGAWDESGVFIYTTSN----------HIKYAIVNGDHG-IIRTLDLP-----IYITKIKGNQVYYLD 304 (641)
Q Consensus 249 --------~~~I~sla~~p~g~~L~t~s~----------~~k~~l~~~~~g-~I~~~d~p-----~~~~~~~g~~v~~~~ 304 (641)
.+.-.-+++++....|+..-. .-.+++++..++ .|+.++++ +.+...+...++.++
T Consensus 229 ~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~~~~Si~Vsqd~~P~L~~~~ 308 (342)
T PF06433_consen 229 AEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEHPIDSIAVSQDDKPLLYALS 308 (342)
T ss_dssp HHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEEEESEEEEESSSS-EEEEEE
T ss_pred cccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCCCccceEEEccCCCcEEEEEc
Confidence 111223566655444443321 224566666555 35555542 233344556777776
Q ss_pred C-CCCeEEEEeCCcchhh
Q psy9327 305 R-ECSPHVLRIDPTEFKF 321 (641)
Q Consensus 305 ~-dg~i~v~~~~~~~~~~ 321 (641)
. ++.+.+++..+++.+-
T Consensus 309 ~~~~~l~v~D~~tGk~~~ 326 (342)
T PF06433_consen 309 AGDGTLDVYDAATGKLVR 326 (342)
T ss_dssp TTTTEEEEEETTT--EEE
T ss_pred CCCCeEEEEeCcCCcEEe
Confidence 5 6788888888766543
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=95.17 E-value=3.1 Score=41.89 Aligned_cols=159 Identities=11% Similarity=-0.037 Sum_probs=97.4
Q ss_pred CCCeEEEEEccCCCeEEEEeCCC--cEEEEECccCcccccccc-cccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNG--VIQLWDYRMNTLLEKFDE-HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg--~I~iWD~~~~~~l~~~~~-h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
+.-..++.|..+|.++-|.|.-| .|+.+|+.+|+.+.+..- ..----+++...+.-+.++=
T Consensus 44 ~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d~l~qLTW---------------- 107 (264)
T PF05096_consen 44 TAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGDKLYQLTW---------------- 107 (264)
T ss_dssp T-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETTEEEEEES----------------
T ss_pred cccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECCEEEEEEe----------------
Confidence 34566788977888888888766 699999999986654431 22233456666554444443
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC---
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH--- 162 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h--- 162 (641)
.++...+||.++.+.+.++. ..+.=.+++ .++..|+.+.....++++|..+-+....+.-.
T Consensus 108 -------------k~~~~f~yd~~tl~~~~~~~-y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g 171 (264)
T PF05096_consen 108 -------------KEGTGFVYDPNTLKKIGTFP-YPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNG 171 (264)
T ss_dssp -------------SSSEEEEEETTTTEEEEEEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETT
T ss_pred -------------cCCeEEEEccccceEEEEEe-cCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECC
Confidence 78999999999999988886 345556777 45566776666889999999887665554321
Q ss_pred --CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeee
Q psy9327 163 --NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNV 200 (641)
Q Consensus 163 --~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~ 200 (641)
-..++-+.|. +|...+-.=....|..-|..+++....
T Consensus 172 ~pv~~LNELE~i-~G~IyANVW~td~I~~Idp~tG~V~~~ 210 (264)
T PF05096_consen 172 RPVSNLNELEYI-NGKIYANVWQTDRIVRIDPETGKVVGW 210 (264)
T ss_dssp EE---EEEEEEE-TTEEEEEETTSSEEEEEETTT-BEEEE
T ss_pred EECCCcEeEEEE-cCEEEEEeCCCCeEEEEeCCCCeEEEE
Confidence 1234455554 454444444455666666666655443
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=94.99 E-value=3.4 Score=41.92 Aligned_cols=118 Identities=11% Similarity=0.120 Sum_probs=82.4
Q ss_pred cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc-CCCCeEE
Q psy9327 48 DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG-HLDYIRT 126 (641)
Q Consensus 48 ~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~-h~~~V~~ 126 (641)
.+-...|.++.|+|+.+.|.+.. +...-.||=-..|+.+.++.- .-...-+
T Consensus 82 ~g~~~nvS~LTynp~~rtLFav~----------------------------n~p~~iVElt~~GdlirtiPL~g~~DpE~ 133 (316)
T COG3204 82 LGETANVSSLTYNPDTRTLFAVT----------------------------NKPAAIVELTKEGDLIRTIPLTGFSDPET 133 (316)
T ss_pred ccccccccceeeCCCcceEEEec----------------------------CCCceEEEEecCCceEEEecccccCChhH
Confidence 34445599999999988887776 566666776677888887642 1122345
Q ss_pred EEEccCCCEEEEEeCCCeEEEEECCCCeeE-------EEEc--cC-CCCEEEEEEecCCCEEEEEeCCCeEEEEecC
Q psy9327 127 TFFHHEYPWILSASDDQTIRIWYWQSRNCI-------CVLT--GH-NHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193 (641)
Q Consensus 127 v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i-------~~l~--~h-~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~ 193 (641)
+.+..++.+.++-=.++.+.++.+...... ..+. .+ +...-.++|.|.+..+..+-+-.-+.|+.+.
T Consensus 134 Ieyig~n~fvi~dER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~ 210 (316)
T COG3204 134 IEYIGGNQFVIVDERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVT 210 (316)
T ss_pred eEEecCCEEEEEehhcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEe
Confidence 778778877777777888888877654211 1121 22 5567789999999888888887777777765
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=94.96 E-value=2.9 Score=42.08 Aligned_cols=105 Identities=14% Similarity=0.124 Sum_probs=73.1
Q ss_pred cCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCC--eEEEEE
Q psy9327 52 GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY--IRTTFF 129 (641)
Q Consensus 52 ~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~--V~~v~f 129 (641)
.+-.+|+|||..+.-+.-.+ -......++|...++...++...++. --.=.|
T Consensus 68 aR~Hgi~~~p~~~ravafAR--------------------------rPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvf 121 (366)
T COG3490 68 ARGHGIAFHPALPRAVAFAR--------------------------RPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVF 121 (366)
T ss_pred cccCCeecCCCCcceEEEEe--------------------------cCCceEEEECCCCCcCcEEEecccCceeeccccc
Confidence 44567899997665444432 13445788999988776666443332 112469
Q ss_pred ccCCCEEEEEeCC-----CeEEEEECCCC-eeEEEEccCCCCEEEEEEecCCCEEEEEe
Q psy9327 130 HHEYPWILSASDD-----QTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTDDIVVSAS 182 (641)
Q Consensus 130 sp~~~~l~sgs~D-----g~I~vWd~~~~-~~i~~l~~h~~~V~sl~fsp~g~~lvSgs 182 (641)
||||.+|...-.| |.|-|||.+.+ +.+..+..|.-....+.+.+||+.++.+.
T Consensus 122 s~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan 180 (366)
T COG3490 122 SPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN 180 (366)
T ss_pred CCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeC
Confidence 9999988776544 67999998854 34567777877788899999999988764
|
|
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=94.18 E-value=9.8 Score=44.71 Aligned_cols=125 Identities=10% Similarity=0.025 Sum_probs=71.7
Q ss_pred CCeEEEEeCCCcEEEEECccCcccccccccccC--------eEEEEEeCC--CCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 21 RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGP--------VRGICFHNQ--QPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 21 g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~--------V~~i~fsp~--~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
+..+..++.++.|.-.|..+|+.+.+++..... .+++++... +. ... .+.. ....+
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~--~~~----------~~~~-~p~~~- 259 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAA--AGP----------AAPA-APADC- 259 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCccc--ccc----------cccc-ccccc-
Confidence 557788888899999999999998887643221 223333211 00 000 0000 00000
Q ss_pred eeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeE-------------EEEEcc--CCCEEEEEeC----------CCeE
Q psy9327 91 FRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIR-------------TTFFHH--EYPWILSASD----------DQTI 145 (641)
Q Consensus 91 ~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~-------------~v~fsp--~~~~l~sgs~----------Dg~I 145 (641)
......++.|+.+.-.|.++|+....|. ..+.|. ...-.| .+..++.|+. +|.|
T Consensus 260 ~~rV~~~T~Dg~LiALDA~TGk~~W~fg-~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I 338 (764)
T TIGR03074 260 ARRIILPTSDARLIALDADTGKLCEDFG-NNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVI 338 (764)
T ss_pred CCEEEEecCCCeEEEEECCCCCEEEEec-CCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEE
Confidence 0122233489999999999999988774 222221 111112 1334555542 6889
Q ss_pred EEEECCCCeeEEEEc
Q psy9327 146 RIWYWQSRNCICVLT 160 (641)
Q Consensus 146 ~vWd~~~~~~i~~l~ 160 (641)
+-+|.++++.+-.+.
T Consensus 339 ~A~Da~TGkl~W~~~ 353 (764)
T TIGR03074 339 RAFDVNTGALVWAWD 353 (764)
T ss_pred EEEECCCCcEeeEEe
Confidence 999999999887765
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.16 Score=36.76 Aligned_cols=32 Identities=22% Similarity=0.426 Sum_probs=28.9
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecC
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~ 193 (641)
....|.+++|+|..++++.|+.||.|.++.++
T Consensus 10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 34579999999999999999999999999983
|
|
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.025 Score=63.96 Aligned_cols=151 Identities=17% Similarity=0.253 Sum_probs=94.6
Q ss_pred CeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEE-----------EeCCCCEEEEeceeeEEeeec
Q psy9327 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC-----------FHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~-----------fsp~~~~l~sgs~~~~~~~~~ 79 (641)
.|..+-|-++..++..+..+|+|++..+.... ...|.+|+..+..++ .||||..|+.+.
T Consensus 185 ~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~-~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~--------- 254 (1283)
T KOG1916|consen 185 LVSWCPIAVNKVYICYGLKGGEIRLLNINRAL-RSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAI--------- 254 (1283)
T ss_pred eeeecccccccceeeeccCCCceeEeeechHH-HHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEee---------
Confidence 34444455577788888899999988876543 255666877766654 478888888876
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECC-----CCeeEEEEccCCC-CeEEEEEccCCC---------EEEEEeC-CC
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYK-----QRKCIFTLLGHLD-YIRTTFFHHEYP---------WILSASD-DQ 143 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~-----t~~~~~~~~~h~~-~V~~v~fsp~~~---------~l~sgs~-Dg 143 (641)
.||.++.|.+. .-+|++..+.|++ +-.|.-|+.+.. +.+++++ ..
T Consensus 255 -------------------~dG~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nr 315 (1283)
T KOG1916|consen 255 -------------------SDGSVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNR 315 (1283)
T ss_pred -------------------cCCccceeeeeeeccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCc
Confidence 78877777642 3356777788884 333333544321 3455554 45
Q ss_pred eEEEEECCCCeeEEEEccCCCCEEEEEEecCCC------------EEEEEeCCCeEEEEecC
Q psy9327 144 TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD------------IVVSASLDQTIRVWDIS 193 (641)
Q Consensus 144 ~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~------------~lvSgs~DgtI~IWD~~ 193 (641)
.+++|.....+|+ +...-+.|..+. -|++. .+++-+-|++|.+|--+
T Consensus 316 e~k~w~~a~w~Cl--l~~~~d~v~iV~-p~~~~v~~~~~~~~~~~~~v~r~v~~~i~~~qn~ 374 (1283)
T KOG1916|consen 316 EEKFWAEAPWQCL--LDKLIDGVQIVG-PHDGEVTDLSMCQWMTTRLVSRSVDGTIKIWQNR 374 (1283)
T ss_pred ceeEeeccchhhh--hhhcccceEeec-CCCccccchhhhHHHHHHHHHhhhHHHHHHhhcc
Confidence 7999998877776 222234444444 22222 24556778899998543
|
|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=93.97 E-value=1.7 Score=46.51 Aligned_cols=144 Identities=10% Similarity=0.069 Sum_probs=82.2
Q ss_pred CCeEEEEEccCCCeEEEEe-----------CCC-cEEEEECcc--Cc--ccccccccccCeEEEEEeCCCCEEEEeceee
Q psy9327 10 ARVKGLSFHPKRPWILSSL-----------HNG-VIQLWDYRM--NT--LLEKFDEHEGPVRGICFHNQQPIFVSGGKMI 73 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~-----------~dg-~I~iWD~~~--~~--~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~ 73 (641)
.....|+|.++|+++++-. ..+ .|.+++-.. |+ ....|...-....+++|.+++ .+++.
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV~~---- 88 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYVAT---- 88 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEEeC----
Confidence 4567899999999777653 223 787776443 32 223443344456889999998 55543
Q ss_pred EEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC-------CeeE-EEEcc----CCCCeEEEEEccCCCEEEEEeC
Q psy9327 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ-------RKCI-FTLLG----HLDYIRTTFFHHEYPWILSASD 141 (641)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t-------~~~~-~~~~~----h~~~V~~v~fsp~~~~l~sgs~ 141 (641)
.+...++.|... .+.+ ..+.. +......++|.|+|.+.++-+.
T Consensus 89 -------------------------~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~ 143 (367)
T TIGR02604 89 -------------------------PPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGN 143 (367)
T ss_pred -------------------------CCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEeccc
Confidence 232222334321 1112 22322 2345778999999987665552
Q ss_pred C-------------------CeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCC
Q psy9327 142 D-------------------QTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLD 184 (641)
Q Consensus 142 D-------------------g~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~D 184 (641)
. +.|.-+|...++....-.++ .....++|+|+|.++++-..+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~~e~~a~G~-rnp~Gl~~d~~G~l~~tdn~~ 204 (367)
T TIGR02604 144 TLASKVTRPGTSDESRQGLGGGLFRYNPDGGKLRVVAHGF-QNPYGHSVDSWGDVFFCDNDD 204 (367)
T ss_pred CCCceeccCCCccCcccccCceEEEEecCCCeEEEEecCc-CCCccceECCCCCEEEEccCC
Confidence 1 44555565554432222232 335689999999887764433
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=93.79 E-value=3.4 Score=47.06 Aligned_cols=143 Identities=12% Similarity=0.056 Sum_probs=78.1
Q ss_pred CCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEe------CCC--eEEEEECCCCeeEEEEccCCCCEEEEEE
Q psy9327 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS------DDQ--TIRIWYWQSRNCICVLTGHNHYVMCAQF 171 (641)
Q Consensus 100 Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs------~Dg--~I~vWd~~~~~~i~~l~~h~~~V~sl~f 171 (641)
+|.+.-.+-..-.++.-..+....+...+++|++..++... .|+ .+.+++.. +.......+. ..+.-.|
T Consensus 328 ~G~l~~~~~~~~~pv~g~~g~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~~~lt~g~--~~t~PsW 404 (591)
T PRK13616 328 DGSLVSVDGQGVTPVPGAFGQMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVAVQVLEGH--SLTRPSW 404 (591)
T ss_pred CCeEEEecCCCeeeCCCccccccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-CcceeeecCC--CCCCceE
Confidence 55554443222223322223334678899999999877655 244 45555642 2222222332 3778899
Q ss_pred ecCCCEEEEEeCC-CeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCc
Q psy9327 172 HPTDDIVVSASLD-QTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENT 250 (641)
Q Consensus 172 sp~g~~lvSgs~D-gtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~ 250 (641)
+|+|.++.+.+.. ..+++.+-.. .+.+.+.+........ ....
T Consensus 405 spDG~~lw~v~dg~~~~~v~~~~~-----------------------------------~gql~~~~vd~ge~~~-~~~g 448 (591)
T PRK13616 405 SLDADAVWVVVDGNTVVRVIRDPA-----------------------------------TGQLARTPVDASAVAS-RVPG 448 (591)
T ss_pred CCCCCceEEEecCcceEEEeccCC-----------------------------------CceEEEEeccCchhhh-ccCC
Confidence 9999988887654 2233332211 1111111111111111 2345
Q ss_pred ceEEEEEcCCccEEEEecCCeEEEE---EcCCCCe
Q psy9327 251 RVKSGAWDESGVFIYTTSNHIKYAI---VNGDHGI 282 (641)
Q Consensus 251 ~I~sla~~p~g~~L~t~s~~~k~~l---~~~~~g~ 282 (641)
.|.++.|+|||..++.... +++++ ...++|.
T Consensus 449 ~Issl~wSpDG~RiA~i~~-g~v~Va~Vvr~~~G~ 482 (591)
T PRK13616 449 PISELQLSRDGVRAAMIIG-GKVYLAVVEQTEDGQ 482 (591)
T ss_pred CcCeEEECCCCCEEEEEEC-CEEEEEEEEeCCCCc
Confidence 6999999999999887764 56765 4455564
|
|
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=93.63 E-value=13 Score=40.42 Aligned_cols=145 Identities=13% Similarity=0.111 Sum_probs=86.4
Q ss_pred CCCeEEEEeCCCcEEEEECccCccc--cc-cc-ccccCeEEEEEeC-----CCCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNTLL--EK-FD-EHEGPVRGICFHN-----QQPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~~l--~~-~~-~h~~~V~~i~fsp-----~~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
+...+++|+.+|.++||+...+..- .. ++ .-..||..++.-+ +...|++-
T Consensus 36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVL--------------------- 94 (418)
T PF14727_consen 36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVL--------------------- 94 (418)
T ss_pred CccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEe---------------------
Confidence 3458999999999999997443211 11 11 2356888887542 22234443
Q ss_pred eeeEEEeeCCCeEEEEECCC--Ce-------eEEEEccCCC--CeEEEEEcc----C-CCEEEEEeCCCeEEEEECCCCe
Q psy9327 91 FRIKSVLGDDYKIKVWNYKQ--RK-------CIFTLLGHLD--YIRTTFFHH----E-YPWILSASDDQTIRIWYWQSRN 154 (641)
Q Consensus 91 ~~~~~~~s~Dg~I~vWD~~t--~~-------~~~~~~~h~~--~V~~v~fsp----~-~~~l~sgs~Dg~I~vWd~~~~~ 154 (641)
+-..+.||.+.. |. .+..+..|.- ....++.-| . ..+++.=+.||++.+++-+.-.
T Consensus 95 --------hP~kl~vY~v~~~~g~~~~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~ 166 (418)
T PF14727_consen 95 --------HPRKLSVYSVSLVDGTVEHGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFA 166 (418)
T ss_pred --------cCCEEEEEEEEecCCCcccCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEE
Confidence 566677776521 11 1222222322 122233222 2 3588899999999999965443
Q ss_pred eEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 155 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 155 ~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
-...+.+ .--.-.+.|.|.-+.+++++.+..+.-|..+.
T Consensus 167 f~~~lp~-~llPgPl~Y~~~tDsfvt~sss~~l~~Yky~~ 205 (418)
T PF14727_consen 167 FSRFLPD-FLLPGPLCYCPRTDSFVTASSSWTLECYKYQD 205 (418)
T ss_pred EEEEcCC-CCCCcCeEEeecCCEEEEecCceeEEEecHHH
Confidence 3333332 22234578888899999999999999887643
|
|
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=93.56 E-value=1.8 Score=48.98 Aligned_cols=93 Identities=14% Similarity=0.198 Sum_probs=66.5
Q ss_pred eCCCeEEEEECCCCeeEEEEc-cCCCCeEEEEEc--cCCCEEEEEeCCCeEEEEECC-----CC----eeEEEE--ccCC
Q psy9327 98 GDDYKIKVWNYKQRKCIFTLL-GHLDYIRTTFFH--HEYPWILSASDDQTIRIWYWQ-----SR----NCICVL--TGHN 163 (641)
Q Consensus 98 s~Dg~I~vWD~~t~~~~~~~~-~h~~~V~~v~fs--p~~~~l~sgs~Dg~I~vWd~~-----~~----~~i~~l--~~h~ 163 (641)
+...++.|||.+.+.....-. ...+.|.++.|. |+++.+++.|....|.++.-. .. ..+..+ ..|+
T Consensus 48 ~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T 127 (631)
T PF12234_consen 48 SSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHT 127 (631)
T ss_pred CCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeecCC
Confidence 367789999999887544322 457899999986 588899999999999998531 11 123222 3444
Q ss_pred -CCEEEEEEecCCCEEEEEeCCCeEEEEec
Q psy9327 164 -HYVMCAQFHPTDDIVVSASLDQTIRVWDI 192 (641)
Q Consensus 164 -~~V~sl~fsp~g~~lvSgs~DgtI~IWD~ 192 (641)
++|.+..|.++|.+++.++ ..+.|+|-
T Consensus 128 ~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk 155 (631)
T PF12234_consen 128 PHPIGDSIWLKDGTLVVGSG--NQLFVFDK 155 (631)
T ss_pred CCCccceeEecCCeEEEEeC--CEEEEECC
Confidence 6799999999998776553 46778874
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=93.27 E-value=0.048 Score=61.86 Aligned_cols=162 Identities=12% Similarity=0.150 Sum_probs=100.2
Q ss_pred ccCCCCeEEEEEcc-CCCeEEEEeCCCcEEEEECc--cCccccccc-----ccccCeEEEEEeC---CCCEEEEeceeeE
Q psy9327 6 ETKSARVKGLSFHP-KRPWILSSLHNGVIQLWDYR--MNTLLEKFD-----EHEGPVRGICFHN---QQPIFVSGGKMIV 74 (641)
Q Consensus 6 ~~H~~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~--~~~~l~~~~-----~h~~~V~~i~fsp---~~~~l~sgs~~~~ 74 (641)
+|-.+.|-.+.|-. +.+.++ -.-|...+||++ .|+....+. .....+.-+.|.| +..++..+.
T Consensus 129 kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~---- 202 (1283)
T KOG1916|consen 129 KGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGL---- 202 (1283)
T ss_pred hcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeecc----
Confidence 45567777777753 333333 334678899875 354433332 2233445556654 444555554
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEE-----------EccCCCEEEEEeCCC
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTF-----------FHHEYPWILSASDDQ 143 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~-----------fsp~~~~l~sgs~Dg 143 (641)
.+++|++.++++... ..|.+|...+..++ .+|||..|+.++.||
T Consensus 203 ------------------------~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG 257 (1283)
T KOG1916|consen 203 ------------------------KGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDG 257 (1283)
T ss_pred ------------------------CCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCC
Confidence 788998888765432 33445665554443 589999999999999
Q ss_pred eEEEEEC-----CCCeeEEEEccCC-CCEEEEEEecCC-------C--EEEEEeC-CCeEEEEecCCCcee
Q psy9327 144 TIRIWYW-----QSRNCICVLTGHN-HYVMCAQFHPTD-------D--IVVSASL-DQTIRVWDISGLRKK 198 (641)
Q Consensus 144 ~I~vWd~-----~~~~~i~~l~~h~-~~V~sl~fsp~g-------~--~lvSgs~-DgtI~IWD~~~~~~~ 198 (641)
.++.|.+ ...+|++..+.|. ++-.|.-|+.+. . +++++++ ...+++|....++|.
T Consensus 258 ~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 258 SVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL 328 (1283)
T ss_pred ccceeeeeeeccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence 9888865 3456778888887 444444455422 1 3445444 557999998887776
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=93.08 E-value=4.7 Score=40.95 Aligned_cols=161 Identities=11% Similarity=0.106 Sum_probs=103.4
Q ss_pred ccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccc-cccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDE-HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~-h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
.|-.+-|.++.|+|+.+.|.+-...+.-.+|=-..|+.++++.- --..-.+|++..++.+.++--
T Consensus 82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dE-------------- 147 (316)
T COG3204 82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDE-------------- 147 (316)
T ss_pred ccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEeh--------------
Confidence 34445599999999999888888777777777778888887642 122334577777776666654
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEE-------EEc--cC-CCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIF-------TLL--GH-LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN 154 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~-------~~~--~h-~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~ 154 (641)
.++.+.+..+.....+. .+. .+ +...-+++|.|.+..|..+=.-.-+.|+.+....
T Consensus 148 --------------R~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~ 213 (316)
T COG3204 148 --------------RDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSP 213 (316)
T ss_pred --------------hcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCC
Confidence 67777777665442211 111 12 5677899999998888888777766666654322
Q ss_pred -e--EEEEccC-------CCCEEEEEEecC-CCEEEEEeCCCeEEEEecCC
Q psy9327 155 -C--ICVLTGH-------NHYVMCAQFHPT-DDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 155 -~--i~~l~~h-------~~~V~sl~fsp~-g~~lvSgs~DgtI~IWD~~~ 194 (641)
. ......+ -..|.++.|++. +.+++-+.+++.+.-.|...
T Consensus 214 ~~l~~~~~~~~~~~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~G 264 (316)
T COG3204 214 SSLSVHASLDPTADRDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDLSG 264 (316)
T ss_pred cccccccccCcccccceEeeccccceecCCCCcEEEEecCCceEEEEecCC
Confidence 1 1111112 123677888874 56666666777777777655
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=92.97 E-value=0.93 Score=51.43 Aligned_cols=102 Identities=7% Similarity=-0.021 Sum_probs=57.5
Q ss_pred CeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC------CeEEEEECCC-Ce--eEEEEccCCCCEEEEEE
Q psy9327 101 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD------QTIRIWYWQS-RN--CICVLTGHNHYVMCAQF 171 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D------g~I~vWd~~~-~~--~i~~l~~h~~~V~sl~f 171 (641)
..+..||..+.+....-.-........+..-++...+.||.+ ..+..||..+ .+ .+..+.........+.+
T Consensus 432 ~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~ 511 (557)
T PHA02713 432 NKVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH 511 (557)
T ss_pred ceEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE
Confidence 458889988775432211111111111222346667777654 2467899886 33 23333333333333333
Q ss_pred ecCCCEEEEEeCCC--eEEEEecCCCceeeeccCC
Q psy9327 172 HPTDDIVVSASLDQ--TIRVWDISGLRKKNVAPGM 204 (641)
Q Consensus 172 sp~g~~lvSgs~Dg--tI~IWD~~~~~~~~~~~~~ 204 (641)
++.+.+.|+.|+ ++-.||..+.+-....+.|
T Consensus 512 --~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~~~~~ 544 (557)
T PHA02713 512 --DNTIMMLHCYESYMLQDTFNVYTYEWNHICHQH 544 (557)
T ss_pred --CCEEEEEeeecceeehhhcCcccccccchhhhc
Confidence 688889999888 7888888876665555544
|
|
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=92.91 E-value=5.4 Score=42.07 Aligned_cols=150 Identities=8% Similarity=-0.009 Sum_probs=85.8
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEE-EECccCcccccc-cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeeccc
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQL-WDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRN 86 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~i-WD~~~~~~l~~~-~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~ 86 (641)
...+.++.+.|++.++++|. .|.+.. +| ..++..... ..-...++++.+.++++.+++|
T Consensus 172 ~g~~~~i~~~~~g~~v~~g~-~G~i~~s~~-~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg----------------- 232 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVSS-RGNFYSTWE-PGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA----------------- 232 (334)
T ss_pred cceEEEEEECCCCeEEEEeC-CceEEEEcC-CCCCeEEEeeCCCcccceeeeEcCCCCEEEEe-----------------
Confidence 35688999999987666554 565542 22 122222222 1234678999999999988877
Q ss_pred CCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc----CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc--
Q psy9327 87 EPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG----HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT-- 160 (641)
Q Consensus 87 ~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~----h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~-- 160 (641)
..|.+.+=.-..|..-..... -...+.++.|++++..++ ++.+|.+. .....++......
T Consensus 233 ------------~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~-~G~~G~v~-~S~d~G~tW~~~~~~ 298 (334)
T PRK13684 233 ------------RGGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPGEIWA-GGGNGTLL-VSKDGGKTWEKDPVG 298 (334)
T ss_pred ------------cCCEEEEccCCCCCccccccCCccccccceeeEEEcCCCCEEE-EcCCCeEE-EeCCCCCCCeECCcC
Confidence 456554322333322111111 123477889999877554 55567664 3444444443332
Q ss_pred -cCCCCEEEEEEecCCCEEEEEeCCCeEEEEec
Q psy9327 161 -GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192 (641)
Q Consensus 161 -~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~ 192 (641)
+-......+.|..++..++ .+..|.|..|+-
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~-~G~~G~il~~~~ 330 (334)
T PRK13684 299 EEVPSNFYKIVFLDPEKGFV-LGQRGVLLRYVG 330 (334)
T ss_pred CCCCcceEEEEEeCCCceEE-ECCCceEEEecC
Confidence 2223577788776666655 566788877753
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=92.64 E-value=15 Score=38.47 Aligned_cols=237 Identities=9% Similarity=0.074 Sum_probs=130.8
Q ss_pred EEEEccCCCeEEEEeC----------CCcEEEEECccCcccccccccc-------cCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 14 GLSFHPKRPWILSSLH----------NGVIQLWDYRMNTLLEKFDEHE-------GPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 14 ~l~fspdg~~Lasg~~----------dg~I~iWD~~~~~~l~~~~~h~-------~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
.+..+|+++.++++.. +-.|.+||..+-+....+.-.. .....++++.++++++...-
T Consensus 40 ~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~----- 114 (342)
T PF06433_consen 40 NVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNF----- 114 (342)
T ss_dssp EEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEE-----
T ss_pred ceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEcc-----
Confidence 4668999998886532 3459999998776544332111 12233578889998887651
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC-CCee
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ-SRNC 155 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~-~~~~ 155 (641)
+.-.+|.|-|+..++.+.++.- ..+..+--.++ .-|.+-|.||++.-..+. .|+.
T Consensus 115 ---------------------TPa~SVtVVDl~~~kvv~ei~~--PGC~~iyP~~~-~~F~~lC~DGsl~~v~Ld~~Gk~ 170 (342)
T PF06433_consen 115 ---------------------TPATSVTVVDLAAKKVVGEIDT--PGCWLIYPSGN-RGFSMLCGDGSLLTVTLDADGKE 170 (342)
T ss_dssp ---------------------SSSEEEEEEETTTTEEEEEEEG--TSEEEEEEEET-TEEEEEETTSCEEEEEETSTSSE
T ss_pred ---------------------CCCCeEEEEECCCCceeeeecC--CCEEEEEecCC-CceEEEecCCceEEEEECCCCCE
Confidence 3567899999999998887752 22222322222 358888889999888887 4443
Q ss_pred EEE----EccCCCCEE-EEEEecCCCEEEEEeCCCeEEEEecCCCceeee--ccC------------CCceeeecc-cCC
Q psy9327 156 ICV----LTGHNHYVM-CAQFHPTDDIVVSASLDQTIRVWDISGLRKKNV--APG------------MGKLVLSMK-SKH 215 (641)
Q Consensus 156 i~~----l~~h~~~V~-sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~--~~~------------~~~~v~s~~-~~~ 215 (641)
..+ |..-.+++. .-++...+..++--|.+|.|+--|+......-. +.- -|-.+.... ..+
T Consensus 171 ~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~ 250 (342)
T PF06433_consen 171 AQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASG 250 (342)
T ss_dssp EEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTT
T ss_pred eEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccC
Confidence 322 222223222 233444555555578888888888876542111 000 000000000 111
Q ss_pred CceeeeeeeeeeC------CCeeEEEec-CCCcceeeecCCcceEEEEEcCCc-cEEEEec-CCeEEEEEcCCCCe
Q psy9327 216 PIWKYCKPVKYCN------PKHTLHICN-RKMEPLCNIHENTRVKSGAWDESG-VFIYTTS-NHIKYAIVNGDHGI 282 (641)
Q Consensus 216 ~v~~~~~~l~s~~------~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g-~~L~t~s-~~~k~~l~~~~~g~ 282 (641)
..+-. +-.+. ....|.++| .+.+.+..++-..++.+++.+.+. ..|++.+ .++.+.+++..+|.
T Consensus 251 rlyvL---Mh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk 323 (342)
T PF06433_consen 251 RLYVL---MHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGK 323 (342)
T ss_dssp EEEEE---EEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--
T ss_pred eEEEE---ecCCCCCCccCCceEEEEEECCCCeEEEEEeCCCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCc
Confidence 11110 00111 123456666 667777777766778888888664 4666554 57788888887765
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=92.52 E-value=4.7 Score=41.75 Aligned_cols=151 Identities=9% Similarity=0.028 Sum_probs=77.7
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
-.+.+..+..++||.++++++.-....-||--...-...-..-+.+|..+.|.|++.+.+.+
T Consensus 143 ~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~------------------ 204 (302)
T PF14870_consen 143 TSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA------------------ 204 (302)
T ss_dssp ----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE------------------
T ss_pred CcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe------------------
Confidence 34678899999999999888765556678743211111112346799999999998876665
Q ss_pred CcceeeEEEeeCCCeEEEEECC-CCeeEEE--Ecc-CCC-CeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc--
Q psy9327 88 PCLFRIKSVLGDDYKIKVWNYK-QRKCIFT--LLG-HLD-YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT-- 160 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg~I~vWD~~-t~~~~~~--~~~-h~~-~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~-- 160 (641)
..|.|+.=+.. ....-.. ... -.+ .+..++|.+++...++|+. |++ +.....++.-..-+
T Consensus 205 -----------~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~-G~l-~~S~DgGktW~~~~~~ 271 (302)
T PF14870_consen 205 -----------RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGS-GTL-LVSTDGGKTWQKDRVG 271 (302)
T ss_dssp -----------TTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-EEEEEST-T-E-EEESSTTSS-EE-GGG
T ss_pred -----------CCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCCCEEEEeCC-ccE-EEeCCCCccceECccc
Confidence 57777777621 1111111 111 122 3788999999887776664 444 33445555444443
Q ss_pred -cCCCCEEEEEEecCCCEEEEEeCCCeEEEE
Q psy9327 161 -GHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190 (641)
Q Consensus 161 -~h~~~V~sl~fsp~g~~lvSgs~DgtI~IW 190 (641)
.-......+.|.+...-++ .+.+|.+.-|
T Consensus 272 ~~~~~n~~~i~f~~~~~gf~-lG~~G~ll~~ 301 (302)
T PF14870_consen 272 ENVPSNLYRIVFVNPDKGFV-LGQDGVLLRY 301 (302)
T ss_dssp TTSSS---EEEEEETTEEEE-E-STTEEEEE
T ss_pred cCCCCceEEEEEcCCCceEE-ECCCcEEEEe
Confidence 2244577888876544444 4567777655
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=92.51 E-value=17 Score=38.77 Aligned_cols=149 Identities=12% Similarity=0.127 Sum_probs=77.0
Q ss_pred EEccCCCeEEEEeC-CCc--EEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCccee
Q psy9327 16 SFHPKRPWILSSLH-NGV--IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFR 92 (641)
Q Consensus 16 ~fspdg~~Lasg~~-dg~--I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~ 92 (641)
+|.+||+.|+.++. ||. +.+-|+.+++...--++......+..++|+++.++-..
T Consensus 42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~---------------------- 99 (386)
T PF14583_consen 42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVK---------------------- 99 (386)
T ss_dssp -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEE----------------------
T ss_pred CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEE----------------------
Confidence 46778876665554 554 55567777754332222222233566778888765543
Q ss_pred eEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEc--cCCCEEEEEe---C-------------------CCeEEEE
Q psy9327 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH--HEYPWILSAS---D-------------------DQTIRIW 148 (641)
Q Consensus 93 ~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fs--p~~~~l~sgs---~-------------------Dg~I~vW 148 (641)
.+..++-.|+++.+....+....+.+-...|. .++..++-.- . ...|.--
T Consensus 100 ------~~~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~i 173 (386)
T PF14583_consen 100 ------NGRSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTI 173 (386)
T ss_dssp ------TTTEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEE
T ss_pred ------CCCeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEE
Confidence 56688999999988766666666666555554 3455443221 1 1235556
Q ss_pred ECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCC-----eEEEEecC
Q psy9327 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQ-----TIRVWDIS 193 (641)
Q Consensus 149 d~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~Dg-----tI~IWD~~ 193 (641)
|+++++....+. -...+..+.|+|..+.++.=+..| .-|||-++
T Consensus 174 dl~tG~~~~v~~-~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~ 222 (386)
T PF14583_consen 174 DLKTGERKVVFE-DTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTIN 222 (386)
T ss_dssp ETTT--EEEEEE-ESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEE
T ss_pred ECCCCceeEEEe-cCccccCcccCCCCCCEEEEeccCCcceeceEEEEEE
Confidence 777776544443 456678899999776655544332 24777664
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=92.50 E-value=6.5 Score=39.68 Aligned_cols=146 Identities=8% Similarity=-0.060 Sum_probs=87.5
Q ss_pred CeEEEEEccCCCeEEEEe-CCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 11 RVKGLSFHPKRPWILSSL-HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~-~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
.+.+.++++++..+|.-. .++.-.||-...+....... ....+..-.|++++...+...
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~-~g~~l~~PS~d~~g~~W~v~~------------------- 84 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVL-TGGSLTRPSWDPDGWVWTVDD------------------- 84 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeec-cCCccccccccCCCCEEEEEc-------------------
Confidence 688999999999777655 23334444444443333332 223777789999976555554
Q ss_pred ceeeEEEeeCCCeEEEE-ECCCCeeEE-EEcc--CCCCeEEEEEccCCCEEEEEe---CCCeEEEEECC---CC------
Q psy9327 90 LFRIKSVLGDDYKIKVW-NYKQRKCIF-TLLG--HLDYIRTTFFHHEYPWILSAS---DDQTIRIWYWQ---SR------ 153 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vW-D~~t~~~~~-~~~~--h~~~V~~v~fsp~~~~l~sgs---~Dg~I~vWd~~---~~------ 153 (641)
.+...+++ +-.+++... .... -.+.|..+.++|||..++.-. .++.|.+=-+. .+
T Consensus 85 ---------~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~ 155 (253)
T PF10647_consen 85 ---------GSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLT 155 (253)
T ss_pred ---------CCCceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceec
Confidence 45555555 333332221 1211 122899999999999776554 45777776442 22
Q ss_pred eeEEEEccCCCCEEEEEEecCCCEEEEEeCCC
Q psy9327 154 NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQ 185 (641)
Q Consensus 154 ~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~Dg 185 (641)
............++.+.|.+++.+++.+...+
T Consensus 156 ~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~~ 187 (253)
T PF10647_consen 156 GPRRVAPPLLSDVTDVAWSDDSTLVVLGRSAG 187 (253)
T ss_pred cceEecccccCcceeeeecCCCEEEEEeCCCC
Confidence 11222233456889999999998877666543
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=91.50 E-value=17 Score=41.30 Aligned_cols=146 Identities=10% Similarity=0.021 Sum_probs=79.0
Q ss_pred cCCCeEEEEeCCC------cEEEEECccCcc--cccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 19 PKRPWILSSLHNG------VIQLWDYRMNTL--LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 19 pdg~~Lasg~~dg------~I~iWD~~~~~~--l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
..+.+++.||.++ .+..+|..+++- +..+. +...-.+++... +...++||
T Consensus 283 ~~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~-~~r~~~~~~~~~-~~lYv~GG-------------------- 340 (571)
T KOG4441|consen 283 VSGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMP-SPRCRVGVAVLN-GKLYVVGG-------------------- 340 (571)
T ss_pred CCCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCC-cccccccEEEEC-CEEEEEcc--------------------
Confidence 3466778888774 577888776632 22222 222334455544 35666776
Q ss_pred eeeEEEeeCC------CeEEEEECCCCeeEEE--EccCCCCeEEEEEccCCCEEEEEeCCCe-----EEEEECCCCeeEE
Q psy9327 91 FRIKSVLGDD------YKIKVWNYKQRKCIFT--LLGHLDYIRTTFFHHEYPWILSASDDQT-----IRIWYWQSRNCIC 157 (641)
Q Consensus 91 ~~~~~~~s~D------g~I~vWD~~t~~~~~~--~~~h~~~V~~v~fsp~~~~l~sgs~Dg~-----I~vWd~~~~~~i~ 157 (641)
.| .++..||..+++.... +.........+ .-+|...|+||.||. |-.||..+.+.-.
T Consensus 341 --------~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~--~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~ 410 (571)
T KOG4441|consen 341 --------YDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVA--VLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTP 410 (571)
T ss_pred --------ccCCCcccceEEEecCCCCceeccCCccCccccceeE--EECCEEEEEeccccccccccEEEecCCCCcccc
Confidence 44 4688888877764331 11111111111 226788899999864 7778877654221
Q ss_pred EEccCCCCEEEE-EEecCCCEEEEEeCCC------eEEEEecCCCce
Q psy9327 158 VLTGHNHYVMCA-QFHPTDDIVVSASLDQ------TIRVWDISGLRK 197 (641)
Q Consensus 158 ~l~~h~~~V~sl-~fsp~g~~lvSgs~Dg------tI~IWD~~~~~~ 197 (641)
.- .......+. .-.-+|.+.+.|+.|+ ++..||..+.+.
T Consensus 411 va-~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W 456 (571)
T KOG4441|consen 411 VA-PMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTW 456 (571)
T ss_pred cC-CCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCce
Confidence 11 111111111 1122678888888654 567777766544
|
|
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=91.12 E-value=19 Score=36.42 Aligned_cols=121 Identities=7% Similarity=-0.019 Sum_probs=76.5
Q ss_pred cCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCC-CCeEEEEEc
Q psy9327 52 GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL-DYIRTTFFH 130 (641)
Q Consensus 52 ~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~-~~V~~v~fs 130 (641)
.-..++.|..++.++-+.|.. ....|+.+|+.+|+......-.. --=-+++..
T Consensus 45 aFTQGL~~~~~g~LyESTG~y--------------------------G~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~ 98 (264)
T PF05096_consen 45 AFTQGLEFLDDGTLYESTGLY--------------------------GQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL 98 (264)
T ss_dssp -EEEEEEEEETTEEEEEECST--------------------------TEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE
T ss_pred ccCccEEecCCCEEEEeCCCC--------------------------CcEEEEEEECCCCcEEEEEECCccccceeEEEE
Confidence 446688887777777777610 23479999999998766543222 122334444
Q ss_pred cCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 131 HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 131 p~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
. +....-.=.++...+||..+-+.+.++. ..+.=..++ .++..|+.......++++|..+.+....+.
T Consensus 99 ~-d~l~qLTWk~~~~f~yd~~tl~~~~~~~-y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~ 166 (264)
T PF05096_consen 99 G-DKLYQLTWKEGTGFVYDPNTLKKIGTFP-YPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQ 166 (264)
T ss_dssp T-TEEEEEESSSSEEEEEETTTTEEEEEEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE
T ss_pred C-CEEEEEEecCCeEEEEccccceEEEEEe-cCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEE
Confidence 3 3445556678999999999998888875 233445555 456666666667799999998877666553
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=90.73 E-value=37 Score=39.62 Aligned_cols=116 Identities=9% Similarity=0.067 Sum_probs=70.0
Q ss_pred cCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc
Q psy9327 52 GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131 (641)
Q Consensus 52 ~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp 131 (641)
-.+..+.|+|++++|+.+.+ ..|+....|++-|+.+|..+...-.... ..++|++
T Consensus 127 ~~l~~~~~Spdg~~la~~~d-----------------------~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~ 181 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAED-----------------------FLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWAN 181 (686)
T ss_pred EEEeEEEECCCCCEEEEEec-----------------------CCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEee
Confidence 35777899999998887741 1112445799999998864332211222 4699999
Q ss_pred CCCEEEEEeCC------CeEEEEECCCC--eeEEEEccCCCCEE-EEEEecCCCEEEEEeC---CCeEEEEec
Q psy9327 132 EYPWILSASDD------QTIRIWYWQSR--NCICVLTGHNHYVM-CAQFHPTDDIVVSASL---DQTIRVWDI 192 (641)
Q Consensus 132 ~~~~l~sgs~D------g~I~vWd~~~~--~~i~~l~~h~~~V~-sl~fsp~g~~lvSgs~---DgtI~IWD~ 192 (641)
++..|+.+..+ ..|+.|++.++ +....+.+...... .+..+.++.+++..+. ++.+.+++.
T Consensus 182 D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~ 254 (686)
T PRK10115 182 DSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDA 254 (686)
T ss_pred CCCEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEEC
Confidence 98866554432 36888898887 33333433333333 3333437776554433 457888884
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=90.36 E-value=12 Score=42.09 Aligned_cols=95 Identities=8% Similarity=0.004 Sum_probs=45.8
Q ss_pred CeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC------CeEEEEECCCCeeEEE--EccCCCCEEEEEEe
Q psy9327 101 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD------QTIRIWYWQSRNCICV--LTGHNHYVMCAQFH 172 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D------g~I~vWd~~~~~~i~~--l~~h~~~V~sl~fs 172 (641)
..+..||..+++....-.-....-...+..-++...+.||.+ ..+..||..+.+-... +...... .+++ .
T Consensus 358 ~~v~~yd~~~~~W~~~~~lp~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~-~~~~-~ 435 (534)
T PHA03098 358 NTVESWKPGESKWREEPPLIFPRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYG-GCAI-Y 435 (534)
T ss_pred ceEEEEcCCCCceeeCCCcCcCCccceEEEECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccC-ceEE-E
Confidence 357788887765432111011111111122356677777732 4688899877643211 1100111 1222 2
Q ss_pred cCCCEEEEEeCC--------CeEEEEecCCCce
Q psy9327 173 PTDDIVVSASLD--------QTIRVWDISGLRK 197 (641)
Q Consensus 173 p~g~~lvSgs~D--------gtI~IWD~~~~~~ 197 (641)
.++...+.|+.+ ..+.+||..+.+-
T Consensus 436 ~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W 468 (534)
T PHA03098 436 HDGKIYVIGGISYIDNIKVYNIVESYNPVTNKW 468 (534)
T ss_pred ECCEEEEECCccCCCCCcccceEEEecCCCCce
Confidence 356666666643 2378888876544
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=90.27 E-value=43 Score=39.15 Aligned_cols=116 Identities=9% Similarity=0.040 Sum_probs=69.5
Q ss_pred CeEEEEEccCCCeEEEEeC-----CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 11 RVKGLSFHPKRPWILSSLH-----NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~-----dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
.+..+.+||||++|+.+.. ..+|++-|+.+|+.+... ..+.-..++|++|+..|+-+...
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~--i~~~~~~~~w~~D~~~~~y~~~~------------- 192 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPEL--LDNVEPSFVWANDSWTFYYVRKH------------- 192 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCcc--ccCcceEEEEeeCCCEEEEEEec-------------
Confidence 4777899999998886643 235888898888643221 11112569999998877666410
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCC--eeEEEEccCCCCeE-EEEEccCCCEEEEEeC---CCeEEEEEC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQR--KCIFTLLGHLDYIR-TTFFHHEYPWILSASD---DQTIRIWYW 150 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~--~~~~~~~~h~~~V~-~v~fsp~~~~l~sgs~---Dg~I~vWd~ 150 (641)
+ .......|..|++.++ +-...+....+... .+..+.++.+++..+. ++.+.+++.
T Consensus 193 --~-------~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~ 254 (686)
T PRK10115 193 --P-------VTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDA 254 (686)
T ss_pred --C-------CCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEEC
Confidence 0 0002357888898887 33344444334333 2333447776654433 457888884
|
|
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=90.24 E-value=3.2 Score=45.91 Aligned_cols=114 Identities=19% Similarity=0.294 Sum_probs=70.5
Q ss_pred CCeEEEEEccC----CCeEEEEeCCCcEEEEECc-----cCccccccc-cccc--C--eEEEEEeCCCCEEEEeceeeEE
Q psy9327 10 ARVKGLSFHPK----RPWILSSLHNGVIQLWDYR-----MNTLLEKFD-EHEG--P--VRGICFHNQQPIFVSGGKMIVM 75 (641)
Q Consensus 10 ~~V~~l~fspd----g~~Lasg~~dg~I~iWD~~-----~~~~l~~~~-~h~~--~--V~~i~fsp~~~~l~sgs~~~~~ 75 (641)
+.|.+++|.|- -+-+++-.+...|.+|-+. .++.+..-. .... | -.++.|||....|++-.
T Consensus 57 EhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT----- 131 (671)
T PF15390_consen 57 EHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLT----- 131 (671)
T ss_pred ceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEe-----
Confidence 56999999994 4466677778899999874 222222111 1111 1 24678999998877654
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECC--CCeeEEEEccCCCCeEEEEEccCCCEEEEEeC-CCeEEEEECCC
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK--QRKCIFTLLGHLDYIRTTFFHHEYPWILSASD-DQTIRIWYWQS 152 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~--t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~-Dg~I~vWd~~~ 152 (641)
..|- -.+.+.+ +.+....++ -.+-|.|.+|.+||+.++.|-. .=.-++||-..
T Consensus 132 ----------------------~~dv-SV~~sV~~d~srVkaDi~-~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 132 ----------------------ARDV-SVLPSVHCDSSRVKADIK-TSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred ----------------------cCce-eEeeeeeeCCceEEEecc-CCceEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence 1232 2233433 223333343 5678999999999998776644 34678888543
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=89.90 E-value=32 Score=37.20 Aligned_cols=175 Identities=13% Similarity=0.166 Sum_probs=83.7
Q ss_pred EEEEccCCCeEEEEeCC------CcEEEEECccCcccccccccc---cCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 14 GLSFHPKRPWILSSLHN------GVIQLWDYRMNTLLEKFDEHE---GPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 14 ~l~fspdg~~Lasg~~d------g~I~iWD~~~~~~l~~~~~h~---~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
.+..-|+|+.++|+..| |-+.+.|-++.+.....+... .--..+-|.|..+.++|+. ++...... .
T Consensus 134 T~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSe----Wg~P~~~~-~ 208 (461)
T PF05694_consen 134 TVHCLPDGRIMISALGDADGNGPGGFVLLDGETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSE----WGAPSMFE-K 208 (461)
T ss_dssp EEEE-SS--EEEEEEEETTS-S--EEEEE-TTT--EEEE--SB-TT------EEEETTTTEEEE-B-------HHHHT-T
T ss_pred eeeecCCccEEEEeccCCCCCCCCcEEEEcCccccccceeccCCCCCCCCCCeEEcCCCCEEEEec----cCChhhcc-c
Confidence 34455788888877442 557888877766666655432 2345677889999999986 11000000 0
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC--CeEEEEEccC--CCE-EEEEeCCCeEEEEEC-CCCe----
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD--YIRTTFFHHE--YPW-ILSASDDQTIRIWYW-QSRN---- 154 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~--~V~~v~fsp~--~~~-l~sgs~Dg~I~vWd~-~~~~---- 154 (641)
...+ ..+..+....++.+||+.+++.++++.--.+ .+-.+.|.++ ..+ |+.+.-..+|..|-- ..++
T Consensus 209 Gf~~---~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~ 285 (461)
T PF05694_consen 209 GFNP---EDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAE 285 (461)
T ss_dssp ---T---TTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEE
T ss_pred CCCh---hHhhcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeee
Confidence 0111 1111223567899999999999999875432 3456777553 333 444445666666643 3332
Q ss_pred eEEEEcc-----C------------CCCEEEEEEecCCCEEEEEe-CCCeEEEEecCCCc
Q psy9327 155 CICVLTG-----H------------NHYVMCAQFHPTDDIVVSAS-LDQTIRVWDISGLR 196 (641)
Q Consensus 155 ~i~~l~~-----h------------~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~~~ 196 (641)
.+-.+.. - ..-|+.+..|.|.++|..++ .+|.||.||++...
T Consensus 286 kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~ 345 (461)
T PF05694_consen 286 KVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPF 345 (461)
T ss_dssp EEEEE--EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTT
T ss_pred EEEECCCcccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCC
Confidence 1111111 0 24578999999998876554 69999999998643
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=89.64 E-value=11 Score=42.93 Aligned_cols=71 Identities=6% Similarity=0.016 Sum_probs=51.1
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc-cCCCCEEEEEEec--CCCEEEEEeCCCeEEEEec
Q psy9327 122 DYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT-GHNHYVMCAQFHP--TDDIVVSASLDQTIRVWDI 192 (641)
Q Consensus 122 ~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~-~h~~~V~sl~fsp--~g~~lvSgs~DgtI~IWD~ 192 (641)
....-+.-+.-++.-+.-++...+.|||.+.+..-..-. ...+.|..+.|.. ++..+++.+-...|.++.-
T Consensus 30 ~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q 103 (631)
T PF12234_consen 30 SNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQ 103 (631)
T ss_pred CCcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEc
Confidence 344455555556655556666789999999887443222 3578899999964 7889999999999999854
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=89.61 E-value=16 Score=39.96 Aligned_cols=38 Identities=26% Similarity=0.482 Sum_probs=29.2
Q ss_pred EEEEEEecCC---CEEEEEeCCCeEEEEecCCCceeeeccC
Q psy9327 166 VMCAQFHPTD---DIVVSASLDQTIRVWDISGLRKKNVAPG 203 (641)
Q Consensus 166 V~sl~fsp~g---~~lvSgs~DgtI~IWD~~~~~~~~~~~~ 203 (641)
+..++|||+. ..++.-+.|.+||+||.+..+.....++
T Consensus 168 l~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~telylqpg 208 (741)
T KOG4460|consen 168 LKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTELYLQPG 208 (741)
T ss_pred eeeccccCCccCCceEEEEecCcEEEEEecCCcchhhccCC
Confidence 5567899865 6777788899999999998776655443
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=89.58 E-value=15 Score=41.38 Aligned_cols=59 Identities=8% Similarity=0.029 Sum_probs=38.7
Q ss_pred CeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 143 QTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 143 g~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
+.+.-+|+.+++..-..........+. ..-.+.+++.++.||.++.+|.++++.+-...
T Consensus 441 g~l~AiD~~tGk~~W~~~~~~p~~~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~ 499 (527)
T TIGR03075 441 GSLIAWDPITGKIVWEHKEDFPLWGGV-LATAGDLVFYGTLEGYFKAFDAKTGEELWKFK 499 (527)
T ss_pred eeEEEEeCCCCceeeEecCCCCCCCcc-eEECCcEEEEECCCCeEEEEECCCCCEeEEEe
Confidence 457778888887666554221111111 12246678888889999999999998765543
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=89.46 E-value=13 Score=42.90 Aligned_cols=100 Identities=16% Similarity=0.162 Sum_probs=69.6
Q ss_pred eeEEEeeCCCeEEEEECCC-------C-------------eeEEEEccCCCCeEEEEEc--cCCCEEEEEeCCCeEEEEE
Q psy9327 92 RIKSVLGDDYKIKVWNYKQ-------R-------------KCIFTLLGHLDYIRTTFFH--HEYPWILSASDDQTIRIWY 149 (641)
Q Consensus 92 ~~~~~~s~Dg~I~vWD~~t-------~-------------~~~~~~~~h~~~V~~v~fs--p~~~~l~sgs~Dg~I~vWd 149 (641)
..+++|.+||.|.+|..++ . ++...+. -...++++++| ...++||.++....|.||-
T Consensus 115 EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFa 193 (717)
T PF08728_consen 115 EVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTVFA 193 (717)
T ss_pred eEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEEEE
Confidence 3455567999999996521 0 1222333 34578999999 7888999999999998886
Q ss_pred CCCC---eeEEEEccCCCCEEEEEEecCC---C---EEEEEeCCCeEEEEec
Q psy9327 150 WQSR---NCICVLTGHNHYVMCAQFHPTD---D---IVVSASLDQTIRVWDI 192 (641)
Q Consensus 150 ~~~~---~~i~~l~~h~~~V~sl~fsp~g---~---~lvSgs~DgtI~IWD~ 192 (641)
+... .....-..|.+.|.+++|-++. . ++++++-.|.+.+|++
T Consensus 194 f~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 194 FALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 5432 1111112367789999998743 2 7888999999999888
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=89.43 E-value=12 Score=39.97 Aligned_cols=112 Identities=12% Similarity=0.112 Sum_probs=60.2
Q ss_pred CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCC-eEEEEECCC--Ce--eEEEEccCCCCeEEE
Q psy9327 53 PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDY-KIKVWNYKQ--RK--CIFTLLGHLDYIRTT 127 (641)
Q Consensus 53 ~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg-~I~vWD~~t--~~--~~~~~~~h~~~V~~v 127 (641)
....|+|.++|+++++-... .+.. .......+ .|.+++-.+ |+ ....|.......+++
T Consensus 15 ~P~~ia~d~~G~l~V~e~~~--------------y~~~---~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi 77 (367)
T TIGR02604 15 NPIAVCFDERGRLWVAEGIT--------------YSRP---AGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGL 77 (367)
T ss_pred CCceeeECCCCCEEEEeCCc--------------CCCC---CCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccce
Confidence 44679999999987775300 0000 00000223 777776443 33 234444445567889
Q ss_pred EEccCCCEEEEEeCCCeEEEEECCC-------CeeE-EEEcc----CCCCEEEEEEecCCCEEEEEeC
Q psy9327 128 FFHHEYPWILSASDDQTIRIWYWQS-------RNCI-CVLTG----HNHYVMCAQFHPTDDIVVSASL 183 (641)
Q Consensus 128 ~fsp~~~~l~sgs~Dg~I~vWd~~~-------~~~i-~~l~~----h~~~V~sl~fsp~g~~lvSgs~ 183 (641)
++.+++ ++++ +.+...++.|... .+.+ ..+.. +.+....+.|.|||.+.++-+.
T Consensus 78 ~~~~~G-lyV~-~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~ 143 (367)
T TIGR02604 78 AVAVGG-VYVA-TPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGN 143 (367)
T ss_pred eEecCC-EEEe-CCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEeccc
Confidence 999998 5554 4443333434421 1122 22322 2355778999999987776553
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=89.38 E-value=14 Score=33.08 Aligned_cols=112 Identities=8% Similarity=0.129 Sum_probs=70.1
Q ss_pred EEEEEccCCCeEEEEeCCCcEEEEECccCcccc-------cccccccCeEEEEEeC-----CCCEEEEeceeeEEeeece
Q psy9327 13 KGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLE-------KFDEHEGPVRGICFHN-----QQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 13 ~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~-------~~~~h~~~V~~i~fsp-----~~~~l~sgs~~~~~~~~~~ 80 (641)
..-.|....+.|++++.-|.|.|++........ ++-.-...|++|+-.+ +...|+.|
T Consensus 2 aiGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliG----------- 70 (136)
T PF14781_consen 2 AIGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIG----------- 70 (136)
T ss_pred eEEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEe-----------
Confidence 344677778889999999999999875432211 1112345566665433 23455555
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc----CCCEEEEEeCCCeEEEEECCCCee
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH----EYPWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp----~~~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
....+..||+....-++.-+ -.+.|+++.+-. +.++++.| .+..|.-+|..-.+.
T Consensus 71 ------------------t~t~llaYDV~~N~d~Fyke-~~DGvn~i~~g~~~~~~~~l~ivG-Gncsi~Gfd~~G~e~ 129 (136)
T PF14781_consen 71 ------------------TQTSLLAYDVENNSDLFYKE-VPDGVNAIVIGKLGDIPSPLVIVG-GNCSIQGFDYEGNEI 129 (136)
T ss_pred ------------------ccceEEEEEcccCchhhhhh-CccceeEEEEEecCCCCCcEEEEC-ceEEEEEeCCCCcEE
Confidence 46789999998876555333 447788877643 34455554 467788777654443
|
|
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=89.13 E-value=54 Score=38.70 Aligned_cols=102 Identities=14% Similarity=0.039 Sum_probs=67.1
Q ss_pred eCCCeEEEEECCCCeeEEEEccCCC--------CeEEEEEcc----------------CCCEEEEEeCCCeEEEEECCCC
Q psy9327 98 GDDYKIKVWNYKQRKCIFTLLGHLD--------YIRTTFFHH----------------EYPWILSASDDQTIRIWYWQSR 153 (641)
Q Consensus 98 s~Dg~I~vWD~~t~~~~~~~~~h~~--------~V~~v~fsp----------------~~~~l~sgs~Dg~I~vWd~~~~ 153 (641)
+.++.|.-.|..+|+.+.++..... ..+.+++.. .+..++.++.|+.+.-.|.+++
T Consensus 201 t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~LiALDA~TG 280 (764)
T TIGR03074 201 TPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLIALDADTG 280 (764)
T ss_pred CCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEEEEECCCC
Confidence 3788999999999999888764322 123444432 2347888889999999999999
Q ss_pred eeEEEEccCCCCEE-------------EEEEec--CCCEEEEEeC----------CCeEEEEecCCCceeee
Q psy9327 154 NCICVLTGHNHYVM-------------CAQFHP--TDDIVVSASL----------DQTIRVWDISGLRKKNV 200 (641)
Q Consensus 154 ~~i~~l~~h~~~V~-------------sl~fsp--~g~~lvSgs~----------DgtI~IWD~~~~~~~~~ 200 (641)
+.+..+. ..+.|. ...-.| .+..++.|+. +|.|+-+|.++++..=.
T Consensus 281 k~~W~fg-~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~ 351 (764)
T TIGR03074 281 KLCEDFG-NNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWA 351 (764)
T ss_pred CEEEEec-CCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeE
Confidence 9887663 222221 111122 2445666643 68899999999887543
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=89.11 E-value=8.1 Score=43.87 Aligned_cols=90 Identities=9% Similarity=-0.020 Sum_probs=45.2
Q ss_pred CeEEEEECCCCeeEE--EEccCCCCeEEEEEccCCCEEEEEeCCC-----------------------eEEEEECCCCee
Q psy9327 101 YKIKVWNYKQRKCIF--TLLGHLDYIRTTFFHHEYPWILSASDDQ-----------------------TIRIWYWQSRNC 155 (641)
Q Consensus 101 g~I~vWD~~t~~~~~--~~~~h~~~V~~v~fsp~~~~l~sgs~Dg-----------------------~I~vWd~~~~~~ 155 (641)
.++..||..+.+... .+.........+. -++...+.||.++ ++..||..+.+-
T Consensus 367 ~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~--~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W 444 (557)
T PHA02713 367 RTIECYTMGDDKWKMLPDMPIALSSYGMCV--LDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIW 444 (557)
T ss_pred ceEEEEECCCCeEEECCCCCcccccccEEE--ECCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeE
Confidence 358889988765432 1111111112222 2577777777652 477788776643
Q ss_pred E--EEEccCCCCEEEEEEecCCCEEEEEeCC------CeEEEEecCC
Q psy9327 156 I--CVLTGHNHYVMCAQFHPTDDIVVSASLD------QTIRVWDISG 194 (641)
Q Consensus 156 i--~~l~~h~~~V~sl~fsp~g~~lvSgs~D------gtI~IWD~~~ 194 (641)
. ..+....... +++ .-++.+.+.|+.+ ..+..||..+
T Consensus 445 ~~v~~m~~~r~~~-~~~-~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~ 489 (557)
T PHA02713 445 ETLPNFWTGTIRP-GVV-SHKDDIYVVCDIKDEKNVKTCIFRYNTNT 489 (557)
T ss_pred eecCCCCcccccC-cEE-EECCEEEEEeCCCCCCccceeEEEecCCC
Confidence 2 1111111111 122 2246666777654 2466788776
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=89.08 E-value=37 Score=36.82 Aligned_cols=47 Identities=9% Similarity=0.004 Sum_probs=38.7
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC
Q psy9327 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM 204 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~ 204 (641)
.+....-.+.+++.+|++.+.++...=|.|.++|+.++..++.+.|.
T Consensus 302 ~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGY 348 (415)
T PF14655_consen 302 GLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGY 348 (415)
T ss_pred eeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccC
Confidence 34445556889999999999998877899999999999888887764
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=89.06 E-value=5 Score=45.23 Aligned_cols=94 Identities=10% Similarity=-0.004 Sum_probs=45.9
Q ss_pred CeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC--------CeEEEEECCCCeeEEE--EccCCCCEEEEE
Q psy9327 101 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD--------QTIRIWYWQSRNCICV--LTGHNHYVMCAQ 170 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D--------g~I~vWd~~~~~~i~~--l~~h~~~V~sl~ 170 (641)
..+..||..+++....-......-...+...++..++.||.+ ..+.+||..+.+-... +.........+.
T Consensus 406 ~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 485 (534)
T PHA03098 406 KTVECFSLNTNKWSKGSPLPISHYGGCAIYHDGKIYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCI 485 (534)
T ss_pred ceEEEEeCCCCeeeecCCCCccccCceEEEECCEEEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEE
Confidence 468888988765432111000100111222356666777643 2388889877653221 111111111222
Q ss_pred EecCCCEEEEEeCC-----CeEEEEecCCCc
Q psy9327 171 FHPTDDIVVSASLD-----QTIRVWDISGLR 196 (641)
Q Consensus 171 fsp~g~~lvSgs~D-----gtI~IWD~~~~~ 196 (641)
+ ++.+++.|+.+ ..+.+||..+.+
T Consensus 486 ~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 514 (534)
T PHA03098 486 F--NNKIYVVGGDKYEYYINEIEVYDDKTNT 514 (534)
T ss_pred E--CCEEEEEcCCcCCcccceeEEEeCCCCE
Confidence 2 56677777654 467777776543
|
|
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=88.99 E-value=0.05 Score=57.98 Aligned_cols=143 Identities=12% Similarity=0.180 Sum_probs=101.2
Q ss_pred EEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceee
Q psy9327 14 GLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRI 93 (641)
Q Consensus 14 ~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~ 93 (641)
...|-|.+.-++.++.+..+..|| +.++..... ...+....++|..+++.++....
T Consensus 39 ~~~w~~e~~nlavaca~tiv~~YD-~agq~~le~-n~tg~aldm~wDkegdvlavlAe---------------------- 94 (615)
T KOG2247|consen 39 IHRWRPEGHNLAVACANTIVIYYD-KAGQVILEL-NPTGKALDMAWDKEGDVLAVLAE---------------------- 94 (615)
T ss_pred eeeEecCCCceehhhhhhHHHhhh-hhcceeccc-CCchhHhhhhhccccchhhhhhh----------------------
Confidence 445777766688888888899998 445544444 24455567888888887666552
Q ss_pred EEEeeCCCeEEEEECCCCeeEE-EEcc-CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEE
Q psy9327 94 KSVLGDDYKIKVWNYKQRKCIF-TLLG-HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQF 171 (641)
Q Consensus 94 ~~~~s~Dg~I~vWD~~t~~~~~-~~~~-h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~f 171 (641)
..+.+.+||+.+..... .+.+ |.... +.|++..+.++.+-..+.+.|++.++.+.+-..-.|..+++++++
T Consensus 95 -----k~~piylwd~n~eytqqLE~gg~~s~sl--l~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av 167 (615)
T KOG2247|consen 95 -----KTGPIYLWDVNSEYTQQLESGGTSSKSL--LAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAV 167 (615)
T ss_pred -----cCCCeeechhhhhhHHHHhccCcchHHH--HhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEe
Confidence 78899999997643211 1111 32332 789999999999999999999999887766666559999999999
Q ss_pred ecCCCEEEEEeCCCeEE
Q psy9327 172 HPTDDIVVSASLDQTIR 188 (641)
Q Consensus 172 sp~g~~lvSgs~DgtI~ 188 (641)
.+++. .+.++.|.++.
T Consensus 168 ~lEd~-vil~dcd~~L~ 183 (615)
T KOG2247|consen 168 TLEDY-VILCDCDNTLS 183 (615)
T ss_pred cccce-eeecCcHHHHH
Confidence 98764 45555555543
|
|
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=88.93 E-value=1.5 Score=30.92 Aligned_cols=31 Identities=23% Similarity=0.433 Sum_probs=26.3
Q ss_pred CCEEEEEEecCC---CEEEEEeCCCeEEEEecCC
Q psy9327 164 HYVMCAQFHPTD---DIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 164 ~~V~sl~fsp~g---~~lvSgs~DgtI~IWD~~~ 194 (641)
+.|+++.|+|++ ++|+-+-.-|.|.|+|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 468999999854 5888888889999999994
|
It contains a characteristic DLL sequence motif. |
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=88.89 E-value=21 Score=40.75 Aligned_cols=51 Identities=10% Similarity=0.134 Sum_probs=38.9
Q ss_pred CCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC
Q psy9327 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151 (641)
Q Consensus 99 ~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~ 151 (641)
....|+|+++. |+++.++.-..+.+-++.|+.+.. |++-..||++.+|++-
T Consensus 62 a~~~I~If~~s-G~lL~~~~w~~~~lI~mgWs~~ee-LI~v~k~g~v~Vy~~~ 112 (829)
T KOG2280|consen 62 ARPYIRIFNIS-GQLLGRILWKHGELIGMGWSDDEE-LICVQKDGTVHVYGLL 112 (829)
T ss_pred cceeEEEEecc-ccchHHHHhcCCCeeeecccCCce-EEEEeccceEEEeecc
Confidence 34568899865 777766655555788999998876 6666789999999975
|
|
| >PLN00033 photosystem II stability/assembly factor; Provisional | Back alignment and domain information |
|---|
Probab=88.88 E-value=34 Score=36.98 Aligned_cols=144 Identities=6% Similarity=-0.051 Sum_probs=82.0
Q ss_pred eEEEEEccCCCeEEEEeCCCcEEEEECccCccc-cc-ccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLL-EK-FDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 12 V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l-~~-~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
...+..+++|.+++.|..-..++-|| .|... .. -......+.++.|.+++.+++++.
T Consensus 241 f~~v~~~~dG~~~~vg~~G~~~~s~d--~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g~------------------- 299 (398)
T PLN00033 241 FSTVNRSPDGDYVAVSSRGNFYLTWE--PGQPYWQPHNRASARRIQNMGWRADGGLWLLTR------------------- 299 (398)
T ss_pred eeeEEEcCCCCEEEEECCccEEEecC--CCCcceEEecCCCccceeeeeEcCCCCEEEEeC-------------------
Confidence 44556778887777765433333444 23221 11 123356789999999999988874
Q ss_pred ceeeEEEeeCCCeEEEEECCCCe-----eEEEEccC--CCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc--
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRK-----CIFTLLGH--LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT-- 160 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~-----~~~~~~~h--~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~-- 160 (641)
+|.+ +|....++ ........ ...+.++.|.+++..+ .++.+|.+.... ..++......
T Consensus 300 ----------~G~l-~~S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~-a~G~~G~v~~s~-D~G~tW~~~~~~ 366 (398)
T PLN00033 300 ----------GGGL-YVSKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKEAW-AAGGSGILLRST-DGGKSWKRDKGA 366 (398)
T ss_pred ----------CceE-EEecCCCCcccccceeecccCCCCcceEEEEEcCCCcEE-EEECCCcEEEeC-CCCcceeEcccc
Confidence 5553 33334443 12222211 1248889999887755 455567766654 3444333322
Q ss_pred -cCCCCEEEEEEecCCCEEEEEeCCCeEEEE
Q psy9327 161 -GHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190 (641)
Q Consensus 161 -~h~~~V~sl~fsp~g~~lvSgs~DgtI~IW 190 (641)
+-......+.|.++++.+++ +.+|.|.-|
T Consensus 367 ~~~~~~ly~v~f~~~~~g~~~-G~~G~il~~ 396 (398)
T PLN00033 367 DNIAANLYSVKFFDDKKGFVL-GNDGVLLRY 396 (398)
T ss_pred CCCCcceeEEEEcCCCceEEE-eCCcEEEEe
Confidence 22456778998877766665 456776554
|
|
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=88.84 E-value=33 Score=39.35 Aligned_cols=73 Identities=15% Similarity=0.236 Sum_probs=48.5
Q ss_pred CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC
Q psy9327 31 GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ 110 (641)
Q Consensus 31 g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t 110 (641)
-.|+|+++ +|.++.+..-..+++-++.|+.+..+++.. .||++.||++..
T Consensus 64 ~~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~eeLI~v~-----------------------------k~g~v~Vy~~~g 113 (829)
T KOG2280|consen 64 PYIRIFNI-SGQLLGRILWKHGELIGMGWSDDEELICVQ-----------------------------KDGTVHVYGLLG 113 (829)
T ss_pred eeEEEEec-cccchHHHHhcCCCeeeecccCCceEEEEe-----------------------------ccceEEEeecch
Confidence 45888885 577777766556688899999988887776 899999999753
Q ss_pred CeeEEE----EccCCCCeEEEEEccCCC
Q psy9327 111 RKCIFT----LLGHLDYIRTTFFHHEYP 134 (641)
Q Consensus 111 ~~~~~~----~~~h~~~V~~v~fsp~~~ 134 (641)
.. +.. +......|..+.|..+|-
T Consensus 114 e~-ie~~svg~e~~~~~I~ec~~f~~GV 140 (829)
T KOG2280|consen 114 EF-IESNSVGFESQMSDIVECRFFHNGV 140 (829)
T ss_pred hh-hcccccccccccCceeEEEEecCce
Confidence 22 222 122333455555555553
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=88.76 E-value=39 Score=36.60 Aligned_cols=149 Identities=10% Similarity=0.125 Sum_probs=72.5
Q ss_pred CCCeEEEEe-CCCcEEEEECcc----Ccccccccc---cc----cCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 20 KRPWILSSL-HNGVIQLWDYRM----NTLLEKFDE---HE----GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 20 dg~~Lasg~-~dg~I~iWD~~~----~~~l~~~~~---h~----~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
++++|+..+ .++.|.|.|+.+ .++.+.++. +. ..-..+..-|+|..++|+--.
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd--------------- 150 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGD--------------- 150 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEE---------------
T ss_pred cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccC---------------
Confidence 556676665 789999999863 333344432 11 111223334788888886300
Q ss_pred CcceeeEEEeeCCCeEEEEECCCCeeEEEEccCC---CCeEEEEEccCCCEEEEEeC--------------------CCe
Q psy9327 88 PCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL---DYIRTTFFHHEYPWILSASD--------------------DQT 144 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~---~~V~~v~fsp~~~~l~sgs~--------------------Dg~ 144 (641)
.-+..-|-+.+.|-++.......+... ..-....++|..+.++|+.. ..+
T Consensus 151 -------~~G~g~Ggf~llD~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~ 223 (461)
T PF05694_consen 151 -------ADGNGPGGFVLLDGETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHS 223 (461)
T ss_dssp -------TTS-S--EEEEE-TTT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--E
T ss_pred -------CCCCCCCcEEEEcCccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCe
Confidence 000123468888888887777766432 34567888999998888754 357
Q ss_pred EEEEECCCCeeEEEEccCCC--CEEEEEEecCC--CE-EEEEeCCCeEEEE
Q psy9327 145 IRIWYWQSRNCICVLTGHNH--YVMCAQFHPTD--DI-VVSASLDQTIRVW 190 (641)
Q Consensus 145 I~vWd~~~~~~i~~l~~h~~--~V~sl~fsp~g--~~-lvSgs~DgtI~IW 190 (641)
+.+||+.+++.++++.--.. -+..+.|.++. .+ ++.+-...+|..|
T Consensus 224 l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~ 274 (461)
T PF05694_consen 224 LHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRF 274 (461)
T ss_dssp EEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEE
T ss_pred EEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEE
Confidence 99999999999999863322 35567776653 33 4444444455444
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=88.51 E-value=30 Score=34.95 Aligned_cols=116 Identities=13% Similarity=0.067 Sum_probs=70.4
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccc--------------cccccCeEEEE---EeCCCCEEEEecee
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF--------------DEHEGPVRGIC---FHNQQPIFVSGGKM 72 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~--------------~~h~~~V~~i~---fsp~~~~l~sgs~~ 72 (641)
.+|..+...|+-+.+++=+ ||.+.++++..-...... -.....+...+ -...+..++++
T Consensus 36 ~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va--- 111 (275)
T PF00780_consen 36 SSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVA--- 111 (275)
T ss_pred ceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccccccccccccccCCeeEEeeccccccceEEEEE---
Confidence 3499999999877665554 599999998754433311 01122333333 11233344444
Q ss_pred eEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC-----eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEE
Q psy9327 73 IVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR-----KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 147 (641)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~-----~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~v 147 (641)
...+|.+|.+... +....+. -.+.+.+++|. ++.++.|..+ ...+
T Consensus 112 --------------------------~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~--~~~i~v~~~~-~f~~ 161 (275)
T PF00780_consen 112 --------------------------VKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFL--GNKICVGTSK-GFYL 161 (275)
T ss_pred --------------------------ECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEe--CCEEEEEeCC-ceEE
Confidence 4558998888653 3445554 34778899998 5557777644 4778
Q ss_pred EECCCCeeEEEE
Q psy9327 148 WYWQSRNCICVL 159 (641)
Q Consensus 148 Wd~~~~~~i~~l 159 (641)
.|+.++.....+
T Consensus 162 idl~~~~~~~l~ 173 (275)
T PF00780_consen 162 IDLNTGSPSELL 173 (275)
T ss_pred EecCCCCceEEe
Confidence 898876654433
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=87.83 E-value=1.5 Score=30.88 Aligned_cols=31 Identities=23% Similarity=0.370 Sum_probs=26.6
Q ss_pred CCeEEEEEccC-C--CeEEEEeCCCcEEEEECcc
Q psy9327 10 ARVKGLSFHPK-R--PWILSSLHNGVIQLWDYRM 40 (641)
Q Consensus 10 ~~V~~l~fspd-g--~~Lasg~~dg~I~iWD~~~ 40 (641)
+.|.++.|||+ + .+|+.+-+.|.|.|+|.++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 46899999984 4 5899998999999999985
|
It contains a characteristic DLL sequence motif. |
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=87.65 E-value=5.1 Score=39.28 Aligned_cols=92 Identities=13% Similarity=0.171 Sum_probs=62.3
Q ss_pred EEEEEccCCCeE-EEEeCCCcEEEEEC--ccCccc-----cccc---cccc-CeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 13 KGLSFHPKRPWI-LSSLHNGVIQLWDY--RMNTLL-----EKFD---EHEG-PVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 13 ~~l~fspdg~~L-asg~~dg~I~iWD~--~~~~~l-----~~~~---~h~~-~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
++++|+.+.+.+ ..-+.+-+|.-||+ .+|... ..++ .... .--+++..-+|.+.++.-
T Consensus 161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~---------- 230 (310)
T KOG4499|consen 161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATF---------- 230 (310)
T ss_pred ccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEe----------
Confidence 567888776644 45566888988985 455321 1111 1111 112344455666666664
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccC
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE 132 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~ 132 (641)
..++|+-.|..+|+.+.++.-....|++++|--.
T Consensus 231 ------------------ng~~V~~~dp~tGK~L~eiklPt~qitsccFgGk 264 (310)
T KOG4499|consen 231 ------------------NGGTVQKVDPTTGKILLEIKLPTPQITSCCFGGK 264 (310)
T ss_pred ------------------cCcEEEEECCCCCcEEEEEEcCCCceEEEEecCC
Confidence 7899999999999999999988999999999753
|
|
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=87.40 E-value=12 Score=39.30 Aligned_cols=103 Identities=16% Similarity=0.170 Sum_probs=60.1
Q ss_pred eEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee---EEEE----ccCCCCeEE
Q psy9327 54 VRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC---IFTL----LGHLDYIRT 126 (641)
Q Consensus 54 V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~---~~~~----~~h~~~V~~ 126 (641)
-.+|+|.|++..+++- ..|.|++++ ..+.. +..+ .........
T Consensus 4 P~~~a~~pdG~l~v~e-----------------------------~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllg 53 (331)
T PF07995_consen 4 PRSMAFLPDGRLLVAE-----------------------------RSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLG 53 (331)
T ss_dssp EEEEEEETTSCEEEEE-----------------------------TTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEE
T ss_pred ceEEEEeCCCcEEEEe-----------------------------CCceEEEEe-CCCcCcceecccccccccccCCccc
Confidence 4789999999887765 799999999 55543 3333 224567899
Q ss_pred EEEccC---CCEE-EEEeCC--------CeEEEEECCCC-------eeE-EEEc---cCCCCEEEEEEecCCCEEEEEeC
Q psy9327 127 TFFHHE---YPWI-LSASDD--------QTIRIWYWQSR-------NCI-CVLT---GHNHYVMCAQFHPTDDIVVSASL 183 (641)
Q Consensus 127 v~fsp~---~~~l-~sgs~D--------g~I~vWd~~~~-------~~i-~~l~---~h~~~V~sl~fsp~g~~lvSgs~ 183 (641)
++|||+ ..+| ++.+.. ..|.-|.+..+ +.+ ..+. ...+.-..+.|.|+|.+.++.+.
T Consensus 54 ia~~p~f~~n~~lYv~~t~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~ 133 (331)
T PF07995_consen 54 IAFHPDFASNGYLYVYYTNADEDGGDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGD 133 (331)
T ss_dssp EEE-TTCCCC-EEEEEEEEE-TSSSSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-
T ss_pred ceeccccCCCCEEEEEEEcccCCCCCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCC
Confidence 999994 3333 333321 23444444333 112 1222 23556778999999987777766
Q ss_pred CCe
Q psy9327 184 DQT 186 (641)
Q Consensus 184 Dgt 186 (641)
.+.
T Consensus 134 ~~~ 136 (331)
T PF07995_consen 134 GGN 136 (331)
T ss_dssp TTT
T ss_pred CCC
Confidence 544
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=87.38 E-value=8.6 Score=44.79 Aligned_cols=31 Identities=16% Similarity=0.196 Sum_probs=21.5
Q ss_pred CCCeEEEEEccC---CCEEEEEeCCCeEEEEECC
Q psy9327 121 LDYIRTTFFHHE---YPWILSASDDQTIRIWYWQ 151 (641)
Q Consensus 121 ~~~V~~v~fsp~---~~~l~sgs~Dg~I~vWd~~ 151 (641)
...|..+.|||. +++|+.-..|+++++||+.
T Consensus 146 ~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~ 179 (717)
T PF10168_consen 146 SLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDIS 179 (717)
T ss_pred CceEEEEEEcCCCCCCCeEEEEecCCEEEEEecC
Confidence 446777777774 4677777777777777763
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=87.32 E-value=2.8 Score=49.46 Aligned_cols=142 Identities=8% Similarity=-0.001 Sum_probs=86.7
Q ss_pred CCeEEEEEccCCCeEEEE--eCCCcEEEEECccCcccc-----ccc------ccccCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 10 ARVKGLSFHPKRPWILSS--LHNGVIQLWDYRMNTLLE-----KFD------EHEGPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg--~~dg~I~iWD~~~~~~l~-----~~~------~h~~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
-+|..+...+|+...++. +.+-.|..+|+++-..-. -+. ....-+.++.|.|.-+.-...+
T Consensus 101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~------ 174 (1405)
T KOG3630|consen 101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVD------ 174 (1405)
T ss_pred ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhh------
Confidence 456666667776644433 333367888886432111 011 1223445667777654433332
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee-EEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC-IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~-~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
+.|+.|.|..+..-.. ..++ .-...+++++|+|.|..++.|-..|++.-|-.. .+.
T Consensus 175 ---------------------l~dlsl~V~~~~~~~~~v~s~-p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~-lei 231 (1405)
T KOG3630|consen 175 ---------------------LSDLSLRVKSTKQLAQNVTSF-PVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS-LEI 231 (1405)
T ss_pred ---------------------ccccchhhhhhhhhhhhhccc-CcccceeeEEeccccceeeEecCCCeEEEeecc-cce
Confidence 4899999887754322 2222 245678999999999999999999999888643 222
Q ss_pred EEEEcc----CCCCEEEEEEecCCCEEEE
Q psy9327 156 ICVLTG----HNHYVMCAQFHPTDDIVVS 180 (641)
Q Consensus 156 i~~l~~----h~~~V~sl~fsp~g~~lvS 180 (641)
...+.+ ....|.+++|-....++++
T Consensus 232 k~~ip~Pp~~e~yrvl~v~Wl~t~eflvv 260 (1405)
T KOG3630|consen 232 KSEIPEPPVEENYRVLSVTWLSTQEFLVV 260 (1405)
T ss_pred eecccCCCcCCCcceeEEEEecceeEEEE
Confidence 222221 1467999999877766665
|
|
| >KOG1900|consensus | Back alignment and domain information |
|---|
Probab=87.32 E-value=14 Score=44.69 Aligned_cols=135 Identities=12% Similarity=0.218 Sum_probs=83.4
Q ss_pred CCCcEEEEECccCcccccccccccCeEEEEEe--------CCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCC
Q psy9327 29 HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH--------NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDD 100 (641)
Q Consensus 29 ~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fs--------p~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~D 100 (641)
.|..+.+|++.++.....+++-+..|..+..- |.=.+++.-+ .-
T Consensus 97 iDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvva----------------------------T~ 148 (1311)
T KOG1900|consen 97 IDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVA----------------------------TP 148 (1311)
T ss_pred eCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEec----------------------------cc
Confidence 47789999999988888888877777777643 2222222222 11
Q ss_pred CeEEEEECC----CCee-----EEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEEC--CC------Cee--------
Q psy9327 101 YKIKVWNYK----QRKC-----IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYW--QS------RNC-------- 155 (641)
Q Consensus 101 g~I~vWD~~----t~~~-----~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~--~~------~~~-------- 155 (641)
-.|.++-+. ++.. ..++....-.|+++....+|+.|++|-+| .+|.+ +. ++|
T Consensus 149 ~ei~ilgV~~~~~~~~~~~f~~~~~i~~dg~~V~~I~~t~nGRIF~~G~dg---~lyEl~Yq~~~gWf~~rc~Kiclt~s 225 (1311)
T KOG1900|consen 149 VEIVILGVSFDEFTGELSIFNTSFKISVDGVSVNCITYTENGRIFFAGRDG---NLYELVYQAEDGWFGSRCRKICLTKS 225 (1311)
T ss_pred ceEEEEEEEeccccCcccccccceeeecCCceEEEEEeccCCcEEEeecCC---CEEEEEEeccCchhhcccccccCchh
Confidence 223333211 1100 02233334568888877788866666555 34432 11 111
Q ss_pred --------EEEEc-cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 156 --------ICVLT-GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 156 --------i~~l~-~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
+..+. .+.++|..+........+.+-+..|+|++||+..
T Consensus 226 ~ls~lvPs~~~~~~~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 226 VLSSLVPSLLSVPGSSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred HHHHhhhhhhcCCCCCCCcceeeEeccccceeeeeccCceEEEEEccC
Confidence 11223 5678999999988888999999999999999975
|
|
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=87.24 E-value=6.8 Score=42.57 Aligned_cols=142 Identities=14% Similarity=0.187 Sum_probs=92.1
Q ss_pred CCCeEE-EEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCE-------EEEeceeeEEeeeceeeecccCCcce
Q psy9327 20 KRPWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI-------FVSGGKMIVMAYQGCILESRNEPCLF 91 (641)
Q Consensus 20 dg~~La-sg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~-------l~sgs~~~~~~~~~~~~~~~~~~~~~ 91 (641)
+.+++. .|+....+.-.|++-|+.+..+..|... -+.|.|.... -++|
T Consensus 478 dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvG---------------------- 533 (776)
T COG5167 478 DSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVG---------------------- 533 (776)
T ss_pred CcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEe----------------------
Confidence 444443 4555566777788889888888777666 4677765331 1222
Q ss_pred eeEEEeeCCCeEEEEECCC-CeeEEEEccCCCCeEEEEEcc----CCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCE
Q psy9327 92 RIKSVLGDDYKIKVWNYKQ-RKCIFTLLGHLDYIRTTFFHH----EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYV 166 (641)
Q Consensus 92 ~~~~~~s~Dg~I~vWD~~t-~~~~~~~~~h~~~V~~v~fsp----~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V 166 (641)
..+..|.--|.+- |..+.. ....++++--.|+. ...+++.||..|.|++||--..+....+.+....|
T Consensus 534 ------lS~~svFrIDPR~~gNKi~v-~esKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aI 606 (776)
T COG5167 534 ------LSDYSVFRIDPRARGNKIKV-VESKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAI 606 (776)
T ss_pred ------ecccceEEecccccCCceee-eeehhccccccccccccccCceEEEecCCCceeeehhhcchhhhcCcccccce
Confidence 2556665556543 222221 12333444334443 45689999999999999965555555677778889
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEecC
Q psy9327 167 MCAQFHPTDDIVVSASLDQTIRVWDIS 193 (641)
Q Consensus 167 ~sl~fsp~g~~lvSgs~DgtI~IWD~~ 193 (641)
..+..+.+|.+++..+.. .+.+-|+.
T Consensus 607 k~idvta~Gk~ilaTCk~-yllL~d~~ 632 (776)
T COG5167 607 KHIDVTANGKHILATCKN-YLLLTDVP 632 (776)
T ss_pred eeeEeecCCcEEEEeecc-eEEEEecc
Confidence 999999999998877754 67777765
|
|
| >TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118 | Back alignment and domain information |
|---|
Probab=87.18 E-value=39 Score=34.79 Aligned_cols=58 Identities=26% Similarity=0.456 Sum_probs=40.7
Q ss_pred eEEEEEccCCCeEEEEeCCCcEEEEECc------cC-cccccccc-----cccCeEEEEEeCCCCEEEEe
Q psy9327 12 VKGLSFHPKRPWILSSLHNGVIQLWDYR------MN-TLLEKFDE-----HEGPVRGICFHNQQPIFVSG 69 (641)
Q Consensus 12 V~~l~fspdg~~Lasg~~dg~I~iWD~~------~~-~~l~~~~~-----h~~~V~~i~fsp~~~~l~sg 69 (641)
-..|+|+|.+.+-++....+...+||.. .. .++-.+.. ..+..+++.|+....+.+++
T Consensus 25 ~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~ 94 (336)
T TIGR03118 25 AWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSG 94 (336)
T ss_pred cceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcC
Confidence 3679999999988888888999999985 12 12222221 23467899998776665665
|
This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus. |
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=86.77 E-value=4.9 Score=39.60 Aligned_cols=53 Identities=8% Similarity=0.213 Sum_probs=38.8
Q ss_pred EccCCCeEEEEeCCCcEEEEECccCcccccc-------c-------ccccCeEEEEEeCCCCEEEEe
Q psy9327 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-------D-------EHEGPVRGICFHNQQPIFVSG 69 (641)
Q Consensus 17 fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~-------~-------~h~~~V~~i~fsp~~~~l~sg 69 (641)
+..++++|++-..+|.+++||+.+++.+..- . .....|..+.++.+|.-+++-
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~l 84 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTL 84 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEE
Confidence 5567889999999999999999987654332 1 244567777777777666665
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=86.51 E-value=13 Score=40.39 Aligned_cols=104 Identities=17% Similarity=0.183 Sum_probs=68.3
Q ss_pred CCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-------EEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEE
Q psy9327 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-------WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQF 171 (641)
Q Consensus 99 ~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-------~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~f 171 (641)
....+.-.|++.|+.+..+.-|.+. -+.|.|+.. .-+.|-.|..|.-.|.+-+...-......++++.-.|
T Consensus 488 ~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~esKdY~tKn~F 565 (776)
T COG5167 488 ERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVESKDYKTKNKF 565 (776)
T ss_pred CcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeeeehhccccccc
Confidence 6678888999999999999988776 478887532 2344555666666676543311122224455555555
Q ss_pred ec----CCCEEEEEeCCCeEEEEecCCCceeeeccCC
Q psy9327 172 HP----TDDIVVSASLDQTIRVWDISGLRKKNVAPGM 204 (641)
Q Consensus 172 sp----~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~ 204 (641)
+. ...+++.||..|-||+||--.-+....+|+.
T Consensus 566 ss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~l 602 (776)
T COG5167 566 SSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGL 602 (776)
T ss_pred cccccccCceEEEecCCCceeeehhhcchhhhcCccc
Confidence 54 3457888888889999987665555555544
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=86.24 E-value=8.9 Score=41.53 Aligned_cols=104 Identities=7% Similarity=0.028 Sum_probs=67.3
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEe---CCCCEEEEeceeeEEeeece
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH---NQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fs---p~~~~l~sgs~~~~~~~~~~ 80 (641)
.|......+.+++.+|++.+.|+...=|.|.++|+.++..++.+++....- +.|. ..+.. .... .
T Consensus 302 ~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAq--c~wi~~~~~~~~-~~~~---------~ 369 (415)
T PF14655_consen 302 GLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQ--CGWIEVPEEGDR-DRSN---------S 369 (415)
T ss_pred eeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccce--EEEEEeeccccc-cccc---------c
Confidence 345555679999999999988888778999999999999988887754432 2232 11110 0000 0
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG 119 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~ 119 (641)
-...........++..+..-|.|-||++++|..+..+..
T Consensus 370 ~~~~~~~~~~l~LvIyaprRg~lEvW~~~~g~Rv~a~~v 408 (415)
T PF14655_consen 370 NSPKSSSRFALFLVIYAPRRGILEVWSMRQGPRVAAFNV 408 (415)
T ss_pred cccCCCCcceEEEEEEeccCCeEEEEecCCCCEEEEEEe
Confidence 000111122344455667899999999999988777653
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=85.05 E-value=45 Score=33.55 Aligned_cols=112 Identities=7% Similarity=-0.084 Sum_probs=66.0
Q ss_pred CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccC
Q psy9327 53 PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE 132 (641)
Q Consensus 53 ~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~ 132 (641)
.+...++++++..++.... ......+.++.. +....... -...+..-.|+++
T Consensus 25 ~~~s~AvS~dg~~~A~v~~-------------------------~~~~~~L~~~~~--~~~~~~~~-~g~~l~~PS~d~~ 76 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSE-------------------------GDGGRSLYVGPA--GGPVRPVL-TGGSLTRPSWDPD 76 (253)
T ss_pred cccceEECCCCCeEEEEEE-------------------------cCCCCEEEEEcC--CCcceeec-cCCccccccccCC
Confidence 7888999999987766430 003344555543 33223221 2236677789999
Q ss_pred CCEEEEEeCCCeEEEEE-CCCCeeE-EEEcc--CCCCEEEEEEecCCCEEEEEe---CCCeEEEEec
Q psy9327 133 YPWILSASDDQTIRIWY-WQSRNCI-CVLTG--HNHYVMCAQFHPTDDIVVSAS---LDQTIRVWDI 192 (641)
Q Consensus 133 ~~~l~sgs~Dg~I~vWd-~~~~~~i-~~l~~--h~~~V~sl~fsp~g~~lvSgs---~DgtI~IWD~ 192 (641)
+...+....+...+++. ..+++.. ..... -.+.|+.+.++|||..++... .++.|.+=-+
T Consensus 77 g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V 143 (253)
T PF10647_consen 77 GWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGV 143 (253)
T ss_pred CCEEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEE
Confidence 87666666667767774 2333221 11211 112899999999998776655 3455555444
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=84.97 E-value=8.8 Score=45.64 Aligned_cols=94 Identities=7% Similarity=0.035 Sum_probs=62.7
Q ss_pred CCCeEEEEECCCCee--------EE---EEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCe-eEEEEccCCCC
Q psy9327 99 DDYKIKVWNYKQRKC--------IF---TLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRN-CICVLTGHNHY 165 (641)
Q Consensus 99 ~Dg~I~vWD~~t~~~--------~~---~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~-~i~~l~~h~~~ 165 (641)
.+-.|..+|+++-.. +. +.......+.++.|.|.=+ ..+....|+.|++..+.... ....+ .-...
T Consensus 122 ng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~-p~t~~ 200 (1405)
T KOG3630|consen 122 NGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSF-PVTNS 200 (1405)
T ss_pred CCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhhhhhhccc-Ccccc
Confidence 556799999865321 11 1111233456788888644 45677789999888765322 12222 24566
Q ss_pred EEEEEEecCCCEEEEEeCCCeEEEEecC
Q psy9327 166 VMCAQFHPTDDIVVSASLDQTIRVWDIS 193 (641)
Q Consensus 166 V~sl~fsp~g~~lvSgs~DgtI~IWD~~ 193 (641)
.++++|+|.|..++.|-..|++.-|-..
T Consensus 201 ~Tav~WSprGKQl~iG~nnGt~vQy~P~ 228 (1405)
T KOG3630|consen 201 QTAVLWSPRGKQLFIGRNNGTEVQYEPS 228 (1405)
T ss_pred eeeEEeccccceeeEecCCCeEEEeecc
Confidence 8999999999999999999999877654
|
|
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=84.96 E-value=12 Score=39.34 Aligned_cols=50 Identities=24% Similarity=0.474 Sum_probs=34.3
Q ss_pred CeEEEEEccCCCeEEEEeCCCcEEEEECccCcc---ccc----ccccccCeEEEEEeCC
Q psy9327 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL---LEK----FDEHEGPVRGICFHNQ 62 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~---l~~----~~~h~~~V~~i~fsp~ 62 (641)
.-++|+|.|||.++++ ...|.|++++ ..+.. +.. .........+++|+|+
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~ 59 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPD 59 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TT
T ss_pred CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccc
Confidence 4578999999976554 5699999999 33432 222 2234567899999994
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=84.96 E-value=19 Score=35.12 Aligned_cols=93 Identities=11% Similarity=0.348 Sum_probs=59.8
Q ss_pred CCCeEEEEECC--CCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC------CeEEEE-ECCCC----eeEE-EEcc---
Q psy9327 99 DDYKIKVWNYK--QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD------QTIRIW-YWQSR----NCIC-VLTG--- 161 (641)
Q Consensus 99 ~Dg~I~vWD~~--t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D------g~I~vW-d~~~~----~~i~-~l~~--- 161 (641)
..+.|.+|++. ..+++.+|.. -+.|..+.++..|+++++-=.+ ..+|+| ||+.. .++. .+-|
T Consensus 36 ~g~~Vev~~l~~~~~~~~~~F~T-v~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~vRiaG~~v 114 (215)
T PF14761_consen 36 SGCKVEVYDLEQEECPLLCTFST-VGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRVRIAGHRV 114 (215)
T ss_pred CCCEEEEEEcccCCCceeEEEcc-hhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEEEEccccc
Confidence 57789999988 3466777764 4889999999999999985332 256665 44432 1111 1112
Q ss_pred ------------------CCCCEEEEEEecC-CCEEEEEeCCCeEEEEecCC
Q psy9327 162 ------------------HNHYVMCAQFHPT-DDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 162 ------------------h~~~V~sl~fsp~-g~~lvSgs~DgtI~IWD~~~ 194 (641)
-...+.+++-.|- |++++ |+ ++++.+|.+..
T Consensus 115 ~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlV-g~-~~~l~lf~l~~ 164 (215)
T PF14761_consen 115 TPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLV-GC-GNKLVLFTLKY 164 (215)
T ss_pred ccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEE-Ec-CCEEEEEEEEE
Confidence 2335667777774 55544 44 45888998764
|
|
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=84.64 E-value=6.2 Score=38.91 Aligned_cols=67 Identities=7% Similarity=0.158 Sum_probs=51.0
Q ss_pred EEccCCCEEEEEeCCCeEEEEECCCCeeEEEE-------c-------cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecC
Q psy9327 128 FFHHEYPWILSASDDQTIRIWYWQSRNCICVL-------T-------GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193 (641)
Q Consensus 128 ~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l-------~-------~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~ 193 (641)
.+..++.++++-+.+|.+++||+.+++++..- . .....|..+.++.+|.-+++-+ +|..+.||..
T Consensus 17 ~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~ 95 (219)
T PF07569_consen 17 FLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPD 95 (219)
T ss_pred EEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEeccc
Confidence 35567889999999999999999998765432 1 3556788888888887777665 4678888876
Q ss_pred CC
Q psy9327 194 GL 195 (641)
Q Consensus 194 ~~ 195 (641)
-+
T Consensus 96 L~ 97 (219)
T PF07569_consen 96 LG 97 (219)
T ss_pred cc
Confidence 53
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=84.02 E-value=39 Score=39.93 Aligned_cols=150 Identities=11% Similarity=0.122 Sum_probs=95.7
Q ss_pred CeEEEEEccC-CCeEEEEeC----------CCcEEEEECccCccccccccc--ccCeEEEEEeCCCCEEEEeceeeEEee
Q psy9327 11 RVKGLSFHPK-RPWILSSLH----------NGVIQLWDYRMNTLLEKFDEH--EGPVRGICFHNQQPIFVSGGKMIVMAY 77 (641)
Q Consensus 11 ~V~~l~fspd-g~~Lasg~~----------dg~I~iWD~~~~~~l~~~~~h--~~~V~~i~fsp~~~~l~sgs~~~~~~~ 77 (641)
.|.++.|+.| +.++++|.. .|.|.++.+..++.+.....+ .+.|.++.- =+|+++|+
T Consensus 776 Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~-fngkllA~--------- 845 (1096)
T KOG1897|consen 776 SIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVE-FNGKLLAG--------- 845 (1096)
T ss_pred eeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhh-hCCeEEEe---------
Confidence 4556668887 667887743 477888877764444443222 233333321 14544444
Q ss_pred eceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCC--Cee
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS--RNC 155 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~--~~~ 155 (641)
-+.+|++|++.+++.++.-..|..++..+...-.+..++.|.-=+.+.+-.++. +..
T Consensus 846 ---------------------In~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f 904 (1096)
T KOG1897|consen 846 ---------------------INQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNF 904 (1096)
T ss_pred ---------------------cCcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCce
Confidence 467899999999988888788999999999999999999998777766655443 323
Q ss_pred EEEE-ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEec
Q psy9327 156 ICVL-TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192 (641)
Q Consensus 156 i~~l-~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~ 192 (641)
...- .-|....+++.+- +++..+.+..+|.+.+-..
T Consensus 905 ~evArD~~p~Wmtaveil-~~d~ylgae~~gNlf~v~~ 941 (1096)
T KOG1897|consen 905 EEVARDYNPNWMTAVEIL-DDDTYLGAENSGNLFTVRK 941 (1096)
T ss_pred EEeehhhCccceeeEEEe-cCceEEeecccccEEEEEe
Confidence 2222 2345556666654 4455555666666665543
|
|
| >PF13449 Phytase-like: Esterase-like activity of phytase | Back alignment and domain information |
|---|
Probab=83.76 E-value=61 Score=33.99 Aligned_cols=142 Identities=12% Similarity=0.167 Sum_probs=84.8
Q ss_pred CCeEEEEEccCCCeEEEEeCCCc------EEEEECcc--C--ccc-----cccccccc--------CeEEEEEeCCCCEE
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGV------IQLWDYRM--N--TLL-----EKFDEHEG--------PVRGICFHNQQPIF 66 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~------I~iWD~~~--~--~~l-----~~~~~h~~--------~V~~i~fsp~~~~l 66 (641)
+.+++|.+.|++..+++-+.+|. +...++.. + ..+ ..+....+ -.-+|++.+++.++
T Consensus 20 GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~~ 99 (326)
T PF13449_consen 20 GGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSFW 99 (326)
T ss_pred CcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCEE
Confidence 67889999976666777777777 55555443 1 000 01111111 33478887788777
Q ss_pred EEeceeeEEeeeceeeecccCCcceeeEEEeeCC------CeEEEEECCCCeeEEEEc---------------cCCCCeE
Q psy9327 67 VSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDD------YKIKVWNYKQRKCIFTLL---------------GHLDYIR 125 (641)
Q Consensus 67 ~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~D------g~I~vWD~~t~~~~~~~~---------------~h~~~V~ 125 (641)
++.- .+ ..|..+|.. |+.+..+. ..+...-
T Consensus 100 is~E----------------------------~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E 150 (326)
T PF13449_consen 100 ISSE----------------------------GGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFE 150 (326)
T ss_pred EEeC----------------------------CccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeE
Confidence 7764 45 778888866 65544431 1345688
Q ss_pred EEEEccCCCEEEEEeC-----CC--e-------EEEE--ECCC-CeeE----EEEcc-----CCCCEEEEEEecCCCEEE
Q psy9327 126 TTFFHHEYPWILSASD-----DQ--T-------IRIW--YWQS-RNCI----CVLTG-----HNHYVMCAQFHPTDDIVV 179 (641)
Q Consensus 126 ~v~fsp~~~~l~sgs~-----Dg--~-------I~vW--d~~~-~~~i----~~l~~-----h~~~V~sl~fsp~g~~lv 179 (641)
+++++|++..|+++.. |+ . ++++ |..+ +... ..+.. ....|..+.+.+++++++
T Consensus 151 ~la~~~dG~~l~~~~E~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLv 230 (326)
T PF13449_consen 151 GLAVSPDGRTLFAAMESPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLV 230 (326)
T ss_pred EEEECCCCCEEEEEECccccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEE
Confidence 9999999996655432 22 1 4554 4443 2222 22222 356788899999988766
Q ss_pred E
Q psy9327 180 S 180 (641)
Q Consensus 180 S 180 (641)
-
T Consensus 231 L 231 (326)
T PF13449_consen 231 L 231 (326)
T ss_pred E
Confidence 4
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=82.47 E-value=77 Score=34.22 Aligned_cols=155 Identities=12% Similarity=0.091 Sum_probs=85.6
Q ss_pred EEEEccCCCeEEEEeCCC-----------cEEEEECccCccc--ccccccccC--eEEEEEeCCCCEEEEeceeeEEeee
Q psy9327 14 GLSFHPKRPWILSSLHNG-----------VIQLWDYRMNTLL--EKFDEHEGP--VRGICFHNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 14 ~l~fspdg~~Lasg~~dg-----------~I~iWD~~~~~~l--~~~~~h~~~--V~~i~fsp~~~~l~sgs~~~~~~~~ 78 (641)
++.|.+++..|+....+. .|..|.+.++..- ..|+....+ ...+..++++++++....
T Consensus 174 ~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~------- 246 (414)
T PF02897_consen 174 SVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSS------- 246 (414)
T ss_dssp EEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEE-------
T ss_pred eEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEE-------
Confidence 389999988766554332 3777777665432 345544443 567889999998776541
Q ss_pred ceeeecccCCcceeeEEEeeCC-CeEEEEECCCC----eeEEEEccCCCCeEEEEEccCCCEEEEEeC---CCeEEEEEC
Q psy9327 79 GCILESRNEPCLFRIKSVLGDD-YKIKVWNYKQR----KCIFTLLGHLDYIRTTFFHHEYPWILSASD---DQTIRIWYW 150 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~D-g~I~vWD~~t~----~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~---Dg~I~vWd~ 150 (641)
.+.+ ..+.+.|...+ .....+..+...+....-+..+.+++.... ++.|.-.++
T Consensus 247 ------------------~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l 308 (414)
T PF02897_consen 247 ------------------SGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVDHHGDRLYILTNDDAPNGRLVAVDL 308 (414)
T ss_dssp ------------------SSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEEEETTEEEEEE-TT-TT-EEEEEET
T ss_pred ------------------ccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEEccCCEEEEeeCCCCCCcEEEEecc
Confidence 0133 56888888874 223333334444444333334545544433 467777788
Q ss_pred CCCee---EEEEccCCCCEEEEEEecCCC-EEEEEeCCC--eEEEEecC
Q psy9327 151 QSRNC---ICVLTGHNHYVMCAQFHPTDD-IVVSASLDQ--TIRVWDIS 193 (641)
Q Consensus 151 ~~~~~---i~~l~~h~~~V~sl~fsp~g~-~lvSgs~Dg--tI~IWD~~ 193 (641)
.+... ...+-.|...+.-..+...++ ++++-..++ .|+++|+.
T Consensus 309 ~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~ 357 (414)
T PF02897_consen 309 ADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLD 357 (414)
T ss_dssp TSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT
T ss_pred cccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECC
Confidence 76652 335556666544344444444 455555554 68889998
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=82.11 E-value=14 Score=43.15 Aligned_cols=70 Identities=13% Similarity=0.228 Sum_probs=48.1
Q ss_pred CeEEEEEccCCCeEEEEeCCCcEEEEECcc----------Ccc---cccc--------cccccCeEEEEEeCC---CCEE
Q psy9327 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRM----------NTL---LEKF--------DEHEGPVRGICFHNQ---QPIF 66 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~dg~I~iWD~~~----------~~~---l~~~--------~~h~~~V~~i~fsp~---~~~l 66 (641)
.|..+.++|+|.+++..|..|.+.+ .+.. |+. .+++ ..+...|..+.|||. ++.|
T Consensus 86 ~v~~i~~n~~g~~lal~G~~~v~V~-~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l 164 (717)
T PF10168_consen 86 EVHQISLNPTGSLLALVGPRGVVVL-ELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHL 164 (717)
T ss_pred eEEEEEECCCCCEEEEEcCCcEEEE-EeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeE
Confidence 5889999999999999988775433 3321 111 1111 134567889999986 4666
Q ss_pred EEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC
Q psy9327 67 VSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK 109 (641)
Q Consensus 67 ~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~ 109 (641)
++-. .|+++++||+.
T Consensus 165 ~vLt----------------------------sdn~lR~y~~~ 179 (717)
T PF10168_consen 165 VVLT----------------------------SDNTLRLYDIS 179 (717)
T ss_pred EEEe----------------------------cCCEEEEEecC
Confidence 6665 89999999985
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=81.23 E-value=76 Score=35.30 Aligned_cols=92 Identities=5% Similarity=-0.121 Sum_probs=43.7
Q ss_pred CeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCC---eEEEEECCCCeeEEE--EccCCCCEEEEEEecCC
Q psy9327 101 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ---TIRIWYWQSRNCICV--LTGHNHYVMCAQFHPTD 175 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg---~I~vWd~~~~~~i~~--l~~h~~~V~sl~fsp~g 175 (641)
..+..||..+++....-.-...........-++...+.||.++ ++..||.++.+-... +....... +++ .-++
T Consensus 331 ~sve~ydp~~n~W~~~~~l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~-~~~-~~~~ 408 (480)
T PHA02790 331 TSVERWFHGDAAWVNMPSLLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKS-CAL-VFGR 408 (480)
T ss_pred CceEEEECCCCeEEECCCCCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccc-eEE-EECC
Confidence 4577888766543321111111111112223577778877653 477888876543221 11011111 121 2245
Q ss_pred CEEEEEeCCCeEEEEecCCCce
Q psy9327 176 DIVVSASLDQTIRVWDISGLRK 197 (641)
Q Consensus 176 ~~lvSgs~DgtI~IWD~~~~~~ 197 (641)
.+.+.|+ .+.+||..+.+-
T Consensus 409 ~IYv~GG---~~e~ydp~~~~W 427 (480)
T PHA02790 409 RLFLVGR---NAEFYCESSNTW 427 (480)
T ss_pred EEEEECC---ceEEecCCCCcE
Confidence 5556553 567788765443
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=80.93 E-value=29 Score=38.56 Aligned_cols=89 Identities=7% Similarity=-0.046 Sum_probs=42.3
Q ss_pred CeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE--EEccCCCCEEEEEEecCCCEE
Q psy9327 101 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC--VLTGHNHYVMCAQFHPTDDIV 178 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~--~l~~h~~~V~sl~fsp~g~~l 178 (641)
..+..||.++.+....-.-....-...+..-++...+.|+ .+.+||.++.+-.. .+.........+. -++...
T Consensus 376 ~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~~~~IYv~GG---~~e~ydp~~~~W~~~~~m~~~r~~~~~~v--~~~~IY 450 (480)
T PHA02790 376 TTTEYLLPNHDQWQFGPSTYYPHYKSCALVFGRRLFLVGR---NAEFYCESSNTWTLIDDPIYPRDNPELII--VDNKLL 450 (480)
T ss_pred ccEEEEeCCCCEEEeCCCCCCccccceEEEECCEEEEECC---ceEEecCCCCcEeEcCCCCCCccccEEEE--ECCEEE
Confidence 4577888877654332111111001112223566666664 46788887654321 1211111222222 257777
Q ss_pred EEEeCC-----CeEEEEecCC
Q psy9327 179 VSASLD-----QTIRVWDISG 194 (641)
Q Consensus 179 vSgs~D-----gtI~IWD~~~ 194 (641)
+.|+.+ .++..||..+
T Consensus 451 viGG~~~~~~~~~ve~Yd~~~ 471 (480)
T PHA02790 451 LIGGFYRGSYIDTIEVYNNRT 471 (480)
T ss_pred EECCcCCCcccceEEEEECCC
Confidence 777754 2455666554
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=80.76 E-value=78 Score=33.87 Aligned_cols=181 Identities=10% Similarity=0.063 Sum_probs=81.5
Q ss_pred EECCCCeeEEEEccCCCCeE-----EEEEccCCCEEEEEeC-CC--eEEEEECCCCeeEEEEccCCCCEEEEEEecCCCE
Q psy9327 106 WNYKQRKCIFTLLGHLDYIR-----TTFFHHEYPWILSASD-DQ--TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177 (641)
Q Consensus 106 WD~~t~~~~~~~~~h~~~V~-----~v~fsp~~~~l~sgs~-Dg--~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~ 177 (641)
-|-.||..+..+..+.+... .=+|.++|+.|+-+|+ |+ .+.+.|+.+++..+--.+-.........+|+++.
T Consensus 15 ~D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~ 94 (386)
T PF14583_consen 15 IDPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRA 94 (386)
T ss_dssp E-TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSE
T ss_pred eCCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCe
Confidence 36678877777765443322 2356778876655554 44 5777788888755433322222335667888888
Q ss_pred EEEEeCCCeEEEEecCCCceeeeccCCCceeee--c--ccCCC-ceeeeee---------------eeeeCCCeeEEEec
Q psy9327 178 VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLS--M--KSKHP-IWKYCKP---------------VKYCNPKHTLHICN 237 (641)
Q Consensus 178 lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s--~--~~~~~-v~~~~~~---------------l~s~~~d~~I~i~d 237 (641)
++-...+..++--|+++++......-...++-. . ..... +..+... +........|...|
T Consensus 95 ~~Yv~~~~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~id 174 (386)
T PF14583_consen 95 LYYVKNGRSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTID 174 (386)
T ss_dssp EEEEETTTEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEE
T ss_pred EEEEECCCeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEE
Confidence 766666678999999998765444322222211 0 10000 0000000 11111233333344
Q ss_pred -CCCcceeeecCCcceEEEEEcCCccEEEEecC-------CeEEEEEcCCCCeEecc
Q psy9327 238 -RKMEPLCNIHENTRVKSGAWDESGVFIYTTSN-------HIKYAIVNGDHGIIRTL 286 (641)
Q Consensus 238 -~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~-------~~k~~l~~~~~g~I~~~ 286 (641)
..++.-..+.....+..+.|+|...-+++-+. +.++++.+.+.+..+.+
T Consensus 175 l~tG~~~~v~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v 231 (386)
T PF14583_consen 175 LKTGERKVVFEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKV 231 (386)
T ss_dssp TTT--EEEEEEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EES
T ss_pred CCCCceeEEEecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceee
Confidence 44444444455777888899988655555441 45777777666555544
|
|
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=80.69 E-value=10 Score=40.65 Aligned_cols=102 Identities=11% Similarity=0.218 Sum_probs=70.8
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc----ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT----LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~----~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
..++|.++.||+|.+.+|+--.|.+|.+.+....+ ...+.+..+..|.+..|+.+...-+..
T Consensus 65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s~e~A~i~-------------- 130 (657)
T KOG2377|consen 65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTEIAFIT-------------- 130 (657)
T ss_pred CCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecCeeEEEEe--------------
Confidence 45799999999999999999999999999984322 223344566779999998775443332
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCC-CeeEEEEccCCCCeEEEEEccCCCEEEEE
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQ-RKCIFTLLGHLDYIRTTFFHHEYPWILSA 139 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t-~~~~~~~~~h~~~V~~v~fsp~~~~l~sg 139 (641)
+.-+-+|-... .+.++..+.|.-.|.--.|.++-..++-+
T Consensus 131 ----------------~~G~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~ 171 (657)
T KOG2377|consen 131 ----------------DQGIEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLS 171 (657)
T ss_pred ----------------cCCeEEEEEchhhhhhhhhhhcccCccEEEEccccceEeee
Confidence 33355555432 33455566788888888888877754433
|
|
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=80.65 E-value=17 Score=41.95 Aligned_cols=113 Identities=8% Similarity=0.090 Sum_probs=74.4
Q ss_pred CeEEEEEcc--CCCeEEEEeCCCcEEEEECcc-------C----cc---c----ccc-cccccCeEEEEEe--CCCCEEE
Q psy9327 11 RVKGLSFHP--KRPWILSSLHNGVIQLWDYRM-------N----TL---L----EKF-DEHEGPVRGICFH--NQQPIFV 67 (641)
Q Consensus 11 ~V~~l~fsp--dg~~Lasg~~dg~I~iWD~~~-------~----~~---l----~~~-~~h~~~V~~i~fs--p~~~~l~ 67 (641)
.|+-|.... ....|+.|..||.|.+|..++ . +. . -.| ..-...+.++++| ...+++|
T Consensus 102 tIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIA 181 (717)
T PF08728_consen 102 TINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIA 181 (717)
T ss_pred eeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEE
Confidence 355555544 456899999999999997631 0 00 0 001 1134578899999 7888888
Q ss_pred EeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC--ee-EEEEccCCCCeEEEEEccCC---C---EEEE
Q psy9327 68 SGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR--KC-IFTLLGHLDYIRTTFFHHEY---P---WILS 138 (641)
Q Consensus 68 sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~--~~-~~~~~~h~~~V~~v~fsp~~---~---~l~s 138 (641)
+++ ....|.||-+... +. ...-..|...|-+|+|-++. . ++++
T Consensus 182 VSs----------------------------Ns~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a 233 (717)
T PF08728_consen 182 VSS----------------------------NSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVA 233 (717)
T ss_pred Eec----------------------------CCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEE
Confidence 887 7788888765442 11 11111256678889998754 2 7888
Q ss_pred EeCCCeEEEEECC
Q psy9327 139 ASDDQTIRIWYWQ 151 (641)
Q Consensus 139 gs~Dg~I~vWd~~ 151 (641)
++-.|.+.+|++.
T Consensus 234 ~dI~G~v~~~~I~ 246 (717)
T PF08728_consen 234 TDISGEVWTFKIK 246 (717)
T ss_pred EeccCcEEEEEEE
Confidence 9999999998873
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 641 | ||||
| 3mkr_B | 320 | Crystal Structure Of Yeast AlphaEPSILON-Cop Subcomp | 1e-36 | ||
| 2ynp_A | 604 | Yeast Betaprime Cop 1-604 With Ktktn Motif Length = | 8e-27 | ||
| 3mkq_A | 814 | Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco | 9e-27 | ||
| 2yno_A | 310 | Yeast Betaprime Cop 1-304h6 Length = 310 | 1e-26 | ||
| 2ynn_A | 304 | Yeast Betaprime Cop 1-304 With Ktktn Motif Length = | 1e-26 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 2e-18 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 4e-14 | ||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 6e-16 | ||
| 2xl2_A | 334 | Wdr5 In Complex With An Rbbp5 Peptide Recruited To | 7e-16 | ||
| 2xl2_A | 334 | Wdr5 In Complex With An Rbbp5 Peptide Recruited To | 5e-14 | ||
| 2gnq_A | 336 | Structure Of Wdr5 Length = 336 | 7e-16 | ||
| 2gnq_A | 336 | Structure Of Wdr5 Length = 336 | 4e-14 | ||
| 2co0_A | 315 | Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs | 1e-15 | ||
| 2co0_A | 315 | Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs | 8e-14 | ||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 1e-15 | ||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 6e-14 | ||
| 2cnx_A | 315 | Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2. | 1e-15 | ||
| 2cnx_A | 315 | Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2. | 8e-14 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 1e-15 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 6e-14 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 1e-15 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 7e-14 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 2e-15 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 7e-14 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 2e-15 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 7e-14 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 2e-15 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 8e-14 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 2e-15 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 7e-14 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 2e-15 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 7e-14 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 2e-15 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 8e-14 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 2e-15 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 8e-14 | ||
| 3mxx_A | 315 | Crystal Structure Of Wdr5 Mutant (S62a) Length = 31 | 2e-15 | ||
| 3mxx_A | 315 | Crystal Structure Of Wdr5 Mutant (S62a) Length = 31 | 7e-14 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 2e-14 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 5e-14 | ||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 3e-14 | ||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 5e-14 | ||
| 3mks_B | 464 | Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH | 9e-12 | ||
| 3mks_B | 464 | Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH | 2e-05 | ||
| 2ovp_B | 445 | Structure Of The Skp1-Fbw7 Complex Length = 445 | 9e-12 | ||
| 2ovp_B | 445 | Structure Of The Skp1-Fbw7 Complex Length = 445 | 4e-11 | ||
| 1nex_B | 464 | Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp | 1e-11 | ||
| 1erj_A | 393 | Crystal Structure Of The C-Terminal Wd40 Domain Of | 2e-09 | ||
| 1p22_A | 435 | Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex | 2e-09 | ||
| 3zey_7 | 318 | High-resolution Cryo-electron Microscopy Structure | 1e-08 | ||
| 3shf_A | 1256 | Crystal Structure Of The R265s Mutant Of Full-Lengt | 3e-07 | ||
| 3sfz_A | 1249 | Crystal Structure Of Full-Length Murine Apaf-1 Leng | 3e-07 | ||
| 1r5m_A | 425 | Crystal Structure Of The C-Terminal Wd40 Domain Of | 8e-07 | ||
| 3dm0_A | 694 | Maltose Binding Protein Fusion With Rack1 From A. T | 8e-07 | ||
| 2hes_X | 330 | Cytosolic Iron-sulphur Assembly Protein- 1 Length = | 2e-06 | ||
| 3izb_a | 319 | Localization Of The Small Subunit Ribosomal Protein | 4e-06 | ||
| 3izb_a | 319 | Localization Of The Small Subunit Ribosomal Protein | 1e-04 | ||
| 3rfg_A | 319 | Crystal Structure Of The Yeast Rack1 Dimer In Space | 4e-06 | ||
| 3rfg_A | 319 | Crystal Structure Of The Yeast Rack1 Dimer In Space | 1e-04 | ||
| 3rfh_A | 319 | Crystal Structure Of The Yeast Rack1 Dimer In Space | 4e-06 | ||
| 3rfh_A | 319 | Crystal Structure Of The Yeast Rack1 Dimer In Space | 1e-04 | ||
| 3jyv_R | 313 | Structure Of The 40s Rrna And Proteins And PE TRNA | 5e-06 | ||
| 3jyv_R | 313 | Structure Of The 40s Rrna And Proteins And PE TRNA | 1e-04 | ||
| 1trj_A | 314 | Homology Model Of Yeast Rack1 Protein Fitted Into 1 | 5e-06 | ||
| 1trj_A | 314 | Homology Model Of Yeast Rack1 Protein Fitted Into 1 | 1e-04 | ||
| 3iza_B | 1263 | Structure Of An Apoptosome-Procaspase-9 Card Comple | 6e-06 | ||
| 3frx_A | 319 | Crystal Structure Of The Yeast Orthologue Of Rack1, | 8e-06 | ||
| 3mv2_A | 325 | Crystal Structure Of A-Cop In Complex With E-Cop Le | 3e-05 | ||
| 3sn6_B | 351 | Crystal Structure Of The Beta2 Adrenergic Receptor- | 3e-05 | ||
| 1gg2_B | 340 | G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet | 4e-05 | ||
| 1got_B | 340 | Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer | 4e-05 | ||
| 2bcj_B | 340 | Crystal Structure Of G Protein-coupled Receptor Kin | 4e-05 | ||
| 1a0r_B | 340 | Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA- | 4e-05 | ||
| 2xzm_R | 343 | Crystal Structure Of The Eukaryotic 40s Ribosomal S | 5e-05 | ||
| 3mv3_A | 325 | Crystal Structure Of A-Cop In Complex With E-Cop Le | 8e-05 | ||
| 4aow_A | 340 | Crystal Structure Of The Human Rack1 Protein At A R | 9e-05 | ||
| 2zkq_a | 317 | Structure Of A Mammalian Ribosomal 40s Subunit With | 9e-05 | ||
| 3jpx_A | 402 | Eed: A Novel Histone Trimethyllysine Binder Within | 2e-04 | ||
| 3fm0_A | 345 | Crystal Structure Of Wd40 Protein Ciao1 Length = 34 | 2e-04 | ||
| 2qxv_A | 361 | Structural Basis Of Ezh2 Recognition By Eed Length | 3e-04 | ||
| 3iiw_A | 365 | Crystal Structure Of Eed In Complex With A Trimethy | 3e-04 | ||
| 3jzn_A | 366 | Structure Of Eed In Apo Form Length = 366 | 3e-04 | ||
| 3iiy_A | 365 | Crystal Structure Of Eed In Complex With A Trimethy | 3e-04 | ||
| 3ow8_A | 321 | Crystal Structure Of The Wd Repeat-Containing Prote | 6e-04 | ||
| 2pbi_B | 354 | The Multifunctional Nature Of Gbeta5RGS9 REVEALED F | 9e-04 |
| >pdb|3MKR|B Chain B, Crystal Structure Of Yeast AlphaEPSILON-Cop Subcomplex Of The Copi Vesicular Coat Length = 320 | Back alignment and structure |
|
| >pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604 | Back alignment and structure |
|
| >pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814 | Back alignment and structure |
|
| >pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310 | Back alignment and structure |
|
| >pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334 | Back alignment and structure |
|
| >pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334 | Back alignment and structure |
|
| >pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336 | Back alignment and structure |
|
| >pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336 | Back alignment and structure |
|
| >pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315 | Back alignment and structure |
|
| >pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464 | Back alignment and structure |
|
| >pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464 | Back alignment and structure |
|
| >pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445 | Back alignment and structure |
|
| >pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445 | Back alignment and structure |
|
| >pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464 | Back alignment and structure |
|
| >pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393 | Back alignment and structure |
|
| >pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435 | Back alignment and structure |
|
| >pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318 | Back alignment and structure |
|
| >pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256 | Back alignment and structure |
|
| >pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 | Back alignment and structure |
|
| >pdb|1R5M|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Sif2 Length = 425 | Back alignment and structure |
|
| >pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694 | Back alignment and structure |
|
| >pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1 Length = 330 | Back alignment and structure |
|
| >pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319 | Back alignment and structure |
|
| >pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319 | Back alignment and structure |
|
| >pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319 | Back alignment and structure |
|
| >pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319 | Back alignment and structure |
|
| >pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319 | Back alignment and structure |
|
| >pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319 | Back alignment and structure |
|
| >pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313 | Back alignment and structure |
|
| >pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313 | Back alignment and structure |
|
| >pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314 | Back alignment and structure |
|
| >pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314 | Back alignment and structure |
|
| >pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319 | Back alignment and structure |
|
| >pdb|3MV2|A Chain A, Crystal Structure Of A-Cop In Complex With E-Cop Length = 325 | Back alignment and structure |
|
| >pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351 | Back alignment and structure |
|
| >pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340 | Back alignment and structure |
|
| >pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340 | Back alignment and structure |
|
| >pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343 | Back alignment and structure |
|
| >pdb|3MV3|A Chain A, Crystal Structure Of A-Cop In Complex With E-Cop Length = 325 | Back alignment and structure |
|
| >pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340 | Back alignment and structure |
|
| >pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317 | Back alignment and structure |
|
| >pdb|3JPX|A Chain A, Eed: A Novel Histone Trimethyllysine Binder Within The Eed-Ezh2 Polycomb Complex Length = 402 | Back alignment and structure |
|
| >pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345 | Back alignment and structure |
|
| >pdb|2QXV|A Chain A, Structural Basis Of Ezh2 Recognition By Eed Length = 361 | Back alignment and structure |
|
| >pdb|3IIW|A Chain A, Crystal Structure Of Eed In Complex With A Trimethylated Histone H3k27 Peptide Length = 365 | Back alignment and structure |
|
| >pdb|3JZN|A Chain A, Structure Of Eed In Apo Form Length = 366 | Back alignment and structure |
|
| >pdb|3IIY|A Chain A, Crystal Structure Of Eed In Complex With A Trimethylated Histone H1k26 Peptide Length = 365 | Back alignment and structure |
|
| >pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321 | Back alignment and structure |
|
| >pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354 | Back alignment and structure |
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 641 | |||
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 3mkr_B | 320 | Coatomer subunit alpha; tetratricopeptide repeats | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 3mv2_A | 325 | Coatomer subunit alpha; vesicular membrane coat CO | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.98 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.98 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.98 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.98 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.98 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.98 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.98 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.97 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.97 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.97 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.97 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.97 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.97 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.97 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.97 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.97 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.97 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.97 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.97 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.97 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.97 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.97 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.97 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.97 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 99.97 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.97 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.97 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.97 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.97 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.96 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.96 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.96 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.96 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.96 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.96 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.96 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.96 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.96 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.96 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.96 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.96 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.96 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.96 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.96 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.96 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.96 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.96 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.96 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.96 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.96 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.96 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.96 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.95 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.95 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 99.95 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.95 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.95 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.95 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.95 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.95 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.95 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.95 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.95 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.95 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.94 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.94 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.94 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.94 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.94 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.94 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.94 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.94 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.94 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.93 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.93 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.93 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.93 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.93 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.92 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.92 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.92 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.92 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.91 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.91 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.91 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.91 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.89 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.85 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.84 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.83 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.83 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.82 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.82 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.81 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.8 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.8 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.79 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.79 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.79 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.79 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.78 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.76 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.76 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.76 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.75 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.74 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.74 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.74 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.73 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.73 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.73 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.72 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.7 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.69 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.68 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.68 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.67 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.65 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.64 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.64 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.62 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.62 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.6 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.57 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.55 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.52 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.51 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.5 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.5 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.5 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.5 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.49 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.48 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.47 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.47 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.46 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.44 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.44 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.43 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.42 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.42 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.41 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.4 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.4 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.38 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.37 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.36 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.35 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.33 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.3 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.27 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.26 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.25 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.24 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.24 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.22 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.22 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.2 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.17 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.16 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.16 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.14 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.14 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.14 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.12 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.1 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.09 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.07 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.07 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.04 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.03 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 98.98 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 98.96 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 98.94 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.92 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 98.91 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 98.91 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 98.84 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 98.78 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 98.77 | |
| 3mkq_B | 177 | Coatomer subunit alpha; beta-propeller, alpha-sole | 98.7 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.69 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 98.68 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 98.68 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 98.66 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 98.62 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 98.62 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 98.61 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.6 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.58 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.57 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.56 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 98.55 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.53 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 98.51 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 98.48 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.47 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.47 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.45 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.39 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 98.38 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 98.37 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 98.35 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 98.34 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 98.21 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 98.21 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 98.16 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 98.15 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.13 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 98.12 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.12 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.08 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.06 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 98.01 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 97.99 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 97.98 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 97.97 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 97.96 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 97.91 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 97.91 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 97.9 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 97.86 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 97.85 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 97.75 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 97.73 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 97.72 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 97.71 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 97.69 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 97.66 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 97.63 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 97.55 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 97.55 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 97.52 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 97.51 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 97.5 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 97.5 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 97.48 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 97.46 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 97.45 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 97.44 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 97.43 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 97.43 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 97.41 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 97.38 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 97.27 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 97.27 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 97.14 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.11 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 97.09 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.03 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 97.0 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 96.99 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 96.75 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 96.66 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 96.64 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 96.63 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 96.62 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 96.61 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 96.51 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 96.45 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 96.33 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 96.31 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 96.18 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 96.15 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 96.08 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 96.02 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 96.02 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 95.93 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 95.86 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 95.43 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 95.36 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 95.13 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 95.07 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 95.04 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 94.52 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 93.45 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 93.3 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 93.07 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 92.92 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 92.59 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 92.07 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 91.92 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 91.67 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 90.79 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 90.34 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 90.04 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 90.01 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 90.0 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 89.43 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 89.18 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 88.61 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 88.3 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 87.9 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 87.31 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 86.98 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 86.57 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 85.21 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 84.43 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 83.14 | |
| 3qhy_B | 282 | Beta-lactamase inhibitory protein II; enyzme-inhib | 82.77 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 81.92 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 81.76 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 80.96 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 80.7 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 80.59 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 80.49 |
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-37 Score=330.60 Aligned_cols=284 Identities=20% Similarity=0.315 Sum_probs=247.6
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
..+.+|.++|++++|+|++++|++|+.||+|++||+.+++....+.+|.++|.+++|+|++.+|++|+
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs------------ 169 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS------------ 169 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEE------------
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEe------------
Confidence 46789999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h 162 (641)
.|++|++||+.+++++.++.+|.+.|.+++|+|++.++++|+.|++|++||++++.++.++.+|
T Consensus 170 ----------------~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h 233 (410)
T 1vyh_C 170 ----------------ADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 233 (410)
T ss_dssp ----------------TTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred ----------------CCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCc-e-e--------------eeeeeee
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPI-W-K--------------YCKPVKY 226 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v-~-~--------------~~~~l~s 226 (641)
...|.++.|+|++.++++|+.|++|++||+.+++....+.+|...+.++.....- + . ....+++
T Consensus 234 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~s 313 (410)
T 1vyh_C 234 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 313 (410)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEE
T ss_pred CccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEE
Confidence 9999999999999999999999999999999999998888888777765432110 0 0 0112778
Q ss_pred eCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecc---ccceEE--EEEcCc
Q psy9327 227 CNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTL---DLPIYI--TKIKGN 298 (641)
Q Consensus 227 ~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~---d~p~~~--~~~~g~ 298 (641)
++.|+.|++|| ..+..+..+. +...|.+++|+|+|.++++++.|+.+.+|+..++. +..+ ..++.. ++.++.
T Consensus 314 gs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~ 393 (410)
T 1vyh_C 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP 393 (410)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSS
T ss_pred EeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCC
Confidence 88999999999 5556665554 57789999999999999999999999999976653 3333 223333 445678
Q ss_pred EEEEEeCCCCeEEEEe
Q psy9327 299 QVYYLDRECSPHVLRI 314 (641)
Q Consensus 299 ~v~~~~~dg~i~v~~~ 314 (641)
.+++++.||.+++|+.
T Consensus 394 ~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 394 YVVTGSVDQTVKVWEC 409 (410)
T ss_dssp CEEEEETTSEEEEEC-
T ss_pred EEEEEeCCCcEEEEeC
Confidence 9999999999999975
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=313.09 Aligned_cols=285 Identities=26% Similarity=0.479 Sum_probs=231.4
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
+.++|++|.+.|++++|||++++|++|+.||+|++||+.+++.+..+..|..+|.+++|+|++++|++|+
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s---------- 74 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGS---------- 74 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEE----------
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEEC----------
Confidence 3578999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC-eeEEEE
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICVL 159 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~-~~i~~l 159 (641)
.|++|++||+.+++.+..+.+|.+.|.+++|+|+++++++|+.|++|++||++++ .+...+
T Consensus 75 ------------------~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~ 136 (304)
T 2ynn_A 75 ------------------DDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF 136 (304)
T ss_dssp ------------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEE
T ss_pred ------------------CCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhh
Confidence 9999999999999999999999999999999999999999999999999999887 566788
Q ss_pred ccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEecCCCceeeecc-CCCceeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 160 TGHNHYVMCAQFHP-TDDIVVSASLDQTIRVWDISGLRKKNVAP-GMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 160 ~~h~~~V~sl~fsp-~g~~lvSgs~DgtI~IWD~~~~~~~~~~~-~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
.+|...|.+++|+| ++..+++|+.|++|++||+++......+. ++...+..+... |... ...+++++.|+.|++||
T Consensus 137 ~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~-~~~~-~~~l~s~s~D~~i~iWd 214 (304)
T 2ynn_A 137 EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYY-PLPD-KPYMITASDDLTIKIWD 214 (304)
T ss_dssp CCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEEC-CSTT-CCEEEEEETTSEEEEEE
T ss_pred cccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEE-EcCC-CCEEEEEcCCCeEEEEe
Confidence 99999999999999 67899999999999999998776655443 232333322111 1000 01267888999999999
Q ss_pred -CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecccc---ceEE--EEEcCc--EEEEEeCCC
Q psy9327 238 -RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDL---PIYI--TKIKGN--QVYYLDREC 307 (641)
Q Consensus 238 -~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~---p~~~--~~~~g~--~v~~~~~dg 307 (641)
.....+..+. +...|.+++|+|++.+|++++.|+.+.+|+..++. ++.+.. ++.. +...+. .++++..||
T Consensus 215 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g 294 (304)
T 2ynn_A 215 YQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG 294 (304)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE
T ss_pred CCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc
Confidence 4555666555 47889999999999999999999999999987765 334432 2222 223332 355555444
Q ss_pred CeEEEEeCC
Q psy9327 308 SPHVLRIDP 316 (641)
Q Consensus 308 ~i~v~~~~~ 316 (641)
+.+|.+..
T Consensus 295 -~~~~~~~~ 302 (304)
T 2ynn_A 295 -FTVLSLGN 302 (304)
T ss_dssp -EEEEECC-
T ss_pred -eEEEEecc
Confidence 66666554
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-35 Score=309.32 Aligned_cols=278 Identities=16% Similarity=0.231 Sum_probs=240.0
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
.+|.+|.+.|.+++|+|++++|++|+.||+|++||..+++.+..+..|...|.+++|+|++.++++|+
T Consensus 49 ~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~------------ 116 (340)
T 1got_B 49 RTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGG------------ 116 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEE------------
T ss_pred eeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEe------------
Confidence 57899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCC----eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQR----KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~----~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
.|+.|++||+.++ +....+.+|.+.|.++.|++++. +++++.|++|++||+++++++..
T Consensus 117 ----------------~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~ 179 (340)
T 1got_B 117 ----------------LDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTT 179 (340)
T ss_dssp ----------------TTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEE
T ss_pred ----------------CCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEE
Confidence 9999999999875 46677889999999999998875 89999999999999999999999
Q ss_pred EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~ 238 (641)
+.+|.+.|.+++|+|++.++++|+.|++|++||+++++....+.+|...+.++... |-- ..+++++.|+.|++||.
T Consensus 180 ~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~-p~~---~~l~s~s~d~~v~iwd~ 255 (340)
T 1got_B 180 FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFF-PNG---NAFATGSDDATCRLFDL 255 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEEC-TTS---SEEEEEETTSCEEEEET
T ss_pred EcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEc-CCC---CEEEEEcCCCcEEEEEC
Confidence 99999999999999999999999999999999999999999998887777664422 211 12778889999999994
Q ss_pred -CCcceeeecC---CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecc---ccceEE--EEEcCcEEEEEeCCCC
Q psy9327 239 -KMEPLCNIHE---NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTL---DLPIYI--TKIKGNQVYYLDRECS 308 (641)
Q Consensus 239 -~~~~~~~~~~---~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~---d~p~~~--~~~~g~~v~~~~~dg~ 308 (641)
....+..+.+ ...|.+++|+|+|.++++++.++.+.+|+...+. +..+ +.++.. +..++..+++++.|+.
T Consensus 256 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 335 (340)
T 1got_B 256 RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF 335 (340)
T ss_dssp TTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSC
T ss_pred CCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCcc
Confidence 4444544443 2479999999999999999999999999976553 2222 333333 4456789999999999
Q ss_pred eEEEE
Q psy9327 309 PHVLR 313 (641)
Q Consensus 309 i~v~~ 313 (641)
+++|+
T Consensus 336 i~iWd 340 (340)
T 1got_B 336 LKIWN 340 (340)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 99994
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-38 Score=368.12 Aligned_cols=288 Identities=25% Similarity=0.469 Sum_probs=237.2
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
+.++|++|+++|++++|||+|++|++|+.||.|++||+.+++.+..+..|.++|.+++|+|++++|++|+
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---------- 74 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGS---------- 74 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEE----------
T ss_pred cceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEe----------
Confidence 3578999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC-eeEEEE
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICVL 159 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~-~~i~~l 159 (641)
.||.|++||+.+++.+.++.+|.+.|++++|+|+++++++|+.|++|++||++++ .+...+
T Consensus 75 ------------------~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 136 (814)
T 3mkq_A 75 ------------------DDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF 136 (814)
T ss_dssp ------------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEE
T ss_pred ------------------CCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEE
Confidence 8999999999999999999999999999999999999999999999999999987 778889
Q ss_pred ccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEecCCCceeeeccCCC-ceeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 160 TGHNHYVMCAQFHP-TDDIVVSASLDQTIRVWDISGLRKKNVAPGMG-KLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 160 ~~h~~~V~sl~fsp-~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~-~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
.+|...|++++|+| ++..+++++.||+|++||+.+++....+..+. ..+.++... |.- -...+++++.++.|.+||
T Consensus 137 ~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~-~~~-~~~~l~~~~~dg~i~~~d 214 (814)
T 3mkq_A 137 EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYY-PLP-DKPYMITASDDLTIKIWD 214 (814)
T ss_dssp ECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEEC-CST-TCCEEEEECTTSEEEEEE
T ss_pred cCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEE-ECC-CCCEEEEEeCCCEEEEEE
Confidence 99999999999999 88999999999999999998877766665432 333332211 100 011267788999999999
Q ss_pred -CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecccc---ceEE--EEEcCcE-EEEEeCCCC
Q psy9327 238 -RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDL---PIYI--TKIKGNQ-VYYLDRECS 308 (641)
Q Consensus 238 -~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~---p~~~--~~~~g~~-v~~~~~dg~ 308 (641)
.....+..+. +...|.+++|+|+|.++++++.++.+.+|+..++. +..+.. ++.. +..++.. ++..+.++.
T Consensus 215 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 294 (814)
T 3mkq_A 215 YQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG 294 (814)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTE
T ss_pred CCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCC
Confidence 4555555555 57789999999999999999999999999987654 333322 2222 2334432 355556777
Q ss_pred eEEEEeCCcc
Q psy9327 309 PHVLRIDPTE 318 (641)
Q Consensus 309 i~v~~~~~~~ 318 (641)
+.+|.+....
T Consensus 295 ~~~~~~~~~~ 304 (814)
T 3mkq_A 295 FTVLSLGNDE 304 (814)
T ss_dssp EEEEECSCCS
T ss_pred EEEEEcCCCC
Confidence 8888776543
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-35 Score=304.01 Aligned_cols=282 Identities=15% Similarity=0.256 Sum_probs=238.9
Q ss_pred ceeeccCCCCeEEEEEccCC-CeEEEEeCCCcEEEEECcc-----CcccccccccccCeEEEEEeCCCCEEEEeceeeEE
Q psy9327 2 LTKFETKSARVKGLSFHPKR-PWILSSLHNGVIQLWDYRM-----NTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM 75 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg-~~Lasg~~dg~I~iWD~~~-----~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~ 75 (641)
..+|++|.+.|++++|+|++ ++|++|+.||+|++||+.. +..+..+.+|...|.+++|+|++.++++|+
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s----- 84 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSAS----- 84 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE-----
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEe-----
Confidence 46899999999999999965 7999999999999999864 345677889999999999999999999998
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
.|++|++||+.+++++..+.+|.+.|.+++|+|++.++++|+.|++|++||++ +++
T Consensus 85 -----------------------~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~ 140 (319)
T 3frx_A 85 -----------------------WDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQC 140 (319)
T ss_dssp -----------------------TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCE
T ss_pred -----------------------CCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCe
Confidence 99999999999999999999999999999999999999999999999999986 567
Q ss_pred EEEEccCCCCEEEEEEecC------CCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCC
Q psy9327 156 ICVLTGHNHYVMCAQFHPT------DDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNP 229 (641)
Q Consensus 156 i~~l~~h~~~V~sl~fsp~------g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~ 229 (641)
+..+.+|...|.++.|+|. +..+++++.|++|++||+++.+....+.+|...+.++... |-- ..+++++.
T Consensus 141 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~s-p~g---~~l~s~~~ 216 (319)
T 3frx_A 141 LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTAS-PDG---TLIASAGK 216 (319)
T ss_dssp EEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEEC-TTS---SEEEEEET
T ss_pred EEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEc-CCC---CEEEEEeC
Confidence 8899999999999999995 4489999999999999999999888888888777765422 211 12778889
Q ss_pred CeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE-eccc-----------cc--eEEEE
Q psy9327 230 KHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII-RTLD-----------LP--IYITK 294 (641)
Q Consensus 230 d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I-~~~d-----------~p--~~~~~ 294 (641)
|+.|++|| .....+..+.....|.+++|+|++.++++++.++ +.+|..+.+.+ ..+. .+ ...+.
T Consensus 217 dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~-i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 295 (319)
T 3frx_A 217 DGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATG-IKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWS 295 (319)
T ss_dssp TCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTE-EEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEEC
T ss_pred CCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCC-cEEEEeCcCeeeeccCccccccccCcCcceeEEEEC
Confidence 99999999 5566677777788999999999999999988765 66666554432 2211 11 12356
Q ss_pred EcCcEEEEEeCCCCeEEEEeCCc
Q psy9327 295 IKGNQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 295 ~~g~~v~~~~~dg~i~v~~~~~~ 317 (641)
.+|..+++++.||.+++|++.+.
T Consensus 296 pdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 296 ADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp TTSSEEEEEETTSCEEEEEEEEC
T ss_pred CCCCEEEEeecCceEEEEEEeec
Confidence 78999999999999999998753
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=300.37 Aligned_cols=281 Identities=12% Similarity=0.197 Sum_probs=239.9
Q ss_pred ceeeccCCCCeEEEEEccC----CCeEEEEeCCCcEEEEECccCcc--cccccccccCeEEEEEeCCCCEEEEeceeeEE
Q psy9327 2 LTKFETKSARVKGLSFHPK----RPWILSSLHNGVIQLWDYRMNTL--LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM 75 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspd----g~~Lasg~~dg~I~iWD~~~~~~--l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~ 75 (641)
++.+++|.+.|.+++|+|+ +.+|++|+.||+|++||+..++. ...+.+|...|.+++|+|+++++++++
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s----- 99 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSS----- 99 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEE-----
T ss_pred eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEe-----
Confidence 4567899999999999985 56999999999999999987653 446789999999999999999999998
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
.|++|++||+.+++.+..+..|...+.+++|+|++++|++|+.|+.|++||+++++.
T Consensus 100 -----------------------~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~ 156 (321)
T 3ow8_A 100 -----------------------LDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK 156 (321)
T ss_dssp -----------------------TTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSE
T ss_pred -----------------------CCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCce
Confidence 999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEE
Q psy9327 156 ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHI 235 (641)
Q Consensus 156 i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i 235 (641)
...+..|...|.+++|+|++++|++|+.|++|++||+++++....+.+|...+.++... |-- ..+++++.|+.|++
T Consensus 157 ~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s-pd~---~~l~s~s~dg~i~i 232 (321)
T 3ow8_A 157 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS-PDS---QLLVTASDDGYIKI 232 (321)
T ss_dssp EEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEEC-TTS---CEEEEECTTSCEEE
T ss_pred eEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEc-CCC---CEEEEEcCCCeEEE
Confidence 99999999999999999999999999999999999999999998888877666654322 211 12778899999999
Q ss_pred ecC-CCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecc---ccceEE--EEEcCcEEEEEeCCC
Q psy9327 236 CNR-KMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTL---DLPIYI--TKIKGNQVYYLDREC 307 (641)
Q Consensus 236 ~d~-~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~---d~p~~~--~~~~g~~v~~~~~dg 307 (641)
||. .......+. +...|.+++|+|++.+|++++.|+.+.+|+..++. +..+ ..++.. +..++..+++++.|+
T Consensus 233 wd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~ 312 (321)
T 3ow8_A 233 YDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQ 312 (321)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred EECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 994 445555544 47789999999999999999999999999987765 3333 223333 445678999999999
Q ss_pred CeEEEEe
Q psy9327 308 SPHVLRI 314 (641)
Q Consensus 308 ~i~v~~~ 314 (641)
.+++|+.
T Consensus 313 ~i~vwd~ 319 (321)
T 3ow8_A 313 EIHIYDC 319 (321)
T ss_dssp CEEEEEC
T ss_pred eEEEEeC
Confidence 9999985
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-34 Score=302.49 Aligned_cols=280 Identities=17% Similarity=0.196 Sum_probs=239.1
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.++|++|.+.|++++|+|++++|++|+.||+|++||..+++....+..|...|.+++|+|++..+++|+
T Consensus 57 ~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~----------- 125 (354)
T 2pbi_B 57 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGG----------- 125 (354)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEES-----------
T ss_pred EEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEee-----------
Confidence 467899999999999999999999999999999999999988888888999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCC------eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQR------KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~------~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
.|+.+++|++... .....+.+|.+.|.+++|+|++..|++|+.|++|++||++++++
T Consensus 126 -----------------~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~ 188 (354)
T 2pbi_B 126 -----------------LDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQL 188 (354)
T ss_dssp -----------------TTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE
T ss_pred -----------------CCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeE
Confidence 9999999998653 34567778999999999999999999999999999999999999
Q ss_pred EEEEccCCCCEEEEEEec--CCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeE
Q psy9327 156 ICVLTGHNHYVMCAQFHP--TDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTL 233 (641)
Q Consensus 156 i~~l~~h~~~V~sl~fsp--~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I 233 (641)
+..+.+|...|.+++|+| ++..+++|+.||+|++||++++++...+.+|...+.++... |-- ..+++++.|+.+
T Consensus 189 ~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~-p~~---~~l~s~s~D~~v 264 (354)
T 2pbi_B 189 LQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYY-PSG---DAFASGSDDATC 264 (354)
T ss_dssp EEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC-TTS---SEEEEEETTSCE
T ss_pred EEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEe-CCC---CEEEEEeCCCeE
Confidence 999999999999999988 46899999999999999999999999998888777765432 211 127788899999
Q ss_pred EEecCC-CcceeeecC---CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecc---ccceEE--EEEcCcEEEEE
Q psy9327 234 HICNRK-MEPLCNIHE---NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTL---DLPIYI--TKIKGNQVYYL 303 (641)
Q Consensus 234 ~i~d~~-~~~~~~~~~---~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~---d~p~~~--~~~~g~~v~~~ 303 (641)
++||.+ ...+..+.. ...+.+++|+|+|.++++++.++.+.+|+..++. +..+ ..++.. +..++..++++
T Consensus 265 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sg 344 (354)
T 2pbi_B 265 RLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSG 344 (354)
T ss_dssp EEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEE
T ss_pred EEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEE
Confidence 999944 334443332 3468899999999999999999999999976654 3333 223332 45678899999
Q ss_pred eCCCCeEEEE
Q psy9327 304 DRECSPHVLR 313 (641)
Q Consensus 304 ~~dg~i~v~~ 313 (641)
+.|+.+++|+
T Consensus 345 s~D~~v~vW~ 354 (354)
T 2pbi_B 345 SWDHTLRVWA 354 (354)
T ss_dssp ETTSEEEEEC
T ss_pred cCCCCEEecC
Confidence 9999999994
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=309.60 Aligned_cols=277 Identities=16% Similarity=0.170 Sum_probs=224.1
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceee-EE-----
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMI-VM----- 75 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~-~~----- 75 (641)
.++|++|.+.|++++|+|++++|++|+.||+|++||..+++.+..+..|...|.+++|+|++.++++|+... ..
T Consensus 59 ~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~ 138 (380)
T 3iz6_a 59 CRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLS 138 (380)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECC
T ss_pred eecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECC
Confidence 367899999999999999999999999999999999999999999999999999999999999999998322 11
Q ss_pred ----------------eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE-----ccCCCCeEEEEEcc-CC
Q psy9327 76 ----------------AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL-----LGHLDYIRTTFFHH-EY 133 (641)
Q Consensus 76 ----------------~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~-----~~h~~~V~~v~fsp-~~ 133 (641)
++.+.+......|.....+++++.|++|++||+.+++.+..+ .+|...|.+++|++ ++
T Consensus 139 ~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 218 (380)
T 3iz6_a 139 SQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNA 218 (380)
T ss_dssp CCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSC
T ss_pred CCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCC
Confidence 122233344445555667899999999999999999998888 67999999999987 78
Q ss_pred CEEEEEeCCCeEEEEECC-CCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecc
Q psy9327 134 PWILSASDDQTIRIWYWQ-SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMK 212 (641)
Q Consensus 134 ~~l~sgs~Dg~I~vWd~~-~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~ 212 (641)
.+|++|+.|++|++||++ .++++..+.+|.+.|.+++|+|++..|+||+.|++|++||+++++....+..+..... .
T Consensus 219 ~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~--~ 296 (380)
T 3iz6_a 219 NMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRND--N 296 (380)
T ss_dssp CEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSC--C
T ss_pred CEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccc--c
Confidence 899999999999999998 5578889999999999999999999999999999999999999988776654321100 0
Q ss_pred cCCCceeeee-----eeeeeCCCeeEEEecC-CCcceeee-----cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCC
Q psy9327 213 SKHPIWKYCK-----PVKYCNPKHTLHICNR-KMEPLCNI-----HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 213 ~~~~v~~~~~-----~l~s~~~d~~I~i~d~-~~~~~~~~-----~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~ 280 (641)
....+..+.+ .+++++.++.|++||. ..+....+ .+...|.+++|+|+|.+|++|+.|+.+.+|+...
T Consensus 297 ~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 297 ELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp SSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred ccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 0001222222 1677888999999993 34444333 3567899999999999999999888888887543
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-34 Score=297.92 Aligned_cols=282 Identities=15% Similarity=0.248 Sum_probs=221.1
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC--cccccc-cc-cccCeEEEEEeCCCCEEEEeceeeEEee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN--TLLEKF-DE-HEGPVRGICFHNQQPIFVSGGKMIVMAY 77 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~--~~l~~~-~~-h~~~V~~i~fsp~~~~l~sgs~~~~~~~ 77 (641)
++.|++|.++|.+++|+|+ +|++|+.||+|++||+..+ +.+..+ .. |.++|.+++|+|++.+|++|+
T Consensus 7 ~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s------- 77 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS------- 77 (330)
T ss_dssp EEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEE-------
T ss_pred ceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEe-------
Confidence 5789999999999999997 8999999999999999875 344445 34 999999999999999999998
Q ss_pred eceeeecccCCcceeeEEEeeCCCeEEEEECC-------CCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEEC
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDYKIKVWNYK-------QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYW 150 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~-------t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~ 150 (641)
.|++|++||.. ..+++..+.+|.+.|.+++|+|++.+|++|+.|++|++||+
T Consensus 78 ---------------------~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~ 136 (330)
T 2hes_X 78 ---------------------FDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWET 136 (330)
T ss_dssp ---------------------TTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEEC
T ss_pred ---------------------CCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEec
Confidence 99999999985 34677889999999999999999999999999999999999
Q ss_pred CC----CeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCC--ceeeeccCCCceeeecccCCCceeeeeee
Q psy9327 151 QS----RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL--RKKNVAPGMGKLVLSMKSKHPIWKYCKPV 224 (641)
Q Consensus 151 ~~----~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~--~~~~~~~~~~~~v~s~~~~~~v~~~~~~l 224 (641)
+. .+++..+.+|...|.+++|+|++.+|++|+.|++|++||..++ ++...+.+|...|.++... |-.. ...+
T Consensus 137 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~-~~~l 214 (330)
T 2hes_X 137 DESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFD-KTEG-VFRL 214 (330)
T ss_dssp CTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC-CSSS-SCEE
T ss_pred cCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEec-CCCC-eeEE
Confidence 43 3678889999999999999999999999999999999999876 5677788888777764432 2100 1126
Q ss_pred eeeCCCeeEEEecCCC---------cceeeec--CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE---e-cc---
Q psy9327 225 KYCNPKHTLHICNRKM---------EPLCNIH--ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII---R-TL--- 286 (641)
Q Consensus 225 ~s~~~d~~I~i~d~~~---------~~~~~~~--~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I---~-~~--- 286 (641)
++++.|++|++||... .....+. +...|.+++|++++ ++++++.|+.+.+|+..++.. . ..
T Consensus 215 ~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h 293 (330)
T 2hes_X 215 CSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCH 293 (330)
T ss_dssp EEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTT
T ss_pred EEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEecccccc
Confidence 7888999999999332 1222232 56789999999775 799999999999999776632 1 11
Q ss_pred cc-ceEE--EEE--cCcEEEEEeCCCCeEEEEeCC
Q psy9327 287 DL-PIYI--TKI--KGNQVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 287 d~-p~~~--~~~--~g~~v~~~~~dg~i~v~~~~~ 316 (641)
.. ++.. +.. ++..+++++.||.+++|+++.
T Consensus 294 ~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 294 GVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred ccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 11 3332 223 467899999999999998764
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-34 Score=300.60 Aligned_cols=286 Identities=17% Similarity=0.269 Sum_probs=230.6
Q ss_pred ceeeccCCC-CeEEEEEccCCCeEEEEeCCCcEEEEECccCcccc---cccccccCeEEEEEeCCCCEEEEeceeeEEee
Q psy9327 2 LTKFETKSA-RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLE---KFDEHEGPVRGICFHNQQPIFVSGGKMIVMAY 77 (641)
Q Consensus 2 l~~~~~H~~-~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~---~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~ 77 (641)
+.++.+|.+ .|.+++|+|+|++||+|+.||+|+|||+.+++... ...+|...|.+++|+|++.+|++|+
T Consensus 8 ~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s------- 80 (345)
T 3fm0_A 8 LGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASAS------- 80 (345)
T ss_dssp EEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEE-------
T ss_pred eeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEE-------
Confidence 678999988 99999999999999999999999999998775332 2357999999999999999999998
Q ss_pred eceeeecccCCcceeeEEEeeCCCeEEEEECCCC--eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC--
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR--KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR-- 153 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~--~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~-- 153 (641)
.|++|++||..++ +++.++.+|.+.|.+++|+|++++|++|+.|++|++||++++
T Consensus 81 ---------------------~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~ 139 (345)
T 3fm0_A 81 ---------------------FDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE 139 (345)
T ss_dssp ---------------------TTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSC
T ss_pred ---------------------CCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCC
Confidence 9999999999877 467889999999999999999999999999999999999875
Q ss_pred -eeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCc--eeeeccCCCceeeecccCCCceeeeeeeeeeCCC
Q psy9327 154 -NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR--KKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPK 230 (641)
Q Consensus 154 -~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~--~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d 230 (641)
.++..+.+|...|.+++|+|++.+|++|+.|++|++||.++++ +...+.+|...|.++... |-- ..+++++.|
T Consensus 140 ~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~s-p~g---~~l~s~s~D 215 (345)
T 3fm0_A 140 YECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFD-PSG---QRLASCSDD 215 (345)
T ss_dssp EEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC-TTS---SEEEEEETT
T ss_pred eEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEEC-CCC---CEEEEEeCC
Confidence 4677889999999999999999999999999999999998775 345677777777664432 211 127788999
Q ss_pred eeEEEecCC--Cc--------------ceeeec--CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe--------E-
Q psy9327 231 HTLHICNRK--ME--------------PLCNIH--ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI--------I- 283 (641)
Q Consensus 231 ~~I~i~d~~--~~--------------~~~~~~--~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~--------I- 283 (641)
+.|++|+.. .. .+..+. +...|.+++|+|++..+++++.|+.+.+|+.+.+. +
T Consensus 216 ~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~ 295 (345)
T 3fm0_A 216 RTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLT 295 (345)
T ss_dssp SCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEE
T ss_pred CeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEE
Confidence 999999831 10 111221 46789999999999999999999999999754331 0
Q ss_pred -ecc---ccceEE--EEEcC-cEEEEEeCCCCeEEEEeCCcch
Q psy9327 284 -RTL---DLPIYI--TKIKG-NQVYYLDRECSPHVLRIDPTEF 319 (641)
Q Consensus 284 -~~~---d~p~~~--~~~~g-~~v~~~~~dg~i~v~~~~~~~~ 319 (641)
... ..++.. ++.++ ..+++++.||.+++|+..+.+.
T Consensus 296 ~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 296 AHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp EEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC---
T ss_pred eeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCC
Confidence 111 122332 33444 5899999999999999987554
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=290.63 Aligned_cols=282 Identities=21% Similarity=0.306 Sum_probs=233.2
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
..++.+|.+.|++++|+|++++|++|+.||.|++||..+++....+.+|..+|.+++|+|++.+|++|+
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------- 84 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSAS----------- 84 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-----------
T ss_pred EEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEEC-----------
Confidence 356889999999999999999999999999999999999999899999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~ 161 (641)
.|+.|++||+++++++..+.+|.+.|.+++|+|+++++++|+.|++|++||+++++++..+.+
T Consensus 85 -----------------~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 147 (312)
T 4ery_A 85 -----------------DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 147 (312)
T ss_dssp -----------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred -----------------CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecC
Confidence 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC-CCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CC
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG-MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RK 239 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~-~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~ 239 (641)
|...|.+++|+|++.++++++.|+.|++||+++++....+.. +...+.++. .+|--. .+++++.++.|++|| ..
T Consensus 148 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~l~~~~~d~~i~iwd~~~ 223 (312)
T 4ery_A 148 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK-FSPNGK---YILAATLDNTLKLWDYSK 223 (312)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEE-ECTTSS---EEEEEETTTEEEEEETTT
T ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEE-ECCCCC---EEEEEcCCCeEEEEECCC
Confidence 999999999999999999999999999999999887766543 223333221 111111 166788999999999 44
Q ss_pred CcceeeecC-C---cceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eeccc---cceE--EEEEcCcEEEEEe--CCC
Q psy9327 240 MEPLCNIHE-N---TRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLD---LPIY--ITKIKGNQVYYLD--REC 307 (641)
Q Consensus 240 ~~~~~~~~~-~---~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d---~p~~--~~~~~g~~v~~~~--~dg 307 (641)
...+..+.. . ..+......+++.++++++.++.+.+|+..++. +..+. .++. .++.++..+++++ .|+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~ 303 (312)
T 4ery_A 224 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDK 303 (312)
T ss_dssp TEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTC
T ss_pred CcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCc
Confidence 454544432 1 123333344678999999999999999987765 33332 2232 2556778888776 799
Q ss_pred CeEEEEeC
Q psy9327 308 SPHVLRID 315 (641)
Q Consensus 308 ~i~v~~~~ 315 (641)
.+++|+.+
T Consensus 304 ~i~~W~~d 311 (312)
T 4ery_A 304 TIKLWKSD 311 (312)
T ss_dssp CEEEEECC
T ss_pred cEEEecCC
Confidence 99999876
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=319.21 Aligned_cols=311 Identities=15% Similarity=0.172 Sum_probs=250.7
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc--ccccccccccCeEEEEEeCCCCEEEEecee-----eE
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT--LLEKFDEHEGPVRGICFHNQQPIFVSGGKM-----IV 74 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~--~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~-----~~ 74 (641)
+..|.+|.+.|++++|+|+|++||+|+.||+|+|||+.+++ ....+..|.++|.+++|+|++..+++++.. .+
T Consensus 52 ~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v 131 (611)
T 1nr0_A 52 TEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHV 131 (611)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEE
T ss_pred CeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEE
Confidence 46789999999999999999999999999999999987544 345677899999999999999999988732 22
Q ss_pred Eee------------eceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC
Q psy9327 75 MAY------------QGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD 142 (641)
Q Consensus 75 ~~~------------~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D 142 (641)
..| .+.+......|+....+++++.|++|++||..++++..++.+|.+.|.+++|+|++++|++|+.|
T Consensus 132 ~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D 211 (611)
T 1nr0_A 132 FLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGD 211 (611)
T ss_dssp EETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECC
Confidence 222 33455556677766779999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEECCCCeeEEEEc-------cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCC---ceeeecc
Q psy9327 143 QTIRIWYWQSRNCICVLT-------GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG---KLVLSMK 212 (641)
Q Consensus 143 g~I~vWd~~~~~~i~~l~-------~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~---~~v~s~~ 212 (641)
++|++||..+++++..+. +|.+.|.+++|+|++.+|+|++.|++|++||+.+++....+.... ....++.
T Consensus 212 ~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~ 291 (611)
T 1nr0_A 212 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGII 291 (611)
T ss_dssp SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEE
T ss_pred CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEE
Confidence 999999999999998884 799999999999999999999999999999999988877765321 1111111
Q ss_pred cCCCceeeeeeeeeeCCCeeEEEecCCC-cceeee-cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEeccc---
Q psy9327 213 SKHPIWKYCKPVKYCNPKHTLHICNRKM-EPLCNI-HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLD--- 287 (641)
Q Consensus 213 ~~~~v~~~~~~l~s~~~d~~I~i~d~~~-~~~~~~-~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d--- 287 (641)
.. ...+++++.++.+++||... .....+ .+...|.+++|+|+|.+|++++.|+.+.+|+..++......
T Consensus 292 ~~------~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~ 365 (611)
T 1nr0_A 292 WT------KQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDV 365 (611)
T ss_dssp EC------SSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCS
T ss_pred Ec------CCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccC
Confidence 10 11266788999999999443 333333 35789999999999999999999999999998776543221
Q ss_pred --cceEEEE-EcCcEEEEEeCCCCeEEEEeCCcc
Q psy9327 288 --LPIYITK-IKGNQVYYLDRECSPHVLRIDPTE 318 (641)
Q Consensus 288 --~p~~~~~-~~g~~v~~~~~dg~i~v~~~~~~~ 318 (641)
.++.... ..+..+++.+.|+.+++|+.....
T Consensus 366 h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~ 399 (611)
T 1nr0_A 366 HATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSG 399 (611)
T ss_dssp CSSCEEEEEECTTSCEEEEETTTEEEEECSSSSS
T ss_pred CcceEEEEEECCCCcEEEEEcCCceEEeecCCcc
Confidence 1122211 246688999999999999887644
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-34 Score=307.29 Aligned_cols=245 Identities=22% Similarity=0.377 Sum_probs=221.6
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
++.+++|.+.|.+++|+|++++|++|+.||+|++||+.+++.+..+.+|...|.+++|+|++.++++|+
T Consensus 143 ~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s----------- 211 (410)
T 1vyh_C 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS----------- 211 (410)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEE-----------
T ss_pred EEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEe-----------
Confidence 568899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~ 161 (641)
.|++|++||++++.++.++.+|...|.+++|+|++.++++|+.|++|++||++++++...+.+
T Consensus 212 -----------------~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~ 274 (410)
T 1vyh_C 212 -----------------RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274 (410)
T ss_dssp -----------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred -----------------CCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecC
Confidence 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEEEecC--------------------CCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeee
Q psy9327 162 HNHYVMCAQFHPT--------------------DDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYC 221 (641)
Q Consensus 162 h~~~V~sl~fsp~--------------------g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~ 221 (641)
|...|.+++|+|+ +.++++|+.|++|++||++++++...+.+|...|.++.. +|--
T Consensus 275 h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~-~~~g--- 350 (410)
T 1vyh_C 275 HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF-HSGG--- 350 (410)
T ss_dssp CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE-CSSS---
T ss_pred CCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEE-cCCC---
Confidence 9999999999996 679999999999999999999999999888877776442 2211
Q ss_pred eeeeeeCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcC
Q psy9327 222 KPVKYCNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 222 ~~l~s~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~ 278 (641)
..+++++.|+.|++|| .....+..+. +...|.+++|+|++.++++|+.|+.+.+|+.
T Consensus 351 ~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 351 KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp SCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred CEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 1167888999999999 4455555554 5778999999999999999999999998863
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-33 Score=317.57 Aligned_cols=288 Identities=17% Similarity=0.193 Sum_probs=234.7
Q ss_pred eeeccCCCCeEEEEEccCCC-eEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 3 TKFETKSARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
..+.+|.+.|.+++|+|+++ .|++|+.|++|++||..+++.+..+.+|.+.|.+++|+|++.+|++|+
T Consensus 141 ~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s----------- 209 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTG----------- 209 (611)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEE-----------
T ss_pred ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEE-----------
Confidence 46789999999999999987 599999999999999999988899999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc-------cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL-------GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN 154 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~-------~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~ 154 (641)
.|++|++||..+++++..+. +|.+.|.+++|+|++.+|++|+.|++|++||+++++
T Consensus 210 -----------------~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 210 -----------------GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLK 272 (611)
T ss_dssp -----------------TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred -----------------CCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 99999999999999988884 799999999999999999999999999999998876
Q ss_pred eEE-------------------------------------------EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEe
Q psy9327 155 CIC-------------------------------------------VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191 (641)
Q Consensus 155 ~i~-------------------------------------------~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD 191 (641)
++. .+.+|...|++++|+|++.+|++++.|++|++||
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd 352 (611)
T 1nr0_A 273 VEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWD 352 (611)
T ss_dssp EEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Confidence 544 3458999999999999999999999999999999
Q ss_pred cCCCceeeec-cCCCceeeeccc---------------------------------------------------------
Q psy9327 192 ISGLRKKNVA-PGMGKLVLSMKS--------------------------------------------------------- 213 (641)
Q Consensus 192 ~~~~~~~~~~-~~~~~~v~s~~~--------------------------------------------------------- 213 (641)
+.+++....+ .+|...+.++..
T Consensus 353 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~ 432 (611)
T 1nr0_A 353 ISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYK 432 (611)
T ss_dssp TTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESS
T ss_pred CCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCc
Confidence 9987765544 222222211100
Q ss_pred ---------------CCCceeeeee-----eeeeCCCeeEEEecCCCcc---eeeecCCcceEEEEEcCCccEEEEecCC
Q psy9327 214 ---------------KHPIWKYCKP-----VKYCNPKHTLHICNRKMEP---LCNIHENTRVKSGAWDESGVFIYTTSNH 270 (641)
Q Consensus 214 ---------------~~~v~~~~~~-----l~s~~~d~~I~i~d~~~~~---~~~~~~~~~I~sla~~p~g~~L~t~s~~ 270 (641)
...+..+.++ +++++.|+.|++||..... .....+...|.+++|+|+|.+|++++.+
T Consensus 433 ~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d 512 (611)
T 1nr0_A 433 HIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQS 512 (611)
T ss_dssp EEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCC
Confidence 0011222222 6788899999999944322 2334567899999999999999999999
Q ss_pred eEEEEEcCCC-CeEec---c---ccceE--EEEEcCcEEEEEeCCCCeEEEEeCCcc
Q psy9327 271 IKYAIVNGDH-GIIRT---L---DLPIY--ITKIKGNQVYYLDRECSPHVLRIDPTE 318 (641)
Q Consensus 271 ~k~~l~~~~~-g~I~~---~---d~p~~--~~~~~g~~v~~~~~dg~i~v~~~~~~~ 318 (641)
+.+.+|+..+ +.+.. + ..++. .+..++..+++++.|+.+++|+++...
T Consensus 513 ~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 513 RKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp SCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred CCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcc
Confidence 9999998766 44422 1 11222 255678999999999999999988643
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-33 Score=291.28 Aligned_cols=281 Identities=14% Similarity=0.237 Sum_probs=227.9
Q ss_pred ceeeccCCCCeEEEEE-----cc-CCCeEEEEeCCCcEEEEECccC-------cccccccccccCeEEEEEeCCCCEEEE
Q psy9327 2 LTKFETKSARVKGLSF-----HP-KRPWILSSLHNGVIQLWDYRMN-------TLLEKFDEHEGPVRGICFHNQQPIFVS 68 (641)
Q Consensus 2 l~~~~~H~~~V~~l~f-----sp-dg~~Lasg~~dg~I~iWD~~~~-------~~l~~~~~h~~~V~~i~fsp~~~~l~s 68 (641)
...|++|.+.|++++| ++ ++++|++|+.||+|++||+..+ .....+.+|..+|.+++|+|++.++++
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence 4678999999999999 77 9999999999999999998653 345667899999999999999999999
Q ss_pred eceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEE
Q psy9327 69 GGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148 (641)
Q Consensus 69 gs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vW 148 (641)
|+ .|++|++||+++++.+..+.+|.+.|.+++|+|++.+|++|+.|++|++|
T Consensus 94 ~s----------------------------~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~w 145 (343)
T 2xzm_R 94 SS----------------------------WDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLW 145 (343)
T ss_dssp EE----------------------------TTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEE
T ss_pred Ec----------------------------CCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEE
Confidence 98 99999999999999999999999999999999999999999999999999
Q ss_pred ECCCCeeEEEEc---cCCCCEEEEEEecCC----------CEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCC
Q psy9327 149 YWQSRNCICVLT---GHNHYVMCAQFHPTD----------DIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKH 215 (641)
Q Consensus 149 d~~~~~~i~~l~---~h~~~V~sl~fsp~g----------~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~ 215 (641)
|+.. .+..... +|...|.+++|+|++ .++++++.|++|++||. ..+....+.+|...+.++...
T Consensus 146 d~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s- 222 (343)
T 2xzm_R 146 NILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSIS- 222 (343)
T ss_dssp ESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEEC-
T ss_pred eccC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEEC-
Confidence 9984 3444443 799999999999987 79999999999999994 455566667776666654322
Q ss_pred CceeeeeeeeeeCCCeeEEEecC-C-CcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE---eccc---
Q psy9327 216 PIWKYCKPVKYCNPKHTLHICNR-K-MEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII---RTLD--- 287 (641)
Q Consensus 216 ~v~~~~~~l~s~~~d~~I~i~d~-~-~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I---~~~d--- 287 (641)
|-- ..+++++.|+.|++||. . ......+.....|.+++|+|++.++++++ ++.+.+|+..++.. ..+.
T Consensus 223 ~~g---~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~-d~~v~iw~~~~~~~~~~~~~~~~~ 298 (343)
T 2xzm_R 223 PNG---KYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGT-DQGVKIFNLMTQSKAPVCTIEAEP 298 (343)
T ss_dssp TTS---SEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEE-SSCEEEEESSSCCSCSEEECCCCS
T ss_pred CCC---CEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEEC-CCCEEEEEeCCCCCCceEEeecCc
Confidence 111 12778889999999994 3 33444555567899999999999887654 56688998655431 1221
Q ss_pred -----------cce--EEEEEcCcEEEEEeCCCCeEEEEeCCc
Q psy9327 288 -----------LPI--YITKIKGNQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 288 -----------~p~--~~~~~~g~~v~~~~~dg~i~v~~~~~~ 317 (641)
.++ ..+..++..+++++.||.+++|+++++
T Consensus 299 ~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 299 ITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp GGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred chhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 112 235677899999999999999998754
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=294.11 Aligned_cols=243 Identities=16% Similarity=0.232 Sum_probs=220.1
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
..+++|...|.+++|+|+++++++|+.||+|++||+.+++.+..+..|...+.+++|+|++.+|++|+
T Consensus 74 ~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~------------ 141 (321)
T 3ow8_A 74 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGT------------ 141 (321)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEEC------------
T ss_pred eeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEc------------
Confidence 36889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h 162 (641)
.|+.|++||+++++....+..|...|.+++|+|++++|++|+.|+.|++||+++++++..+.+|
T Consensus 142 ----------------~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h 205 (321)
T 3ow8_A 142 ----------------HVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 205 (321)
T ss_dssp ----------------TTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred ----------------CCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCc
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKME 241 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~ 241 (641)
...|++++|+|++.+|++|+.|++|++||+++++....+.+|...+.++... |-- ..+++++.|+.|++|| ....
T Consensus 206 ~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s-p~~---~~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 206 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC-PDD---THFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp SSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEEC-TTS---SEEEEEETTSCEEEEETTTTE
T ss_pred CCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEEC-CCC---CEEEEEeCCCcEEEEeCCCCE
Confidence 9999999999999999999999999999999999998998888777765432 211 1267888999999999 4556
Q ss_pred ceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 242 PLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 242 ~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
.+..+. +...|.+++|+|+|.+|++++.|+.+.+|+
T Consensus 282 ~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 282 CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred EEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 666554 578999999999999999988877777775
|
| >3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-36 Score=299.03 Aligned_cols=165 Identities=45% Similarity=0.759 Sum_probs=153.8
Q ss_pred CCcHHHHHHHHHhhcceeecCcchHHHHHHhhcCceeecCCCCCCceeeccCCC-CCCCCCCCCCcccccHHHHHHHHHh
Q psy9327 425 EGSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTRK-GPGIKENSHPATNIKLEQLIAKIQQ 503 (641)
Q Consensus 425 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (641)
+|+||+||++|++|+|++||+|+|++|++.|.+++++++++|++|++..++.|| +....++.+|++++++++|.++++.
T Consensus 29 AGsFe~A~~lLnrQ~Givnf~PLk~~F~~~y~~s~~~l~~~~~~p~l~~~~~r~~~~~~~~~~lP~i~~~l~~l~~~Lk~ 108 (320)
T 3mkr_B 29 AGSFETAMRLLHDQVGVTQFGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQL 108 (320)
T ss_dssp TTCHHHHHHHHHHHSCBCCCGGGHHHHHHHHTTSCEEECSSTTSCCEEECCBTTTTTCCSSSCCBCCCCCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHhCccCchhhHHHHHHHHHHHhhhccCCCCCCcchhhhcCCccccccccCCCCcccCHHHHHHHHHH
Confidence 499999999999999999999999999999999999999999999999999999 5555556799999999999999999
Q ss_pred hhhhcccccHHHHHHHHHHHhhhcceeeecCHHHHHHHHHHHHHHhHHHHHHHHHH--HhhcCC-Ccccccccccceeee
Q psy9327 504 CYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQIINICKEYIVGTNHIK--YAIVNG-DHGIIRTLDLPIYIT 580 (641)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~--~~l~~~-d~~~~r~le~~~y~t 580 (641)
||+++|+|||++|++.||.+||+++|++|++.+|..++|++|.+||||++||++|+ +.++.+ .++++|+|||++|||
T Consensus 109 gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELAAYFT 188 (320)
T 3mkr_B 109 CYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMAAYFT 188 (320)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999 445322 156799999999999
Q ss_pred eeCcceeEE
Q psy9327 581 KIKGNQVYY 589 (641)
Q Consensus 581 ~~~~~~~~~ 589 (641)
||++|++|-
T Consensus 189 ~c~Lqp~H~ 197 (320)
T 3mkr_B 189 HSNLQPVHM 197 (320)
T ss_dssp TSCCCHHHH
T ss_pred cCCCcHHHH
Confidence 999999884
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-33 Score=294.10 Aligned_cols=279 Identities=12% Similarity=0.157 Sum_probs=217.0
Q ss_pred ccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC-----------cccccccccccCeEEEEEeCCCCEEEEeceeeE
Q psy9327 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-----------TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIV 74 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~-----------~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~ 74 (641)
..|...|.+++|+|||.+|++++ |+++++||.... ........|..+|.+++|+|++ .+++|+
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s---- 100 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVAS---- 100 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEE----
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEE----
Confidence 35778899999999999998887 778888874211 1111122467789999999986 567776
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEE----EccCCCCeEEEEEccCCCEEEEEeCCCeEEEEEC
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT----LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYW 150 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~----~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~ 150 (641)
.||+|++||+.+++.+.. +.+|.+.|++++|+|++++|++|+.|++|++||+
T Consensus 101 ------------------------~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~ 156 (344)
T 4gqb_B 101 ------------------------DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDL 156 (344)
T ss_dssp ------------------------TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred ------------------------CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 899999999999875443 4589999999999999999999999999999999
Q ss_pred CCCeeEEEEccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEecCCCceeeeccC--CCceeeecccCCCceeeeeeeeee
Q psy9327 151 QSRNCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPG--MGKLVLSMKSKHPIWKYCKPVKYC 227 (641)
Q Consensus 151 ~~~~~i~~l~~h~~~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~~~~~~~~~~--~~~~v~s~~~~~~v~~~~~~l~s~ 227 (641)
++++++.++.+|.+.|++++|+|++ .+++||+.|++|++||+++++....+.. ++..+.++... |.- ...++++
T Consensus 157 ~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-p~~--~~~l~sg 233 (344)
T 4gqb_B 157 AQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWH-PQQ--SEVFVFG 233 (344)
T ss_dssp TTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEEC-SSC--TTEEEEE
T ss_pred CCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeec-CCC--CcceEEe
Confidence 9999999999999999999999987 5789999999999999999888776643 33334443221 100 0015678
Q ss_pred CCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCc-cEEEEecCCeEEEEEcCCCCeEeccc---cceEE--EEEcCc-
Q psy9327 228 NPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESG-VFIYTTSNHIKYAIVNGDHGIIRTLD---LPIYI--TKIKGN- 298 (641)
Q Consensus 228 ~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g-~~L~t~s~~~k~~l~~~~~g~I~~~d---~p~~~--~~~~g~- 298 (641)
+.|+.|++|| .....+..+. +...|.+++|+|+| .+|++++.|+.+.+|+...+.+..+. .++.. ++.++.
T Consensus 234 ~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~ 313 (344)
T 4gqb_B 234 DENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHS 313 (344)
T ss_dssp ETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTT
T ss_pred ccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCe
Confidence 8999999999 5566666665 57899999999997 57999999999999998888765432 23333 334454
Q ss_pred EEEEEeCCCCeEEEEeCCc
Q psy9327 299 QVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 299 ~v~~~~~dg~i~v~~~~~~ 317 (641)
.+++++.|+++++|.+++.
T Consensus 314 llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 314 LLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp EEEEEETTSCEEEEECCC-
T ss_pred EEEEEcCCCeEEEEECCCC
Confidence 5678999999999999864
|
| >3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=298.05 Aligned_cols=162 Identities=25% Similarity=0.372 Sum_probs=152.6
Q ss_pred CCcHHHHHHHHHhhcceeecCcchHHHHHHhhcCceeecCCC-CCCceeeccCCC-CCCCCCCCCCcccccHHHHHHHHH
Q psy9327 425 EGSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLP-LLAPVMAFPTRK-GPGIKENSHPATNIKLEQLIAKIQ 502 (641)
Q Consensus 425 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 502 (641)
+|+||+||++|++|+|++||+|+|++|++.|.+++++++++| .+|++..++.|| +....++.+|+++ ++.+|.++++
T Consensus 41 AGsFetAm~lLnrQvGivnf~PLk~~F~~~y~~s~~~l~~~~~~lp~l~~~~~r~~~e~~~~~~lP~i~-~l~~L~~~Lk 119 (325)
T 3mv2_A 41 AGAFDAAVQALSKQVGVVKLEPLKKYFTNIYEGCRTYIPSTPCELPAQLGYVRAYDDTVSEDQILPYVP-GLDVVNEKMN 119 (325)
T ss_dssp TTCHHHHHHHHHHHHCBCCCGGGHHHHHHHHHHTEEEECCSSTTSCCEEEECBSSCSSSCGGGCCBCCC-CHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHhCccCchhhHHHHHHHHHHHhhhcccCCCCCCcchhhhcCCccccccccCCCCCC-CHHHHHHHHH
Confidence 499999999999999999999999999999999999999999 999999999999 5555556799999 9999999999
Q ss_pred hhhhhcccccHHHHHHHHHHHhhhcceeeecCHHHHHHHHHHHHHHhHHHHHHHHHH--HhhcCCCcccccccccceeee
Q psy9327 503 QCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQIINICKEYIVGTNHIK--YAIVNGDHGIIRTLDLPIYIT 580 (641)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~--~~l~~~d~~~~r~le~~~y~t 580 (641)
+||+++|+|||++|++.||.+|++++|++|++.+|+.++|++|.+||||++||++|+ ++| ++++++|+|||++|||
T Consensus 120 ~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l--~~~~~kR~lELAAYFT 197 (325)
T 3mv2_A 120 EGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSL--KEGNTVRMLELAAYFT 197 (325)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--CTTCHHHHHHHHHHGG
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CcccHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999 455 3357899999999999
Q ss_pred eeCcceeEE
Q psy9327 581 KIKGNQVYY 589 (641)
Q Consensus 581 ~~~~~~~~~ 589 (641)
||++|++|-
T Consensus 198 ~c~LQp~H~ 206 (325)
T 3mv2_A 198 KAKLSPIHR 206 (325)
T ss_dssp GSCCCHHHH
T ss_pred cCCCcHHHH
Confidence 999999884
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-33 Score=292.30 Aligned_cols=244 Identities=17% Similarity=0.191 Sum_probs=203.1
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccc----cccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF----DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~----~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
.|.+.|.+++|+|++ .+++|+.||+|+|||+.+++.+..+ .+|.+.|.+++|+|++.+|++|+
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs------------ 146 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGS------------ 146 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEE------------
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEe------------
Confidence 456789999999986 6889999999999999988765543 37999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeeEEEEc-
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCICVLT- 160 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~~i~~l~- 160 (641)
.|++|++||+++++++.++.+|.+.|.+++|+|++. +|++|+.|++|++||++++++...+.
T Consensus 147 ----------------~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~ 210 (344)
T 4gqb_B 147 ----------------KDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGC 210 (344)
T ss_dssp ----------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-
T ss_pred ----------------CCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeec
Confidence 999999999999999999999999999999999875 78999999999999999999888774
Q ss_pred -cCCCCEEEEEEecC-CCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC
Q psy9327 161 -GHNHYVMCAQFHPT-DDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 161 -~h~~~V~sl~fsp~-g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~ 238 (641)
.|...+.+++|+|+ +.++++|+.||+|++||+++++.+..+.+|...|.++... |--. .-+++++.|++|++||.
T Consensus 211 ~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fs-p~g~--~~lasgs~D~~i~vwd~ 287 (344)
T 4gqb_B 211 SAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFS-PHSV--PFLASLSEDCSLAVLDS 287 (344)
T ss_dssp ---CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEEC-SSSS--CCEEEEETTSCEEEECT
T ss_pred ceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEc-cCCC--eEEEEEeCCCeEEEEEC
Confidence 46667999999995 5789999999999999999999999999988888775432 2100 01678889999999994
Q ss_pred C-CcceeeecCCcceEEEEEcCCcc-EEEEecCCeEEEEEcCCCCe
Q psy9327 239 K-MEPLCNIHENTRVKSGAWDESGV-FIYTTSNHIKYAIVNGDHGI 282 (641)
Q Consensus 239 ~-~~~~~~~~~~~~I~sla~~p~g~-~L~t~s~~~k~~l~~~~~g~ 282 (641)
+ .+.+....|...|.+++|+|++. ++++++.|+.+.+|...+..
T Consensus 288 ~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 288 SLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp TCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred CCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 4 44444445688999999999986 56788888888888765543
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-33 Score=292.67 Aligned_cols=279 Identities=14% Similarity=0.209 Sum_probs=216.5
Q ss_pred ccCCCCeEEEEEccCCCeEEEEeC------CCcEEEEECccCccccc----ccccccCeEEEEEeCCCCEEEEeceeeEE
Q psy9327 6 ETKSARVKGLSFHPKRPWILSSLH------NGVIQLWDYRMNTLLEK----FDEHEGPVRGICFHNQQPIFVSGGKMIVM 75 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~~Lasg~~------dg~I~iWD~~~~~~l~~----~~~h~~~V~~i~fsp~~~~l~sgs~~~~~ 75 (641)
.+|+..|++++|||||.+|++|+. ||.|++|+..++..... ...|...|.+++|+|++.+++ ++
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~-~s----- 112 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILV-AS----- 112 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEE-EE-----
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEE-EE-----
Confidence 469999999999999999999997 78899999877654333 346889999999999986554 54
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeE----EEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCI----FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~----~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~ 151 (641)
.|++|++||+.+++.. ....+|.+.|++++|+|++++|++|+.|++|++||++
T Consensus 113 -----------------------~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~ 169 (357)
T 4g56_B 113 -----------------------DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLS 169 (357)
T ss_dssp -----------------------TTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred -----------------------CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 7999999999988654 3455899999999999999999999999999999999
Q ss_pred CCeeEEEEccCCCCEEEEEEecCCC-EEEEEeCCCeEEEEecCCCceeeeccC--CCceeeecccCCCceeeeeeeeeeC
Q psy9327 152 SRNCICVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKNVAPG--MGKLVLSMKSKHPIWKYCKPVKYCN 228 (641)
Q Consensus 152 ~~~~i~~l~~h~~~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~~~~~~~~~~--~~~~v~s~~~~~~v~~~~~~l~s~~ 228 (641)
+++++..+.+|...|++++|+|++. .+++++.|++|++||+++++....... +...+.++.. +|--. ..+++++
T Consensus 170 ~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~-sp~~~--~~la~g~ 246 (357)
T 4g56_B 170 QKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTW-HPEKD--DTFACGD 246 (357)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEE-CTTST--TEEEEEE
T ss_pred CCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhh-hhccc--ceEEEee
Confidence 9999999999999999999999874 789999999999999999887665543 3334444332 11100 1156778
Q ss_pred CCeeEEEec-CCCcceeeec-CCcceEEEEEcCCc-cEEEEecCCeEEEEEcCCCCeEe-cc--ccceEE--EEE-cCcE
Q psy9327 229 PKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESG-VFIYTTSNHIKYAIVNGDHGIIR-TL--DLPIYI--TKI-KGNQ 299 (641)
Q Consensus 229 ~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g-~~L~t~s~~~k~~l~~~~~g~I~-~~--d~p~~~--~~~-~g~~ 299 (641)
.++.|++|| .....+..+. +...|.+++|+|++ .+|++++.|+.+.+|+.+.+.+. .+ ..++.. +++ ++..
T Consensus 247 ~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~ 326 (357)
T 4g56_B 247 ETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSK 326 (357)
T ss_dssp SSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTE
T ss_pred cccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCE
Confidence 999999999 4555555554 47789999999987 68999999999999998887654 22 223333 333 5789
Q ss_pred EEEEeCCCCeEEEEeCC
Q psy9327 300 VYYLDRECSPHVLRIDP 316 (641)
Q Consensus 300 v~~~~~dg~i~v~~~~~ 316 (641)
+++++.||.+++|++..
T Consensus 327 l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 327 FTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp EEEEETTSCEEEEECC-
T ss_pred EEEEcCCCeEEEEECCC
Confidence 99999999999999875
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-32 Score=289.24 Aligned_cols=276 Identities=18% Similarity=0.281 Sum_probs=225.3
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccccccc------------------CeEEEEEeCCCCEEEE
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEG------------------PVRGICFHNQQPIFVS 68 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~------------------~V~~i~fsp~~~~l~s 68 (641)
+|.+.|.+++|+|+|++|++|+ ++++++|++.+++.+..+..|.. .|.+++|+|++.+|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999986 68999999999988777765432 4999999999999999
Q ss_pred eceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEE
Q psy9327 69 GGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148 (641)
Q Consensus 69 gs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vW 148 (641)
|+ .|++|++||+.+++.+..+.+|.+.|.+++|+|++.+|++|+.|++|++|
T Consensus 141 ~~----------------------------~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iw 192 (393)
T 1erj_A 141 GA----------------------------EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIW 192 (393)
T ss_dssp EE----------------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred Ec----------------------------CCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEE
Confidence 98 99999999999999999999999999999999999999999999999999
Q ss_pred ECCCCeeEEEEccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEecCCCceeeec-------cCCCceeeecccCCCceee
Q psy9327 149 YWQSRNCICVLTGHNHYVMCAQFHP-TDDIVVSASLDQTIRVWDISGLRKKNVA-------PGMGKLVLSMKSKHPIWKY 220 (641)
Q Consensus 149 d~~~~~~i~~l~~h~~~V~sl~fsp-~g~~lvSgs~DgtI~IWD~~~~~~~~~~-------~~~~~~v~s~~~~~~v~~~ 220 (641)
|++++++...+. |...+.+++|+| ++.++++|+.|++|++||+++++....+ .+|...+.++..... -
T Consensus 193 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~-g-- 268 (393)
T 1erj_A 193 DLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD-G-- 268 (393)
T ss_dssp ETTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT-S--
T ss_pred ECCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCC-C--
Confidence 999999988886 667899999999 8999999999999999999998876655 344455554332110 0
Q ss_pred eeeeeeeCCCeeEEEecCCC-------------cce-eeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE-ec
Q psy9327 221 CKPVKYCNPKHTLHICNRKM-------------EPL-CNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII-RT 285 (641)
Q Consensus 221 ~~~l~s~~~d~~I~i~d~~~-------------~~~-~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I-~~ 285 (641)
..+++++.|+.|++||... ... ....+...|.+++|+|++.++++++.|+.+.+|+..++.. ..
T Consensus 269 -~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~ 347 (393)
T 1erj_A 269 -QSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLM 347 (393)
T ss_dssp -SEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEE
T ss_pred -CEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEE
Confidence 1267888999999999432 111 2223567899999999999999999999999999877643 23
Q ss_pred c---ccceEEEEE--------cCcEEEEEeCCCCeEEEEeCC
Q psy9327 286 L---DLPIYITKI--------KGNQVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 286 ~---d~p~~~~~~--------~g~~v~~~~~dg~i~v~~~~~ 316 (641)
+ ..++..... +++.+++++.||.+++|++..
T Consensus 348 l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 348 LQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred ECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 2 223332221 467899999999999998864
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=283.55 Aligned_cols=250 Identities=15% Similarity=0.213 Sum_probs=208.2
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECcc--CcccccccccccCeEEEEEeC--CCCEEEEeceeeEEe
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRM--NTLLEKFDEHEGPVRGICFHN--QQPIFVSGGKMIVMA 76 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~--~~~l~~~~~h~~~V~~i~fsp--~~~~l~sgs~~~~~~ 76 (641)
|+..+.+|.+.|.+++|+|+|++|++|+.||+|+|||+.. ++.+..+.+|.++|.+++|+| ++.+|++|+
T Consensus 1 ~~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s------ 74 (297)
T 2pm7_B 1 MVVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS------ 74 (297)
T ss_dssp -CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEE------
T ss_pred CceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEc------
Confidence 6788999999999999999999999999999999999974 467788999999999999986 388999998
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe--eEEEEccCCCCeEEEEEccC--CCEEEEEeCCCeEEEEECCC
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK--CIFTLLGHLDYIRTTFFHHE--YPWILSASDDQTIRIWYWQS 152 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~--~~~~~~~h~~~V~~v~fsp~--~~~l~sgs~Dg~I~vWd~~~ 152 (641)
.|++|++||+++++ .+..+.+|...|.+++|+|+ +.+|++|+.|++|++||+++
T Consensus 75 ----------------------~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~ 132 (297)
T 2pm7_B 75 ----------------------YDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKE 132 (297)
T ss_dssp ----------------------TTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCS
T ss_pred ----------------------CCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecC
Confidence 99999999999874 56778899999999999997 88999999999999999987
Q ss_pred Ce--eEEEEccCCCCEEEEEEecC-------------CCEEEEEeCCCeEEEEecCCCc----eeeeccCCCceeeeccc
Q psy9327 153 RN--CICVLTGHNHYVMCAQFHPT-------------DDIVVSASLDQTIRVWDISGLR----KKNVAPGMGKLVLSMKS 213 (641)
Q Consensus 153 ~~--~i~~l~~h~~~V~sl~fsp~-------------g~~lvSgs~DgtI~IWD~~~~~----~~~~~~~~~~~v~s~~~ 213 (641)
+. ....+.+|...|.+++|+|+ +..|++|+.|++|++||+++++ ....+.+|...|.++..
T Consensus 133 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~ 212 (297)
T 2pm7_B 133 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 212 (297)
T ss_dssp SSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred CCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEE
Confidence 63 24667899999999999997 5799999999999999998765 55677788888877553
Q ss_pred CCCceeeeeeeeeeCCCeeEEEecCCCc---c-eeee---cCCcceEEEEEcCCccEEEEecCCeEEEEEcCC
Q psy9327 214 KHPIWKYCKPVKYCNPKHTLHICNRKME---P-LCNI---HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 214 ~~~v~~~~~~l~s~~~d~~I~i~d~~~~---~-~~~~---~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~ 279 (641)
. |-......+++++.|++|++||.+.. . ...+ .+...|.+++|+|+|.+|++++.|+.+.+|+..
T Consensus 213 s-p~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 213 S-PTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp C-CCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred C-CCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 2 21100122778899999999994321 1 1122 236789999999999999999999999998743
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-32 Score=284.39 Aligned_cols=243 Identities=14% Similarity=0.210 Sum_probs=208.0
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc----ccccccccccCeEEEEEeCCCCEEEEeceeeEEee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT----LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAY 77 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~----~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~ 77 (641)
+..+..|.+.|.+++|+|++++|++|+.||.|++||+.+++ ....+.+|.+.|.++.|++++. +++++
T Consensus 90 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s------- 161 (340)
T 1got_B 90 VHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSS------- 161 (340)
T ss_dssp EEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEE-------
T ss_pred ceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEE-------
Confidence 35678899999999999999999999999999999997653 4556778999999999999875 77776
Q ss_pred eceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~ 157 (641)
.|++|++||+++++++.++.+|.+.|.+++|+|++.++++|+.|++|++||++++.++.
T Consensus 162 ---------------------~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~ 220 (340)
T 1got_B 162 ---------------------GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQ 220 (340)
T ss_dssp ---------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred ---------------------CCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEE
Confidence 89999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCC--ceeeecccCCCceeeeeeeeeeCCCeeEEE
Q psy9327 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG--KLVLSMKSKHPIWKYCKPVKYCNPKHTLHI 235 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~--~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i 235 (641)
++.+|...|++++|+|++..|++|+.||+|++||+++++....+...+ ..+.++. ++|-- ..+++++.++.|++
T Consensus 221 ~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~-~s~~g---~~l~~g~~d~~i~v 296 (340)
T 1got_B 221 TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVS-FSKSG---RLLLAGYDDFNCNV 296 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEE-ECTTS---SEEEEEETTSEEEE
T ss_pred EEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEE-ECCCC---CEEEEECCCCeEEE
Confidence 999999999999999999999999999999999999887766554221 2333322 11111 12678889999999
Q ss_pred ec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 236 CN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 236 ~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
|| .....+..+. +..+|.+++|+|+|.+|++++.|+.+.+|+
T Consensus 297 wd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 297 WDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99 4555555554 578999999999999999999999888885
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-31 Score=280.19 Aligned_cols=290 Identities=14% Similarity=0.183 Sum_probs=243.8
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
.+|.+|.+.|++++|+|++++|++|+.||.|++||+.+++.+..+..|.++|.+++|+|++.+|++++
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~------------ 93 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGS------------ 93 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE------------
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEe------------
Confidence 46899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC-----CeEEEEECCCCe---
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD-----QTIRIWYWQSRN--- 154 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D-----g~I~vWd~~~~~--- 154 (641)
.|+.|++||+.+++.+..+. |...|.+++|+|++.++++++.+ +.|++||+....
T Consensus 94 ----------------~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~ 156 (369)
T 3zwl_B 94 ----------------ADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATH 156 (369)
T ss_dssp ----------------TTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTC
T ss_pred ----------------CCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccce
Confidence 99999999999999999888 89999999999999999999999 999999987653
Q ss_pred --------eEEEEccCCC--CEEEEEEecCCCEEEEEeCCCeEEEEecCC-CceeeeccCCCceeeecccCCCceeeeee
Q psy9327 155 --------CICVLTGHNH--YVMCAQFHPTDDIVVSASLDQTIRVWDISG-LRKKNVAPGMGKLVLSMKSKHPIWKYCKP 223 (641)
Q Consensus 155 --------~i~~l~~h~~--~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~-~~~~~~~~~~~~~v~s~~~~~~v~~~~~~ 223 (641)
.+..+..|.+ .+.+++|+|++..+++++.||.|++||+++ .+....+..+...+.++... |-- ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~-~~~---~~ 232 (369)
T 3zwl_B 157 ELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFS-PDL---TY 232 (369)
T ss_dssp CEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEEC-TTS---SE
T ss_pred eecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEEC-CCC---CE
Confidence 3445566776 999999999999999999999999999998 67777777777666654422 111 11
Q ss_pred eeeeCCCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCe--------------EEEEEcCCCCeE-ecc-
Q psy9327 224 VKYCNPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHI--------------KYAIVNGDHGII-RTL- 286 (641)
Q Consensus 224 l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~--------------k~~l~~~~~g~I-~~~- 286 (641)
+++++.++.|.+|| ........+.....+.+++|+|++.++++++.++ .+.+|+...+.. ..+
T Consensus 233 l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 312 (369)
T 3zwl_B 233 FITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQ 312 (369)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEE
T ss_pred EEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhee
Confidence 66778999999999 5567777777889999999999999999999877 677777655432 221
Q ss_pred --ccceEE--EEEcCcEEEEEeCCCCeEEEEeCCcchhhhHHH
Q psy9327 287 --DLPIYI--TKIKGNQVYYLDRECSPHVLRIDPTEFKFKLAL 325 (641)
Q Consensus 287 --d~p~~~--~~~~g~~v~~~~~dg~i~v~~~~~~~~~~k~~l 325 (641)
..++.. +..++..+++++.||.+++|+++.....++...
T Consensus 313 ~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~ 355 (369)
T 3zwl_B 313 GHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFDFKYDV 355 (369)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHHTCCCHH
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccchhHHHH
Confidence 223332 445788999999999999999998766554443
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-31 Score=308.77 Aligned_cols=280 Identities=18% Similarity=0.296 Sum_probs=234.9
Q ss_pred eeeccCCCCeEEEEEccCC-CeEEEEeCCCcEEEEECccCc-----ccccccccccCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 3 TKFETKSARVKGLSFHPKR-PWILSSLHNGVIQLWDYRMNT-----LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg-~~Lasg~~dg~I~iWD~~~~~-----~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
..+++|.+.|++++|+|++ ++|++|+.||+|++||+.+.. ....+.+|...|.+++|+|++.+|++|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs------ 449 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGS------ 449 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEE------
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEe------
Confidence 4688999999999999875 799999999999999987643 3456789999999999999999999998
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeE
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i 156 (641)
.|++|++||+.+++.+..+.+|.+.|.+++|+|++.+|++|+.|++|++||.......
T Consensus 450 ----------------------~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~ 507 (694)
T 3dm0_A 450 ----------------------WDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKY 507 (694)
T ss_dssp ----------------------TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE
T ss_pred ----------------------CCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcce
Confidence 9999999999999999999999999999999999999999999999999998655433
Q ss_pred EEE---ccCCCCEEEEEEecCC--CEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCe
Q psy9327 157 CVL---TGHNHYVMCAQFHPTD--DIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKH 231 (641)
Q Consensus 157 ~~l---~~h~~~V~sl~fsp~g--~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~ 231 (641)
... .+|...|.+++|+|++ ..+++|+.|++|++||+++.+....+.+|...+.++... |-- ..+++++.|+
T Consensus 508 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~s-pdg---~~l~sg~~Dg 583 (694)
T 3dm0_A 508 TISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVS-PDG---SLCASGGKDG 583 (694)
T ss_dssp EECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC-TTS---SEEEEEETTS
T ss_pred eeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEe-CCC---CEEEEEeCCC
Confidence 322 4789999999999986 689999999999999999999999998888777765432 211 1267888999
Q ss_pred eEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe-cccc---------------------
Q psy9327 232 TLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR-TLDL--------------------- 288 (641)
Q Consensus 232 ~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~-~~d~--------------------- 288 (641)
.|++|| .+...+..+.....+.+++|+|++.++++++.++ +.+|+.+++.+. .+..
T Consensus 584 ~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (694)
T 3dm0_A 584 VVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHG-IKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKV 662 (694)
T ss_dssp BCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETTE-EEEEETTTTEEEEEECCCCC----------------CC
T ss_pred eEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCCC-EEEEECCCCCChhhhccccccccccccccccccCCcee
Confidence 999999 5667777777788999999999999988877655 899998877532 2211
Q ss_pred ---ceEEEEEcCcEEEEEeCCCCeEEEEeC
Q psy9327 289 ---PIYITKIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 289 ---p~~~~~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
....+..++..+++++.||.+++|++.
T Consensus 663 ~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 663 IYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp CCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 011245678999999999999999875
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-31 Score=276.66 Aligned_cols=245 Identities=21% Similarity=0.322 Sum_probs=211.2
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
++.+.+|..+|.+++|+|++++|++|+.||+|++||+.+++.+..+.+|.+.|.+++|+|+++++++|+
T Consensus 48 ~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs----------- 116 (304)
T 2ynn_A 48 VRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS----------- 116 (304)
T ss_dssp EEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE-----------
T ss_pred eEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEEC-----------
Confidence 467889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCC-eeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeeEEEE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~-~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~~~~~i~~l 159 (641)
.|++|++||++++ .....+.+|...|.+++|+| ++..|++|+.|++|++||++++.+...+
T Consensus 117 -----------------~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~ 179 (304)
T 2ynn_A 117 -----------------DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTL 179 (304)
T ss_dssp -----------------TTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEE
T ss_pred -----------------CCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcccee
Confidence 9999999999887 66678999999999999999 5789999999999999999887766555
Q ss_pred c-cCCCCEEEEEEec--CCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEe
Q psy9327 160 T-GHNHYVMCAQFHP--TDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236 (641)
Q Consensus 160 ~-~h~~~V~sl~fsp--~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~ 236 (641)
. +|...+..+.|+| ++.++++|+.|++|++||++++++...+.+|...+.++. ++|-.. .+++++.|+.|++|
T Consensus 180 ~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~-~~p~~~---~l~s~s~Dg~i~iW 255 (304)
T 2ynn_A 180 TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAV-FHPTLP---IIISGSEDGTLKIW 255 (304)
T ss_dssp ECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE-ECSSSS---EEEEEETTSCEEEE
T ss_pred ccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEE-ECCCCC---EEEEEcCCCeEEEE
Confidence 4 5678899999987 678999999999999999999999999998887776643 233221 27788999999999
Q ss_pred c-CCCcceeeecC-CcceEEEEEcCCcc--EEEEecCCeEEEEEcC
Q psy9327 237 N-RKMEPLCNIHE-NTRVKSGAWDESGV--FIYTTSNHIKYAIVNG 278 (641)
Q Consensus 237 d-~~~~~~~~~~~-~~~I~sla~~p~g~--~L~t~s~~~k~~l~~~ 278 (641)
| .+......+.. ...+.+++|+|++. ++++|+.++.+.+.-+
T Consensus 256 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~ 301 (304)
T 2ynn_A 256 NSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLG 301 (304)
T ss_dssp ETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEEECC
T ss_pred ECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEEEec
Confidence 9 45566666654 57899999999864 6888888876665543
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-31 Score=278.98 Aligned_cols=243 Identities=19% Similarity=0.338 Sum_probs=204.1
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+..|++|...|.+++|+|++.+|++|+.||+|++||+.+++.+..+.+|.++|.+++|+|++.++++|+
T Consensus 58 ~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s----------- 126 (319)
T 3frx_A 58 VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGS----------- 126 (319)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEE-----------
T ss_pred ceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEe-----------
Confidence 457899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCC------CEEEEEeCCCeEEEEECCCCee
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY------PWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~------~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
.|++|++||++ ++++.++.+|.+.|.+++|+|.. ..+++|+.|++|++||+++.++
T Consensus 127 -----------------~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 188 (319)
T 3frx_A 127 -----------------RDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI 188 (319)
T ss_dssp -----------------TTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEE
T ss_pred -----------------CCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchh
Confidence 99999999997 56788899999999999999954 4899999999999999999999
Q ss_pred EEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEE
Q psy9327 156 ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHI 235 (641)
Q Consensus 156 i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i 235 (641)
...+.+|...|.+++|+|++.+|++|+.||+|++||+.+++....+..+ ..+.++.. +|--. .++++ .+..+++
T Consensus 189 ~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~-sp~~~---~la~~-~~~~i~v 262 (319)
T 3frx_A 189 EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAF-SPNRY---WLAAA-TATGIKV 262 (319)
T ss_dssp EEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEE-CSSSS---EEEEE-ETTEEEE
T ss_pred heeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEE-cCCCC---EEEEE-cCCCcEE
Confidence 9999999999999999999999999999999999999999888777643 33444321 11100 02333 3455889
Q ss_pred ecCCCc-ceeee---------cCCcceEEEEEcCCccEEEEecCCeEEEEEcCC
Q psy9327 236 CNRKME-PLCNI---------HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 236 ~d~~~~-~~~~~---------~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~ 279 (641)
|+.... .+..+ .+...+.+++|+|+|.+|++++.|+.+.+|+..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 263 FSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp EEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 984322 22222 124578899999999999999998888888753
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-30 Score=271.02 Aligned_cols=276 Identities=11% Similarity=0.161 Sum_probs=229.2
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc-----ccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD-----EHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~-----~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
..+|.+.|++++|+|+++++++++ ||.|++||+.+++....+. .|..+|.+++|+|++.++++++
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------- 116 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG--------- 116 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE---------
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEc---------
Confidence 347999999999999999999999 9999999998876444433 6899999999999999999998
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCe--eEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK--CIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~--~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~ 157 (641)
.|+.|++||+.+++ ....+..|...|.+++|+|+++++++++.|+.|++||+++++.+.
T Consensus 117 -------------------~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~ 177 (337)
T 1gxr_A 117 -------------------EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR 177 (337)
T ss_dssp -------------------SSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred -------------------CCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceee
Confidence 99999999999887 677788899999999999999999999999999999999999999
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
.+.+|...|.+++|+|++..+++++.|+.|++||+++++...... +...+.++.. +|-- ..+++++.++.+.+||
T Consensus 178 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~-s~~~---~~l~~~~~~~~i~~~~ 252 (337)
T 1gxr_A 178 QFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGY-CPTG---EWLAVGMESSNVEVLH 252 (337)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEE-CTTS---SEEEEEETTSCEEEEE
T ss_pred eeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEE-CCCC---CEEEEEcCCCcEEEEE
Confidence 999999999999999999999999999999999999988776654 2333433221 1110 1156777899999999
Q ss_pred CCC-cceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe-cc--ccceEE--EEEcCcEEEEEeCCCCeEE
Q psy9327 238 RKM-EPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR-TL--DLPIYI--TKIKGNQVYYLDRECSPHV 311 (641)
Q Consensus 238 ~~~-~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~-~~--d~p~~~--~~~~g~~v~~~~~dg~i~v 311 (641)
... .......+...|.+++|+|++.++++++.++.+.+|+.+++... .. ..++.. +..++..+++++.||.+++
T Consensus 253 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 332 (337)
T 1gxr_A 253 VNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATV 332 (337)
T ss_dssp TTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred CCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeEEE
Confidence 443 33344445789999999999999999999999999998776543 21 222322 4456889999999999999
Q ss_pred EEe
Q psy9327 312 LRI 314 (641)
Q Consensus 312 ~~~ 314 (641)
|++
T Consensus 333 w~~ 335 (337)
T 1gxr_A 333 YEV 335 (337)
T ss_dssp EEE
T ss_pred EEE
Confidence 986
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-31 Score=279.44 Aligned_cols=239 Identities=19% Similarity=0.337 Sum_probs=191.4
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECcc-------CcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRM-------NTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~-------~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
|.+.|.+++|+|++++|++|+.||+|++||... .+.+..+.+|.++|.+++|+|++.+|++|+
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s---------- 126 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCS---------- 126 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEE----------
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEe----------
Confidence 999999999999999999999999999999853 345667889999999999999999999998
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCC----CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC--e
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQ----RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR--N 154 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t----~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~--~ 154 (641)
.|++|++||+.. .+++..+.+|.+.|.+++|+|++.+|++|+.|++|++||..++ +
T Consensus 127 ------------------~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~ 188 (330)
T 2hes_X 127 ------------------RDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWE 188 (330)
T ss_dssp ------------------TTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEE
T ss_pred ------------------CCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCee
Confidence 999999999943 3677889999999999999999999999999999999998776 6
Q ss_pred eEEEEccCCCCEEEEEEecC--CCEEEEEeCCCeEEEEecCCC--------ceeeeccC-CCceeeecccCCCceeeeee
Q psy9327 155 CICVLTGHNHYVMCAQFHPT--DDIVVSASLDQTIRVWDISGL--------RKKNVAPG-MGKLVLSMKSKHPIWKYCKP 223 (641)
Q Consensus 155 ~i~~l~~h~~~V~sl~fsp~--g~~lvSgs~DgtI~IWD~~~~--------~~~~~~~~-~~~~v~s~~~~~~v~~~~~~ 223 (641)
++..+.+|.+.|.+++|+|+ +..+++|+.|++|++||+++. .....+++ |...|.++..... ..
T Consensus 189 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~-----~~ 263 (330)
T 2hes_X 189 CVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFN-----GL 263 (330)
T ss_dssp EEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTT-----SC
T ss_pred EEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCC-----CE
Confidence 88999999999999999998 679999999999999999764 23344443 5555555443211 12
Q ss_pred eeeeCCCeeEEEecCCCc---ceeee--cCCc-ceEEEEEcC--CccEEEEecCCeEEEEEcCC
Q psy9327 224 VKYCNPKHTLHICNRKME---PLCNI--HENT-RVKSGAWDE--SGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 224 l~s~~~d~~I~i~d~~~~---~~~~~--~~~~-~I~sla~~p--~g~~L~t~s~~~k~~l~~~~ 279 (641)
+++++.|+.|++||.... ..... .+.. .|.+++|+| ++.+|++++.|+.+.+|+.+
T Consensus 264 l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 264 IASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred EEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 778889999999994332 22222 2344 899999999 68899999999999999754
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-31 Score=295.39 Aligned_cols=281 Identities=23% Similarity=0.374 Sum_probs=234.6
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
++|+||++.|++++|||||++||+|+.||+|+|||. +++++.++.+|.++|.+++|+|++++|++++
T Consensus 10 ~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~------------ 76 (577)
T 2ymu_A 10 NRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASAS------------ 76 (577)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEE------------
T ss_pred eEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEe------------
Confidence 468999999999999999999999999999999994 7888999999999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe--------
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN-------- 154 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~-------- 154 (641)
.|++|++||. +++++.++.+|.++|.+++|+|+++++++++.|+.+++|+.....
T Consensus 77 ----------------~d~~i~vWd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~ 139 (577)
T 2ymu_A 77 ----------------DDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHS 139 (577)
T ss_dssp ----------------TTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCS
T ss_pred ----------------CCCEEEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCC
Confidence 9999999995 578899999999999999999999999999999999999965431
Q ss_pred --------------------------------eEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 155 --------------------------------CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 155 --------------------------------~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
.......|...|.++.|+|++..+++++.|++|++||. +++....+.
T Consensus 140 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~ 218 (577)
T 2ymu_A 140 SSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT 218 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEE
T ss_pred CceeeeeeecCCccceecccccceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEe
Confidence 12234567888999999999999999999999999996 456667777
Q ss_pred CCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCC
Q psy9327 203 GMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG 281 (641)
Q Consensus 203 ~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g 281 (641)
++...+.++..... - ..+++++.++.+++||.+...+..+. +...|.+++|+|++..+++++.++.+.+|+.+..
T Consensus 219 ~~~~~v~~~~~s~d-g---~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~ 294 (577)
T 2ymu_A 219 GHSSSVRGVAFSPD-G---QTIASASDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQ 294 (577)
T ss_dssp CCSSCEEEEEECTT-S---SCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC
T ss_pred cCCCCEEEEEECCC-C---CEEEEEeCCCEEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc
Confidence 77766665432211 0 11667889999999998777666655 4778999999999999999999999999997766
Q ss_pred eEeccc---cceEE--EEEcCcEEEEEeCCCCeEEEEeCCcc
Q psy9327 282 IIRTLD---LPIYI--TKIKGNQVYYLDRECSPHVLRIDPTE 318 (641)
Q Consensus 282 ~I~~~d---~p~~~--~~~~g~~v~~~~~dg~i~v~~~~~~~ 318 (641)
.++.+. .++.. +..++..+++++.|+.+++|+.+...
T Consensus 295 ~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~ 336 (577)
T 2ymu_A 295 LLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQH 336 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCE
T ss_pred EEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe
Confidence 665542 22322 34568899999999999999977543
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-30 Score=270.59 Aligned_cols=282 Identities=16% Similarity=0.256 Sum_probs=235.9
Q ss_pred eeeccCCCCeEEEEEccC-CCeEEEEeCCCcEEEEECccCc-----ccccccccccCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 3 TKFETKSARVKGLSFHPK-RPWILSSLHNGVIQLWDYRMNT-----LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspd-g~~Lasg~~dg~I~iWD~~~~~-----~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
.+|+||.+.|++|+|+|+ +++|+||+.||+|+|||+.+++ ....+.+|..+|.+++|+|++.++++++
T Consensus 32 ~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~------ 105 (340)
T 4aow_A 32 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGS------ 105 (340)
T ss_dssp EEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEE------
T ss_pred EEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEc------
Confidence 579999999999999997 6799999999999999987653 4566788999999999999999999998
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee-
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC- 155 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~- 155 (641)
.|+.|++|+...+........+...+..+.+++++++|++|+.|+.+++||......
T Consensus 106 ----------------------~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~ 163 (340)
T 4aow_A 106 ----------------------WDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKY 163 (340)
T ss_dssp ----------------------TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE
T ss_pred ----------------------ccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceE
Confidence 999999999999999999999999999999999999999999999999999976654
Q ss_pred EEEEccCCCCEEEEEEecCC--CEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeE
Q psy9327 156 ICVLTGHNHYVMCAQFHPTD--DIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTL 233 (641)
Q Consensus 156 i~~l~~h~~~V~sl~fsp~g--~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I 233 (641)
...+.+|...+.+++|++++ ..+++++.|++|++||+++++....+.+|...|.++... |--. .+++++.|+.|
T Consensus 164 ~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s-~~~~---~l~s~s~Dg~i 239 (340)
T 4aow_A 164 TVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVS-PDGS---LCASGGKDGQA 239 (340)
T ss_dssp EECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC-TTSS---EEEEEETTCEE
T ss_pred EEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEEC-CCCC---EEEEEeCCCeE
Confidence 34457899999999999865 578999999999999999999999998888777765422 2111 26788899999
Q ss_pred EEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE-ecccc------------ceE--EEEEcC
Q psy9327 234 HICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII-RTLDL------------PIY--ITKIKG 297 (641)
Q Consensus 234 ~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I-~~~d~------------p~~--~~~~~g 297 (641)
++|| .....+..+.....+.+++|+|++.++ +++.++.+.+|+.+.+.. ..+.. ++. .+..++
T Consensus 240 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg 318 (340)
T 4aow_A 240 MLWDLNEGKHLYTLDGGDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADG 318 (340)
T ss_dssp EEEETTTTEEEEEEECSSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTS
T ss_pred EEEEeccCceeeeecCCceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCC
Confidence 9999 556777777788899999999998755 455688999998876643 22211 122 244578
Q ss_pred cEEEEEeCCCCeEEEEeCCc
Q psy9327 298 NQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 298 ~~v~~~~~dg~i~v~~~~~~ 317 (641)
..+++++.||.|++|++.++
T Consensus 319 ~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 319 QTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp SEEEEEETTSCEEEEEEEC-
T ss_pred CEEEEEeCCCEEEEEeCCCc
Confidence 89999999999999999875
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-31 Score=279.27 Aligned_cols=278 Identities=15% Similarity=0.223 Sum_probs=225.7
Q ss_pred eeccCCCCeEEEEEccC----CCeEEEEeCCCcEEEEECccCcccccccc-----cccCeEEEEEeCC----CCEEEEec
Q psy9327 4 KFETKSARVKGLSFHPK----RPWILSSLHNGVIQLWDYRMNTLLEKFDE-----HEGPVRGICFHNQ----QPIFVSGG 70 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspd----g~~Lasg~~dg~I~iWD~~~~~~l~~~~~-----h~~~V~~i~fsp~----~~~l~sgs 70 (641)
..++|.++|++++|+|+ ...+++++.++.|++||+.+++.+..+.. |.+.|.+++|+|+ +.++++|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 34589999999999984 45677777788999999998887777664 4578999999999 66899997
Q ss_pred eeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEE
Q psy9327 71 KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWY 149 (641)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd 149 (641)
.|+.|++||+.+++.+..+.+|.+.|.+++|+| ++.+|++|+.|+.|++||
T Consensus 93 ----------------------------~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd 144 (366)
T 3k26_A 93 ----------------------------SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWN 144 (366)
T ss_dssp ----------------------------TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred ----------------------------CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEE
Confidence 999999999999999999999999999999999 899999999999999999
Q ss_pred CCCCeeEEEE---ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC-----------------------
Q psy9327 150 WQSRNCICVL---TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----------------------- 203 (641)
Q Consensus 150 ~~~~~~i~~l---~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~----------------------- 203 (641)
+++++++..+ .+|...|.+++|+|++..+++++.||.|++||+++++....+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (366)
T 3k26_A 145 IQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDF 224 (366)
T ss_dssp TTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSE
T ss_pred eecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcc
Confidence 9999999998 78999999999999999999999999999999998765544332
Q ss_pred -----CCceeeecccCCCceeeeeeeeeeCCCeeEEEecC-CCcc--------------eeeec-CCcceEEEEEcCC--
Q psy9327 204 -----MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR-KMEP--------------LCNIH-ENTRVKSGAWDES-- 260 (641)
Q Consensus 204 -----~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~-~~~~--------------~~~~~-~~~~I~sla~~p~-- 260 (641)
+...+.++... ...+++++.++.|++||. .... +..+. +...|.+++|+|+
T Consensus 225 ~~~~~~~~~v~~~~~~------~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 298 (366)
T 3k26_A 225 STRDIHRNYVDCVRWL------GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFW 298 (366)
T ss_dssp EECSSCSSCCCEEEEE------TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTT
T ss_pred ccccCCcceEEEEEEc------CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCC
Confidence 33333332221 112678889999999993 3222 23332 3567899999999
Q ss_pred ccEEEEecCCeEEEEEcCCCCe-----Eeccc-----cceEE--EEEcCcEEEEEeCCCCeEEEEeC
Q psy9327 261 GVFIYTTSNHIKYAIVNGDHGI-----IRTLD-----LPIYI--TKIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 261 g~~L~t~s~~~k~~l~~~~~g~-----I~~~d-----~p~~~--~~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
|.+|++++.++.+.+|+.+.+. +..+. .++.. +..++..+++++.||.+++|++.
T Consensus 299 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 299 QKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp SSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 9999999999999999987752 22232 33332 44578899999999999999875
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-31 Score=272.30 Aligned_cols=247 Identities=21% Similarity=0.322 Sum_probs=212.8
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+..+.+|...|.+++|+|++++|++|+.||.|++||+++++.+..+..|...|.+++|+|++.++++|+
T Consensus 58 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~----------- 126 (312)
T 4ery_A 58 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS----------- 126 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE-----------
T ss_pred chhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe-----------
Confidence 356789999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc-
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT- 160 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~- 160 (641)
.|+.|++||+++++.+..+..|.++|.+++|+|++.++++|+.|+.|++||+++++++..+.
T Consensus 127 -----------------~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 189 (312)
T 4ery_A 127 -----------------FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 189 (312)
T ss_dssp -----------------TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred -----------------CCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEec
Confidence 99999999999999999999999999999999999999999999999999999998887764
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecc--cCCCceeeeeeeeeeCCCeeEEEec-
Q psy9327 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMK--SKHPIWKYCKPVKYCNPKHTLHICN- 237 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~--~~~~v~~~~~~l~s~~~d~~I~i~d- 237 (641)
.|...+.+++|+|++.++++++.|+.|++||+++++....+.++.....++. ...+ -...+++++.|+.|++||
T Consensus 190 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~sg~~dg~i~vwd~ 266 (312)
T 4ery_A 190 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT---GGKWIVSGSEDNLVYIWNL 266 (312)
T ss_dssp SSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECS---SSCEEEECCTTSCEEEEET
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeC---CCcEEEEECCCCEEEEEEC
Confidence 5667899999999999999999999999999999988888776543322111 0000 011267888999999999
Q ss_pred CCCcceeeec-CCcceEEEEEcCCccEEEEec--CCeEEEEEcCC
Q psy9327 238 RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTS--NHIKYAIVNGD 279 (641)
Q Consensus 238 ~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s--~~~k~~l~~~~ 279 (641)
.....+..+. +...|.+++|+|++..+++++ .|+.+.+|..+
T Consensus 267 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 267 QTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp TTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 4455555554 477899999999999999886 57778888653
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-31 Score=278.45 Aligned_cols=242 Identities=19% Similarity=0.354 Sum_probs=197.3
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
..+.+|...|.+++|+|++.++++|+.||+|++||+++++.+..+.+|.++|.+++|+|++.+|++++
T Consensus 70 ~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~------------ 137 (343)
T 2xzm_R 70 KALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAG------------ 137 (343)
T ss_dssp EEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEE------------
T ss_pred chhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEc------------
Confidence 46889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc---cCCCCeEEEEEccCC----------CEEEEEeCCCeEEEEE
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL---GHLDYIRTTFFHHEY----------PWILSASDDQTIRIWY 149 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~---~h~~~V~~v~fsp~~----------~~l~sgs~Dg~I~vWd 149 (641)
.|++|++||+... ...... +|.+.|.+++|+|++ ++|++++.|++|++||
T Consensus 138 ----------------~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd 200 (343)
T 2xzm_R 138 ----------------AEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN 200 (343)
T ss_dssp ----------------TTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE
T ss_pred ----------------CCCEEEEEeccCC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc
Confidence 9999999999844 333333 789999999999987 7999999999999999
Q ss_pred CCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCc-eeeeccCCCceeeecccCCCceeeeeeeeeeC
Q psy9327 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCN 228 (641)
Q Consensus 150 ~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~-~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~ 228 (641)
...+....+.+|...|.+++|+|+|.+|++|+.|++|++||+.+.. ....+. ++..+.++.. +|- ..+.+++
T Consensus 201 -~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~-sp~----~~~la~~ 273 (343)
T 2xzm_R 201 -TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAF-NPK----LQWVAVG 273 (343)
T ss_dssp -TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEE-CSS----SCEEEEE
T ss_pred -CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEE-CCC----CCEEEEE
Confidence 5567788899999999999999999999999999999999995433 333322 2333444322 221 1234455
Q ss_pred CCeeEEEecCC-Ccce--eee------------cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCC
Q psy9327 229 PKHTLHICNRK-MEPL--CNI------------HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 229 ~d~~I~i~d~~-~~~~--~~~------------~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~ 280 (641)
.++.+++||.. .... ..+ .+...+.+++|+|+|.+|++|+.|+.+.+|+.++
T Consensus 274 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 274 TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 78889999933 2221 122 2356799999999999999999999888887543
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-32 Score=288.52 Aligned_cols=241 Identities=13% Similarity=0.160 Sum_probs=191.6
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC--cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN--TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~--~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.++.|.++|++++|+|++++|++|+.||.|++||+.++ +.+..+.+|.++|.+++|+|++.+|++++
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s----------- 74 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCS----------- 74 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEE-----------
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEe-----------
Confidence 35567889999999999999999999999999999988 78889999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCe---eEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe---e
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRK---CIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN---C 155 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~---~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~---~ 155 (641)
.|++|++||+.+++ ....+.+|.+.|.+++|+|++.+|++|+.|+.|++||+++++ +
T Consensus 75 -----------------~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 137 (377)
T 3dwl_C 75 -----------------QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWV 137 (377)
T ss_dssp -----------------TTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCC
T ss_pred -----------------CCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccccee
Confidence 99999999999887 778888999999999999999999999999999999999887 4
Q ss_pred EEEEcc-CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCC------------------ceeeeccCCCceeeecccCCC
Q psy9327 156 ICVLTG-HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL------------------RKKNVAPGMGKLVLSMKSKHP 216 (641)
Q Consensus 156 i~~l~~-h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~------------------~~~~~~~~~~~~v~s~~~~~~ 216 (641)
...+.+ |...|++++|+|++.+|++++.|++|++||++.. +....+ +|...+.++... |
T Consensus 138 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s-p 215 (377)
T 3dwl_C 138 SKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFS-P 215 (377)
T ss_dssp CEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEEC-T
T ss_pred eeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEEC-C
Confidence 778887 9999999999999999999999999999999632 233333 444444443211 1
Q ss_pred ceeeeeeeeeeCCCeeEEEec-CCCcc----eeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 217 IWKYCKPVKYCNPKHTLHICN-RKMEP----LCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 217 v~~~~~~l~s~~~d~~I~i~d-~~~~~----~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
-- ..+++++.|+.|++|| ..... +..+. +...|.+++|+|+|.++++++.++.+..+.
T Consensus 216 ~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~ 279 (377)
T 3dwl_C 216 SG---NALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQG 279 (377)
T ss_dssp TS---SCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECC
T ss_pred CC---CEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEe
Confidence 00 0177888999999999 44443 33333 467899999999999999998777774443
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-31 Score=277.78 Aligned_cols=243 Identities=14% Similarity=0.145 Sum_probs=206.6
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC------cccccccccccCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN------TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~------~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
..+..|...|.+++|+|+|.++++|+.|+.+++|++... .....+..|.+.|.+++|+|++..+++++
T Consensus 100 ~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s------ 173 (354)
T 2pbi_B 100 HAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTAS------ 173 (354)
T ss_dssp EEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEE------
T ss_pred eEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEe------
Confidence 456778899999999999999999999999999998643 23455678999999999999999999998
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc--CCCEEEEEeCCCeEEEEECCCCe
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRIWYWQSRN 154 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp--~~~~l~sgs~Dg~I~vWd~~~~~ 154 (641)
.|++|++||+++++++.++.+|...|.+++|+| ++.+|++|+.|++|++||+++++
T Consensus 174 ----------------------~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~ 231 (354)
T 2pbi_B 174 ----------------------GDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ 231 (354)
T ss_dssp ----------------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC
T ss_pred ----------------------CCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 999999999999999999999999999999988 46899999999999999999999
Q ss_pred eEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCC--ceeeecccCCCceeeeeeeeeeCCCee
Q psy9327 155 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG--KLVLSMKSKHPIWKYCKPVKYCNPKHT 232 (641)
Q Consensus 155 ~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~--~~v~s~~~~~~v~~~~~~l~s~~~d~~ 232 (641)
++..+.+|...|.+++|+|++..+++|+.|++|++||+++.+....+..+. ..+.++. ++|-- ..+++++.|+.
T Consensus 232 ~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~-~s~~g---~~l~~g~~d~~ 307 (354)
T 2pbi_B 232 CVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVD-FSLSG---RLLFAGYNDYT 307 (354)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEE-ECTTS---SEEEEEETTSC
T ss_pred EEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEE-EeCCC---CEEEEEECCCc
Confidence 999999999999999999999999999999999999999887766554322 1222211 11100 11677889999
Q ss_pred EEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 233 LHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 233 I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
|++|| .++..+..+. +...|.+++|+|+|.+|++++.|+.+.+|+
T Consensus 308 i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 308 INVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99999 4555555553 578999999999999999999999999884
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-31 Score=278.52 Aligned_cols=282 Identities=13% Similarity=0.127 Sum_probs=229.9
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc--ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT--LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~--~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.+..|.++|++++|+|++++|++|+.||.|++||+.+++ .+..+..|..+|.+++|+|++.++++++
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----------- 71 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG----------- 71 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEE-----------
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEc-----------
Confidence 456799999999999999999999999999999999887 8888999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEE--EccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee----
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT--LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC---- 155 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~--~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~---- 155 (641)
.|+.|++||+++++.... +..|...|.+++|+|+++++++|+.|+.|++||++.+..
T Consensus 72 -----------------~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~ 134 (372)
T 1k8k_C 72 -----------------TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVC 134 (372)
T ss_dssp -----------------TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEE
T ss_pred -----------------CCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceee
Confidence 999999999999876544 467999999999999999999999999999999988762
Q ss_pred EEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecC------------------CCceeeeccCCCceeeecccCCCc
Q psy9327 156 ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS------------------GLRKKNVAPGMGKLVLSMKSKHPI 217 (641)
Q Consensus 156 i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~------------------~~~~~~~~~~~~~~v~s~~~~~~v 217 (641)
.....+|...|.+++|+|++.++++++.||.|++||++ .++....+.++...+.++... |-
T Consensus 135 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~ 213 (372)
T 1k8k_C 135 KHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS-AN 213 (372)
T ss_dssp EEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC-SS
T ss_pred eeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEEC-CC
Confidence 33336789999999999999999999999999999964 556666666666666554322 11
Q ss_pred eeeeeeeeeeCCCeeEEEec-CCCcceeeecC-CcceEEEEEcCCccEEEEecCCeEEEEEcCCC--CeE----------
Q psy9327 218 WKYCKPVKYCNPKHTLHICN-RKMEPLCNIHE-NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH--GII---------- 283 (641)
Q Consensus 218 ~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~-~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~--g~I---------- 283 (641)
- ..+++++.++.|++|| .....+..+.. ..+|.+++|+|++.+++++ .++.+.+|+..+ +..
T Consensus 214 ~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~ 289 (372)
T 1k8k_C 214 G---SRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPK 289 (372)
T ss_dssp S---SEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC-
T ss_pred C---CEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccc
Confidence 0 1267788999999999 45666666654 5689999999999999888 888999998766 421
Q ss_pred -----------------------------e----ccccceEEE--E-EcC---cEEEEEeCCCCeEEEEeCCcc
Q psy9327 284 -----------------------------R----TLDLPIYIT--K-IKG---NQVYYLDRECSPHVLRIDPTE 318 (641)
Q Consensus 284 -----------------------------~----~~d~p~~~~--~-~~g---~~v~~~~~dg~i~v~~~~~~~ 318 (641)
. .-..++... . .++ ..+++++.||.+++|++++.+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 290 QSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp -------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred cchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 1 112233332 3 344 899999999999999988644
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-31 Score=281.76 Aligned_cols=243 Identities=16% Similarity=0.198 Sum_probs=201.0
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccc----ccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK----FDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~----~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
...+|.+.|.+++|+|++. +++++.||+|+|||+.+++.... ..+|.++|.+++|+|++.+|++|+
T Consensus 89 ~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs--------- 158 (357)
T 4g56_B 89 AGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG--------- 158 (357)
T ss_dssp EEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEE---------
T ss_pred ccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEe---------
Confidence 3457899999999999986 55678899999999988765433 237999999999999999999998
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeeEEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
.|++|++||+++++++..+.+|.+.|++++|+|++. .+++++.|++|++||++++++...
T Consensus 159 -------------------~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~ 219 (357)
T 4g56_B 159 -------------------KDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATR 219 (357)
T ss_dssp -------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCB
T ss_pred -------------------CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeee
Confidence 999999999999999999999999999999999875 789999999999999999887655
Q ss_pred E--ccCCCCEEEEEEecC-CCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEE
Q psy9327 159 L--TGHNHYVMCAQFHPT-DDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHI 235 (641)
Q Consensus 159 l--~~h~~~V~sl~fsp~-g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i 235 (641)
+ ..|...+++++|+|+ +.++++|+.|+.|++||+++++....+.++...|.++.....-- .-+++++.|++|++
T Consensus 220 ~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~---~~lasgs~D~~i~i 296 (357)
T 4g56_B 220 IDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSS---PFLASISEDCTVAV 296 (357)
T ss_dssp CCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSS---CCEEEEETTSCEEE
T ss_pred eeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCC---CEEEEEeCCCEEEE
Confidence 4 457788999999997 56899999999999999999999999988888777654321100 01678889999999
Q ss_pred ec-CCCcceeeecCCcceEEEEEcC-CccEEEEecCCeEEEEEcC
Q psy9327 236 CN-RKMEPLCNIHENTRVKSGAWDE-SGVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 236 ~d-~~~~~~~~~~~~~~I~sla~~p-~g~~L~t~s~~~k~~l~~~ 278 (641)
|| ...+.+....+...|.+++|+| ++.+|++++.|+.+.+|+.
T Consensus 297 wd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 297 LDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp ECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred EECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEEC
Confidence 99 4456666677789999999998 7999999999888888875
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-31 Score=277.84 Aligned_cols=249 Identities=16% Similarity=0.325 Sum_probs=198.8
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC--cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN--TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~--~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
.++|.+.|.+++|+|++++|++|+.||+|++||...+ +.+..+.+|.++|.+++|+|++.+|++|+
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s------------ 124 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCS------------ 124 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEE------------
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEE------------
Confidence 3689999999999999999999999999999998776 45678889999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCC---eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe--eEE
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQR---KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN--CIC 157 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~---~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~--~i~ 157 (641)
.|++|++||+.++ .++..+.+|.+.|.+++|+|++.+|++|+.|++|++||.++++ +..
T Consensus 125 ----------------~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~ 188 (345)
T 3fm0_A 125 ----------------RDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCA 188 (345)
T ss_dssp ----------------TTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEE
T ss_pred ----------------CCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEE
Confidence 9999999999876 4567888999999999999999999999999999999998875 567
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC--C---ceeeecc--cCCCceeeeee-----ee
Q psy9327 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM--G---KLVLSMK--SKHPIWKYCKP-----VK 225 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~--~---~~v~s~~--~~~~v~~~~~~-----l~ 225 (641)
++.+|...|.+++|+|++.+|++|+.|++|++||............. . ..+..+. ....++.+.+. ++
T Consensus 189 ~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~ 268 (345)
T 3fm0_A 189 TLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALA 268 (345)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEE
T ss_pred EecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEE
Confidence 89999999999999999999999999999999997432211111000 0 0011111 11223333332 77
Q ss_pred eeCCCeeEEEecCCCc-----ce----ee--ecCCcceEEEEEcCCc-cEEEEecCCeEEEEEcCCCC
Q psy9327 226 YCNPKHTLHICNRKME-----PL----CN--IHENTRVKSGAWDESG-VFIYTTSNHIKYAIVNGDHG 281 (641)
Q Consensus 226 s~~~d~~I~i~d~~~~-----~~----~~--~~~~~~I~sla~~p~g-~~L~t~s~~~k~~l~~~~~g 281 (641)
+++.|+.+++|+.... +. .. ..+...|.+++|+|++ .+|++++.|+.+.+|+...+
T Consensus 269 s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 269 TACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp EEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-
T ss_pred EEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCC
Confidence 8889999999983321 11 11 1356789999999997 59999999999999986554
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-30 Score=291.54 Aligned_cols=276 Identities=24% Similarity=0.379 Sum_probs=236.1
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+..+.+|.+.|.+++|+|+++++++++.||+|++||... ..+..+..|..+|.+++|+|++.++++++
T Consensus 296 ~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~----------- 363 (577)
T 2ymu_A 296 LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASAS----------- 363 (577)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEE-----------
T ss_pred EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEe-----------
Confidence 456789999999999999999999999999999999764 45677889999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~ 161 (641)
.|+.|++||. +++.+.++.+|...|++++|+|++++|++++.|+.|++||. +++.+..+.+
T Consensus 364 -----------------~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~ 424 (577)
T 2ymu_A 364 -----------------DDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG 424 (577)
T ss_dssp -----------------TTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEEC
T ss_pred -----------------CCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecC
Confidence 9999999995 57888999999999999999999999999999999999995 6778889999
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCc
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKME 241 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~ 241 (641)
|...|++++|+|++.+|++++.|++|++||.. ++....+.+|...+.++... |--. .+++++.|+.|++||.++.
T Consensus 425 ~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~~~~~~v~~~~~s-pd~~---~las~~~d~~i~iw~~~~~ 499 (577)
T 2ymu_A 425 HSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFS-PDGQ---TIASASDDKTVKLWNRNGQ 499 (577)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETT-SCEEEEEECCSSCEEEEEEC-TTSC---EEEEEETTSEEEEEETTSC
T ss_pred CCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-CCEEEEEcCCCCCEEEEEEc-CCCC---EEEEEeCCCEEEEEcCCCC
Confidence 99999999999999999999999999999964 56667777777776654422 2111 2678889999999998777
Q ss_pred ceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEeccc---cceEE--EEEcCcEEEEEeCCCCeEEEE
Q psy9327 242 PLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLD---LPIYI--TKIKGNQVYYLDRECSPHVLR 313 (641)
Q Consensus 242 ~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d---~p~~~--~~~~g~~v~~~~~dg~i~v~~ 313 (641)
.+..+. +...|.+++|+|+|.+|++++.|+.+.+|+.....+..+. .++.. +..++..+++++.|+.+++|+
T Consensus 500 ~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 500 LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 776665 4789999999999999999999999999997655555542 23332 446788999999999999995
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.98 E-value=8.8e-32 Score=280.09 Aligned_cols=247 Identities=13% Similarity=0.174 Sum_probs=199.5
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc--ccccccccccCeEEEEEeC--CCCEEEEeceeeEEeeec
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT--LLEKFDEHEGPVRGICFHN--QQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~--~l~~~~~h~~~V~~i~fsp--~~~~l~sgs~~~~~~~~~ 79 (641)
.+.+|.+.|++++|+|+|++|++|+.||+|++||+.+++ .+..+.+|.++|.+++|+| ++.+|++|+
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s--------- 78 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCS--------- 78 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEE---------
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEE---------
Confidence 457999999999999999999999999999999998764 4677889999999999975 488999998
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCC--eeEEEEccCCCCeEEEEEccC--CCEEEEEeCCCeEEEEECCCCee
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQR--KCIFTLLGHLDYIRTTFFHHE--YPWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~--~~~~~~~~h~~~V~~v~fsp~--~~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
.|++|++||++++ +....+.+|.+.|.+++|+|+ +.+|++|+.|++|++||++.+..
T Consensus 79 -------------------~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~ 139 (316)
T 3bg1_A 79 -------------------YDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ 139 (316)
T ss_dssp -------------------TTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSC
T ss_pred -------------------CCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCC
Confidence 9999999999987 467788999999999999998 78999999999999999987632
Q ss_pred ---EEEEccCCCCEEEEEEecC-----------------CCEEEEEeCCCeEEEEecCCC---ceeeeccCCCceeeecc
Q psy9327 156 ---ICVLTGHNHYVMCAQFHPT-----------------DDIVVSASLDQTIRVWDISGL---RKKNVAPGMGKLVLSMK 212 (641)
Q Consensus 156 ---i~~l~~h~~~V~sl~fsp~-----------------g~~lvSgs~DgtI~IWD~~~~---~~~~~~~~~~~~v~s~~ 212 (641)
...+.+|...|.+++|+|+ +.+|++|+.|++|++||++.. +....+.+|...|.++.
T Consensus 140 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~ 219 (316)
T 3bg1_A 140 WEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVA 219 (316)
T ss_dssp EEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEE
T ss_pred cceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEE
Confidence 3456789999999999997 468999999999999999754 45667778888887754
Q ss_pred cCCCceee-eeeeeeeCCCeeEEEecCCC----c-cee-eecCCcceEEEEEcCCccEEEEecCCeEEEEEcCC
Q psy9327 213 SKHPIWKY-CKPVKYCNPKHTLHICNRKM----E-PLC-NIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 213 ~~~~v~~~-~~~l~s~~~d~~I~i~d~~~----~-~~~-~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~ 279 (641)
. +|.... ...+++++.|++|++|+... . ... ...+...|.+++|+|+|.+|++++.|+.+.+|+..
T Consensus 220 ~-sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 220 W-APSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp C-CCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred e-cCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 3 222100 11277899999999998432 1 111 12346789999999999999999999999999743
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-30 Score=278.44 Aligned_cols=281 Identities=12% Similarity=0.110 Sum_probs=233.0
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc------ccccccccccCeEEEEEeCC----C---CEEEE
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT------LLEKFDEHEGPVRGICFHNQ----Q---PIFVS 68 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~------~l~~~~~h~~~V~~i~fsp~----~---~~l~s 68 (641)
...+++|.+.|++++|+| ++|++|+.||+|++||+.+++ .+..+..|..+|.+++|+|+ + .+|++
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 86 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEE
Confidence 356789999999999999 799999999999999999887 67888899999999999999 9 99999
Q ss_pred eceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee-----EEEEccC-----CCCeEEEEEc----cCCC
Q psy9327 69 GGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC-----IFTLLGH-----LDYIRTTFFH----HEYP 134 (641)
Q Consensus 69 gs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~-----~~~~~~h-----~~~V~~v~fs----p~~~ 134 (641)
++ .|+.|++||+.+++. +..+..| .+.|.+++|+ |+++
T Consensus 87 ~~----------------------------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 138 (397)
T 1sq9_A 87 TS----------------------------FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLS 138 (397)
T ss_dssp EE----------------------------TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----C
T ss_pred Ec----------------------------CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCc
Confidence 98 999999999998887 8889989 5999999999 9999
Q ss_pred E-EEEEeCCCeEEEEECCC------CeeEE-----EE-------ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCC
Q psy9327 135 W-ILSASDDQTIRIWYWQS------RNCIC-----VL-------TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195 (641)
Q Consensus 135 ~-l~sgs~Dg~I~vWd~~~------~~~i~-----~l-------~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~ 195 (641)
+ |++|+.|+.|++||+++ ++++. .+ ..|...|.+++|+|++ .+++++.|+.|++||++++
T Consensus 139 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~ 217 (397)
T 1sq9_A 139 HRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTL 217 (397)
T ss_dssp EEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTT
T ss_pred eEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCC
Confidence 9 99999999999999998 66655 67 4589999999999999 9999999999999999999
Q ss_pred ceeeeccC---C---CceeeecccCCCceeeeeeeeeeCCC---eeEEEec-CCCcceeeec--------------CCcc
Q psy9327 196 RKKNVAPG---M---GKLVLSMKSKHPIWKYCKPVKYCNPK---HTLHICN-RKMEPLCNIH--------------ENTR 251 (641)
Q Consensus 196 ~~~~~~~~---~---~~~v~s~~~~~~v~~~~~~l~s~~~d---~~I~i~d-~~~~~~~~~~--------------~~~~ 251 (641)
+....+.. | ...+.++... |-- ..+++++.+ +.|++|| .....+..+. +...
T Consensus 218 ~~~~~~~~~~~h~~~~~~i~~i~~~-~~~---~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (397)
T 1sq9_A 218 RPLYNFESQHSMINNSNSIRSVKFS-PQG---SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW 293 (397)
T ss_dssp EEEEEEECCC---CCCCCEEEEEEC-SST---TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC
T ss_pred ceeEEEeccccccccCCccceEEEC-CCC---CEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCc
Confidence 88888877 6 6666654432 111 115667778 9999999 4556565554 5788
Q ss_pred eEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eeccc------------------------cceEE--EEEcC-------
Q psy9327 252 VKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLD------------------------LPIYI--TKIKG------- 297 (641)
Q Consensus 252 I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d------------------------~p~~~--~~~~g------- 297 (641)
|.+++|+|++.+|++++.++.+.+|+..++. +..+. .++.. +..++
T Consensus 294 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~ 373 (397)
T 1sq9_A 294 VMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGA 373 (397)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTC
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccc
Confidence 9999999999999999999999999987764 33333 33333 44455
Q ss_pred ---cEEEEEeCCCCeEEEEeCCc
Q psy9327 298 ---NQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 298 ---~~v~~~~~dg~i~v~~~~~~ 317 (641)
..+++++.||.+++|+++++
T Consensus 374 ~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 374 DLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp TTSCEEEEEETTTEEEEEEEEC-
T ss_pred cccceEEEecCCCcEEEEEcCCC
Confidence 68999999999999999865
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-30 Score=282.11 Aligned_cols=251 Identities=12% Similarity=0.148 Sum_probs=202.5
Q ss_pred ceee-ccCCCCeEEEEEcc-CCCeEEEEeCCCcEEEEECcc---Ccccc-ccc-ccccCeEEEEEeCCCCEEEEeceeeE
Q psy9327 2 LTKF-ETKSARVKGLSFHP-KRPWILSSLHNGVIQLWDYRM---NTLLE-KFD-EHEGPVRGICFHNQQPIFVSGGKMIV 74 (641)
Q Consensus 2 l~~~-~~H~~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~---~~~l~-~~~-~h~~~V~~i~fsp~~~~l~sgs~~~~ 74 (641)
+.++ ++|.+.|++++|+| ++++|++|+.||+|++||+.+ +.... ... .|.++|.+++|+|++.+|++|+
T Consensus 55 ~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s---- 130 (437)
T 3gre_A 55 IATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSS---- 130 (437)
T ss_dssp EEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEE----
T ss_pred EeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEe----
Confidence 4677 89999999999999 999999999999999999977 43221 222 5899999999999999999998
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEECC---CCeeEEEEcc------------CCCCeEEEE--EccCCCEEE
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK---QRKCIFTLLG------------HLDYIRTTF--FHHEYPWIL 137 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~---t~~~~~~~~~------------h~~~V~~v~--fsp~~~~l~ 137 (641)
.|++|++||+. +++....+.+ +.+.+.++. +++++.+++
T Consensus 131 ------------------------~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 186 (437)
T 3gre_A 131 ------------------------KDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLV 186 (437)
T ss_dssp ------------------------TTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEE
T ss_pred ------------------------CCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEE
Confidence 99999999994 5554443332 455666766 557899999
Q ss_pred EEeCCCeEEEEECCCCeeEEEEcc--CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc-CCCceeeecccC
Q psy9327 138 SASDDQTIRIWYWQSRNCICVLTG--HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP-GMGKLVLSMKSK 214 (641)
Q Consensus 138 sgs~Dg~I~vWd~~~~~~i~~l~~--h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~-~~~~~v~s~~~~ 214 (641)
+|+.|+.|++||+++++++..+.+ |.+.|++++|+|++.+|++|+.||+|++||+++++....+. ++...+.++. .
T Consensus 187 ~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~-~ 265 (437)
T 3gre_A 187 ALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVE-V 265 (437)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEE-E
T ss_pred EEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEE-e
Confidence 999999999999999999999988 89999999999999999999999999999999998888765 5555666542 1
Q ss_pred CCceee-eeeeeeeCCCeeEEEecC-CCcceeeec---------------------------CCcceEEEEEcCCccEEE
Q psy9327 215 HPIWKY-CKPVKYCNPKHTLHICNR-KMEPLCNIH---------------------------ENTRVKSGAWDESGVFIY 265 (641)
Q Consensus 215 ~~v~~~-~~~l~s~~~d~~I~i~d~-~~~~~~~~~---------------------------~~~~I~sla~~p~g~~L~ 265 (641)
+|.+.. ...+++++.|+.|++||. .+..+..+. +...|.+++|+ ++.+|+
T Consensus 266 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~ 344 (437)
T 3gre_A 266 CQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILL 344 (437)
T ss_dssp CTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEE
T ss_pred ccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEE
Confidence 222211 113778899999999994 344433332 34568899999 779999
Q ss_pred EecCCeEEEEEcCCCCe
Q psy9327 266 TTSNHIKYAIVNGDHGI 282 (641)
Q Consensus 266 t~s~~~k~~l~~~~~g~ 282 (641)
+++.|+.+.+|+..++.
T Consensus 345 s~~~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 345 TDEATSSIVMFSLNELS 361 (437)
T ss_dssp EEGGGTEEEEEETTCGG
T ss_pred ecCCCCeEEEEECCCcc
Confidence 99999999999976653
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.98 E-value=3.8e-30 Score=276.08 Aligned_cols=235 Identities=20% Similarity=0.344 Sum_probs=197.3
Q ss_pred CeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
.|.+++|+|+|++|++|+.||+|++||+.+++.+..+.+|...|.+++|+|++.+|++++
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s-------------------- 184 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGS-------------------- 184 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE--------------------
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEec--------------------
Confidence 599999999999999999999999999999999999999999999999999999999998
Q ss_pred eeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeeEEEE-------ccC
Q psy9327 91 FRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQSRNCICVL-------TGH 162 (641)
Q Consensus 91 ~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~~~~~i~~l-------~~h 162 (641)
.|++|++||++++++...+. +.+.+.+++|+| ++.+|++|+.|++|++||.++++++..+ .+|
T Consensus 185 --------~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h 255 (393)
T 1erj_A 185 --------GDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGH 255 (393)
T ss_dssp --------TTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCC
T ss_pred --------CCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCC
Confidence 99999999999999888876 667899999999 8999999999999999999999888777 689
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce------------eeeccCCCceeeecccCCCceeeeeeeeeeCCC
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK------------KNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPK 230 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~------------~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d 230 (641)
.+.|.+++|+|++.+|++|+.|++|++||+++... ...+.+|...+.++... |- ...+++++.|
T Consensus 256 ~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~---~~~l~sgs~D 331 (393)
T 1erj_A 256 KDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATT-QN---DEYILSGSKD 331 (393)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEEC-GG---GCEEEEEETT
T ss_pred CCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEEC-CC---CCEEEEEeCC
Confidence 99999999999999999999999999999986432 23344454444443211 10 0126788899
Q ss_pred eeEEEec-CCCcceeeec-CCcceEEEEEcC------CccEEEEecCCeEEEEEcC
Q psy9327 231 HTLHICN-RKMEPLCNIH-ENTRVKSGAWDE------SGVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 231 ~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p------~g~~L~t~s~~~k~~l~~~ 278 (641)
+.|++|| ..+..+..+. +...|.+++|++ ++.++++++.|+.+.+|+.
T Consensus 332 ~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 332 RGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred CeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcc
Confidence 9999999 4555555554 577899999876 6889999999988888864
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.98 E-value=9.9e-30 Score=261.01 Aligned_cols=281 Identities=16% Similarity=0.248 Sum_probs=229.9
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
++.|.+|.+.|++++| |++++|++|+.||.|++||+.+++....+..|.++|.+++|+|++.++++++
T Consensus 11 ~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------- 78 (313)
T 3odt_A 11 SATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGG----------- 78 (313)
T ss_dssp EEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEE-----------
T ss_pred HHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEec-----------
Confidence 5689999999999999 9999999999999999999999988888999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCC---eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQR---KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~---~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
.|+.|++||+... +.+..+.+|.+.|.+++| ++.++++++.|+.|++|| .++....
T Consensus 79 -----------------~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~ 137 (313)
T 3odt_A 79 -----------------KDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYN 137 (313)
T ss_dssp -----------------TTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEE
T ss_pred -----------------CCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEe
Confidence 9999999998654 667888999999999999 567999999999999999 7788889
Q ss_pred EccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEecCCCceeeeccC-CCceeeecccCCCceeeeeeeeeeCCCeeEEEe
Q psy9327 159 LTGHNHYVMCAQFHP-TDDIVVSASLDQTIRVWDISGLRKKNVAPG-MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236 (641)
Q Consensus 159 l~~h~~~V~sl~fsp-~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~-~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~ 236 (641)
+.+|...+.++.|+| ++..+++++.|+.|++|| ..+....+.. +...+.++... ....+++++.++.+++|
T Consensus 138 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~dg~i~i~ 210 (313)
T 3odt_A 138 LQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVV-----DDGHFISCSNDGLIKLV 210 (313)
T ss_dssp EECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEE-----ETTEEEEEETTSEEEEE
T ss_pred cccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEc-----CCCeEEEccCCCeEEEE
Confidence 999999999999999 899999999999999999 3444444444 44555443321 11126788899999999
Q ss_pred c-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecccc---ceEE--EEEcCcEEEEEeCCCC
Q psy9327 237 N-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDL---PIYI--TKIKGNQVYYLDRECS 308 (641)
Q Consensus 237 d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~---p~~~--~~~~g~~v~~~~~dg~ 308 (641)
| .....+..+. +...|.+++|+|++ .+++++.++.+.+|+..++. +..+.. ++.. +..++. +++++.||.
T Consensus 211 d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~ 288 (313)
T 3odt_A 211 DMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNL 288 (313)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSC
T ss_pred ECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCc
Confidence 9 4466666665 57899999999999 58899999999999987764 333322 3333 233444 778999999
Q ss_pred eEEEEeCCcchhhhHH
Q psy9327 309 PHVLRIDPTEFKFKLA 324 (641)
Q Consensus 309 i~v~~~~~~~~~~k~~ 324 (641)
+++|++++.+......
T Consensus 289 i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 289 VRIFSQEKSRWASEDE 304 (313)
T ss_dssp EEEEESCGGGCCC---
T ss_pred EEEEeCCCCceeehhh
Confidence 9999999876655443
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.6e-30 Score=279.55 Aligned_cols=277 Identities=17% Similarity=0.077 Sum_probs=228.0
Q ss_pred CeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
.+++++|+|++++|++|+.||.|++||..+++....+..| ..+....|+|++.+|++|+
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~-------------------- 116 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGT-------------------- 116 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEE--------------------
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEE--------------------
Confidence 3458999999999999999999999999998887777766 4555567899999999998
Q ss_pred eeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEE
Q psy9327 91 FRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQ 170 (641)
Q Consensus 91 ~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~ 170 (641)
.|+.|++||+.+++....+.+|.+.|++++|+|++.+|++|+.|++|++||+++++++..+.+|...|.+++
T Consensus 117 --------~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~ 188 (420)
T 3vl1_A 117 --------TEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIA 188 (420)
T ss_dssp --------TTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEE
T ss_pred --------CCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEE
Confidence 999999999999999998899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCEEEEEeCCCeEEEEecCCCceeeeccCC---Cceeeeccc------------CCCceeeee-----eeeeeCCC
Q psy9327 171 FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM---GKLVLSMKS------------KHPIWKYCK-----PVKYCNPK 230 (641)
Q Consensus 171 fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~---~~~v~s~~~------------~~~v~~~~~-----~l~s~~~d 230 (641)
|+|++..|++++.|++|++||+++++....+..+ ...+.++.. ..++..+.+ .+++++.+
T Consensus 189 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 268 (420)
T 3vl1_A 189 IIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS 268 (420)
T ss_dssp EETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT
T ss_pred EcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCC
Confidence 9999999999999999999999999888777642 222222211 111111111 26788899
Q ss_pred eeEEEec-CCCcceeeec--CCcceEEEEEcCCcc-EEEEecCCeEEEEEcCCCCe--Eecc----ccceEE-EEEcCcE
Q psy9327 231 HTLHICN-RKMEPLCNIH--ENTRVKSGAWDESGV-FIYTTSNHIKYAIVNGDHGI--IRTL----DLPIYI-TKIKGNQ 299 (641)
Q Consensus 231 ~~I~i~d-~~~~~~~~~~--~~~~I~sla~~p~g~-~L~t~s~~~k~~l~~~~~g~--I~~~----d~p~~~-~~~~g~~ 299 (641)
+.|++|| ........+. +...|.+++|+|++. ++++++.++.+.+|+..++. +..+ ..++.. ...++..
T Consensus 269 g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 348 (420)
T 3vl1_A 269 GVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGAL 348 (420)
T ss_dssp SCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEE
T ss_pred CeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCE
Confidence 9999999 4445444443 467899999999998 99999999999999987652 2222 223332 3456788
Q ss_pred EEEEeCCCCeEEEEeCC
Q psy9327 300 VYYLDRECSPHVLRIDP 316 (641)
Q Consensus 300 v~~~~~dg~i~v~~~~~ 316 (641)
+++++.|+.+++|++..
T Consensus 349 l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 349 FVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EEEETTTEEEEEEEECC
T ss_pred EEEecCCccEEEEeccC
Confidence 99999999999999886
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.5e-30 Score=273.24 Aligned_cols=278 Identities=12% Similarity=0.108 Sum_probs=219.4
Q ss_pred ceeeccCCCCeEEEEEccCC-CeEEEEeCCCcEEEEECccCccccccc--ccccCeEEEEEeC-CCCEEEEeceeeEEee
Q psy9327 2 LTKFETKSARVKGLSFHPKR-PWILSSLHNGVIQLWDYRMNTLLEKFD--EHEGPVRGICFHN-QQPIFVSGGKMIVMAY 77 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg-~~Lasg~~dg~I~iWD~~~~~~l~~~~--~h~~~V~~i~fsp-~~~~l~sgs~~~~~~~ 77 (641)
++.+.+|.+.|++++|+|++ ++|++|+.||.|++||+.+++....+. +|.+.|.+++|+| ++.++++++
T Consensus 66 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~------- 138 (383)
T 3ei3_B 66 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS------- 138 (383)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEE-------
T ss_pred EEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEe-------
Confidence 46788999999999999999 899999999999999999887766665 6999999999999 678999997
Q ss_pred eceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc---CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG---HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN 154 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~---h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~ 154 (641)
.|+.|++||+++ ..+..+.. |...|.+++|+|++++|++|+.|+.|++||+ +++
T Consensus 139 ---------------------~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~ 195 (383)
T 3ei3_B 139 ---------------------IRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGH 195 (383)
T ss_dssp ---------------------TTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSC
T ss_pred ---------------------CCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCC
Confidence 999999999996 44555544 4488999999999999999999999999999 577
Q ss_pred eEEEEccCCCCEEEEEEecCCC-EEEEEeCCCeEEEEecCC----CceeeeccCCCceeeecccCCCceeeeeeeeeeCC
Q psy9327 155 CICVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISG----LRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNP 229 (641)
Q Consensus 155 ~i~~l~~h~~~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~----~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~ 229 (641)
++..+.+|...|.+++|+|++. ++++|+.|++|++||+++ +.....+ ++...+.++.....-- ..+++++.
T Consensus 196 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~---~~l~~~~~ 271 (383)
T 3ei3_B 196 EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDS---TKLLTTDQ 271 (383)
T ss_dssp EEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTS---CEEEEEES
T ss_pred EEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCC---CEEEEEcC
Confidence 8899999999999999999998 999999999999999987 4445444 4556666544221011 12667789
Q ss_pred CeeEEEec-CCCcceeeec------------------CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecccc-
Q psy9327 230 KHTLHICN-RKMEPLCNIH------------------ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDL- 288 (641)
Q Consensus 230 d~~I~i~d-~~~~~~~~~~------------------~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~- 288 (641)
|+.|++|| ........+. ....+..++|+|+|.+ +++.++.+.+|+..++. +..+..
T Consensus 272 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~ 349 (383)
T 3ei3_B 272 RNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDP 349 (383)
T ss_dssp SSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBT
T ss_pred CCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCC
Confidence 99999999 3333322221 1234555677777766 77889999999977664 444432
Q ss_pred ----c--eEEEEEcCcEEEEEeCCCCeEEEEeCC
Q psy9327 289 ----P--IYITKIKGNQVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 289 ----p--~~~~~~~g~~v~~~~~dg~i~v~~~~~ 316 (641)
. ...+..++..+++++ |+.+++|++++
T Consensus 350 ~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 350 NAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp TBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 1 224666788888887 99999999875
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-30 Score=271.60 Aligned_cols=250 Identities=15% Similarity=0.225 Sum_probs=209.1
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECc--cCcccccccccccCeEEEEEeCC--CCEEEEeceeeEEe
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYR--MNTLLEKFDEHEGPVRGICFHNQ--QPIFVSGGKMIVMA 76 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~--~~~~l~~~~~h~~~V~~i~fsp~--~~~l~sgs~~~~~~ 76 (641)
++..+++|.+.|++++|+|++++|++|+.||.|++||+. +++.+..+..|.++|.+++|+|+ +.+|++|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~------ 76 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS------ 76 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE------
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEec------
Confidence 467899999999999999999999999999999999998 66778888999999999999977 89999998
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe--eEEEEccCCCCeEEEEEccC--CCEEEEEeCCCeEEEEECCC
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK--CIFTLLGHLDYIRTTFFHHE--YPWILSASDDQTIRIWYWQS 152 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~--~~~~~~~h~~~V~~v~fsp~--~~~l~sgs~Dg~I~vWd~~~ 152 (641)
.|+.|++||+.+++ .+..+.+|.+.|.+++|+|+ +.++++++.|+.|++||+++
T Consensus 77 ----------------------~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 134 (379)
T 3jrp_A 77 ----------------------YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKE 134 (379)
T ss_dssp ----------------------TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCT
T ss_pred ----------------------cCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCC
Confidence 99999999999997 78888899999999999999 99999999999999999988
Q ss_pred Ce--eEEEEccCCCCEEEEEEec-------------CCCEEEEEeCCCeEEEEecCCCc----eeeeccCCCceeeeccc
Q psy9327 153 RN--CICVLTGHNHYVMCAQFHP-------------TDDIVVSASLDQTIRVWDISGLR----KKNVAPGMGKLVLSMKS 213 (641)
Q Consensus 153 ~~--~i~~l~~h~~~V~sl~fsp-------------~g~~lvSgs~DgtI~IWD~~~~~----~~~~~~~~~~~v~s~~~ 213 (641)
+. ....+.+|...|.+++|+| ++..+++++.|+.|++||+++.. ....+.+|...+.++..
T Consensus 135 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~ 214 (379)
T 3jrp_A 135 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 214 (379)
T ss_dssp TSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred CCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEE
Confidence 73 4556788999999999999 69999999999999999998765 33556667777766543
Q ss_pred CCCceeeeeeeeeeCCCeeEEEecCCCc----ceeee---cCCcceEEEEEcCCccEEEEecCCeEEEEEcCC
Q psy9327 214 KHPIWKYCKPVKYCNPKHTLHICNRKME----PLCNI---HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 214 ~~~v~~~~~~l~s~~~d~~I~i~d~~~~----~~~~~---~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~ 279 (641)
. |-......+++++.|+.|++||.... ..... .+...|.+++|+|+|.+|++++.++.+.+|+..
T Consensus 215 s-p~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 215 S-PTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp C-CCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred C-CCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 2 21000122678889999999994321 11111 246789999999999999999988888888754
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-29 Score=273.83 Aligned_cols=276 Identities=19% Similarity=0.319 Sum_probs=234.0
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEe--CCCCEEEEeceeeEEeeec
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH--NQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fs--p~~~~l~sgs~~~~~~~~~ 79 (641)
+..+.+|.+.|.+++|+|++ ++++|+.||+|++||+++++.+..+.+|.++|.+++|+ +++.++++|+
T Consensus 155 ~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s--------- 224 (464)
T 3v7d_B 155 LLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGS--------- 224 (464)
T ss_dssp EEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEE---------
T ss_pred EEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEc---------
Confidence 46788999999999999988 89999999999999999999999999999999999999 5778999997
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCe-----------------------eEEEEccCCCCeEEEEEccCCCEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK-----------------------CIFTLLGHLDYIRTTFFHHEYPWI 136 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~-----------------------~~~~~~~h~~~V~~v~fsp~~~~l 136 (641)
.|++|++||+.++. .+..+.+|...|.++ ++++.++
T Consensus 225 -------------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l 283 (464)
T 3v7d_B 225 -------------------RDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIV 283 (464)
T ss_dssp -------------------TTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEE
T ss_pred -------------------CCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEE
Confidence 99999999998765 256788899999877 5778899
Q ss_pred EEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCC
Q psy9327 137 LSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHP 216 (641)
Q Consensus 137 ~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~ 216 (641)
++|+.|+.|++||+++++++..+.+|...|.+++|+|++..+++|+.||+|++||+++++....+.+|...+.++....
T Consensus 284 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~- 362 (464)
T 3v7d_B 284 VSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD- 362 (464)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS-
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999998888877755432
Q ss_pred ceeeeeeeeeeCCCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe-cc----ccce
Q psy9327 217 IWKYCKPVKYCNPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR-TL----DLPI 290 (641)
Q Consensus 217 v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~-~~----d~p~ 290 (641)
..+++++.|+.|++|| .........++...+..++|++++.++++++ ++.+.+|+.+++... .. ..++
T Consensus 363 -----~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v 436 (464)
T 3v7d_B 363 -----KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQI 436 (464)
T ss_dssp -----SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEE
T ss_pred -----CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcE
Confidence 1267888999999999 4455666666778888899999999999998 889999998887643 21 2233
Q ss_pred EEEEEcCcE-EEEEeCCCCeEEEEeC
Q psy9327 291 YITKIKGNQ-VYYLDRECSPHVLRID 315 (641)
Q Consensus 291 ~~~~~~g~~-v~~~~~dg~i~v~~~~ 315 (641)
.....++.. +++.+.||.+.+|.+|
T Consensus 437 ~~v~~~~~~l~~~~~~~g~~~i~~ld 462 (464)
T 3v7d_B 437 WSVNFKGKTLVAAVEKDGQSFLEILD 462 (464)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEEE
T ss_pred EEEEecCCEEEEEEEeCCeEEEEEee
Confidence 333444554 4556677777777654
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-29 Score=291.03 Aligned_cols=202 Identities=25% Similarity=0.436 Sum_probs=176.2
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEecee-eEEeee--
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKM-IVMAYQ-- 78 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~-~~~~~~-- 78 (641)
+..+.+|.++|.+++|+|++++|++|+.||.|++||+.+++.+..+..|.+.|.+++|+|+++++++++.. .+..|+
T Consensus 48 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~ 127 (814)
T 3mkq_A 48 VRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWE 127 (814)
T ss_dssp EEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGG
T ss_pred EEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECC
Confidence 46788999999999999999999999999999999999999999999999999999999999999998742 222222
Q ss_pred -------------ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCC-CCeEEEEEcc--CCCEEEEEeCC
Q psy9327 79 -------------GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL-DYIRTTFFHH--EYPWILSASDD 142 (641)
Q Consensus 79 -------------~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~-~~V~~v~fsp--~~~~l~sgs~D 142 (641)
+.+......|.....+++++.|++|++||+.+++....+..|. ..+.+++|+| +++++++|+.|
T Consensus 128 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 207 (814)
T 3mkq_A 128 NNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD 207 (814)
T ss_dssp GTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTT
T ss_pred CCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCC
Confidence 2233334445456788899999999999999988888777655 8999999999 99999999999
Q ss_pred CeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC
Q psy9327 143 QTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203 (641)
Q Consensus 143 g~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~ 203 (641)
+.|++||+++++++..+.+|...|.+++|+|+++.+++++.||+|++||+.+++....+..
T Consensus 208 g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 268 (814)
T 3mkq_A 208 LTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV 268 (814)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECC
T ss_pred CEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeec
Confidence 9999999999999999999999999999999999999999999999999998776655543
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-29 Score=269.05 Aligned_cols=313 Identities=15% Similarity=0.165 Sum_probs=216.4
Q ss_pred eeeccCCCCeEEEEEcc-CCCeEEEEeCCCcEEEEECccCccccccc-------------ccccCeEEEEEeC-CCCEEE
Q psy9327 3 TKFETKSARVKGLSFHP-KRPWILSSLHNGVIQLWDYRMNTLLEKFD-------------EHEGPVRGICFHN-QQPIFV 67 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~~~~l~~~~-------------~h~~~V~~i~fsp-~~~~l~ 67 (641)
..+.+|.+.|++++|+| ++++|++|+.||.|++||+.+++....+. .|.++|.+++|+| ++.+++
T Consensus 37 ~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 116 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT 116 (408)
T ss_dssp EECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEE
T ss_pred eeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEE
Confidence 46788999999999999 99999999999999999999887666553 5999999999999 777888
Q ss_pred Eece-eeEEeeec-------------eeeecccCCc--ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc
Q psy9327 68 SGGK-MIVMAYQG-------------CILESRNEPC--LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131 (641)
Q Consensus 68 sgs~-~~~~~~~~-------------~~~~~~~~~~--~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp 131 (641)
+++. ..+..|+- .+......+. ....+++++.|+.|++||+++++.+..+.+|.+.|.+++|+|
T Consensus 117 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~ 196 (408)
T 4a11_B 117 SSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSP 196 (408)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECS
T ss_pred EEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECC
Confidence 8873 33333321 1112222222 233788899999999999999999999999999999999999
Q ss_pred CCC-EEEEEeCCCeEEEEECCCCe-eEEEE---------------ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 132 EYP-WILSASDDQTIRIWYWQSRN-CICVL---------------TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 132 ~~~-~l~sgs~Dg~I~vWd~~~~~-~i~~l---------------~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
+++ ++++|+.|+.|++||++++. ++..+ .+|...|.+++|+|++.+|++++.||.|++||+.+
T Consensus 197 ~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (408)
T 4a11_B 197 RYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSN 276 (408)
T ss_dssp SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCC
Confidence 998 58999999999999998765 44444 57899999999999999999999999999999998
Q ss_pred CceeeeccCCCceeeecc-cCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCe
Q psy9327 195 LRKKNVAPGMGKLVLSMK-SKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHI 271 (641)
Q Consensus 195 ~~~~~~~~~~~~~v~s~~-~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~ 271 (641)
++......+......... ...........+..+..++.+.+|| .....+..+. +...|.+++|+|++.+|++++.|+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 356 (408)
T 4a11_B 277 GENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDC 356 (408)
T ss_dssp CCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTS
T ss_pred CccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCC
Confidence 876554433210000000 0000000011245566789999999 5566666665 578999999999999999999999
Q ss_pred EEEEEcCCCCeE-eccccc---eEEEEEcCcEEEEEeCCCCeEEEEeC
Q psy9327 272 KYAIVNGDHGII-RTLDLP---IYITKIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 272 k~~l~~~~~g~I-~~~d~p---~~~~~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
.+.+|+.+.+.. ...+.. ..............+.++.+++|...
T Consensus 357 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 357 NILAWVPSLYEPVPDDDETTTKSQLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp CEEEEEECC---------------------------------------
T ss_pred eEEEEeCCCCCccCCCCceEeccccccccceeecccCccCceeecCCc
Confidence 999999877643 222111 11111223344456678999999654
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-29 Score=311.13 Aligned_cols=246 Identities=17% Similarity=0.270 Sum_probs=204.7
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
.+.+|.+.|++++|+|+|+++++|+.||+|++||..+++.+..+.+|.+.|.+++|+|++.++++|+
T Consensus 610 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~------------- 676 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCS------------- 676 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-------------
T ss_pred EEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEe-------------
Confidence 5679999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc--CCCEEEEEeCCCeEEEEECCCCeeEEEEcc
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp--~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~ 161 (641)
.|++|++||+.+++++.++.+|.+.|.+++|+| ++.++++|+.|+.|++||+++++++..+.+
T Consensus 677 ---------------~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~ 741 (1249)
T 3sfz_A 677 ---------------ADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFG 741 (1249)
T ss_dssp ---------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECC
T ss_pred ---------------CCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecC
Confidence 999999999999999999999999999999999 556899999999999999999999999999
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCC-------------ceeeecc----------------
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG-------------KLVLSMK---------------- 212 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~-------------~~v~s~~---------------- 212 (641)
|.+.|++++|+|++..+++++.||+|++||+++++....+.... ..+.++.
T Consensus 742 h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v 821 (1249)
T 3sfz_A 742 HTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKV 821 (1249)
T ss_dssp CSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEE
T ss_pred CCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcE
Confidence 99999999999999999999999999999998876654432100 0111100
Q ss_pred -----------------cCCCceeeeee-----eeeeCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEec
Q psy9327 213 -----------------SKHPIWKYCKP-----VKYCNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTS 268 (641)
Q Consensus 213 -----------------~~~~v~~~~~~-----l~s~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s 268 (641)
...++..+.++ +++++.++.+.+|| .....+..+. +...|.+++|+|+|.++++++
T Consensus 822 ~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s 901 (1249)
T 3sfz_A 822 LLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTAS 901 (1249)
T ss_dssp EEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEe
Confidence 01111122221 56677888888888 3344444443 467788888888888888888
Q ss_pred CCeEEEEEc
Q psy9327 269 NHIKYAIVN 277 (641)
Q Consensus 269 ~~~k~~l~~ 277 (641)
.++.+.+|+
T Consensus 902 ~dg~v~vw~ 910 (1249)
T 3sfz_A 902 DDQTIRVWE 910 (1249)
T ss_dssp TTSCEEEEE
T ss_pred CCCeEEEEE
Confidence 888887775
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-29 Score=270.53 Aligned_cols=282 Identities=11% Similarity=0.116 Sum_probs=228.4
Q ss_pred ccCCCCe--EEEEEccCCCeEEEEeCCCcEEEEECccCcccccccc-cccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 6 ETKSARV--KGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDE-HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 6 ~~H~~~V--~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~-h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
.+|.+.+ .+++|++ ..+++++.||.|++||+.+++....+.. |.+.|.+++|+|++.+|++|+
T Consensus 88 ~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~------------ 153 (401)
T 4aez_A 88 PGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGL------------ 153 (401)
T ss_dssp TTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEE------------
T ss_pred CCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEEC------------
Confidence 3565553 4455554 5688899999999999999988777765 899999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC-CCeeEEEEcc
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ-SRNCICVLTG 161 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~-~~~~i~~l~~ 161 (641)
.||.|++||+.+++.+..+.+|.+.|.+++|+ +..+++|+.|+.|++||++ .+..+..+.+
T Consensus 154 ----------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 215 (401)
T 4aez_A 154 ----------------GNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQG 215 (401)
T ss_dssp ----------------TTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEEC
T ss_pred ----------------CCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcC
Confidence 99999999999999999999999999999994 5689999999999999998 5677888999
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeee--CCCeeEEEec-C
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYC--NPKHTLHICN-R 238 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~--~~d~~I~i~d-~ 238 (641)
|.+.|.+++|+|++.++++|+.|++|++||+++++....+.++...+.++... |--.. -++++ +.++.+++|| .
T Consensus 216 ~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~-p~~~~--ll~~~~gs~d~~i~i~d~~ 292 (401)
T 4aez_A 216 HSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWC-PWQSN--LLATGGGTMDKQIHFWNAA 292 (401)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEEC-TTSTT--EEEEECCTTTCEEEEEETT
T ss_pred CCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEEC-CCCCC--EEEEecCCCCCEEEEEECC
Confidence 99999999999999999999999999999999998888887777666654422 11000 13343 3799999999 5
Q ss_pred CCcceeeecCCcceEEEEEcCCccEEEE--ecCCeEEEEEcCCCCeEe-cc-----ccceE--EEEEcCcEEEEEeCCCC
Q psy9327 239 KMEPLCNIHENTRVKSGAWDESGVFIYT--TSNHIKYAIVNGDHGIIR-TL-----DLPIY--ITKIKGNQVYYLDRECS 308 (641)
Q Consensus 239 ~~~~~~~~~~~~~I~sla~~p~g~~L~t--~s~~~k~~l~~~~~g~I~-~~-----d~p~~--~~~~~g~~v~~~~~dg~ 308 (641)
....+..+.....|.+++|+|++..+++ |+.++.+.+|+..++... .. ..++. .+..++..+++++.||.
T Consensus 293 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~ 372 (401)
T 4aez_A 293 TGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDEN 372 (401)
T ss_dssp TCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSE
T ss_pred CCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCc
Confidence 6777778888889999999999999999 558999999997775432 21 11222 35567889999999999
Q ss_pred eEEEEeCCcchhhh
Q psy9327 309 PHVLRIDPTEFKFK 322 (641)
Q Consensus 309 i~v~~~~~~~~~~k 322 (641)
+++|++.+++...+
T Consensus 373 i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 373 LKFWRVYDGDHVKR 386 (401)
T ss_dssp EEEEECCC------
T ss_pred EEEEECCCCccccc
Confidence 99999998665443
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=271.09 Aligned_cols=274 Identities=15% Similarity=0.177 Sum_probs=233.5
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeeccc
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRN 86 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~ 86 (641)
+|.+.|++++|+|++++|++|+.||.|++|| .+++.+..+..|..+|.+++|+|++.+|++++
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---------------- 168 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMD---------------- 168 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEE----------------
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEe----------------
Confidence 3788999999999999999999999999999 67788888999999999999999999999998
Q ss_pred CCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCC---------------eEEEEEccCCCEEEEEeCCCeEEEEECC
Q psy9327 87 EPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY---------------IRTTFFHHEYPWILSASDDQTIRIWYWQ 151 (641)
Q Consensus 87 ~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~---------------V~~v~fsp~~~~l~sgs~Dg~I~vWd~~ 151 (641)
.|+.|++||+.+++.+..+..|... +.+++|+|++ .+++++.|+.|++||++
T Consensus 169 ------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~ 235 (425)
T 1r5m_A 169 ------------VENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQIT 235 (425)
T ss_dssp ------------TTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETT
T ss_pred ------------cCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcC
Confidence 9999999999999999999988877 9999999985 58999999999999999
Q ss_pred CCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCe
Q psy9327 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKH 231 (641)
Q Consensus 152 ~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~ 231 (641)
+++.+..+.+|...|.+++|+|++..+++++.|+.|++||+++++....+.++...+.++.....- .+++++.++
T Consensus 236 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-----~l~~~~~d~ 310 (425)
T 1r5m_A 236 EKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-----KVISCSMDG 310 (425)
T ss_dssp CSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-----EEEEEETTS
T ss_pred CCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-----EEEEEeCCC
Confidence 999999999999999999999999999999999999999999998888888777777664432211 367788999
Q ss_pred eEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe---------------------Eecccc
Q psy9327 232 TLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI---------------------IRTLDL 288 (641)
Q Consensus 232 ~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~---------------------I~~~d~ 288 (641)
.+++|| .....+..+. +...+.+++|+|++.++++++.++.+.+|+..++. +..+..
T Consensus 311 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (425)
T 1r5m_A 311 SVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQS 390 (425)
T ss_dssp EEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECC
T ss_pred cEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcC
Confidence 999999 4555555554 37799999999999999999999999999876554 443322
Q ss_pred -----ceEE--EEEcCcEEEEEeCCCCeEEEEeC
Q psy9327 289 -----PIYI--TKIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 289 -----p~~~--~~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
++.. +..++..+++++.||.+++|+++
T Consensus 391 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 391 SQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp TTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred cccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 3333 34567889999999999999875
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-28 Score=275.19 Aligned_cols=200 Identities=15% Similarity=0.274 Sum_probs=175.9
Q ss_pred ceeeccCCCC-eEEEEEcc--CCCeEEEEeCCCcEEEEECccC--------cccccccccccCeEEEEEeCCCCEEEEec
Q psy9327 2 LTKFETKSAR-VKGLSFHP--KRPWILSSLHNGVIQLWDYRMN--------TLLEKFDEHEGPVRGICFHNQQPIFVSGG 70 (641)
Q Consensus 2 l~~~~~H~~~-V~~l~fsp--dg~~Lasg~~dg~I~iWD~~~~--------~~l~~~~~h~~~V~~i~fsp~~~~l~sgs 70 (641)
+..+.+|.+. |++++|+| ++++|++|+.||+|++||+.++ +.+..+..|..+|.+++|+|++.++++++
T Consensus 56 ~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 135 (615)
T 1pgu_A 56 VVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVG 135 (615)
T ss_dssp EEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred ceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEec
Confidence 4678999999 99999999 9999999999999999999754 67778888999999999999999999987
Q ss_pred ee-----eEEeee------------ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC---CeEEEEEc
Q psy9327 71 KM-----IVMAYQ------------GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD---YIRTTFFH 130 (641)
Q Consensus 71 ~~-----~~~~~~------------~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~---~V~~v~fs 130 (641)
.. .+..|+ +.+......|+....+++++.|+.|++||..+++.+..+.+|.+ .|.+++|+
T Consensus 136 ~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 215 (615)
T 1pgu_A 136 EGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFS 215 (615)
T ss_dssp CCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEEC
T ss_pred cCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEEC
Confidence 43 233332 23444455566666888999999999999999999999999999 99999999
Q ss_pred cC-CCEEEEEeCCCeEEEEECCCCeeEEEE-c---cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 131 HE-YPWILSASDDQTIRIWYWQSRNCICVL-T---GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 131 p~-~~~l~sgs~Dg~I~vWd~~~~~~i~~l-~---~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
|+ +.++++++.|+.|++||+++++++..+ . +|...|.+++|+ ++..+++++.|++|++||+++++....+.
T Consensus 216 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 291 (615)
T 1pgu_A 216 PDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWT 291 (615)
T ss_dssp STTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence 99 999999999999999999999999999 6 899999999999 99999999999999999999877665544
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-30 Score=275.59 Aligned_cols=280 Identities=15% Similarity=0.225 Sum_probs=232.4
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECcc----CcccccccccccCeEEEEEeCC-CCEEEEeceeeEEeeecee
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRM----NTLLEKFDEHEGPVRGICFHNQ-QPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~----~~~l~~~~~h~~~V~~i~fsp~-~~~l~sgs~~~~~~~~~~~ 81 (641)
.|.+.|++++|+|++.+|++|+.||.|++||+.+ .+.+..+..|.++|.+++|+|+ +.++++++
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~----------- 133 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGG----------- 133 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEEC-----------
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEc-----------
Confidence 5889999999999999999999999999999987 3577888899999999999998 88999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCe------eEEE---EccCCCCeEEEEEccC-CCEEEEEeCCCeEEEEECC
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRK------CIFT---LLGHLDYIRTTFFHHE-YPWILSASDDQTIRIWYWQ 151 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~------~~~~---~~~h~~~V~~v~fsp~-~~~l~sgs~Dg~I~vWd~~ 151 (641)
.|+.|++||+.+++ .... +.+|.+.|.+++|+|+ +.++++++.|+.|++||++
T Consensus 134 -----------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 196 (416)
T 2pm9_A 134 -----------------NNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLK 196 (416)
T ss_dssp -----------------SSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETT
T ss_pred -----------------CCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC
Confidence 99999999999886 3333 4679999999999999 7899999999999999999
Q ss_pred CCeeEEEEccC------CCCEEEEEEecCC-CEEEEEeCCC---eEEEEecCCC-ceeeecc-CCCceeeecccCCCcee
Q psy9327 152 SRNCICVLTGH------NHYVMCAQFHPTD-DIVVSASLDQ---TIRVWDISGL-RKKNVAP-GMGKLVLSMKSKHPIWK 219 (641)
Q Consensus 152 ~~~~i~~l~~h------~~~V~sl~fsp~g-~~lvSgs~Dg---tI~IWD~~~~-~~~~~~~-~~~~~v~s~~~~~~v~~ 219 (641)
+++++..+..| ...|.+++|+|++ .++++++.|+ .|++||++++ .....+. +|...+.++.....-
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~-- 274 (416)
T 2pm9_A 197 AKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQD-- 274 (416)
T ss_dssp TTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSC--
T ss_pred CCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCC--
Confidence 99999999876 7899999999997 6999999999 9999999986 5566666 677777665432100
Q ss_pred eeeeeeeeCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCc-cEEEEecCCeEEEEEcCCCCeEec-----------
Q psy9327 220 YCKPVKYCNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESG-VFIYTTSNHIKYAIVNGDHGIIRT----------- 285 (641)
Q Consensus 220 ~~~~l~s~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g-~~L~t~s~~~k~~l~~~~~g~I~~----------- 285 (641)
...+++++.|+.|++|| .....+..+. +...|.+++|+|++ .++++++.++.+.+|+..++....
T Consensus 275 -~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 353 (416)
T 2pm9_A 275 -EHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQE 353 (416)
T ss_dssp -SSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC---------
T ss_pred -CCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccC
Confidence 01267788999999999 5566666654 47789999999998 899999999999999876543211
Q ss_pred ----------------------------cccc--eEEEEEcCcEEEEEeCCCCeEEEEeCCc
Q psy9327 286 ----------------------------LDLP--IYITKIKGNQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 286 ----------------------------~d~p--~~~~~~~g~~v~~~~~dg~i~v~~~~~~ 317 (641)
...+ ...+..+|..+++++.|+.+++|++.+.
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 354 SETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp -------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred CcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 1112 2336678889999999999999998764
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=265.55 Aligned_cols=285 Identities=14% Similarity=0.154 Sum_probs=220.7
Q ss_pred eeeccCCCCeEEEEEccCCCeE-EEEeC---CCcEEEEECccCcccccc-cccccCeEEEEEeCC---CCEEEEeceeeE
Q psy9327 3 TKFETKSARVKGLSFHPKRPWI-LSSLH---NGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQ---QPIFVSGGKMIV 74 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~L-asg~~---dg~I~iWD~~~~~~l~~~-~~h~~~V~~i~fsp~---~~~l~sgs~~~~ 74 (641)
..+++|.+.|.+++|+|+++.+ ++|+. ||.|++||+.+++..... ..|..+|.+++|+|+ +.++++|+
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~---- 87 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGD---- 87 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEE----
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEec----
Confidence 3467899999999999999755 45655 899999999988765443 379999999999998 69999997
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe-eEEEEccCCCCeEEEEE------ccCCCEEEEEeCCCeEEE
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK-CIFTLLGHLDYIRTTFF------HHEYPWILSASDDQTIRI 147 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~-~~~~~~~h~~~V~~v~f------sp~~~~l~sgs~Dg~I~v 147 (641)
.|+.|++||+.+++ ++..+.+|.+.|.+++| +|++++|++|+.|+.|++
T Consensus 88 ------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~v 143 (357)
T 3i2n_A 88 ------------------------FGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKV 143 (357)
T ss_dssp ------------------------TTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEE
T ss_pred ------------------------CCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEE
Confidence 99999999999988 89999999999999955 678999999999999999
Q ss_pred EECCCCe-eEEEEccCCC----CEEEEE----EecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCce
Q psy9327 148 WYWQSRN-CICVLTGHNH----YVMCAQ----FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIW 218 (641)
Q Consensus 148 Wd~~~~~-~i~~l~~h~~----~V~sl~----fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~ 218 (641)
||+++++ ++..+..|.+ .+.+++ |+|++.++++++.||.|++||+++++.... ..+...+.++... |.-
T Consensus 144 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~-~~~ 221 (357)
T 3i2n_A 144 WDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFD-RKD 221 (357)
T ss_dssp ECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEES-CSS
T ss_pred EeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcC-CCC
Confidence 9999887 6778876655 799998 678999999999999999999999887544 3345555554322 100
Q ss_pred eeeeeeeeeCCCeeEEEec-CCCcceeee------cCCcceEEEEEcCCcc-EEEEecCCeEEEEEcCCCCe--------
Q psy9327 219 KYCKPVKYCNPKHTLHICN-RKMEPLCNI------HENTRVKSGAWDESGV-FIYTTSNHIKYAIVNGDHGI-------- 282 (641)
Q Consensus 219 ~~~~~l~s~~~d~~I~i~d-~~~~~~~~~------~~~~~I~sla~~p~g~-~L~t~s~~~k~~l~~~~~g~-------- 282 (641)
.-...+++++.++.|.+|| ........+ .+...|.+++|+|++. ++++++.++.+.+|+.+.+.
T Consensus 222 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 301 (357)
T 3i2n_A 222 ISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSE 301 (357)
T ss_dssp SSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTT
T ss_pred CCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCC
Confidence 0011266778999999999 333333222 4578999999999998 89999999999999865431
Q ss_pred ------------Eecc---ccceEE--EEEcCcEEE-EEeCCCCeEEEEeCCc
Q psy9327 283 ------------IRTL---DLPIYI--TKIKGNQVY-YLDRECSPHVLRIDPT 317 (641)
Q Consensus 283 ------------I~~~---d~p~~~--~~~~g~~v~-~~~~dg~i~v~~~~~~ 317 (641)
+..+ ..++.. +..++..++ +++.||.+++|++...
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 302 GIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp SCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred CCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 2111 222322 445677776 8999999999999864
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-29 Score=275.37 Aligned_cols=282 Identities=14% Similarity=0.176 Sum_probs=209.2
Q ss_pred eeeccCCCCeEEEEEcc-CCCeEEEEeCCCcEEEEECccCcc--cccccccccCeEEEEEeC-CCCEEEEeceeeEEeee
Q psy9327 3 TKFETKSARVKGLSFHP-KRPWILSSLHNGVIQLWDYRMNTL--LEKFDEHEGPVRGICFHN-QQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~~~~--l~~~~~h~~~V~~i~fsp-~~~~l~sgs~~~~~~~~ 78 (641)
....+|..+|+||+||| ++++||+|+.||+|+|||+.+++. ...+.+|.++|++|+|+| ++.+|++|+
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s-------- 184 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASS-------- 184 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEEC--------
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEe--------
Confidence 45678999999999999 567999999999999999987654 345668999999999998 688999998
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc--CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeE
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG--HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~--h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i 156 (641)
.|++|++||++++........ +...+.+++|+|++.+|++|+.|+.|++||++. +++
T Consensus 185 --------------------~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~ 243 (435)
T 4e54_B 185 --------------------MEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KEL 243 (435)
T ss_dssp --------------------SSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBC
T ss_pred --------------------CCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-cee
Confidence 999999999987765444433 344678999999999999999999999999864 567
Q ss_pred EEEccCCCCEEEEEEecCCC-EEEEEeCCCeEEEEecCCCceeeec---cCCCceeeecccCCCceeeeeeeeeeCCCee
Q psy9327 157 CVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKNVA---PGMGKLVLSMKSKHPIWKYCKPVKYCNPKHT 232 (641)
Q Consensus 157 ~~l~~h~~~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~~~~~~~~---~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~ 232 (641)
..+.+|...|++++|+|++. ++++|+.|++|++||+++.+....+ .+|...|.++.. +|-- ..+++++.|+.
T Consensus 244 ~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~-spdg---~~l~s~~~D~~ 319 (435)
T 4e54_B 244 WNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACF-SPDG---ARLLTTDQKSE 319 (435)
T ss_dssp CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCB-CTTS---SEEEEEESSSC
T ss_pred EEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeE-CCCC---CeeEEEcCCCE
Confidence 78899999999999999875 7889999999999999887655443 345566665432 2211 12778889999
Q ss_pred EEEec-CCCcceeeecC-------CcceEEEEEcCCccEEEEec------------CCeEEEEEcCCCCeEe-ccccc--
Q psy9327 233 LHICN-RKMEPLCNIHE-------NTRVKSGAWDESGVFIYTTS------------NHIKYAIVNGDHGIIR-TLDLP-- 289 (641)
Q Consensus 233 I~i~d-~~~~~~~~~~~-------~~~I~sla~~p~g~~L~t~s------------~~~k~~l~~~~~g~I~-~~d~p-- 289 (641)
|++|| ..+.....+.. ...+....|+|++..++++. .++.+.+|+.++|.+. .+..+
T Consensus 320 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~ 399 (435)
T 4e54_B 320 IRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPES 399 (435)
T ss_dssp EEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSC
T ss_pred EEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCC
Confidence 99999 33443332211 12234567777776666653 2345778887776543 22111
Q ss_pred -----eEEEEEcCcEEEEEeCCCCeEEEEeCCcc
Q psy9327 290 -----IYITKIKGNQVYYLDRECSPHVLRIDPTE 318 (641)
Q Consensus 290 -----~~~~~~~g~~v~~~~~dg~i~v~~~~~~~ 318 (641)
+..++.+|..+++++ |+.|++|++.+++
T Consensus 400 ~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk 432 (435)
T 4e54_B 400 SGISSLNEFNPMGDTLASAM-GYHILIWSQQEAR 432 (435)
T ss_dssp CCCCCEEEECTTSSCEEEEC-SSEEEECCCC---
T ss_pred CcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCe
Confidence 223556788888765 7899999988764
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-29 Score=289.83 Aligned_cols=242 Identities=20% Similarity=0.309 Sum_probs=201.5
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
+.+.+|.+.|.+++|+|++++|++|+.||+|++||+.+++.+..+.+|.+.|.+++|+|++.+|++|+
T Consensus 424 ~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s------------ 491 (694)
T 3dm0_A 424 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSAS------------ 491 (694)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEE------------
T ss_pred ceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEe------------
Confidence 46889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE---ccCCCCeEEEEEccCC--CEEEEEeCCCeEEEEECCCCeeEE
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL---LGHLDYIRTTFFHHEY--PWILSASDDQTIRIWYWQSRNCIC 157 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~---~~h~~~V~~v~fsp~~--~~l~sgs~Dg~I~vWd~~~~~~i~ 157 (641)
.|++|++||.......... .+|.+.|.+++|+|++ ..+++|+.|++|++||++++++..
T Consensus 492 ----------------~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~ 555 (694)
T 3dm0_A 492 ----------------RDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRS 555 (694)
T ss_dssp ----------------TTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEE
T ss_pred ----------------CCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEE
Confidence 9999999998765443332 4689999999999986 689999999999999999999999
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
.+.+|.+.|++++|+|++.+|+||+.||+|++||+++++....+..+ ..+.++.. +|- ..+..+..++.|++||
T Consensus 556 ~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~-sp~----~~~l~~~~~~~i~iwd 629 (694)
T 3dm0_A 556 TLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVIHALCF-SPN----RYWLCAATEHGIKIWD 629 (694)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCS-SCEEEEEE-CSS----SSEEEEEETTEEEEEE
T ss_pred EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCC-CcEEEEEE-cCC----CcEEEEEcCCCEEEEE
Confidence 99999999999999999999999999999999999999887766543 33333221 111 1133344567799999
Q ss_pred CC-CcceeeecC--------------------CcceEEEEEcCCccEEEEecCCeEEEEEcC
Q psy9327 238 RK-MEPLCNIHE--------------------NTRVKSGAWDESGVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 238 ~~-~~~~~~~~~--------------------~~~I~sla~~p~g~~L~t~s~~~k~~l~~~ 278 (641)
.. ...+..+.. ...+.+++|+|+|.+|++|+.|+.+.+|+.
T Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 630 LESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGI 691 (694)
T ss_dssp TTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEec
Confidence 43 333332221 123788999999999999999999999874
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-29 Score=274.33 Aligned_cols=244 Identities=16% Similarity=0.244 Sum_probs=194.8
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc-----------ccccccccc------------cCeEEEEEeCCC-
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT-----------LLEKFDEHE------------GPVRGICFHNQQ- 63 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~-----------~l~~~~~h~------------~~V~~i~fsp~~- 63 (641)
|.+.|++++|+|+|++||+|+.||.|++||+.+++ ....+.+|. ++|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 57899999999999999999999999999998776 477788898 899999999998
Q ss_pred -CEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeE----------------------------
Q psy9327 64 -PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCI---------------------------- 114 (641)
Q Consensus 64 -~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~---------------------------- 114 (641)
..+++++ .|++|++||+.++...
T Consensus 107 ~~~l~s~s----------------------------~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 158 (447)
T 3dw8_B 107 AAQFLLST----------------------------NDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFR 158 (447)
T ss_dssp SSEEEEEE----------------------------CSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEE
T ss_pred cceEEEeC----------------------------CCCeEEEEecccccCCcceecccCccccccCcccccceEecccc
Confidence 7899997 9999999999765432
Q ss_pred -----------EE-EccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCC-CeeEEE-------EccCCCCEEEEEEecC
Q psy9327 115 -----------FT-LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS-RNCICV-------LTGHNHYVMCAQFHPT 174 (641)
Q Consensus 115 -----------~~-~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~-~~~i~~-------l~~h~~~V~sl~fsp~ 174 (641)
.. ..+|.+.|.+++|+|++.+|++| .|++|++||+++ ++++.. +.+|...|++++|+|+
T Consensus 159 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 237 (447)
T 3dw8_B 159 PMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPN 237 (447)
T ss_dssp EEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSS
T ss_pred chheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCC
Confidence 13 36799999999999999999998 799999999984 445542 5689999999999999
Q ss_pred C-CEEEEEeCCCeEEEEecCCCce----eeeccCCCc------------eeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 175 D-DIVVSASLDQTIRVWDISGLRK----KNVAPGMGK------------LVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 175 g-~~lvSgs~DgtI~IWD~~~~~~----~~~~~~~~~------------~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
+ .++++|+.||+|++||+++++. ...+.++.. .+.++... |--. .+++++. +.|++||
T Consensus 238 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~g~---~l~~~~~-~~v~iwd 312 (447)
T 3dw8_B 238 SCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFS-HSGR---YMMTRDY-LSVKVWD 312 (447)
T ss_dssp CTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEEC-TTSS---EEEEEES-SEEEEEE
T ss_pred CCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEEC-CCCC---EEEEeeC-CeEEEEe
Confidence 8 9999999999999999998876 566665543 44443321 1100 1556666 9999999
Q ss_pred CC--CcceeeecCCcc----------------eEEEEEcCCccEEEEecCCeEEEEEcCCCCeEec
Q psy9327 238 RK--MEPLCNIHENTR----------------VKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRT 285 (641)
Q Consensus 238 ~~--~~~~~~~~~~~~----------------I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~ 285 (641)
.+ ...+..+..... +.+++|+|+|.+|++++.++.+.+|+..++....
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 313 LNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp TTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred CCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee
Confidence 43 555555544332 3349999999999999999999999988776543
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-28 Score=268.05 Aligned_cols=279 Identities=19% Similarity=0.304 Sum_probs=233.9
Q ss_pred eeeccCCCCe-EEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 3 TKFETKSARV-KGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 3 ~~~~~H~~~V-~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
..+.+|.+.| .++.| +++++++|+.||+|++||+.+++.+..+.+|.++|.+++|+|++ .+++|+
T Consensus 115 ~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s----------- 180 (464)
T 3v7d_B 115 TTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGS----------- 180 (464)
T ss_dssp EEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEE-----------
T ss_pred EEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEe-----------
Confidence 4788999885 66665 56799999999999999999999999999999999999999988 888887
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEc--cCCCEEEEEeCCCeEEEEECCCCe-----
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH--HEYPWILSASDDQTIRIWYWQSRN----- 154 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fs--p~~~~l~sgs~Dg~I~vWd~~~~~----- 154 (641)
.||+|++||+++++++..+.+|.+.|.+++|+ ++++++++|+.|++|++||++++.
T Consensus 181 -----------------~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~ 243 (464)
T 3v7d_B 181 -----------------TDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDH 243 (464)
T ss_dssp -----------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC---
T ss_pred -----------------CCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccc
Confidence 99999999999999999999999999999999 577899999999999999998765
Q ss_pred ------------------eEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCC
Q psy9327 155 ------------------CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHP 216 (641)
Q Consensus 155 ------------------~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~ 216 (641)
.+..+.+|...|.++ ++++..+++|+.|++|++||+++++....+.+|...+.++.....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 321 (464)
T 3v7d_B 244 GEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHE 321 (464)
T ss_dssp ---CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETT
T ss_pred cccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCC
Confidence 356788999999887 567999999999999999999999999988888777766442211
Q ss_pred ceeeeeeeeeeCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe-cc----ccc
Q psy9327 217 IWKYCKPVKYCNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR-TL----DLP 289 (641)
Q Consensus 217 v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~-~~----d~p 289 (641)
...+++++.|+.|++|| .++..+..+. +...|.+++|+ +.++++++.|+.+.+|+..++... .. ...
T Consensus 322 ----~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~ 395 (464)
T 3v7d_B 322 ----RKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSA 395 (464)
T ss_dssp ----TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCC
T ss_pred ----CCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCCCcc
Confidence 01267888999999999 5566666664 47889999998 479999999999999998776432 11 122
Q ss_pred eEEEEEcCcEEEEEeCCCCeEEEEeCCcchhh
Q psy9327 290 IYITKIKGNQVYYLDRECSPHVLRIDPTEFKF 321 (641)
Q Consensus 290 ~~~~~~~g~~v~~~~~dg~i~v~~~~~~~~~~ 321 (641)
...+..++..+++++ ||.+++|++.+++...
T Consensus 396 ~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 396 ITTFYVSDNILVSGS-ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp EEEEEECSSEEEEEE-TTEEEEEETTTCCEEE
T ss_pred EEEEEeCCCEEEEec-CCeEEEEECCCCcEEe
Confidence 445677888888888 8999999999876653
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-29 Score=260.39 Aligned_cols=209 Identities=13% Similarity=0.163 Sum_probs=175.5
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC----cccccccccccCeEEEEEeC--CCCEEEEeceeeEE
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN----TLLEKFDEHEGPVRGICFHN--QQPIFVSGGKMIVM 75 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~----~~l~~~~~h~~~V~~i~fsp--~~~~l~sgs~~~~~ 75 (641)
...+.+|.+.|++++|+|++++|++|+.||.|++||+.++ +.+..+.+|.++|.+++|+| ++.+|++|+
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~----- 78 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASAS----- 78 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEE-----
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEc-----
Confidence 3567899999999999999999999999999999999876 45667788999999999999 699999998
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC---------eeEEEEccCCCCeEEEEEccC--CCEEEEEeCCCe
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR---------KCIFTLLGHLDYIRTTFFHHE--YPWILSASDDQT 144 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~---------~~~~~~~~h~~~V~~v~fsp~--~~~l~sgs~Dg~ 144 (641)
.|+.|++||++++ +++..+.+|.+.|.+++|+|+ +.++++++.|+.
T Consensus 79 -----------------------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~ 135 (351)
T 3f3f_A 79 -----------------------YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGI 135 (351)
T ss_dssp -----------------------TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCE
T ss_pred -----------------------CCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCc
Confidence 9999999999987 678889999999999999999 999999999999
Q ss_pred EEEEECCCCeeEEEEc-------------cCCCCEEEEEEecC---CCEEEEEeCCCeEEEEecCCCce--eeeccCCCc
Q psy9327 145 IRIWYWQSRNCICVLT-------------GHNHYVMCAQFHPT---DDIVVSASLDQTIRVWDISGLRK--KNVAPGMGK 206 (641)
Q Consensus 145 I~vWd~~~~~~i~~l~-------------~h~~~V~sl~fsp~---g~~lvSgs~DgtI~IWD~~~~~~--~~~~~~~~~ 206 (641)
|++||+++++++..+. +|...+.++.|+|+ +..+++++.|+.+.+|+...++. ...+.+|..
T Consensus 136 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 215 (351)
T 3f3f_A 136 LRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKS 215 (351)
T ss_dssp EEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCS
T ss_pred EEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCc
Confidence 9999998876443322 68889999999997 89999999999998888877765 566677777
Q ss_pred eeeecccCCCceeeeeeeeeeCCCeeEEEecC
Q psy9327 207 LVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 207 ~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~ 238 (641)
.+.++.....--.....+++++.|+.|++||.
T Consensus 216 ~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~ 247 (351)
T 3f3f_A 216 LIRSISWAPSIGRWYQLIATGCKDGRIRIFKI 247 (351)
T ss_dssp CEEEEEECCCSSCSSEEEEEEETTSCEEEEEE
T ss_pred ceeEEEECCCCCCcceEEEEEcCCCeEEEEeC
Confidence 77765432211000012778889999999993
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7.4e-29 Score=266.52 Aligned_cols=279 Identities=15% Similarity=0.152 Sum_probs=221.7
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
++.| ..+....|+|++++|++|+.||.|++||+.+++....+..|.++|.+++|+|++.+|++|+
T Consensus 94 ~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-------------- 158 (420)
T 3vl1_A 94 LKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSS-------------- 158 (420)
T ss_dssp SCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEE--------------
T ss_pred EecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEe--------------
Confidence 3444 4455567899999999999999999999999998888889999999999999999999998
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc---
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG--- 161 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~--- 161 (641)
.|++|++||+.+++.+..+.+|.+.|.+++|+|++.+|++|+.|++|++||+++++++..+..
T Consensus 159 --------------~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~ 224 (420)
T 3vl1_A 159 --------------QDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKEN 224 (420)
T ss_dssp --------------TTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTB
T ss_pred --------------CCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCC
Confidence 999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCEEEEE---------------------EecCCCEEEEEeCCCeEEEEecCCCceeeeccC-CCceeeecccCCCcee
Q psy9327 162 HNHYVMCAQ---------------------FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG-MGKLVLSMKSKHPIWK 219 (641)
Q Consensus 162 h~~~V~sl~---------------------fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~-~~~~v~s~~~~~~v~~ 219 (641)
|...|.+++ |+|++.++++|+.||.|++||+++++....+.. +...+.++..... -.
T Consensus 225 ~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~-~~ 303 (420)
T 3vl1_A 225 PHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGN-NA 303 (420)
T ss_dssp TTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSS-CT
T ss_pred CCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCC-CC
Confidence 444555555 578899999999999999999999887766653 4555555442211 00
Q ss_pred eeeeeeeeCCCeeEEEecCC-Cc-ceeeec--CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCC----eEeccccc--
Q psy9327 220 YCKPVKYCNPKHTLHICNRK-ME-PLCNIH--ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG----IIRTLDLP-- 289 (641)
Q Consensus 220 ~~~~l~s~~~d~~I~i~d~~-~~-~~~~~~--~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g----~I~~~d~p-- 289 (641)
..+++++.++.|++||.+ .. .+..+. +...+.++.|. ++.++++++.|+.+.+|+..+. .+.....+
T Consensus 304 --~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~ 380 (420)
T 3vl1_A 304 --NYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA-AGALFVSSGFDTSIKLDIISDPESERPAIEFETPTF 380 (420)
T ss_dssp --TEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE-TTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEE
T ss_pred --CEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC-CCCEEEEecCCccEEEEeccCCCCCccceeccCccE
Confidence 026788899999999943 32 244443 56778888665 6789999999999999985442 11111111
Q ss_pred ---------eEEEEEcCc---EEEEEeCCCCeEEEEeCC
Q psy9327 290 ---------IYITKIKGN---QVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 290 ---------~~~~~~~g~---~v~~~~~dg~i~v~~~~~ 316 (641)
...+..++. .+++.+.+|.+.+|++.+
T Consensus 381 ~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 381 LVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp ECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred EccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 223556666 788999999999998764
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.8e-29 Score=265.51 Aligned_cols=277 Identities=13% Similarity=0.132 Sum_probs=225.5
Q ss_pred ccCCCCeEEEEEccCCC-eEEEEeCCCcEEEEEC----ccCc------ccccccc----------cccCeEEEEEeCCCC
Q psy9327 6 ETKSARVKGLSFHPKRP-WILSSLHNGVIQLWDY----RMNT------LLEKFDE----------HEGPVRGICFHNQQP 64 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~-~Lasg~~dg~I~iWD~----~~~~------~l~~~~~----------h~~~V~~i~fsp~~~ 64 (641)
..|.+.|++++|+|+++ +|++|+.||.|++||+ .+++ ....+.. |.+.|.+++|+|++.
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 34569999999999999 9999999999999999 8777 3444433 688999999999999
Q ss_pred EEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCe
Q psy9327 65 IFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQT 144 (641)
Q Consensus 65 ~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~ 144 (641)
+|++|+ .|+.|++|| .+++.+..+.+|.+.|.+++|+|++++|++++.|+.
T Consensus 122 ~l~~~~----------------------------~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 172 (425)
T 1r5m_A 122 SIVTGV----------------------------ENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENV 172 (425)
T ss_dssp EEEEEE----------------------------TTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCC
T ss_pred EEEEEe----------------------------CCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCe
Confidence 999998 999999999 678889999999999999999999999999999999
Q ss_pred EEEEECCCCeeEEEEccCCCC---------------EEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceee
Q psy9327 145 IRIWYWQSRNCICVLTGHNHY---------------VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVL 209 (641)
Q Consensus 145 I~vWd~~~~~~i~~l~~h~~~---------------V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~ 209 (641)
|++||+.+++.+..+..|... +.+++|+|++ .+++++.|+.|++||+++++....+.++...+.
T Consensus 173 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~ 251 (425)
T 1r5m_A 173 TILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPIS 251 (425)
T ss_dssp EEEEETTTTEEEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEE
T ss_pred EEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceE
Confidence 999999999999999888877 9999999975 588999999999999999988888877776666
Q ss_pred ecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe-cc
Q psy9327 210 SMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR-TL 286 (641)
Q Consensus 210 s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~-~~ 286 (641)
++..... - ..+++++.++.|++|| ........+. +...|.+++|+|++ .+++++.++.+.+|+..++... .+
T Consensus 252 ~~~~~~~-~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~ 326 (425)
T 1r5m_A 252 VLEFNDT-N---KLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALS 326 (425)
T ss_dssp EEEEETT-T---TEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEEECCC-C---CEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEec
Confidence 5442211 0 1266778999999999 4455555554 57899999999999 9999999999999998776532 22
Q ss_pred ---ccceEE--EEEcCcEEEEEeCCCCeEEEEeCCc
Q psy9327 287 ---DLPIYI--TKIKGNQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 287 ---d~p~~~--~~~~g~~v~~~~~dg~i~v~~~~~~ 317 (641)
..++.. +..++..+++++.||.+++|++.+.
T Consensus 327 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 327 IVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKL 362 (425)
T ss_dssp ECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHH
T ss_pred ccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCC
Confidence 233333 4456889999999999999998753
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-28 Score=251.42 Aligned_cols=237 Identities=14% Similarity=0.164 Sum_probs=206.7
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc--ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT--LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~--~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
+|.+.|.+++|+|+++++++|+.||.|++||+.+++ ....+..|...|.+++|+|++.++++++
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-------------- 160 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCC-------------- 160 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEE--------------
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEe--------------
Confidence 799999999999999999999999999999999877 5667778999999999999999999998
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCC
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNH 164 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~ 164 (641)
.|+.|++||+++++.+..+.+|.+.|.+++|+|+++++++++.|+.|++||+++++.+..+. |..
T Consensus 161 --------------~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~ 225 (337)
T 1gxr_A 161 --------------SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTS 225 (337)
T ss_dssp --------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSS
T ss_pred --------------CCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCC
Confidence 99999999999999999999999999999999999999999999999999999999888775 788
Q ss_pred CEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcce
Q psy9327 165 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPL 243 (641)
Q Consensus 165 ~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~ 243 (641)
.+.+++|+|++..+++++.|+.|++||+++.+.. .+..+...+.++... |-- ..+++++.++.+++|| .....+
T Consensus 226 ~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~-~~~---~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 226 QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFA-YCG---KWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEEC-TTS---SEEEEEETTSEEEEEETTTCCEE
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEEC-CCC---CEEEEecCCCcEEEEECCCCeEE
Confidence 9999999999999999999999999999987654 344555555543322 111 1166778899999999 555566
Q ss_pred eeecCCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 244 CNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 244 ~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
....+...+.+++|+|++.++++++.++.+.+|+
T Consensus 301 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 301 FQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp EEEECSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred EEecCCCcEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 6666788999999999999999999888888885
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.3e-28 Score=261.15 Aligned_cols=276 Identities=21% Similarity=0.325 Sum_probs=234.7
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
...+.+|.+.|.. +++++|+++++|+.||+|++||+.+++.+..+.+|.++|.+++|+ +..+++|+
T Consensus 111 ~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~----------- 176 (445)
T 2ovr_B 111 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGS----------- 176 (445)
T ss_dssp CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEE-----------
T ss_pred eEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEe-----------
Confidence 3568899987643 355578999999999999999999999999999999999999998 56899987
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~ 161 (641)
.|++|++||+.+++.+.++.+|.+.|.+++|+ +..+++|+.|++|++||+.+++++..+.+
T Consensus 177 -----------------~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~ 237 (445)
T 2ovr_B 177 -----------------TDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMG 237 (445)
T ss_dssp -----------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEEC
T ss_pred -----------------CCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcC
Confidence 99999999999999999999999999999996 56799999999999999999999999999
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCC
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKM 240 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~ 240 (641)
|...|.++.| ++..+++|+.||+|++||+++++....+.++...+.++..... .+++++.|+.|++|| ...
T Consensus 238 ~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~------~l~~~~~d~~i~i~d~~~~ 309 (445)
T 2ovr_B 238 HVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI------HVVSGSLDTSIRVWDVETG 309 (445)
T ss_dssp CSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEECSS------EEEEEETTSCEEEEETTTC
T ss_pred CcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEECCC------EEEEEeCCCeEEEEECCCC
Confidence 9999999999 7889999999999999999999999988888777776554221 267788999999999 455
Q ss_pred cceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eeccc------cceEEEEEcCcEEEEEeCCCCeEEE
Q psy9327 241 EPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLD------LPIYITKIKGNQVYYLDRECSPHVL 312 (641)
Q Consensus 241 ~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d------~p~~~~~~~g~~v~~~~~dg~i~v~ 312 (641)
..+..+. +...+.+++++ +.++++++.++.+.+|+..++. +..+. .++.....++..+++++.||.+++|
T Consensus 310 ~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iw 387 (445)
T 2ovr_B 310 NCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 387 (445)
T ss_dssp CEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEE
T ss_pred CEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEE
Confidence 5555554 35677777775 5699999999999999987664 44433 3455566678999999999999999
Q ss_pred EeCCcchh
Q psy9327 313 RIDPTEFK 320 (641)
Q Consensus 313 ~~~~~~~~ 320 (641)
++.+++..
T Consensus 388 d~~~~~~~ 395 (445)
T 2ovr_B 388 DLKTGEFI 395 (445)
T ss_dssp ETTTCCEE
T ss_pred ECCCCcee
Confidence 99876644
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-28 Score=267.66 Aligned_cols=270 Identities=20% Similarity=0.288 Sum_probs=225.4
Q ss_pred ccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
.+|...|.+++| +++++++|+.||+|++||..+++.+..+.+|.++|.+++| ++.++++|+
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~--------------- 190 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGS--------------- 190 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEE---------------
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEc---------------
Confidence 356677998877 7899999999999999999999999999999999999999 788999998
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeE---EEEccC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI---CVLTGH 162 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i---~~l~~h 162 (641)
.||+|++||+.+++.+.++.+|.+.|.+++|++ ..+++|+.|++|++||+++++.. ..+.+|
T Consensus 191 -------------~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~ 255 (435)
T 1p22_A 191 -------------SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGH 255 (435)
T ss_dssp -------------TTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCC
T ss_pred -------------CCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCC
Confidence 999999999999999999999999999999974 58999999999999999987654 678899
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCc
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKME 241 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~ 241 (641)
...|.+++| ++..+++|+.||+|++||+++++....+.++...+.++..... .+++++.|+.|++|| ..+.
T Consensus 256 ~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~------~l~~g~~dg~i~iwd~~~~~ 327 (435)
T 1p22_A 256 RAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR------LVVSGSSDNTIRLWDIECGA 327 (435)
T ss_dssp SSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETT------EEEEEETTSCEEEEETTTCC
T ss_pred CCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCCC------EEEEEeCCCeEEEEECCCCC
Confidence 999999999 6899999999999999999999999998888777776554221 267888999999999 4566
Q ss_pred ceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCC----------eEecc---ccceEEEEEcCcEEEEEeCCC
Q psy9327 242 PLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG----------IIRTL---DLPIYITKIKGNQVYYLDREC 307 (641)
Q Consensus 242 ~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g----------~I~~~---d~p~~~~~~~g~~v~~~~~dg 307 (641)
.+..+. +...|.+++| ++.++++++.++.+.+|+...+ .+..+ ..++.....++..+++++.||
T Consensus 328 ~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg 405 (435)
T 1p22_A 328 CLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDD 405 (435)
T ss_dssp EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSS
T ss_pred EEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeCCCEEEEEeCCC
Confidence 666665 4778999999 5779999999999999985433 23322 233444445888999999999
Q ss_pred CeEEEEeCCcch
Q psy9327 308 SPHVLRIDPTEF 319 (641)
Q Consensus 308 ~i~v~~~~~~~~ 319 (641)
.+++|++.+..-
T Consensus 406 ~i~iwd~~~~~~ 417 (435)
T 1p22_A 406 TILIWDFLNDPA 417 (435)
T ss_dssp EEEEEC------
T ss_pred EEEEEECCCCCC
Confidence 999999987543
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.3e-28 Score=261.55 Aligned_cols=272 Identities=22% Similarity=0.359 Sum_probs=233.6
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+..+.+|.+.|.+++|+ ++++++|+.||+|++||+.+++.+..+.+|..+|.+++|+ +..+++|+
T Consensus 152 ~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s----------- 216 (445)
T 2ovr_B 152 LRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGS----------- 216 (445)
T ss_dssp EEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEE-----------
T ss_pred EEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEe-----------
Confidence 46788999999999998 5699999999999999999999999999999999999996 45788887
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~ 161 (641)
.|++|++||+.+++.+..+.+|.+.|.+++| ++.++++|+.|+.|++||+++++++..+.+
T Consensus 217 -----------------~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 277 (445)
T 2ovr_B 217 -----------------RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQG 277 (445)
T ss_dssp -----------------TTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECC
T ss_pred -----------------CCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecC
Confidence 9999999999999999999999999999999 678899999999999999999999999999
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCC
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKM 240 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~ 240 (641)
|...|.++.| ++..+++|+.|++|++||+++++....+.++...+.++..... .+++++.|+.|++|| .++
T Consensus 278 ~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~------~l~~~~~dg~i~vwd~~~~ 349 (445)
T 2ovr_B 278 HTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN------ILVSGNADSTVKIWDIKTG 349 (445)
T ss_dssp CSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETT------EEEEEETTSCEEEEETTTC
T ss_pred CCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCC------EEEEEeCCCeEEEEECCCC
Confidence 9999999999 7899999999999999999999999888887776665443222 267788999999999 456
Q ss_pred cceeeec----CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecc--------ccceEE--EEEcCcEEEEEeC
Q psy9327 241 EPLCNIH----ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTL--------DLPIYI--TKIKGNQVYYLDR 305 (641)
Q Consensus 241 ~~~~~~~----~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~--------d~p~~~--~~~~g~~v~~~~~ 305 (641)
..+..+. +...|.+++|+ +.++++++.++.+.+|+..++. ++.+ ..++.. +..++..+++++.
T Consensus 350 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~ 427 (445)
T 2ovr_B 350 QCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSR 427 (445)
T ss_dssp CEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECS
T ss_pred cEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEccc
Confidence 6666665 56789999997 4699999999999999987764 3333 122332 3456677889999
Q ss_pred CCC----eEEEEeCCc
Q psy9327 306 ECS----PHVLRIDPT 317 (641)
Q Consensus 306 dg~----i~v~~~~~~ 317 (641)
||. +.+|+++..
T Consensus 428 dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 428 NGTEETKLLVLDFDVD 443 (445)
T ss_dssp SSSSCCEEEEEECCCC
T ss_pred CCCCccEEEEEECCCC
Confidence 998 999998863
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7e-29 Score=260.23 Aligned_cols=239 Identities=13% Similarity=0.260 Sum_probs=196.9
Q ss_pred CCCCeEEEEEccC----CCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeC-CCCEEEEeceeeEEeeeceee
Q psy9327 8 KSARVKGLSFHPK----RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN-QQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 8 H~~~V~~l~fspd----g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp-~~~~l~sgs~~~~~~~~~~~~ 82 (641)
|.+.|.+++|+|+ +++|++|+.||.|++||+.+++.+..+..|..+|.+++|+| ++.+|++|+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~------------ 135 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVS------------ 135 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEE------------
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEe------------
Confidence 6688999999999 67999999999999999999999999999999999999999 899999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE---ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL---LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~---~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l 159 (641)
.|+.|++||+++++.+..+ .+|.+.|.+++|+|++.+|++|+.|+.|++||+++++....+
T Consensus 136 ----------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 199 (366)
T 3k26_A 136 ----------------KDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAI 199 (366)
T ss_dssp ----------------TTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHH
T ss_pred ----------------CCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCcccccc
Confidence 9999999999999999998 789999999999999999999999999999999987544333
Q ss_pred ----------------------------ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce--------------
Q psy9327 160 ----------------------------TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK-------------- 197 (641)
Q Consensus 160 ----------------------------~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~-------------- 197 (641)
.+|...|.+++|+ +.++++++.|+.|++||++++..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~ 277 (366)
T 3k26_A 200 KESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTI 277 (366)
T ss_dssp HHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEE
T ss_pred ceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchhe
Confidence 3499999999999 78999999999999999988754
Q ss_pred eeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC-Ccc----eeeecC---CcceEEEEEcCCccEEEEecC
Q psy9327 198 KNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK-MEP----LCNIHE---NTRVKSGAWDESGVFIYTTSN 269 (641)
Q Consensus 198 ~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~-~~~----~~~~~~---~~~I~sla~~p~g~~L~t~s~ 269 (641)
...+.++...+.++... |-. -...+++++.++.|++||.. ... ...+.. ...|.+++|+|++.+|++++.
T Consensus 278 ~~~~~~~~~~v~~~~~s-~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 355 (366)
T 3k26_A 278 LGRFDYSQCDIWYMRFS-MDF-WQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCD 355 (366)
T ss_dssp EEEEECSSCCSSCCCCE-ECT-TSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEET
T ss_pred eccccccCCcEEEEEEc-CCC-CCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeC
Confidence 33333333333322211 000 01126788899999999943 322 223332 589999999999999999999
Q ss_pred CeEEEEEcC
Q psy9327 270 HIKYAIVNG 278 (641)
Q Consensus 270 ~~k~~l~~~ 278 (641)
++.+.+|+.
T Consensus 356 dg~i~iwd~ 364 (366)
T 3k26_A 356 DASIWRWDR 364 (366)
T ss_dssp TSEEEEEEC
T ss_pred CCEEEEEEe
Confidence 999999874
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.96 E-value=6e-28 Score=250.97 Aligned_cols=247 Identities=18% Similarity=0.283 Sum_probs=207.7
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
++.+++|.+.|.+++|+|++++|++|+.||.|++|+...+........+...+..+.+++++.++++++
T Consensus 79 ~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s----------- 147 (340)
T 4aow_A 79 QRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGS----------- 147 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEE-----------
T ss_pred eEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeec-----------
Confidence 356889999999999999999999999999999999999888888888999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCee-EEEEccCCCCeEEEEEccCC--CEEEEEeCCCeEEEEECCCCeeEEE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC-IFTLLGHLDYIRTTFFHHEY--PWILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~-~~~~~~h~~~V~~v~fsp~~--~~l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
.|+.+++||...... .....+|.+.+..++|++++ .++++++.|+.|++||+++++++..
T Consensus 148 -----------------~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~ 210 (340)
T 4aow_A 148 -----------------RDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 210 (340)
T ss_dssp -----------------TTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEE
T ss_pred -----------------CCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeE
Confidence 999999999987654 34467799999999999864 5789999999999999999999999
Q ss_pred EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~ 238 (641)
+.+|.+.|++++|+|++++|++|+.|++|++||+++.+....+.++. .+.++.. +| ...+.+++.++.|++||.
T Consensus 211 ~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-~v~~~~~-~~----~~~~~~~~~d~~i~iwd~ 284 (340)
T 4aow_A 211 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCF-SP----NRYWLCAATGPSIKIWDL 284 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSS-CEEEEEE-CS----SSSEEEEEETTEEEEEET
T ss_pred ecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCc-eEEeeec-CC----CCceeeccCCCEEEEEEC
Confidence 99999999999999999999999999999999999998887776542 3333221 11 112556668999999994
Q ss_pred CC-cceeee----------cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe
Q psy9327 239 KM-EPLCNI----------HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI 282 (641)
Q Consensus 239 ~~-~~~~~~----------~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~ 282 (641)
+. ..+..+ .+...|.+++|+|+|.+|++|+.|+.+.+|+..+|+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 285 EGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp TTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred CCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 43 222222 246789999999999999999999999999876664
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.96 E-value=9.9e-29 Score=263.21 Aligned_cols=247 Identities=9% Similarity=0.080 Sum_probs=209.8
Q ss_pred ceeeccCCCCeEEEEEccC----C---CeEEEEeCCCcEEEEECccCcc-----ccccccc-----ccCeEEEEEe----
Q psy9327 2 LTKFETKSARVKGLSFHPK----R---PWILSSLHNGVIQLWDYRMNTL-----LEKFDEH-----EGPVRGICFH---- 60 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspd----g---~~Lasg~~dg~I~iWD~~~~~~-----l~~~~~h-----~~~V~~i~fs---- 60 (641)
+..+.+|.+.|.+++|+|+ + .+|++|+.||.|++||+.+++. +..+..| ...|.+++|+
T Consensus 55 ~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 134 (397)
T 1sq9_A 55 SYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASND 134 (397)
T ss_dssp EEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-
T ss_pred ceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccC
Confidence 4678899999999999999 9 9999999999999999999887 7888888 6999999999
Q ss_pred CCCCE-EEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC------CeeEE-----EE-------ccCC
Q psy9327 61 NQQPI-FVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ------RKCIF-----TL-------LGHL 121 (641)
Q Consensus 61 p~~~~-l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t------~~~~~-----~~-------~~h~ 121 (641)
|++.+ |++++ .|+.|++||+.+ ++.+. .+ ..|.
T Consensus 135 ~~~~~~l~~~~----------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (397)
T 1sq9_A 135 RLLSHRLVATD----------------------------VKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPS 186 (397)
T ss_dssp ---CEEEEEEE----------------------------TTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSC
T ss_pred CCCceEEEEEe----------------------------CCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCC
Confidence 99999 99997 999999999998 66655 67 4589
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc---C---CCCEEEEEEecCCCEEEEEeCC---CeEEEEec
Q psy9327 122 DYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG---H---NHYVMCAQFHPTDDIVVSASLD---QTIRVWDI 192 (641)
Q Consensus 122 ~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~---h---~~~V~sl~fsp~g~~lvSgs~D---gtI~IWD~ 192 (641)
..|.+++|+|++ ++++|+.|+.|++||+++++++..+.+ | ...|.+++|+|++.+|++++.| +.|++||+
T Consensus 187 ~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~ 265 (397)
T 1sq9_A 187 QFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYET 265 (397)
T ss_dssp CCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEET
T ss_pred CCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEEC
Confidence 999999999999 999999999999999999999999998 9 9999999999999999999999 99999999
Q ss_pred CCCceeeeccC-------------CCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeec-------C---
Q psy9327 193 SGLRKKNVAPG-------------MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIH-------E--- 248 (641)
Q Consensus 193 ~~~~~~~~~~~-------------~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~-------~--- 248 (641)
++++....+.+ +...+.++... |-- ..+++++.++.|++|| .....+..+. +
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 341 (397)
T 1sq9_A 266 EFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFN-DSG---ETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEED 341 (397)
T ss_dssp TTCCEEEEECBC--------CCBSBSSCEEEEEEC-SSS---SEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGG
T ss_pred CCCcccceeccCcccccccccccccCCcEEEEEEC-CCC---CEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhh
Confidence 99988888876 55555554322 111 1267888999999999 4566666665 3
Q ss_pred ------------CcceEEEEEcCCc----------cEEEEecCCeEEEEEcCCCC
Q psy9327 249 ------------NTRVKSGAWDESG----------VFIYTTSNHIKYAIVNGDHG 281 (641)
Q Consensus 249 ------------~~~I~sla~~p~g----------~~L~t~s~~~k~~l~~~~~g 281 (641)
...|.+++|+|+| .++++++.++.+.+|+.++|
T Consensus 342 ~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 342 ILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp CCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred hhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 6889999999998 78999998888888876554
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-29 Score=267.91 Aligned_cols=280 Identities=10% Similarity=0.159 Sum_probs=225.7
Q ss_pred CCCCeEEEEEccCCC-eEEEE----------eCCCcEEEEECccCc---ccccccccccCeEEEEEeCCCCEEEEeceee
Q psy9327 8 KSARVKGLSFHPKRP-WILSS----------LHNGVIQLWDYRMNT---LLEKFDEHEGPVRGICFHNQQPIFVSGGKMI 73 (641)
Q Consensus 8 H~~~V~~l~fspdg~-~Lasg----------~~dg~I~iWD~~~~~---~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~ 73 (641)
+..+|.+++|+|+++ ++++| +.||.|++||+.+++ .+..+ .|..+|.+++|+|++.+|++|+
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~--- 86 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGAL--- 86 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEE---
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEc---
Confidence 345789999999987 89999 889999999998875 33334 5899999999999999999998
Q ss_pred EEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC----CeeEEEEccCCCCeEEEEEccC-CCEEEEEeCCCeEEEE
Q psy9327 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ----RKCIFTLLGHLDYIRTTFFHHE-YPWILSASDDQTIRIW 148 (641)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t----~~~~~~~~~h~~~V~~v~fsp~-~~~l~sgs~Dg~I~vW 148 (641)
.|+.|++||+.+ .+.+..+.+|.+.|.+++|+|+ +.+|++++.|+.|++|
T Consensus 87 -------------------------~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw 141 (416)
T 2pm9_A 87 -------------------------DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIW 141 (416)
T ss_dssp -------------------------SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBC
T ss_pred -------------------------cCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEE
Confidence 899999999988 4588899999999999999998 8899999999999999
Q ss_pred ECCCCe------eEEE---EccCCCCEEEEEEecC-CCEEEEEeCCCeEEEEecCCCceeeeccCC------Cceeeecc
Q psy9327 149 YWQSRN------CICV---LTGHNHYVMCAQFHPT-DDIVVSASLDQTIRVWDISGLRKKNVAPGM------GKLVLSMK 212 (641)
Q Consensus 149 d~~~~~------~i~~---l~~h~~~V~sl~fsp~-g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~------~~~v~s~~ 212 (641)
|+.+++ .... +.+|...|.+++|+|+ +.++++++.|++|++||+++++....+..+ ...+.++.
T Consensus 142 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~ 221 (416)
T 2pm9_A 142 DMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVE 221 (416)
T ss_dssp BTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEE
T ss_pred ECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEE
Confidence 999876 3333 3679999999999999 789999999999999999999888777654 44455433
Q ss_pred cCCCceeeeeeeeeeCCCe---eEEEecCCC--cceeeec--CCcceEEEEEcC-CccEEEEecCCeEEEEEcCCCCe-E
Q psy9327 213 SKHPIWKYCKPVKYCNPKH---TLHICNRKM--EPLCNIH--ENTRVKSGAWDE-SGVFIYTTSNHIKYAIVNGDHGI-I 283 (641)
Q Consensus 213 ~~~~v~~~~~~l~s~~~d~---~I~i~d~~~--~~~~~~~--~~~~I~sla~~p-~g~~L~t~s~~~k~~l~~~~~g~-I 283 (641)
.. |-- ...+++++.++ .|++||.+. .....+. +...|.+++|+| ++.++++++.++.+.+|+.+++. +
T Consensus 222 ~~-~~~--~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 222 WH-PKN--STRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQL 298 (416)
T ss_dssp EC-SSC--TTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEE
T ss_pred EC-CCC--CCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccc
Confidence 22 110 01156677777 999999432 4555554 678999999999 89999999999999999987664 3
Q ss_pred ecc---ccceE--EEEEcC-cEEEEEeCCCCeEEEEeCCcch
Q psy9327 284 RTL---DLPIY--ITKIKG-NQVYYLDRECSPHVLRIDPTEF 319 (641)
Q Consensus 284 ~~~---d~p~~--~~~~~g-~~v~~~~~dg~i~v~~~~~~~~ 319 (641)
..+ ..++. .+..++ ..+++++.|+.+++|++.....
T Consensus 299 ~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 299 SQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp EEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred eeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 333 22222 244555 7899999999999999987543
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.96 E-value=7.5e-28 Score=271.08 Aligned_cols=279 Identities=12% Similarity=0.124 Sum_probs=238.5
Q ss_pred ccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC----cccccccccccC-eEEEEEeC--CCCEEEEeceeeEEeee
Q psy9327 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN----TLLEKFDEHEGP-VRGICFHN--QQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~----~~l~~~~~h~~~-V~~i~fsp--~~~~l~sgs~~~~~~~~ 78 (641)
..|.+.|.+++|+|+|++|++++ ++.|++||+.++ +....+.+|.+. |.+++|+| ++.+|++|+
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~-------- 85 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGD-------- 85 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEE--------
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEec--------
Confidence 36889999999999999999998 789999999998 888999999999 99999999 999999998
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCC--------eeEEEEccCCCCeEEEEEccCCCEEEEEeCC----CeEE
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR--------KCIFTLLGHLDYIRTTFFHHEYPWILSASDD----QTIR 146 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~--------~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D----g~I~ 146 (641)
.|+.|++||+.++ +....+..|.++|.+++|+|+++++++++.| +.|+
T Consensus 86 --------------------~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~ 145 (615)
T 1pgu_A 86 --------------------ESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFI 145 (615)
T ss_dssp --------------------TTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEE
T ss_pred --------------------CCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEE
Confidence 9999999999755 7788889999999999999999999999988 6888
Q ss_pred EEECCCCeeEEEEccCCCCEEEEEEecCCC-EEEEEeCCCeEEEEecCCCceeeeccCCCc---eeeecccCCCc-eeee
Q psy9327 147 IWYWQSRNCICVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKNVAPGMGK---LVLSMKSKHPI-WKYC 221 (641)
Q Consensus 147 vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~---~v~s~~~~~~v-~~~~ 221 (641)
+|| .++.+..+.+|...|.+++|+|+++ .+++++.|++|++||+.+++....+.+|.. .+.++... |- -
T Consensus 146 ~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--- 219 (615)
T 1pgu_A 146 SWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFS-PDSG--- 219 (615)
T ss_dssp ETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEEC-STTC---
T ss_pred EEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEEC-CCCC---
Confidence 887 6778889999999999999999997 899999999999999999999998888776 67664432 21 1
Q ss_pred eeeeeeCCCeeEEEec-CCCcceeee-----cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eeccccc-----
Q psy9327 222 KPVKYCNPKHTLHICN-RKMEPLCNI-----HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDLP----- 289 (641)
Q Consensus 222 ~~l~s~~~d~~I~i~d-~~~~~~~~~-----~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~p----- 289 (641)
..+++++.++.|++|| .....+..+ .+...|.+++|+ ++.++++++.++.+.+|+..++. +..+..+
T Consensus 220 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~ 298 (615)
T 1pgu_A 220 EFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLG 298 (615)
T ss_dssp CEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGG
T ss_pred CEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCccc
Confidence 1266778999999999 566777777 568899999999 99999999999999999988765 3333221
Q ss_pred ---eEEEEEcCcEEEEEeCCCCeEEEEeCCcchh
Q psy9327 290 ---IYITKIKGNQVYYLDRECSPHVLRIDPTEFK 320 (641)
Q Consensus 290 ---~~~~~~~g~~v~~~~~dg~i~v~~~~~~~~~ 320 (641)
......++..+++++.||.+++|++...+..
T Consensus 299 ~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~ 332 (615)
T 1pgu_A 299 NQQVGVVATGNGRIISLSLDGTLNFYELGHDEVL 332 (615)
T ss_dssp GCEEEEEEEETTEEEEEETTSCEEEEETTEEEEE
T ss_pred CceeEEEeCCCCeEEEEECCCCEEEEECCCCcEE
Confidence 2223348899999999999999998865443
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-28 Score=261.79 Aligned_cols=248 Identities=14% Similarity=0.146 Sum_probs=199.6
Q ss_pred eeeccCCCCeEEEEEcc-CCCeEEEEeCCCcEEEEECccC-------cccccccccccCeEEEEEeCCC-CEEEEeceee
Q psy9327 3 TKFETKSARVKGLSFHP-KRPWILSSLHNGVIQLWDYRMN-------TLLEKFDEHEGPVRGICFHNQQ-PIFVSGGKMI 73 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~~-------~~l~~~~~h~~~V~~i~fsp~~-~~l~sgs~~~ 73 (641)
..+.+|.+.|++++|+| ++++|++|+.||+|++||+.++ +.+..+.+|...|.+++|+|++ .++++++
T Consensus 75 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~--- 151 (402)
T 2aq5_A 75 PLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAG--- 151 (402)
T ss_dssp CCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEE---
T ss_pred ceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEc---
Confidence 45789999999999999 9999999999999999999887 5677888999999999999998 6899987
Q ss_pred EEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE--ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC
Q psy9327 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL--LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151 (641)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~--~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~ 151 (641)
.|+.|++||+++++.+..+ .+|.+.|.+++|+|++.+|++++.|+.|++||++
T Consensus 152 -------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 206 (402)
T 2aq5_A 152 -------------------------CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPR 206 (402)
T ss_dssp -------------------------TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETT
T ss_pred -------------------------CCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCC
Confidence 9999999999999999999 8899999999999999999999999999999999
Q ss_pred CCeeEEEE-ccCCCC-EEEEEEecCCCEEEEE---eCCCeEEEEecCCCce-eeecc-CCCceeeecccCCCceeeeeee
Q psy9327 152 SRNCICVL-TGHNHY-VMCAQFHPTDDIVVSA---SLDQTIRVWDISGLRK-KNVAP-GMGKLVLSMKSKHPIWKYCKPV 224 (641)
Q Consensus 152 ~~~~i~~l-~~h~~~-V~sl~fsp~g~~lvSg---s~DgtI~IWD~~~~~~-~~~~~-~~~~~v~s~~~~~~v~~~~~~l 224 (641)
+++++..+ .+|.+. +.++.|+|++.++++| +.|+.|++||+++++. ..... .+...+.++... |--. .-+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~--~l~ 283 (402)
T 2aq5_A 207 KGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFD-PDTN--IVY 283 (402)
T ss_dssp TTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEE-TTTT--EEE
T ss_pred CCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEc-CCCC--EEE
Confidence 99999998 788876 8999999999999999 7999999999988664 22221 222233322111 0000 013
Q ss_pred eeeCCCeeEEEecC-CCc----ceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE
Q psy9327 225 KYCNPKHTLHICNR-KME----PLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII 283 (641)
Q Consensus 225 ~s~~~d~~I~i~d~-~~~----~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I 283 (641)
.+++.|+.|++||. ... .+..+.+...+.+++|+|++.+++++ ++.+.+|...++.+
T Consensus 284 ~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~--~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 284 LCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNK--CEIARFYKLHERKC 345 (402)
T ss_dssp EEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGG--TEEEEEEEEETTEE
T ss_pred EEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccceec--ceeEEEEEcCCCcE
Confidence 45668999999993 333 23333456899999999999987653 44566666555443
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.9e-28 Score=257.47 Aligned_cols=241 Identities=15% Similarity=0.218 Sum_probs=196.2
Q ss_pred ccCCCCeEEEEEcc-CCCeEEEEeCCCcEEEEECccCcccccccc---cccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 6 ETKSARVKGLSFHP-KRPWILSSLHNGVIQLWDYRMNTLLEKFDE---HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 6 ~~H~~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~---h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.+|.+.|.+++|+| ++++|++|+.||.|++||+.. ..+..+.. |...|.+++|+|++.+|++|+
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------- 182 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGD----------- 182 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEE-----------
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEEC-----------
Confidence 47999999999999 789999999999999999985 44455543 458899999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCC----CeeE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQS----RNCI 156 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~----~~~i 156 (641)
.|+.|++||+ +++++..+.+|.+.|.+++|+|+++ ++++|+.|++|++||+++ +.++
T Consensus 183 -----------------~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 244 (383)
T 3ei3_B 183 -----------------STGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYI 244 (383)
T ss_dssp -----------------TTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEE
T ss_pred -----------------CCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceE
Confidence 9999999999 5788899999999999999999999 999999999999999987 6677
Q ss_pred EEEccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeee----c-ccCCC---ceeeee----e
Q psy9327 157 CVLTGHNHYVMCAQFHP-TDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLS----M-KSKHP---IWKYCK----P 223 (641)
Q Consensus 157 ~~l~~h~~~V~sl~fsp-~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s----~-~~~~~---v~~~~~----~ 223 (641)
..+ +|...|.+++|+| ++.+|++++.|++|++||+++++....+.++...... + ...+| +..+.+ .
T Consensus 245 ~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~ 323 (383)
T 3ei3_B 245 AEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQ 323 (383)
T ss_dssp EEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTT
T ss_pred EEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCcc
Confidence 777 6999999999999 9999999999999999999988876666543211110 0 01111 111111 1
Q ss_pred eeeeCCCeeEEEec-CCCcceeeec---CCcceEEEEEcCCccEEEEecCCeEEEEEcCC
Q psy9327 224 VKYCNPKHTLHICN-RKMEPLCNIH---ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 224 l~s~~~d~~I~i~d-~~~~~~~~~~---~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~ 279 (641)
+ +++.++.|++|| ..+..+..+. +...+..++|+|+|.+|++++ ++.+.+|+.+
T Consensus 324 ~-s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~ 381 (383)
T 3ei3_B 324 L-LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRE 381 (383)
T ss_dssp T-CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC
T ss_pred c-ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecC
Confidence 3 667899999999 5566666665 345677779999999999997 8889998764
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.6e-29 Score=275.89 Aligned_cols=280 Identities=9% Similarity=-0.011 Sum_probs=210.5
Q ss_pred eeccCCCCeEEEEEccC------CCeEEEEeCCCcEEEEECccCcc-----------cccccccccCeEEEEEeCCCCEE
Q psy9327 4 KFETKSARVKGLSFHPK------RPWILSSLHNGVIQLWDYRMNTL-----------LEKFDEHEGPVRGICFHNQQPIF 66 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspd------g~~Lasg~~dg~I~iWD~~~~~~-----------l~~~~~h~~~V~~i~fsp~~~~l 66 (641)
.+.+|.+.|.+++|+|+ +.+||+|+.||+|++||+.+++. ...+.+|.++|.+++|+|++ .|
T Consensus 202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~l 280 (524)
T 2j04_B 202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TV 280 (524)
T ss_dssp EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EE
T ss_pred EEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eE
Confidence 46778899999999997 57999999999999999976642 23567899999999999865 78
Q ss_pred EEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC-eeEEEEccCCCCeEEE--EEccCC-CEEEEEeCC
Q psy9327 67 VSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR-KCIFTLLGHLDYIRTT--FFHHEY-PWILSASDD 142 (641)
Q Consensus 67 ~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~-~~~~~~~~h~~~V~~v--~fsp~~-~~l~sgs~D 142 (641)
++|+ .||+|++||++++ .+...+.+|.++|+++ +|+|++ .+|+|||.|
T Consensus 281 asgs----------------------------~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D 332 (524)
T 2j04_B 281 VCGF----------------------------KNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD 332 (524)
T ss_dssp EEEE----------------------------TTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETT
T ss_pred EEEe----------------------------CCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccC
Confidence 8887 9999999999976 4566789999999999 577887 899999999
Q ss_pred CeEEEEECCCCeeEEEEccCCC--CEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceee
Q psy9327 143 QTIRIWYWQSRNCICVLTGHNH--YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKY 220 (641)
Q Consensus 143 g~I~vWd~~~~~~i~~l~~h~~--~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~ 220 (641)
++|++||+++++++.++.+|.. .|.+++|+|++..+++++.|++|++||++++.+..++.+|...|.++.. +|--.
T Consensus 333 ~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~-Sp~g~- 410 (524)
T 2j04_B 333 GYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGV-SRLHP- 410 (524)
T ss_dssp SEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEEC-CSSCC-
T ss_pred CeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEe-CCCCC-
Confidence 9999999999888777777764 5889999999999999999999999999999888888888888877543 33211
Q ss_pred eeeeeeeCCCeeEEEecCCCcceeee------cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEecc---ccce-
Q psy9327 221 CKPVKYCNPKHTLHICNRKMEPLCNI------HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTL---DLPI- 290 (641)
Q Consensus 221 ~~~l~s~~~d~~I~i~d~~~~~~~~~------~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~---d~p~- 290 (641)
.+++|+.|++|++||.....+... .....+.+++|+|+|..+. ...+.++..|......+..+ ..++
T Consensus 411 --~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~~~~~~~~~~~~g~~~~~l~gh~~~V~ 487 (524)
T 2j04_B 411 --MVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYR-IDSSYEVYPLTVNDVSKAKIDAHGINIT 487 (524)
T ss_dssp --BCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEE-ECCCCCCCC-------------CCCSCC
T ss_pred --eEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEE-ccCCceecccccCCcceeeecCCCceEE
Confidence 267899999999999544333221 1223578999999988543 23222222221111111111 1122
Q ss_pred -EEEEEcC---cEEEEEeCCCCeEEEEeCCc
Q psy9327 291 -YITKIKG---NQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 291 -~~~~~~g---~~v~~~~~dg~i~v~~~~~~ 317 (641)
..++.++ ..+.+++.+|.+++|+++-.
T Consensus 488 ~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 488 CTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp CEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred EEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 2344553 48999999999999998753
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=286.79 Aligned_cols=251 Identities=15% Similarity=0.221 Sum_probs=206.9
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECc--cCcccccccccccCeEEEEEeCC--CCEEEEeceeeEEe
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYR--MNTLLEKFDEHEGPVRGICFHNQ--QPIFVSGGKMIVMA 76 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~--~~~~l~~~~~h~~~V~~i~fsp~--~~~l~sgs~~~~~~ 76 (641)
|+..+++|.+.|++++|+|++++|++|+.||+|++||+. +++.+..+.+|.++|.+++|+|+ +.++++|+
T Consensus 1 ~~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s------ 74 (753)
T 3jro_A 1 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS------ 74 (753)
T ss_dssp -------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEE------
T ss_pred CeeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEe------
Confidence 567899999999999999999999999999999999998 56778888999999999999988 99999998
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe--eEEEEccCCCCeEEEEEccC--CCEEEEEeCCCeEEEEECCC
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK--CIFTLLGHLDYIRTTFFHHE--YPWILSASDDQTIRIWYWQS 152 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~--~~~~~~~h~~~V~~v~fsp~--~~~l~sgs~Dg~I~vWd~~~ 152 (641)
.||.|++||+.+++ .+..+.+|.++|.+++|+|+ +..+++|+.|++|++||+++
T Consensus 75 ----------------------~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~ 132 (753)
T 3jro_A 75 ----------------------YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKE 132 (753)
T ss_dssp ----------------------TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCS
T ss_pred ----------------------CCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeec
Confidence 99999999999987 77888999999999999999 99999999999999999988
Q ss_pred C--eeEEEEccCCCCEEEEEEec-------------CCCEEEEEeCCCeEEEEecCCC----ceeeeccCCCceeeeccc
Q psy9327 153 R--NCICVLTGHNHYVMCAQFHP-------------TDDIVVSASLDQTIRVWDISGL----RKKNVAPGMGKLVLSMKS 213 (641)
Q Consensus 153 ~--~~i~~l~~h~~~V~sl~fsp-------------~g~~lvSgs~DgtI~IWD~~~~----~~~~~~~~~~~~v~s~~~ 213 (641)
+ .....+.+|...|.+++|+| ++..+++|+.||+|++||++++ .....+.+|...+.++..
T Consensus 133 ~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~ 212 (753)
T 3jro_A 133 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 212 (753)
T ss_dssp SSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred CCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEe
Confidence 7 34556788999999999999 5899999999999999999877 445566777777777543
Q ss_pred CCCceeeeeeeeeeCCCeeEEEecCCCc-------ceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCC
Q psy9327 214 KHPIWKYCKPVKYCNPKHTLHICNRKME-------PLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 214 ~~~v~~~~~~l~s~~~d~~I~i~d~~~~-------~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~ 280 (641)
. |-......+++++.|+.|++||.... ......+...|.+++|+|+|.++++++.++.+.+|+...
T Consensus 213 s-p~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 213 S-PTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp C-CCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred c-cCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 3 21000112678889999999993321 112223467899999999999999999999999998764
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-27 Score=250.31 Aligned_cols=246 Identities=12% Similarity=0.130 Sum_probs=205.1
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+..+.+|.+.|.+++|+|++++|++++.||.|++||+.+++.+..+. |..+|.+++|+|++.++++++
T Consensus 67 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~----------- 134 (369)
T 3zwl_B 67 LGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAIL----------- 134 (369)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEE-----------
T ss_pred hhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEec-----------
Confidence 46788999999999999999999999999999999999999888886 899999999999999999997
Q ss_pred eecccCCcceeeEEEeeCC-----CeEEEEECCCCe-----------eEEEEccCCC--CeEEEEEccCCCEEEEEeCCC
Q psy9327 82 LESRNEPCLFRIKSVLGDD-----YKIKVWNYKQRK-----------CIFTLLGHLD--YIRTTFFHHEYPWILSASDDQ 143 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~D-----g~I~vWD~~t~~-----------~~~~~~~h~~--~V~~v~fsp~~~~l~sgs~Dg 143 (641)
.+ +.|++||+.++. ....+..|.+ .+.+++|+|+++++++++.|+
T Consensus 135 -----------------~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 197 (369)
T 3zwl_B 135 -----------------DNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDG 197 (369)
T ss_dssp -----------------CCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTS
T ss_pred -----------------CCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCC
Confidence 66 999999987653 3455666776 999999999999999999999
Q ss_pred eEEEEECCC-CeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeee
Q psy9327 144 TIRIWYWQS-RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCK 222 (641)
Q Consensus 144 ~I~vWd~~~-~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~ 222 (641)
.|++||+++ .+.+..+.+|...|.+++|+|++.+|++++.|+.|++||+++++....+.. ...+.++.. +|.-.
T Consensus 198 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~~~~~~-~~~~~--- 272 (369)
T 3zwl_B 198 KISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYET-DCPLNTAVI-TPLKE--- 272 (369)
T ss_dssp EEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-SSCEEEEEE-CSSSS---
T ss_pred EEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecC-CCCceeEEe-cCCCc---
Confidence 999999998 788999999999999999999999999999999999999999888777662 233332221 11111
Q ss_pred eeeeeCCCe--------------eEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCC
Q psy9327 223 PVKYCNPKH--------------TLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG 281 (641)
Q Consensus 223 ~l~s~~~d~--------------~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g 281 (641)
.++++..++ .+.+|| .....+..+. +...|.+++|+|+|.+|++++.|+.+.+|+.+.+
T Consensus 273 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 273 FIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp EEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHH
T ss_pred eEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccc
Confidence 033333333 799999 4455555554 4789999999999999999999999999986554
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.96 E-value=8.7e-28 Score=253.01 Aligned_cols=246 Identities=12% Similarity=0.058 Sum_probs=203.8
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccc--ccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK--FDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~--~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
+..+.+|.+.|.+++|+|++++|++|+.||.|++||+.+++.... +..|...|.+++|+|++.++++++
T Consensus 45 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------- 115 (372)
T 1k8k_C 45 VHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGS--------- 115 (372)
T ss_dssp EEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEE---------
T ss_pred eeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEe---------
Confidence 467889999999999999999999999999999999988864433 467999999999999999999998
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCee---EEE-EccCCCCeEEEEEccCCCEEEEEeCCCeEEEEEC-----
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC---IFT-LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYW----- 150 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~---~~~-~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~----- 150 (641)
.|+.|++||+++++. ... ..+|.+.|.+++|+|++.+|++|+.|+.|++||+
T Consensus 116 -------------------~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 176 (372)
T 1k8k_C 116 -------------------GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEV 176 (372)
T ss_dssp -------------------TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTT
T ss_pred -------------------CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccc
Confidence 999999999988762 333 3678999999999999999999999999999995
Q ss_pred -------------CCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCc
Q psy9327 151 -------------QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPI 217 (641)
Q Consensus 151 -------------~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v 217 (641)
..++++..+.+|...|.+++|+|++.+|++++.|++|++||+++++....+..+...+.++...
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--- 253 (372)
T 1k8k_C 177 EERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFI--- 253 (372)
T ss_dssp SCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEE---
T ss_pred cccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEe---
Confidence 4678899999999999999999999999999999999999999999888888776666554321
Q ss_pred eeeeeeeeeeCCCeeEEEecCCC--cce---------------------------------------eee--cCCcceEE
Q psy9327 218 WKYCKPVKYCNPKHTLHICNRKM--EPL---------------------------------------CNI--HENTRVKS 254 (641)
Q Consensus 218 ~~~~~~l~s~~~d~~I~i~d~~~--~~~---------------------------------------~~~--~~~~~I~s 254 (641)
....+..++.++.+.+|+... ..+ ..+ .+...|.+
T Consensus 254 --~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 331 (372)
T 1k8k_C 254 --TESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQ 331 (372)
T ss_dssp --ETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEE
T ss_pred --cCCCEEEEEeCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcce
Confidence 111133333899999999433 100 111 45779999
Q ss_pred EEEc-CCc---cEEEEecCCeEEEEEcCCC
Q psy9327 255 GAWD-ESG---VFIYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 255 la~~-p~g---~~L~t~s~~~k~~l~~~~~ 280 (641)
++|. ++| .++++++.|+.+.+|+.++
T Consensus 332 ~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 332 ISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp EEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred eEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 9976 666 9999999999999997544
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.96 E-value=7.6e-28 Score=250.72 Aligned_cols=268 Identities=9% Similarity=0.016 Sum_probs=214.3
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc---ccccccccccCeEEEEEeCCCC-EEEEeceeeEEeeec
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT---LLEKFDEHEGPVRGICFHNQQP-IFVSGGKMIVMAYQG 79 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~---~l~~~~~h~~~V~~i~fsp~~~-~l~sgs~~~~~~~~~ 79 (641)
...+|.+.|++++|+|++++|++|+.||.|++||+.+++ ....+..|..+|.+++|+|++. ++++|+
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--------- 76 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGT--------- 76 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEE---------
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEc---------
Confidence 346899999999999999999999999999999998876 2455568999999999999999 999998
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEEC-CCCeeEEEEcc--CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCC----
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNY-KQRKCIFTLLG--HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS---- 152 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~-~t~~~~~~~~~--h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~---- 152 (641)
.|+.|++||+ .+++. ..+.+ |.+.|.+++|+| +.++++++.|+.|++||+++
T Consensus 77 -------------------~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~ 135 (342)
T 1yfq_A 77 -------------------VQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDG 135 (342)
T ss_dssp -------------------TTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTB
T ss_pred -------------------CCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccc
Confidence 9999999999 87764 77888 999999999999 99999999999999999987
Q ss_pred -----CeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC-Ccee--eeccCCCceeeecccCCC-ceeeeee
Q psy9327 153 -----RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG-LRKK--NVAPGMGKLVLSMKSKHP-IWKYCKP 223 (641)
Q Consensus 153 -----~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~-~~~~--~~~~~~~~~v~s~~~~~~-v~~~~~~ 223 (641)
++++..+. |...|.+++|+|++ +++++.|+.|++||+++ +... .....+...+.++... | -- ..
T Consensus 136 ~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~~---~~ 208 (342)
T 1yfq_A 136 VIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALL-PKEQ---EG 208 (342)
T ss_dssp CEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEEC-SGGG---CE
T ss_pred cccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEEC-CCCC---CE
Confidence 77666666 89999999999887 99999999999999998 5432 2233344455543322 1 11 12
Q ss_pred eeeeCCCeeEEEecCCC-------cceeeecC-C---------cceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eec
Q psy9327 224 VKYCNPKHTLHICNRKM-------EPLCNIHE-N---------TRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRT 285 (641)
Q Consensus 224 l~s~~~d~~I~i~d~~~-------~~~~~~~~-~---------~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~ 285 (641)
+++++.++.+.+|+... .....+.. . ..|.+++|+|++.+|++++.++.+.+|+..++. +..
T Consensus 209 l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 288 (342)
T 1yfq_A 209 YACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKN 288 (342)
T ss_dssp EEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhh
Confidence 66778899999998322 44444432 2 389999999999999999999999999988775 334
Q ss_pred cc----cceEEEEEcCcEEEEEeCCCC
Q psy9327 286 LD----LPIYITKIKGNQVYYLDRECS 308 (641)
Q Consensus 286 ~d----~p~~~~~~~g~~v~~~~~dg~ 308 (641)
+. .++.....++..+++++.||.
T Consensus 289 ~~~~h~~~v~~~~~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 289 FAKFNEDSVVKIACSDNILCLATSDDT 315 (342)
T ss_dssp CCCCSSSEEEEEEECSSEEEEEEECTH
T ss_pred hhcccCCCceEecCCCCeEEEEecCCc
Confidence 33 233333366777888887776
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.4e-29 Score=268.77 Aligned_cols=251 Identities=17% Similarity=0.177 Sum_probs=191.1
Q ss_pred eeeccCCCCeEEEEEcc-CCCeEEEEeCCCcEEEEECccCcccccc--cccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 3 TKFETKSARVKGLSFHP-KRPWILSSLHNGVIQLWDYRMNTLLEKF--DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~~~~l~~~--~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
..+.+|.+.|++|+|+| ++.+|++|+.||+|++||++++...... ..+...+.+++|+|++.+|++|+
T Consensus 158 ~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~--------- 228 (435)
T 4e54_B 158 IKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGD--------- 228 (435)
T ss_dssp ECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEEC---------
T ss_pred EEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEe---------
Confidence 35678999999999998 6889999999999999999866433222 23455788999999999999998
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeeEE-
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCIC- 157 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~~i~- 157 (641)
.||.|++||++ ++.+.++.+|.+.|.+++|+|+++ ++++|+.|++|++||+++.+...
T Consensus 229 -------------------~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~ 288 (435)
T 4e54_B 229 -------------------NVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKAS 288 (435)
T ss_dssp -------------------SSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSC
T ss_pred -------------------CCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccce
Confidence 99999999986 456778899999999999999876 78899999999999998866433
Q ss_pred --EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCcee----eec-ccCCC---ceeeee-----
Q psy9327 158 --VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLV----LSM-KSKHP---IWKYCK----- 222 (641)
Q Consensus 158 --~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v----~s~-~~~~~---v~~~~~----- 222 (641)
...+|...|++++|+|+|.+|++++.||+|++||++++.....+..+.... ..+ ...+| ......
T Consensus 289 ~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 368 (435)
T 4e54_B 289 FLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPN 368 (435)
T ss_dssp CSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTT
T ss_pred EEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCC
Confidence 335799999999999999999999999999999999988776665442111 000 01111 111111
Q ss_pred -eeeeeCCCeeEEEec-CCCcceeee--cCCcceEEE-EEcCCccEEEEecCCeEEEEEcCCCCeE
Q psy9327 223 -PVKYCNPKHTLHICN-RKMEPLCNI--HENTRVKSG-AWDESGVFIYTTSNHIKYAIVNGDHGII 283 (641)
Q Consensus 223 -~l~s~~~d~~I~i~d-~~~~~~~~~--~~~~~I~sl-a~~p~g~~L~t~s~~~k~~l~~~~~g~I 283 (641)
.+.++..++.|++|| ..+..+..+ .+...|.++ +|+|+|.+|++|+ ++.+.+|+.++|..
T Consensus 369 ~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 369 FKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp SCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred eEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 023344567899999 455555554 346677776 6999999999876 66899998877643
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-27 Score=254.75 Aligned_cols=274 Identities=12% Similarity=0.153 Sum_probs=220.4
Q ss_pred eEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc--ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD--EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 12 V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~--~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
++.|+||++ ++||+|. |++|+|||..+|+.+..+. .|...|++++|+|++.+|++|+
T Consensus 108 ~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs------------------- 166 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT------------------- 166 (420)
T ss_dssp CBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE-------------------
T ss_pred ceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEE-------------------
Confidence 567999975 5777775 8999999999998776554 6788999999999999999998
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC-eeEEEEccCCCCEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMC 168 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~-~~i~~l~~h~~~V~s 168 (641)
.|++|++||+++++++..+.+|...+.+++++ +..+++|+.|+.+++||.... ..+.++.+|...+..
T Consensus 167 ---------~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~ 235 (420)
T 4gga_A 167 ---------SSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCG 235 (420)
T ss_dssp ---------TTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEE
T ss_pred ---------CCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceee
Confidence 99999999999999999999999999988775 578999999999999999864 466788999999999
Q ss_pred EEEecCCCEEEEEeCCCeEEEEecCCCcee----eeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcce
Q psy9327 169 AQFHPTDDIVVSASLDQTIRVWDISGLRKK----NVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPL 243 (641)
Q Consensus 169 l~fsp~g~~lvSgs~DgtI~IWD~~~~~~~----~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~ 243 (641)
+.|+|++..+++++.|+.+++||..+++.. .....+...|.++.. +|.-.......+|+.|+.|++|| .++...
T Consensus 236 ~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~-~p~~~~~la~~~gs~D~~I~iwd~~t~~~~ 314 (420)
T 4gga_A 236 LRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAW-CPWQSNVLATGGGTSDRHIRIWNVCSGACL 314 (420)
T ss_dssp EEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEE-CTTCTTEEEEEECTTTCEEEEEETTTTEEE
T ss_pred eeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeee-CCCcccEEEEEeecCCCEEEEEeCCccccc
Confidence 999999999999999999999999876532 333444445544321 12111111234567899999999 667777
Q ss_pred eeecCCcceEEEEEcCCccEEEEec--CCeEEEEEcCCCCe-Eeccc---cceEE--EEEcCcEEEEEeCCCCeEEEEeC
Q psy9327 244 CNIHENTRVKSGAWDESGVFIYTTS--NHIKYAIVNGDHGI-IRTLD---LPIYI--TKIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 244 ~~~~~~~~I~sla~~p~g~~L~t~s--~~~k~~l~~~~~g~-I~~~d---~p~~~--~~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
..+.....+.++.|++++..+++++ .++.+.+|+..++. +..+. .++.. +..+|..|++++.|+++++|++.
T Consensus 315 ~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 315 SAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred eeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 7888888999999999999888765 78999999877654 33432 23333 44678999999999999999987
Q ss_pred Ccc
Q psy9327 316 PTE 318 (641)
Q Consensus 316 ~~~ 318 (641)
+..
T Consensus 395 ~~~ 397 (420)
T 4gga_A 395 ELD 397 (420)
T ss_dssp CSS
T ss_pred CCC
Confidence 643
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=261.50 Aligned_cols=202 Identities=11% Similarity=0.056 Sum_probs=163.1
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc---ccccccccccCeEEEEEeCCCCEEEEeceeeEEeee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT---LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~---~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~ 78 (641)
+..+.+|.+.|.+++|+|++++|++|+.||+|++||+.+++ ....+..|..+|.+++|+|++.+|++++
T Consensus 48 ~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------- 119 (377)
T 3dwl_C 48 ARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGS-------- 119 (377)
T ss_dssp CCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEE--------
T ss_pred EEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEe--------
Confidence 45788999999999999999999999999999999999877 5666778999999999999999999998
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCe---eEEEEcc-CCCCeEEEEEccCCCEEEEEeCCCeEEEEECC---
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK---CIFTLLG-HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ--- 151 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~---~~~~~~~-h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~--- 151 (641)
.|+.|++||+++++ ....+.+ |.+.|.+++|+|++.+|++|+.|++|++||+.
T Consensus 120 --------------------~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 179 (377)
T 3dwl_C 120 --------------------GARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRD 179 (377)
T ss_dssp --------------------SSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSS
T ss_pred --------------------cCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecc
Confidence 99999999999887 4778888 99999999999999999999999999999985
Q ss_pred ---------------CCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce----eeeccCCCceeeecc
Q psy9327 152 ---------------SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK----KNVAPGMGKLVLSMK 212 (641)
Q Consensus 152 ---------------~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~----~~~~~~~~~~v~s~~ 212 (641)
.++++..+ +|...|++++|+|++.+|++++.|++|++||+++++. ...+.+|...+.++.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 258 (377)
T 3dwl_C 180 VDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLL 258 (377)
T ss_dssp CC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEE
T ss_pred cCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEE
Confidence 35677777 8999999999999999999999999999999999887 677777766666543
Q ss_pred cCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 213 SKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 213 ~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
.. |-- ..+++++.++.+ +|+
T Consensus 259 ~s-~~~---~~l~~~~~~~~~-~~~ 278 (377)
T 3dwl_C 259 WA-NES---AIVAAGYNYSPI-LLQ 278 (377)
T ss_dssp EE-ETT---EEEEEESSSSEE-EEC
T ss_pred Ec-CCC---CEEEEEcCCcEE-EEE
Confidence 21 110 114556555555 666
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.9e-27 Score=239.42 Aligned_cols=272 Identities=13% Similarity=0.146 Sum_probs=214.7
Q ss_pred eEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc--ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD--EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 12 V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~--~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
.++|+||+++ +||+| .|++|+|||+.+++.+..+. .|...|.+++|+|+++++++|+
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs------------------- 86 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT------------------- 86 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE-------------------
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEE-------------------
Confidence 4679999986 66666 58999999999998877664 6788999999999999999998
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC-eeEEEEccCCCCEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMC 168 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~-~~i~~l~~h~~~V~s 168 (641)
.|++|++||+++++++..+.+|...+.++.+ ++..+++|+.++.+++|+.... ..+..+.+|...+.+
T Consensus 87 ---------~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (318)
T 4ggc_A 87 ---------SSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCG 155 (318)
T ss_dssp ---------TTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEE
T ss_pred ---------CCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEE
Confidence 9999999999999999999999999876655 5678999999999999998865 466788999999999
Q ss_pred EEEecCCCEEEEEeCCCeEEEEecCCCceeee----ccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC-CCcce
Q psy9327 169 AQFHPTDDIVVSASLDQTIRVWDISGLRKKNV----APGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR-KMEPL 243 (641)
Q Consensus 169 l~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~----~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~-~~~~~ 243 (641)
+.|++++..+++++.|++|++||+++++.... ...+...+.++.. .|.-.....+.+++.++.|++||. .....
T Consensus 156 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~ 234 (318)
T 4ggc_A 156 LRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAW-CPWQSNVLATGGGTSDRHIRIWNVCSGACL 234 (318)
T ss_dssp EEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEE-CTTSTTEEEEEECTTTCEEEEEETTTCCEE
T ss_pred EEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEe-cCCCCcEEEEEecCCCCEEEEEeccccccc
Confidence 99999999999999999999999988664322 2223333333221 111111122457788999999994 44555
Q ss_pred eeecCCcceEEEEEcCCccEEEEec--CCeEEEEEcCCCCe-Eeccc---cceEE--EEEcCcEEEEEeCCCCeEEEEeC
Q psy9327 244 CNIHENTRVKSGAWDESGVFIYTTS--NHIKYAIVNGDHGI-IRTLD---LPIYI--TKIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 244 ~~~~~~~~I~sla~~p~g~~L~t~s--~~~k~~l~~~~~g~-I~~~d---~p~~~--~~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
........+..++|+|++..+++++ .++.+.+|+..++. +..+. .++.. +..++..+++++.||.+++|++.
T Consensus 235 ~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 235 SAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred ccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 5566688899999999988887654 78999999977664 44442 23333 44578899999999999999886
Q ss_pred C
Q psy9327 316 P 316 (641)
Q Consensus 316 ~ 316 (641)
+
T Consensus 315 ~ 315 (318)
T 4ggc_A 315 E 315 (318)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-27 Score=289.94 Aligned_cols=290 Identities=19% Similarity=0.336 Sum_probs=231.5
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeC--CCCEEEEeceeeEEeeec
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN--QQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp--~~~~l~sgs~~~~~~~~~ 79 (641)
+.++.+|.+.|.+++|+|+++++++|+.||+|++||+.+++.+..+.+|.++|.+++|+| ++.++++|+
T Consensus 650 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~--------- 720 (1249)
T 3sfz_A 650 LLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGS--------- 720 (1249)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEE---------
T ss_pred EEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEe---------
Confidence 467889999999999999999999999999999999999999999999999999999999 556888887
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l 159 (641)
.|+.|++||+.+++++.++.+|.+.|.+++|+|+++++++|+.|++|++||+++++....+
T Consensus 721 -------------------~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~ 781 (1249)
T 3sfz_A 721 -------------------NDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSI 781 (1249)
T ss_dssp -------------------TTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEE
T ss_pred -------------------CCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCccccee
Confidence 9999999999999999999999999999999999999999999999999999876544332
Q ss_pred -------------------------------------------------------ccCCCCEEEEEEecCCCEEEEEeCC
Q psy9327 160 -------------------------------------------------------TGHNHYVMCAQFHPTDDIVVSASLD 184 (641)
Q Consensus 160 -------------------------------------------------------~~h~~~V~sl~fsp~g~~lvSgs~D 184 (641)
.+|...|.+++|+|++.++++++.|
T Consensus 782 ~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d 861 (1249)
T 3sfz_A 782 NVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQ 861 (1249)
T ss_dssp ECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSS
T ss_pred cccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCC
Confidence 2788899999999999999999999
Q ss_pred CeEEEEecCCCceeeeccCCCceeeecccCCC--------------ceee------------------------------
Q psy9327 185 QTIRVWDISGLRKKNVAPGMGKLVLSMKSKHP--------------IWKY------------------------------ 220 (641)
Q Consensus 185 gtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~--------------v~~~------------------------------ 220 (641)
|+|++||+.++.....+.+|...+.++..... +|+.
T Consensus 862 g~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1249)
T 3sfz_A 862 YCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVD 941 (1249)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEE
T ss_pred CeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEec
Confidence 99999999999988888887666655332110 1110
Q ss_pred --------------------------ee-----eeeeeCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEe
Q psy9327 221 --------------------------CK-----PVKYCNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTT 267 (641)
Q Consensus 221 --------------------------~~-----~l~s~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~ 267 (641)
++ .+++++.++.+.+|| ........+. +...|.+++|+|+|.+++++
T Consensus 942 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~ 1021 (1249)
T 3sfz_A 942 NIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISS 1021 (1249)
T ss_dssp SSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEE
T ss_pred CCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEE
Confidence 00 034555666777777 3333333332 46678888888888888888
Q ss_pred cCCeEEEEEcCCCCeEeccc---cceEE-EEEcCcEEEEEeCCCCeEEEEeCCcch
Q psy9327 268 SNHIKYAIVNGDHGIIRTLD---LPIYI-TKIKGNQVYYLDRECSPHVLRIDPTEF 319 (641)
Q Consensus 268 s~~~k~~l~~~~~g~I~~~d---~p~~~-~~~~g~~v~~~~~dg~i~v~~~~~~~~ 319 (641)
+.++.+.+|+..++...... .++.. ....+..+++++.||.+++|++.+++.
T Consensus 1022 ~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~ 1077 (1249)
T 3sfz_A 1022 SEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRI 1077 (1249)
T ss_dssp CSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCC
T ss_pred cCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCce
Confidence 88888888887777654321 12222 122356788888999999998876553
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.96 E-value=9.4e-28 Score=257.53 Aligned_cols=274 Identities=14% Similarity=0.149 Sum_probs=212.7
Q ss_pred CeEEEEEccCCCeEE-EEeCCCcEEEEECccC----cccccccccccCeEEEEEeC-CCCEEEEeceeeEEeeeceeeec
Q psy9327 11 RVKGLSFHPKRPWIL-SSLHNGVIQLWDYRMN----TLLEKFDEHEGPVRGICFHN-QQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 11 ~V~~l~fspdg~~La-sg~~dg~I~iWD~~~~----~~l~~~~~h~~~V~~i~fsp-~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
....++++|+...++ +|+.||.|++||+... +.+..+.+|.++|.+++|+| ++.+|++|+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s-------------- 101 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGS-------------- 101 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEE--------------
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEe--------------
Confidence 345688998876444 5788999999998654 34556778999999999999 899999998
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCC-------eeEEEEccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEECCCCeeE
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQR-------KCIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRNCI 156 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~-------~~~~~~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~I~vWd~~~~~~i 156 (641)
.||+|++||+.++ +++..+.+|.+.|.+++|+|++ .+|++|+.|++|++||+++++++
T Consensus 102 --------------~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 167 (402)
T 2aq5_A 102 --------------EDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAV 167 (402)
T ss_dssp --------------TTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEE
T ss_pred --------------CCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCcc
Confidence 9999999999988 6788999999999999999998 69999999999999999999999
Q ss_pred EEE--ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeec-cCCCce-eeecccCCCceeeeeeeeee---CC
Q psy9327 157 CVL--TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA-PGMGKL-VLSMKSKHPIWKYCKPVKYC---NP 229 (641)
Q Consensus 157 ~~l--~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~-~~~~~~-v~s~~~~~~v~~~~~~l~s~---~~ 229 (641)
..+ .+|.+.|.+++|+|++..|++++.|++|++||+++++....+ .++... +.++.. +|--. .++++ +.
T Consensus 168 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~l~~g~~~~~ 243 (402)
T 2aq5_A 168 LTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVF-VSEGK---ILTTGFSRMS 243 (402)
T ss_dssp EEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEE-CSTTE---EEEEEECTTC
T ss_pred EEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEE-cCCCc---EEEEeccCCC
Confidence 999 899999999999999999999999999999999999888777 555432 332221 11111 14555 68
Q ss_pred CeeEEEecCC-Ccc---eeeecCCcceEEEEEcCCccEEE-EecCCeEEEEEcCCCCe--Eecc---c--cceEE--EEE
Q psy9327 230 KHTLHICNRK-MEP---LCNIHENTRVKSGAWDESGVFIY-TTSNHIKYAIVNGDHGI--IRTL---D--LPIYI--TKI 295 (641)
Q Consensus 230 d~~I~i~d~~-~~~---~~~~~~~~~I~sla~~p~g~~L~-t~s~~~k~~l~~~~~g~--I~~~---d--~p~~~--~~~ 295 (641)
++.|.+||.+ ... .....+...+.+++|+|++.+++ +++.++.+.+|+..++. +..+ . .++.. +..
T Consensus 244 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp 323 (402)
T 2aq5_A 244 ERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMP 323 (402)
T ss_dssp CEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECC
T ss_pred CceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEec
Confidence 9999999943 222 33344577899999999999997 55579999999877654 3322 1 22222 223
Q ss_pred cCcEEEEEeCCCCeEEEEeCCcc
Q psy9327 296 KGNQVYYLDRECSPHVLRIDPTE 318 (641)
Q Consensus 296 ~g~~v~~~~~dg~i~v~~~~~~~ 318 (641)
++..+ ++.++.+++|++.+..
T Consensus 324 ~~~~~--~s~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 324 KRGLE--VNKCEIARFYKLHERK 344 (402)
T ss_dssp GGGSC--GGGTEEEEEEEEETTE
T ss_pred ccccc--eecceeEEEEEcCCCc
Confidence 33333 3466688999888644
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-27 Score=252.75 Aligned_cols=241 Identities=20% Similarity=0.279 Sum_probs=201.9
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
|.+.|.+++|+|++++|++|+.||.|++||+.+++.+..+..|...|.+++|+ +..+++|+
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~----------------- 193 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGS----------------- 193 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEE-----------------
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEc-----------------
Confidence 88999999999999999999999999999999999999999999999999994 56899987
Q ss_pred CcceeeEEEeeCCCeEEEEECC-CCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCE
Q psy9327 88 PCLFRIKSVLGDDYKIKVWNYK-QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYV 166 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg~I~vWD~~-t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V 166 (641)
.|+.|++||++ .+..+..+.+|.+.|.+++|+|++++|++|+.|+.|++||+++++++..+.+|...|
T Consensus 194 -----------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v 262 (401)
T 4aez_A 194 -----------RSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAV 262 (401)
T ss_dssp -----------TTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCC
T ss_pred -----------CCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceE
Confidence 99999999999 567788899999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCC-CEEEEEe--CCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeee--eCCCeeEEEecCCC-
Q psy9327 167 MCAQFHPTD-DIVVSAS--LDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKY--CNPKHTLHICNRKM- 240 (641)
Q Consensus 167 ~sl~fsp~g-~~lvSgs--~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s--~~~d~~I~i~d~~~- 240 (641)
.+++|+|++ .++++++ .|+.|++||+++++....+.. +..+.++.. +|-.. .+++ |..++.+.+||...
T Consensus 263 ~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~-~~~v~~~~~-s~~~~---~l~~~~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 263 KAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA-GSQVTSLIW-SPHSK---EIMSTHGFPDNNLSIWSYSSS 337 (401)
T ss_dssp CEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC-SSCEEEEEE-CSSSS---EEEEEECTTTCEEEEEEEETT
T ss_pred EEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC-CCcEEEEEE-CCCCC---eEEEEeecCCCcEEEEecCCc
Confidence 999999976 5666765 799999999999888777753 334443322 11111 1333 56899999999332
Q ss_pred --cceeee-cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE
Q psy9327 241 --EPLCNI-HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII 283 (641)
Q Consensus 241 --~~~~~~-~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I 283 (641)
.....+ .+...|.+++|+|+|.++++++.++.+.+|+..++..
T Consensus 338 ~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 338 GLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp EEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC---
T ss_pred cceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcc
Confidence 222222 3578899999999999999999999999999876653
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-27 Score=248.36 Aligned_cols=278 Identities=15% Similarity=0.224 Sum_probs=213.5
Q ss_pred ceeeccCCCCeEEEEEccC---CCeEEEEeCCCcEEEEECcc-Cccc-ccccccccCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 2 LTKFETKSARVKGLSFHPK---RPWILSSLHNGVIQLWDYRM-NTLL-EKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspd---g~~Lasg~~dg~I~iWD~~~-~~~l-~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
+..+++|.+.|++++|+|+ |++|++|+.||.|++||+.+ +..+ ..+..|.++|.+++|+|++.+|++++
T Consensus 32 ~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~------ 105 (368)
T 3mmy_A 32 IEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS------ 105 (368)
T ss_dssp EECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEE------
T ss_pred eEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEc------
Confidence 4567899999999999999 69999999999999999987 5444 67888999999999999999999998
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEE--ccCCCEEEEEeCCCeEEEEECCCCe
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF--HHEYPWILSASDDQTIRIWYWQSRN 154 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~f--sp~~~~l~sgs~Dg~I~vWd~~~~~ 154 (641)
.|+.|++||+++++.+. +.+|.+.|.+++| +|++.+|++|+.|+.|++||+++++
T Consensus 106 ----------------------~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 106 ----------------------CDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp ----------------------TTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred ----------------------CCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 99999999999998776 5569999999999 8899999999999999999999999
Q ss_pred eEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC----CCceeeecccCCCceeeeeeeeeeCCC
Q psy9327 155 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----MGKLVLSMKSKHPIWKYCKPVKYCNPK 230 (641)
Q Consensus 155 ~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~----~~~~v~s~~~~~~v~~~~~~l~s~~~d 230 (641)
++..+..|. .+.++.+. +..+++++.|+.+++||++.......... +.....++..... +.. ..+++++.+
T Consensus 163 ~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~d 237 (368)
T 3mmy_A 163 PMMVLQLPE-RCYCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQ-NKP-TGFALGSIE 237 (368)
T ss_dssp CSEEEECSS-CEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTT-SCE-EEEEEEETT
T ss_pred EEEEEecCC-CceEEEec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCC-CCC-CeEEEecCC
Confidence 998888664 56666665 56889999999999999987644332211 1111111111111 000 116788899
Q ss_pred eeEEEecCCC----cceeeecCCc-------------ceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eeccc---cc
Q psy9327 231 HTLHICNRKM----EPLCNIHENT-------------RVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLD---LP 289 (641)
Q Consensus 231 ~~I~i~d~~~----~~~~~~~~~~-------------~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d---~p 289 (641)
+.+++||.+. .....+.... .|.+++|+|++.+|++++.++.+.+|+.+++. +..+. .+
T Consensus 238 g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 317 (368)
T 3mmy_A 238 GRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQP 317 (368)
T ss_dssp SEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSC
T ss_pred CcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCC
Confidence 9999999443 2333333322 69999999999999999999999999988775 33432 22
Q ss_pred eEE--EEEcCcEEEEEeCCCCeEEEE
Q psy9327 290 IYI--TKIKGNQVYYLDRECSPHVLR 313 (641)
Q Consensus 290 ~~~--~~~~g~~v~~~~~dg~i~v~~ 313 (641)
+.. +..++..+++++.|+..+.|.
T Consensus 318 v~~~~~s~~g~~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 318 ISACCFNHNGNIFAYASSYDWSKGHE 343 (368)
T ss_dssp EEEEEECTTSSCEEEEECCCSTTCGG
T ss_pred ceEEEECCCCCeEEEEeccccccccc
Confidence 322 445677777777776544443
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6e-27 Score=253.21 Aligned_cols=244 Identities=15% Similarity=0.232 Sum_probs=202.0
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
.+++|.+.|++++|+|+|++|++|+.||+|++||+.+++.+..+.+|...|.+++|+ +..+++|+
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs------------- 206 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGS------------- 206 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEE-------------
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEe-------------
Confidence 456788999999999999999999999999999999999999999999999998875 56888887
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCC-eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe----eEEE
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN----CICV 158 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~-~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~----~i~~ 158 (641)
.|+.+++||.... ..+.++.+|...+..+.|+|++.++++++.|+.|++||..+++ .+..
T Consensus 207 ---------------~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~ 271 (420)
T 4gga_A 207 ---------------RSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQT 271 (420)
T ss_dssp ---------------TTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEE
T ss_pred ---------------CCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeee
Confidence 9999999998864 5677889999999999999999999999999999999998765 4567
Q ss_pred EccCCCCEEEEEEecCC-CEEEE--EeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEE
Q psy9327 159 LTGHNHYVMCAQFHPTD-DIVVS--ASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHI 235 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g-~~lvS--gs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i 235 (641)
...|...|.+++|+|.+ ..+++ |+.|++|++||+.+++....+..+.. +.++.....--.+ -..++..++.|++
T Consensus 272 ~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~-v~~~~~~~~~~~l--v~~sg~~d~~I~i 348 (420)
T 4gga_A 272 FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ-VCSILWSPHYKEL--ISGHGFAQNQLVI 348 (420)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSC-EEEEEEETTTTEE--EEEECTTTCCEEE
T ss_pred ecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccc-eeeeeecCCCCeE--EEEEecCCCEEEE
Confidence 78899999999999975 45555 45799999999999998887765433 2222211110000 0234558999999
Q ss_pred ec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCC
Q psy9327 236 CN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 236 ~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~ 280 (641)
|| .++.++..+. |...|.+++|+|+|.+|++++.|+.+.+|+..+
T Consensus 349 wd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 349 WKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 99 5677777765 578999999999999999999999999998543
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-27 Score=249.00 Aligned_cols=243 Identities=15% Similarity=0.193 Sum_probs=200.9
Q ss_pred ccCCCCeEEEEEccC---CCeEEEEeCCCcEEEEECccCc-ccccccccccCeEEEEE------eCCCCEEEEeceeeEE
Q psy9327 6 ETKSARVKGLSFHPK---RPWILSSLHNGVIQLWDYRMNT-LLEKFDEHEGPVRGICF------HNQQPIFVSGGKMIVM 75 (641)
Q Consensus 6 ~~H~~~V~~l~fspd---g~~Lasg~~dg~I~iWD~~~~~-~l~~~~~h~~~V~~i~f------sp~~~~l~sgs~~~~~ 75 (641)
.+|.+.|.+++|+|+ +.+|++|+.||.|++||+.+++ .+..+..|.+.|.+++| +|++++|++++
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~----- 136 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGS----- 136 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEE-----
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEe-----
Confidence 378999999999998 6999999999999999999888 88889999999999965 67899999998
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe-eEEEEccCCC----CeEEEE----EccCCCEEEEEeCCCeEE
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK-CIFTLLGHLD----YIRTTF----FHHEYPWILSASDDQTIR 146 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~-~~~~~~~h~~----~V~~v~----fsp~~~~l~sgs~Dg~I~ 146 (641)
.|+.|++||+++++ ++..+..|.+ .+.+++ |+|++.++++|+.|+.|+
T Consensus 137 -----------------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~ 193 (357)
T 3i2n_A 137 -----------------------RDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIK 193 (357)
T ss_dssp -----------------------TTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEE
T ss_pred -----------------------CCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEE
Confidence 99999999999987 7888877665 899998 788999999999999999
Q ss_pred EEECCCCeeEEEEccCCCCEEEEEEec---CCCEEEEEeCCCeEEEEecCCCceeeecc-----CCCceeeecccCCCce
Q psy9327 147 IWYWQSRNCICVLTGHNHYVMCAQFHP---TDDIVVSASLDQTIRVWDISGLRKKNVAP-----GMGKLVLSMKSKHPIW 218 (641)
Q Consensus 147 vWd~~~~~~i~~l~~h~~~V~sl~fsp---~g~~lvSgs~DgtI~IWD~~~~~~~~~~~-----~~~~~v~s~~~~~~v~ 218 (641)
+||++++++... ..|...|.+++|+| ++..+++++.||.|++||+++++....+. ++...+.++... |--
T Consensus 194 i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~ 271 (357)
T 3i2n_A 194 LFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHL-PQN 271 (357)
T ss_dssp EEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEE-TTE
T ss_pred EEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEEC-CCC
Confidence 999999987544 56899999999999 99999999999999999999877665554 666666654322 111
Q ss_pred eeeeeeeeeCCCeeEEEecCC-C-------------------cceeeec-CCcceEEEEEcCCccEEE-EecCCeEEEEE
Q psy9327 219 KYCKPVKYCNPKHTLHICNRK-M-------------------EPLCNIH-ENTRVKSGAWDESGVFIY-TTSNHIKYAIV 276 (641)
Q Consensus 219 ~~~~~l~s~~~d~~I~i~d~~-~-------------------~~~~~~~-~~~~I~sla~~p~g~~L~-t~s~~~k~~l~ 276 (641)
. ..+++++.++.|++||.+ . ..+..+. +...|.+++|+|+|.+++ +++.|+.+.+|
T Consensus 272 ~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw 349 (357)
T 3i2n_A 272 R--ELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVL 349 (357)
T ss_dssp E--EEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEE
T ss_pred C--cEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEE
Confidence 1 026788899999999932 1 1233333 477899999999999998 78899999999
Q ss_pred cCCC
Q psy9327 277 NGDH 280 (641)
Q Consensus 277 ~~~~ 280 (641)
+..+
T Consensus 350 ~~~~ 353 (357)
T 3i2n_A 350 IVTK 353 (357)
T ss_dssp EECC
T ss_pred ECCC
Confidence 7654
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-27 Score=257.19 Aligned_cols=274 Identities=8% Similarity=0.059 Sum_probs=205.1
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECc---cCcccccccc------------cccCeEEEE--EeCCCCEEEEe
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYR---MNTLLEKFDE------------HEGPVRGIC--FHNQQPIFVSG 69 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~---~~~~l~~~~~------------h~~~V~~i~--fsp~~~~l~sg 69 (641)
+|.+.|++++|+|++++|++|+.||+|++||+. +++.+..+.. +...+.++. +++++.++++|
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence 599999999999999999999999999999995 5554443332 445566666 45678888888
Q ss_pred ceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc--CCCCeEEEEEccCCCEEEEEeCCCeEEE
Q psy9327 70 GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG--HLDYIRTTFFHHEYPWILSASDDQTIRI 147 (641)
Q Consensus 70 s~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~--h~~~V~~v~fsp~~~~l~sgs~Dg~I~v 147 (641)
+ .|+.|++||+++++++.++.+ |.+.|++++|+|++.+|++|+.|++|++
T Consensus 189 ~----------------------------~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~i 240 (437)
T 3gre_A 189 T----------------------------NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDI 240 (437)
T ss_dssp E----------------------------TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred e----------------------------CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEE
Confidence 7 999999999999999999998 8999999999999999999999999999
Q ss_pred EECCCCeeEEEEc-cCCCCEEEEEEec----CCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecc----------
Q psy9327 148 WYWQSRNCICVLT-GHNHYVMCAQFHP----TDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMK---------- 212 (641)
Q Consensus 148 Wd~~~~~~i~~l~-~h~~~V~sl~fsp----~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~---------- 212 (641)
||+++++++..+. +|...|++++|+| ++.++++|+.||+|++||+++++....+.++...+....
T Consensus 241 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 320 (437)
T 3gre_A 241 WDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEE 320 (437)
T ss_dssp EETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGG
T ss_pred EEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccccccc
Confidence 9999999999886 7888999996665 577999999999999999999998888876644333211
Q ss_pred -------cCCCceeeee----eeeeeCCCeeEEEec-CCCcceeeecC----CcceEEEEEcCCccEEEEe--c-CCeEE
Q psy9327 213 -------SKHPIWKYCK----PVKYCNPKHTLHICN-RKMEPLCNIHE----NTRVKSGAWDESGVFIYTT--S-NHIKY 273 (641)
Q Consensus 213 -------~~~~v~~~~~----~l~s~~~d~~I~i~d-~~~~~~~~~~~----~~~I~sla~~p~g~~L~t~--s-~~~k~ 273 (641)
...+++.+++ .+++++.|+.|++|| .++.....+.. ...+....++++..+++.. . ....+
T Consensus 321 ~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (437)
T 3gre_A 321 LNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSV 400 (437)
T ss_dssp CCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------
T ss_pred ceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEeccccccccc
Confidence 1112333333 278889999999999 45555554442 4456667777777766655 1 11112
Q ss_pred EEEcCCCCeEeccccceEEEEEc--CcEEEEEeCCCCeEEEE
Q psy9327 274 AIVNGDHGIIRTLDLPIYITKIK--GNQVYYLDRECSPHVLR 313 (641)
Q Consensus 274 ~l~~~~~g~I~~~d~p~~~~~~~--g~~v~~~~~dg~i~v~~ 313 (641)
.....+.+.|..+.. ... +..+++++.||.|++|+
T Consensus 401 ~~~~~h~~~I~~i~~-----~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 401 DDSLYHHDIINSIST-----CEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ------CCCEEEEEE-----EESSSSEEEEEEETTSCEEEEC
T ss_pred CcccccccceeeEee-----eccCCceEEEEEcCCceEEEeC
Confidence 223334555554332 223 67899999999999995
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-27 Score=257.17 Aligned_cols=248 Identities=17% Similarity=0.260 Sum_probs=203.8
Q ss_pred eeeccCCCCeEEEEEccC-CCeEEEEeCCCcEEEEECcc----------CcccccccccccCeEEEEEeCCCC-EEEEec
Q psy9327 3 TKFETKSARVKGLSFHPK-RPWILSSLHNGVIQLWDYRM----------NTLLEKFDEHEGPVRGICFHNQQP-IFVSGG 70 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspd-g~~Lasg~~dg~I~iWD~~~----------~~~l~~~~~h~~~V~~i~fsp~~~-~l~sgs 70 (641)
.....|.+.|++++|+|+ +.+|++|+.||.|++||+.+ .+.+..+..|...|.+++|+|++. +|++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 345689999999999997 67999999999999999987 567778889999999999999988 999998
Q ss_pred eeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee-------EEEEccCCCCeEEEEEcc-CCCEEEEEeCC
Q psy9327 71 KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC-------IFTLLGHLDYIRTTFFHH-EYPWILSASDD 142 (641)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~-------~~~~~~h~~~V~~v~fsp-~~~~l~sgs~D 142 (641)
.||+|++||+.++.. ...+.+|.+.|.+++|+| ++.+|++++.|
T Consensus 202 ----------------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d 253 (430)
T 2xyi_A 202 ----------------------------DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD 253 (430)
T ss_dssp ----------------------------TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT
T ss_pred ----------------------------CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC
Confidence 999999999987422 567788999999999999 67899999999
Q ss_pred CeEEEEECCCC---eeEEEEccCCCCEEEEEEecCCC-EEEEEeCCCeEEEEecCC-CceeeeccCCCceeeecccCCCc
Q psy9327 143 QTIRIWYWQSR---NCICVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISG-LRKKNVAPGMGKLVLSMKSKHPI 217 (641)
Q Consensus 143 g~I~vWd~~~~---~~i~~l~~h~~~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~-~~~~~~~~~~~~~v~s~~~~~~v 217 (641)
+.|++||++++ +++..+.+|...|++++|+|++. ++++|+.||+|++||+++ ......+.+|...+.++... |-
T Consensus 254 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~s-p~ 332 (430)
T 2xyi_A 254 QKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS-PH 332 (430)
T ss_dssp SEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEEC-SS
T ss_pred CeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEEC-CC
Confidence 99999999987 57778889999999999999886 799999999999999998 45566777676666654322 11
Q ss_pred eeeeeeeeeeCCCeeEEEecCCC---------------cceeeec-CCcceEEEEEcCCcc-EEEEecCCeEEEEEcCCC
Q psy9327 218 WKYCKPVKYCNPKHTLHICNRKM---------------EPLCNIH-ENTRVKSGAWDESGV-FIYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 218 ~~~~~~l~s~~~d~~I~i~d~~~---------------~~~~~~~-~~~~I~sla~~p~g~-~L~t~s~~~k~~l~~~~~ 280 (641)
-. .-+++++.++.|.+||... ..+.... +...|.+++|+|++. ++++++.++.+.+|+...
T Consensus 333 ~~--~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 333 NE--TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp CT--TEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred CC--CEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 00 1166788999999999432 2333332 366799999999998 888888888888887654
Q ss_pred C
Q psy9327 281 G 281 (641)
Q Consensus 281 g 281 (641)
+
T Consensus 411 ~ 411 (430)
T 2xyi_A 411 N 411 (430)
T ss_dssp H
T ss_pred c
Confidence 4
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.7e-27 Score=253.69 Aligned_cols=244 Identities=14% Similarity=0.262 Sum_probs=190.0
Q ss_pred ceeeccCC------------CCeEEEEEccCC--CeEEEEeCCCcEEEEECccCccc-----------------------
Q psy9327 2 LTKFETKS------------ARVKGLSFHPKR--PWILSSLHNGVIQLWDYRMNTLL----------------------- 44 (641)
Q Consensus 2 l~~~~~H~------------~~V~~l~fspdg--~~Lasg~~dg~I~iWD~~~~~~l----------------------- 44 (641)
+..+++|. +.|++++|+|++ .+|++|+.||+|++||+.+++..
T Consensus 74 ~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 153 (447)
T 3dw8_B 74 YSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLR 153 (447)
T ss_dssp EEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCC
T ss_pred ecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceE
Confidence 45788998 889999999998 79999999999999999764431
Q ss_pred ----------------cc-ccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEE
Q psy9327 45 ----------------EK-FDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWN 107 (641)
Q Consensus 45 ----------------~~-~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD 107 (641)
.. ..+|..+|.+++|+|++.+|++| .|+.|++||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-----------------------------~d~~i~iwd 204 (447)
T 3dw8_B 154 VPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-----------------------------DDLRINLWH 204 (447)
T ss_dssp CCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-----------------------------CSSEEEEEE
T ss_pred eccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-----------------------------CCCeEEEEE
Confidence 12 35799999999999999999987 599999999
Q ss_pred CCC-CeeEEE-------EccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEECCCCee----EEEEccCCC----------
Q psy9327 108 YKQ-RKCIFT-------LLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRNC----ICVLTGHNH---------- 164 (641)
Q Consensus 108 ~~t-~~~~~~-------~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~I~vWd~~~~~~----i~~l~~h~~---------- 164 (641)
+++ ++.+.. +.+|.+.|.+++|+|++ .+|++|+.|++|++||+++++. +..+.+|..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (447)
T 3dw8_B 205 LEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEI 284 (447)
T ss_dssp TTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHH
T ss_pred CCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCcccccccccc
Confidence 994 444442 56899999999999998 8999999999999999999886 788888886
Q ss_pred --CEEEEEEecCCCEEEEEeCCCeEEEEecCC-CceeeeccCCCceeeec---ccCCC---ceeeee-----eeeeeCCC
Q psy9327 165 --YVMCAQFHPTDDIVVSASLDQTIRVWDISG-LRKKNVAPGMGKLVLSM---KSKHP---IWKYCK-----PVKYCNPK 230 (641)
Q Consensus 165 --~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~-~~~~~~~~~~~~~v~s~---~~~~~---v~~~~~-----~l~s~~~d 230 (641)
.|.+++|+|++.+|++++. ++|++||+++ ++....+.+|......+ ..... ++.+++ .+++++.|
T Consensus 285 ~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~d 363 (447)
T 3dw8_B 285 ISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYN 363 (447)
T ss_dssp TTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECST
T ss_pred CceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccC
Confidence 8999999999999999999 9999999997 77777777664221100 00000 011111 17788999
Q ss_pred eeEEEecCCCcceee----------------------------------ecCCcceEEEEEcCCccEEEEecCCeEEEE
Q psy9327 231 HTLHICNRKMEPLCN----------------------------------IHENTRVKSGAWDESGVFIYTTSNHIKYAI 275 (641)
Q Consensus 231 ~~I~i~d~~~~~~~~----------------------------------~~~~~~I~sla~~p~g~~L~t~s~~~k~~l 275 (641)
+.|++||........ +.....|.+++|+|+|.+|++++.++-+..
T Consensus 364 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~ 442 (447)
T 3dw8_B 364 NFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIF 442 (447)
T ss_dssp TEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEE
T ss_pred CEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecceeeee
Confidence 999999944322211 122456889999999999999987764443
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-26 Score=233.73 Aligned_cols=240 Identities=20% Similarity=0.207 Sum_probs=206.0
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC---cccccccccccCeEEEEEeCCCCEEEEeceeeEEeee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN---TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~---~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~ 78 (641)
+..+..|.+.|.+++|+|+++++++|+.||.|++|++... +.+..+..|..+|.+++| ++..+++++
T Consensus 52 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~-------- 121 (313)
T 3odt_A 52 GTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGS-------- 121 (313)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEE--------
T ss_pred EEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEe--------
Confidence 3567889999999999999999999999999999998654 557778889999999999 567899997
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeeEE
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQSRNCIC 157 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~~~~~i~ 157 (641)
.|+.|++|| .++....+..|.+.+.+++|+| ++.++++++.|+.|++|| .++...
T Consensus 122 --------------------~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~ 177 (313)
T 3odt_A 122 --------------------WDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIK 177 (313)
T ss_dssp --------------------TTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEE
T ss_pred --------------------CCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEE
Confidence 999999999 7888999999999999999998 899999999999999999 566777
Q ss_pred EEcc-CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEe
Q psy9327 158 VLTG-HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236 (641)
Q Consensus 158 ~l~~-h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~ 236 (641)
.+.. |...|.+++|+|++. +++++.||.|++||+++++....+.+|...+.++.....- .+++++.++.|++|
T Consensus 178 ~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-----~l~~~~~dg~v~iw 251 (313)
T 3odt_A 178 TFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-----DIVSCGEDRTVRIW 251 (313)
T ss_dssp EECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-----CEEEEETTSEEEEE
T ss_pred EEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-----CEEEEecCCEEEEE
Confidence 8877 999999999999998 9999999999999999999998888887777765433211 26788899999999
Q ss_pred c-CCCcceeeecC-CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe
Q psy9327 237 N-RKMEPLCNIHE-NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI 282 (641)
Q Consensus 237 d-~~~~~~~~~~~-~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~ 282 (641)
| .+......+.. ...|.+++|+|++. +++++.++.+.+|+.+++.
T Consensus 252 d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 252 SKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp CTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGG
T ss_pred ECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCc
Confidence 9 55555555544 56899999999998 5678889999999877654
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-27 Score=255.92 Aligned_cols=258 Identities=17% Similarity=0.177 Sum_probs=210.8
Q ss_pred CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC
Q psy9327 31 GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ 110 (641)
Q Consensus 31 g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t 110 (641)
..+..|+.........+.+|.++|.+++|+|++++|++|+ .|++|++||..+
T Consensus 46 ~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s----------------------------~D~~v~iWd~~~ 97 (380)
T 3iz6_a 46 RTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSAS----------------------------QDGRLIVWNALT 97 (380)
T ss_dssp GGCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEE----------------------------TTSEEEEEETTT
T ss_pred ccccccccceeEEeecccccccEEEEEEEcCCCCEEEEEe----------------------------CCCeEEEEECCC
Confidence 3455677767777888999999999999999999999998 999999999999
Q ss_pred CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe-------eEEEEccCCCCEEEEEEecCC-CEEEEEe
Q psy9327 111 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN-------CICVLTGHNHYVMCAQFHPTD-DIVVSAS 182 (641)
Q Consensus 111 ~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~-------~i~~l~~h~~~V~sl~fsp~g-~~lvSgs 182 (641)
++....+..|...|.+++|+|++.++++|+.|+.|++||+.+.. ....+.+|.+.|.++.|+|++ ..|++|+
T Consensus 98 ~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s 177 (380)
T 3iz6_a 98 SQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGS 177 (380)
T ss_dssp TEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEEC
T ss_pred CccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEEC
Confidence 99999999999999999999999999999999999999987532 345678999999999999974 5799999
Q ss_pred CCCeEEEEecCCCceeeec-----cCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC--Ccceeeec-CCcceEE
Q psy9327 183 LDQTIRVWDISGLRKKNVA-----PGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK--MEPLCNIH-ENTRVKS 254 (641)
Q Consensus 183 ~DgtI~IWD~~~~~~~~~~-----~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~--~~~~~~~~-~~~~I~s 254 (641)
.|++|++||+++++....+ .+|...+.++....+-- ..+++++.|+.|++||.+ ...+..+. +...|.+
T Consensus 178 ~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~---~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~ 254 (380)
T 3iz6_a 178 GDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNA---NMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINS 254 (380)
T ss_dssp TTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSC---CEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCE
T ss_pred CCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCC---CEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEE
Confidence 9999999999999887766 44555565544321110 126788899999999943 34454444 5789999
Q ss_pred EEEcCCccEEEEecCCeEEEEEcCCCCe-Eecccc------------ceEEEEEcCcEEEEEeCCCCeEEEEeCCcch
Q psy9327 255 GAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDL------------PIYITKIKGNQVYYLDRECSPHVLRIDPTEF 319 (641)
Q Consensus 255 la~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~------------p~~~~~~~g~~v~~~~~dg~i~v~~~~~~~~ 319 (641)
++|+|+|.++++++.|+.+.+|+...+. +..+.. ....+..++..+++++.||.+++|+....+.
T Consensus 255 v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~ 332 (380)
T 3iz6_a 255 VKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEM 332 (380)
T ss_dssp EEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCE
T ss_pred EEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCce
Confidence 9999999999999999999999987764 333321 1234567899999999999999999765443
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-27 Score=253.02 Aligned_cols=238 Identities=11% Similarity=0.116 Sum_probs=170.1
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc-----cccccccccCeEEEEEeC--------CCCEEEEeceeeEEe
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL-----LEKFDEHEGPVRGICFHN--------QQPIFVSGGKMIVMA 76 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~-----l~~~~~h~~~V~~i~fsp--------~~~~l~sgs~~~~~~ 76 (641)
..+....+++++.++++|+.|++|+|||.++++. +..+.+|.+.|.+++|+| ++.+|++|+
T Consensus 90 ~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s------ 163 (393)
T 4gq1_A 90 GDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG------ 163 (393)
T ss_dssp -------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE------
T ss_pred CCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE------
Confidence 3333444455667899999999999999987753 455789999999999998 788999998
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCee
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
.|++|+|||+.++.++..+.+|.++|.+++|+|++. +|++|+.|++|++||+++++.
T Consensus 164 ----------------------~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~ 221 (393)
T 4gq1_A 164 ----------------------DDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLS 221 (393)
T ss_dssp ----------------------TTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-
T ss_pred ----------------------CCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcc
Confidence 999999999999998888889999999999999875 799999999999999988754
Q ss_pred EEE-------------------------EccCCCCEEEEEEe-cCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceee
Q psy9327 156 ICV-------------------------LTGHNHYVMCAQFH-PTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVL 209 (641)
Q Consensus 156 i~~-------------------------l~~h~~~V~sl~fs-p~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~ 209 (641)
... ..+|...+.++.|+ |++..+++++.|+++++||+.+++....+..+...+.
T Consensus 222 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~ 301 (393)
T 4gq1_A 222 AEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLG 301 (393)
T ss_dssp ---------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----------------
T ss_pred cccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccc
Confidence 322 24688889999997 7999999999999999999998777666654432222
Q ss_pred ecccCCC---------ceeee-------eeeeeeCCCeeEEEec-CCCcce-eeecCCcceEEEEEcCCccEEEEecCCe
Q psy9327 210 SMKSKHP---------IWKYC-------KPVKYCNPKHTLHICN-RKMEPL-CNIHENTRVKSGAWDESGVFIYTTSNHI 271 (641)
Q Consensus 210 s~~~~~~---------v~~~~-------~~l~s~~~d~~I~i~d-~~~~~~-~~~~~~~~I~sla~~p~g~~L~t~s~~~ 271 (641)
+...... ..... .-+++++.|+.|++|| .++... ....+..+|.+++|+|+|.+|++++.++
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G 381 (393)
T 4gq1_A 302 PKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS 381 (393)
T ss_dssp --CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE
T ss_pred cEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 2111000 00000 1156788899999999 334333 3445678999999999999999999887
Q ss_pred EEEE
Q psy9327 272 KYAI 275 (641)
Q Consensus 272 k~~l 275 (641)
.+.+
T Consensus 382 v~lv 385 (393)
T 4gq1_A 382 VLLT 385 (393)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 6543
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-26 Score=237.55 Aligned_cols=244 Identities=16% Similarity=0.146 Sum_probs=192.4
Q ss_pred cccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC--CeeEEEEccCC
Q psy9327 44 LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ--RKCIFTLLGHL 121 (641)
Q Consensus 44 l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t--~~~~~~~~~h~ 121 (641)
+..+.+|.+.|.+++|+|++++|++|+ .|++|++||+.+ ++++.++.+|.
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s----------------------------~D~~v~iw~~~~~~~~~~~~l~gH~ 53 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCS----------------------------SDKTIKIFEVEGETHKLIDTLTGHE 53 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEE----------------------------TTSCEEEEEBCSSCBCCCEEECCCS
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEe----------------------------CCCEEEEEecCCCCcEEEEEEcccc
Confidence 345678999999999999999999998 999999999974 46788999999
Q ss_pred CCeEEEEEccC--CCEEEEEeCCCeEEEEECCCCe--eEEEEccCCCCEEEEEEecC--CCEEEEEeCCCeEEEEecCCC
Q psy9327 122 DYIRTTFFHHE--YPWILSASDDQTIRIWYWQSRN--CICVLTGHNHYVMCAQFHPT--DDIVVSASLDQTIRVWDISGL 195 (641)
Q Consensus 122 ~~V~~v~fsp~--~~~l~sgs~Dg~I~vWd~~~~~--~i~~l~~h~~~V~sl~fsp~--g~~lvSgs~DgtI~IWD~~~~ 195 (641)
++|.+++|+|+ +.+|++|+.|++|++||+++++ ++..+.+|...|.+++|+|+ +.+|++|+.|++|++||+++.
T Consensus 54 ~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 54 GPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred CCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 99999999863 8899999999999999998874 66778899999999999997 899999999999999999876
Q ss_pred ce--eeeccCCCceeeecccCCCcee----------eeeeeeeeCCCeeEEEecCC-Cc----ceeeec-CCcceEEEEE
Q psy9327 196 RK--KNVAPGMGKLVLSMKSKHPIWK----------YCKPVKYCNPKHTLHICNRK-ME----PLCNIH-ENTRVKSGAW 257 (641)
Q Consensus 196 ~~--~~~~~~~~~~v~s~~~~~~v~~----------~~~~l~s~~~d~~I~i~d~~-~~----~~~~~~-~~~~I~sla~ 257 (641)
.. ...+.+|...+.++... |... ....+++++.|+.|++||.+ .. ....+. +...|.+++|
T Consensus 134 ~~~~~~~~~~h~~~v~~~~~~-p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~ 212 (297)
T 2pm7_B 134 GTTSPIIIDAHAIGVNSASWA-PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 212 (297)
T ss_dssp SCBCCEEEECCSSCEEEEEEC-CCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred CceeeeeeecccCccceEeec-CCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEE
Confidence 32 34455666666554322 2100 01137888999999999933 22 233333 5788999999
Q ss_pred cCCc---cEEEEecCCeEEEEEcCCCCe----Eecc-----ccceE--EEEEcCcEEEEEeCCCCeEEEEeCC
Q psy9327 258 DESG---VFIYTTSNHIKYAIVNGDHGI----IRTL-----DLPIY--ITKIKGNQVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 258 ~p~g---~~L~t~s~~~k~~l~~~~~g~----I~~~-----d~p~~--~~~~~g~~v~~~~~dg~i~v~~~~~ 316 (641)
+|++ .++++++.|+.+.+|+.+.+. ...+ ..++. .+..++..+++++.|+.+++|+.+.
T Consensus 213 sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 213 SPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp CCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred CCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 9984 899999999999999866531 1122 22333 2456789999999999999998863
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=266.44 Aligned_cols=239 Identities=8% Similarity=0.086 Sum_probs=182.7
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc-ccccccccccCeEEE--EEeCCC-CEEEEeceeeEEeee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT-LLEKFDEHEGPVRGI--CFHNQQ-PIFVSGGKMIVMAYQ 78 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~-~l~~~~~h~~~V~~i--~fsp~~-~~l~sgs~~~~~~~~ 78 (641)
..+.+|.+.|++++|+|++ .|++|+.||+|++||++++. ....+..|.++|.++ +|+|++ .+|++|+
T Consensus 260 ~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S-------- 330 (524)
T 2j04_B 260 LTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVA-------- 330 (524)
T ss_dssp EEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEE--------
T ss_pred EEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEec--------
Confidence 3678999999999999865 89999999999999998774 445678999999999 567887 8899998
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC--CeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeE
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD--YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~--~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i 156 (641)
.|++|++||++++++..++.+|.. .|.+++|+|+++.+++++.|++|++||++++.++
T Consensus 331 --------------------~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~ 390 (524)
T 2j04_B 331 --------------------VDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAV 390 (524)
T ss_dssp --------------------TTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCC
T ss_pred --------------------cCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccc
Confidence 999999999999888777777764 5889999999999999999999999999999998
Q ss_pred EEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEe
Q psy9327 157 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236 (641)
Q Consensus 157 ~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~ 236 (641)
.++.+|.+.|++++|+|+++.|+||+.||+|++||.... ............ ....+|.+.++ ..++.+++|
T Consensus 391 ~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~----~~~~v~~v~~s----p~g~~~~~~ 461 (524)
T 2j04_B 391 HPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSATQ----KSLRLWKWDYS----IKDDKYRID 461 (524)
T ss_dssp EEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC------C----CCCEEEECBCC----SSSCEEEEC
T ss_pred eeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccCccce----eeeEEEEeccC----CCCCeEEcc
Confidence 899999999999999999999999999999999998653 221111000000 00112222221 122345555
Q ss_pred c--------CCCcceeeec-CCcceEEEEEcCCc---cEEEEecCCeEEEEEcCC
Q psy9327 237 N--------RKMEPLCNIH-ENTRVKSGAWDESG---VFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 237 d--------~~~~~~~~~~-~~~~I~sla~~p~g---~~L~t~s~~~k~~l~~~~ 279 (641)
+ .++..+..+. +...|.+++|+|++ .++++|+.+|.+.||+.+
T Consensus 462 ~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~ 516 (524)
T 2j04_B 462 SSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLS 516 (524)
T ss_dssp CCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECS
T ss_pred CCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcc
Confidence 5 1233333333 57899999999995 499999999999998753
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-26 Score=249.98 Aligned_cols=237 Identities=23% Similarity=0.345 Sum_probs=202.8
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+..+.+|.+.|.+++| ++++|++|+.||+|++||+.+++.+..+..|.+.|.+++|++ ..+++|+
T Consensus 166 ~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s----------- 230 (435)
T 1p22_A 166 KRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCS----------- 230 (435)
T ss_dssp EEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEE-----------
T ss_pred EEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEee-----------
Confidence 4578899999999999 788999999999999999999999999999999999999974 4888887
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeE---EEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCI---FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~---~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
.|+.|++||+.+++.. ..+.+|.+.|.+++| ++.++++|+.|++|++||+++++++..
T Consensus 231 -----------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~ 291 (435)
T 1p22_A 231 -----------------KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRT 291 (435)
T ss_dssp -----------------TTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred -----------------CCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEE
Confidence 9999999999987655 678899999999999 678999999999999999999999999
Q ss_pred EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~ 238 (641)
+.+|...|.++.|+ +..+++|+.||+|++||+++++....+.+|...+.++..... .+++++.|+.|++||.
T Consensus 292 ~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~------~l~sg~~dg~i~vwd~ 363 (435)
T 1p22_A 292 LNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK------RIVSGAYDGKIKVWDL 363 (435)
T ss_dssp EECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSS------EEEEEETTSCEEEEEH
T ss_pred EcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEecCC------EEEEEeCCCcEEEEEC
Confidence 99999999999994 789999999999999999999999999988888877665221 2678889999999992
Q ss_pred C-Cc---------ceeee-cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe
Q psy9327 239 K-ME---------PLCNI-HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI 282 (641)
Q Consensus 239 ~-~~---------~~~~~-~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~ 282 (641)
. .. .+..+ .+...|.+++| ++.++++++.|+.+.+|+..++.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 364 VAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp HHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-----
T ss_pred CCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCC
Confidence 2 11 33333 35778999999 56789999999999999876543
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.4e-26 Score=267.07 Aligned_cols=183 Identities=10% Similarity=0.138 Sum_probs=147.3
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEecee-eEEeee-------
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKM-IVMAYQ------- 78 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~-~~~~~~------- 78 (641)
.|.+.|.+++|+| |++|++++.|++|++||+.+++.+..+. |.+.|.+++|+|++.++++|+.. .+..|+
T Consensus 56 ~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~ 133 (902)
T 2oaj_A 56 EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS 133 (902)
T ss_dssp SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc
Confidence 4788999999999 8899999999999999999999888885 77899999999999999998732 222222
Q ss_pred ------------------ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccC------------------CC
Q psy9327 79 ------------------GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH------------------LD 122 (641)
Q Consensus 79 ------------------~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h------------------~~ 122 (641)
+.+......|.....+++++.|+.| +||+++++++..+..| .+
T Consensus 134 ~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~ 212 (902)
T 2oaj_A 134 SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTP 212 (902)
T ss_dssp EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCC
T ss_pred cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCC
Confidence 1223334445555678899999999 9999999999988766 57
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE--E---cc-------------CCCCEEEEEEec----CC-CEEE
Q psy9327 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV--L---TG-------------HNHYVMCAQFHP----TD-DIVV 179 (641)
Q Consensus 123 ~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~--l---~~-------------h~~~V~sl~fsp----~g-~~lv 179 (641)
.|.+++|+|++.+|++|+.|++|++||+++++++.. + .+ |...|.+++|++ ++ .+++
T Consensus 213 ~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~ 292 (902)
T 2oaj_A 213 KVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLI 292 (902)
T ss_dssp CEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEE
T ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEE
Confidence 899999999999999999999999999999988764 2 12 345799999964 33 4677
Q ss_pred EEeCC-----CeEEEEec
Q psy9327 180 SASLD-----QTIRVWDI 192 (641)
Q Consensus 180 Sgs~D-----gtI~IWD~ 192 (641)
+|+.| +.+++|++
T Consensus 293 sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 293 SHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp EEECSTTSSCCCEEEEEE
T ss_pred eCCCCCCCCCceEEEEec
Confidence 77665 36777773
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-26 Score=238.84 Aligned_cols=242 Identities=15% Similarity=0.153 Sum_probs=186.5
Q ss_pred ccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe--eEEEEccCCCCe
Q psy9327 47 FDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK--CIFTLLGHLDYI 124 (641)
Q Consensus 47 ~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~--~~~~~~~h~~~V 124 (641)
+.+|.++|.+++|+|++.+|++|+ .|++|++||+.+++ .+.++.+|.++|
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs----------------------------~D~~v~lwd~~~~~~~~~~~l~gH~~~V 60 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCS----------------------------SDRSVKIFDVRNGGQILIADLRGHEGPV 60 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEE----------------------------TTTEEEEEEEETTEEEEEEEEECCSSCE
T ss_pred cccccCeEEEeeEcCCCCEEEEEe----------------------------CCCeEEEEEecCCCcEEEEEEcCCCccE
Confidence 458999999999999999999998 99999999998875 567899999999
Q ss_pred EEEEEcc--CCCEEEEEeCCCeEEEEECCCC--eeEEEEccCCCCEEEEEEecC--CCEEEEEeCCCeEEEEecCCCce-
Q psy9327 125 RTTFFHH--EYPWILSASDDQTIRIWYWQSR--NCICVLTGHNHYVMCAQFHPT--DDIVVSASLDQTIRVWDISGLRK- 197 (641)
Q Consensus 125 ~~v~fsp--~~~~l~sgs~Dg~I~vWd~~~~--~~i~~l~~h~~~V~sl~fsp~--g~~lvSgs~DgtI~IWD~~~~~~- 197 (641)
.+++|+| ++.+|+||+.|++|++||++++ .+...+.+|...|++++|+|+ +.+|++|+.|++|++||+++...
T Consensus 61 ~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~ 140 (316)
T 3bg1_A 61 WQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQW 140 (316)
T ss_dssp EEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCE
T ss_pred EEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCc
Confidence 9999976 4889999999999999999887 467788999999999999998 78999999999999999987532
Q ss_pred --eeeccCCCceeeecccCCCce-------------eeeeeeeeeCCCeeEEEecCC-C---cceeeec-CCcceEEEEE
Q psy9327 198 --KNVAPGMGKLVLSMKSKHPIW-------------KYCKPVKYCNPKHTLHICNRK-M---EPLCNIH-ENTRVKSGAW 257 (641)
Q Consensus 198 --~~~~~~~~~~v~s~~~~~~v~-------------~~~~~l~s~~~d~~I~i~d~~-~---~~~~~~~-~~~~I~sla~ 257 (641)
...+.+|...+.++....... .....+++++.|+.|++||.+ . .....+. +...|.+++|
T Consensus 141 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~ 220 (316)
T 3bg1_A 141 EVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAW 220 (316)
T ss_dssp EECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEEC
T ss_pred ceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEe
Confidence 344455554444432211100 001137788999999999954 2 2333333 4678999999
Q ss_pred cCCc----cEEEEecCCeEEEEEcCCCC--------eEeccccceEE--EEEcCcEEEEEeCCCCeEEEEeCC
Q psy9327 258 DESG----VFIYTTSNHIKYAIVNGDHG--------IIRTLDLPIYI--TKIKGNQVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 258 ~p~g----~~L~t~s~~~k~~l~~~~~g--------~I~~~d~p~~~--~~~~g~~v~~~~~dg~i~v~~~~~ 316 (641)
+|++ .+|++++.|+.+.+|+.++. .+...+.++.. +..++..+++++.|+.+++|+.+.
T Consensus 221 sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 221 APSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp CCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred cCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 9986 89999999999999986652 23333444443 446688999999999999999863
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-25 Score=244.32 Aligned_cols=275 Identities=8% Similarity=0.042 Sum_probs=212.0
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc---ccccccc------------------------------------
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT---LLEKFDE------------------------------------ 49 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~---~l~~~~~------------------------------------ 49 (641)
..++.+++|+|+|++|+++ .++.|++||+.+|+ .+..+..
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3678999999999966655 57899999999888 5544432
Q ss_pred ------------------cccCeEEEEEeCCCCEE-EEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC-
Q psy9327 50 ------------------HEGPVRGICFHNQQPIF-VSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK- 109 (641)
Q Consensus 50 ------------------h~~~V~~i~fsp~~~~l-~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~- 109 (641)
|.+.|.+++|+|++++| ++|+ .|+.|++||+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~----------------------------~dg~v~iwd~~~ 134 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACAD----------------------------SDKSLLVFDVDK 134 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEG----------------------------GGTEEEEEEECS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEEC----------------------------CCCeEEEEECcC
Confidence 33479999999999996 7776 89999999999
Q ss_pred -CCeeEEEEc--cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE----EEccCCCCEEEEEEecC---CCEEE
Q psy9327 110 -QRKCIFTLL--GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC----VLTGHNHYVMCAQFHPT---DDIVV 179 (641)
Q Consensus 110 -t~~~~~~~~--~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~----~l~~h~~~V~sl~fsp~---g~~lv 179 (641)
+++.+..+. .|...|.+++|+|++.+|++|+.|+.|++|++.+++... .+.+|...|++++|+|+ +.+|+
T Consensus 135 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~ 214 (450)
T 2vdu_B 135 TSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFII 214 (450)
T ss_dssp SSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEE
T ss_pred CCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEE
Confidence 888888886 577899999999999999999999999999998876443 77889999999999999 99999
Q ss_pred EEeCCCeEEEEecCCCceeee-ccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeec----------
Q psy9327 180 SASLDQTIRVWDISGLRKKNV-APGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIH---------- 247 (641)
Q Consensus 180 Sgs~DgtI~IWD~~~~~~~~~-~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~---------- 247 (641)
+|+.|++|++||+++++.... ..+|...+.++..... ..+++++.|+.|++|| ..+..+..+.
T Consensus 215 s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~sd~-----~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~ 289 (450)
T 2vdu_B 215 TSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCGKD-----YLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLN 289 (450)
T ss_dssp EEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEECST-----TEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCC
T ss_pred EEcCCCcEEEEECCCCceeeeeecCCCCceEEEEECCC-----CEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhh
Confidence 999999999999999887776 5577777766543211 1266788999999999 4455454443
Q ss_pred ----------------CCcceEEEEEcCCccEEEEec-CCeEEEEEcC--CCC----eEeccc--cceEEEEEc-CcEEE
Q psy9327 248 ----------------ENTRVKSGAWDESGVFIYTTS-NHIKYAIVNG--DHG----IIRTLD--LPIYITKIK-GNQVY 301 (641)
Q Consensus 248 ----------------~~~~I~sla~~p~g~~L~t~s-~~~k~~l~~~--~~g----~I~~~d--~p~~~~~~~-g~~v~ 301 (641)
....+.+++|+|++.++++++ .++.+.+|+. ..+ .+..+. .++...... +..++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v 369 (450)
T 2vdu_B 290 DQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQV 369 (450)
T ss_dssp TTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEE
T ss_pred hcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEE
Confidence 134688999999999999998 8999999987 433 222222 223322222 44455
Q ss_pred EEeC-------CCCeEEEEeCCc
Q psy9327 302 YLDR-------ECSPHVLRIDPT 317 (641)
Q Consensus 302 ~~~~-------dg~i~v~~~~~~ 317 (641)
+.+. +..+.+|.++..
T Consensus 370 ~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 370 TLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EECCTTCCSSCCCSEEEEEEETT
T ss_pred EEecccCCCCCCcceEEEEEEcC
Confidence 5443 344788887754
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.1e-26 Score=242.50 Aligned_cols=198 Identities=12% Similarity=0.077 Sum_probs=167.2
Q ss_pred cCCCCeEEEEEccCCCeEEEEe--CCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 7 TKSARVKGLSFHPKRPWILSSL--HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~--~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
.+...+.+++|||||+++++++ .|++|+|||+.+++.+..++ |.+.|.+++|+|++.++++++
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s-------------- 195 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYIT-------------- 195 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEEC--------------
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecc--------------
Confidence 3456799999999999987544 68999999999999888874 888999999999999999986
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEE--EccCCCCeEEEEEccCCCEEEEEeCCC----eEEEEECCCCee---
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT--LLGHLDYIRTTFFHHEYPWILSASDDQ----TIRIWYWQSRNC--- 155 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~--~~~h~~~V~~v~fsp~~~~l~sgs~Dg----~I~vWd~~~~~~--- 155 (641)
++.+.+|+..+++.+.. ..+|...|++++|+|++..+++++.|+ .+++||......
T Consensus 196 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~ 260 (365)
T 4h5i_A 196 ---------------GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVL 260 (365)
T ss_dssp ---------------SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEE
T ss_pred ---------------ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecce
Confidence 45677777777766543 456889999999999999999999887 688899876653
Q ss_pred -EEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeec-cCCCceeeecccCCCceeeeeeeeeeCCCeeE
Q psy9327 156 -ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA-PGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTL 233 (641)
Q Consensus 156 -i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~-~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I 233 (641)
...+.+|...|++++|+|+|.+|++|+.|++|+|||+++++.+..+ .+
T Consensus 261 ~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~g------------------------------ 310 (365)
T 4h5i_A 261 RSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQA------------------------------ 310 (365)
T ss_dssp EEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTS------------------------------
T ss_pred eeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCc------------------------------
Confidence 4567899999999999999999999999999999999988766553 22
Q ss_pred EEecCCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcC
Q psy9327 234 HICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 234 ~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~ 278 (641)
|...|++++|+|+|.+|+++|.|+.+.+|+.
T Consensus 311 --------------H~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 311 --------------HSFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp --------------SSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred --------------ccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 3567899999999999999988877777764
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=4e-25 Score=227.35 Aligned_cols=244 Identities=15% Similarity=0.224 Sum_probs=196.9
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
++++|...|++++|+|++++|++|+.||+|++||+++++.+..+.+|...+.++.+ ++..+++++
T Consensus 62 ~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~------------- 126 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGS------------- 126 (318)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEE-------------
T ss_pred EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEe-------------
Confidence 34678899999999999999999999999999999999999999999999887665 456888887
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCC-eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe----eEEE
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN----CICV 158 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~-~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~----~i~~ 158 (641)
.++.+++|+..++ ..+..+.+|...+..++|++++.++++++.|++|++||+++++ ....
T Consensus 127 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 191 (318)
T 4ggc_A 127 ---------------RSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQT 191 (318)
T ss_dssp ---------------TTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEE
T ss_pred ---------------cCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceee
Confidence 9999999998876 5567888999999999999999999999999999999998765 3455
Q ss_pred EccCCCCEEEEEEecCCC-E--EEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEE
Q psy9327 159 LTGHNHYVMCAQFHPTDD-I--VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHI 235 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~-~--lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i 235 (641)
...|.+.|.++.++|++. . +++++.|++|++||.+............ .+..+..... ... .-++++..++.|++
T Consensus 192 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~-~v~~~~~~~~-~~~-~~~~sg~~d~~i~i 268 (318)
T 4ggc_A 192 FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS-QVCSILWSPH-YKE-LISGHGFAQNQLVI 268 (318)
T ss_dssp ECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSS-CEEEEEEETT-TTE-EEEEECTTTCCEEE
T ss_pred ecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccccee-eeeeeeeccc-ccc-eEEEEEcCCCEEEE
Confidence 677899999999999765 3 3467789999999999877665554322 2222111100 000 01345668999999
Q ss_pred ec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCC
Q psy9327 236 CN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 236 ~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~ 280 (641)
|| .++..+..+. |...|.+++|+|+|.+|++++.|+.+.+|+..+
T Consensus 269 wd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 269 WKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 99 5677777775 578999999999999999999999999997543
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.8e-26 Score=240.94 Aligned_cols=263 Identities=11% Similarity=0.027 Sum_probs=196.6
Q ss_pred EccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEE
Q psy9327 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSV 96 (641)
Q Consensus 17 fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (641)
+.+++.++++|+.||+|++||+.+++.+..+. ...|.++.|+|+ +++++
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s-------------------------- 92 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRG-------------------------- 92 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEEC--------------------------
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEec--------------------------
Confidence 44578899999999999999999998888775 578889999998 88887
Q ss_pred eeCCCeEEEEECC---------CCeeEEEEc-cCCCCeEEEEEcc--CCCEEEEEeCCCeEEEEECCCCeeEEEEc-cCC
Q psy9327 97 LGDDYKIKVWNYK---------QRKCIFTLL-GHLDYIRTTFFHH--EYPWILSASDDQTIRIWYWQSRNCICVLT-GHN 163 (641)
Q Consensus 97 ~s~Dg~I~vWD~~---------t~~~~~~~~-~h~~~V~~v~fsp--~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~-~h~ 163 (641)
.|++|++|+.. +++.+..+. +|.++|.+++|+| ++.++++|+.|++|++||+++++++.... .|.
T Consensus 93 --~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~ 170 (343)
T 3lrv_A 93 --PCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSD 170 (343)
T ss_dssp --STTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSS
T ss_pred --CCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCC
Confidence 89999999654 555555554 6888999999999 99999999999999999999999877764 455
Q ss_pred CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCcee-eeccC-CCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCC
Q psy9327 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK-NVAPG-MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKM 240 (641)
Q Consensus 164 ~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~-~~~~~-~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~ 240 (641)
..|++++|+|++.++++|+.||+|++||+++++.. ..+.+ |...|.++..... - ..+++++ ++.|++|| ++.
T Consensus 171 ~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~-g---~~l~s~~-~~~v~iwd~~~~ 245 (343)
T 3lrv_A 171 VEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADN-G---YWMVVEC-DQTVVCFDLRKD 245 (343)
T ss_dssp CCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTT-S---SEEEEEE-SSBEEEEETTSS
T ss_pred CceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCC-C---CEEEEEe-CCeEEEEEcCCC
Confidence 68999999999999999999999999999999887 66776 7777766543211 1 1155665 44999999 444
Q ss_pred cceeeec----CCcce--EEEEEcCCccEEEEecC-CeEEEEEcCCCCeEecccc-ceE--EEEE---cCcEEEEEeCCC
Q psy9327 241 EPLCNIH----ENTRV--KSGAWDESGVFIYTTSN-HIKYAIVNGDHGIIRTLDL-PIY--ITKI---KGNQVYYLDREC 307 (641)
Q Consensus 241 ~~~~~~~----~~~~I--~sla~~p~g~~L~t~s~-~~k~~l~~~~~g~I~~~d~-p~~--~~~~---~g~~v~~~~~dg 307 (641)
.....+. +...+ .+++|+|+|.++++++. ++.+.+|+.+.+. +.|+. |+. .+.. +...++.++.||
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~ 324 (343)
T 3lrv_A 246 VGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKT-KNWTKDEESALCLQSDTADFTDMDVVCGDG 324 (343)
T ss_dssp TTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTT-CSEEEEEEEECCC----CCCCEEEEEEETT
T ss_pred CcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccc-cceEecCceeEecCccccccceeEEEecCC
Confidence 4433322 12333 36999999999999887 8889998654321 11221 111 1222 567888889999
Q ss_pred CeEEEEeCCcc
Q psy9327 308 SPHVLRIDPTE 318 (641)
Q Consensus 308 ~i~v~~~~~~~ 318 (641)
.+.++-.....
T Consensus 325 ~~~~~~~~~~~ 335 (343)
T 3lrv_A 325 GIAAILKTNDS 335 (343)
T ss_dssp EEEEEEECSSE
T ss_pred ceEEEEecCCe
Confidence 98888665544
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-25 Score=243.62 Aligned_cols=234 Identities=14% Similarity=0.121 Sum_probs=185.6
Q ss_pred ccCCCCeEEEEEccCCCeE-EEEeCCCcEEEEECc--cCccccccc--ccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 6 ETKSARVKGLSFHPKRPWI-LSSLHNGVIQLWDYR--MNTLLEKFD--EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~~L-asg~~dg~I~iWD~~--~~~~l~~~~--~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
.+|.+.|.+++|+|++++| ++|+.||.|++||+. +++.+..+. .|...|.+++|+|++.+|++|+
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~---------- 168 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIAD---------- 168 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEE----------
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEe----------
Confidence 4677899999999999996 899999999999999 888888876 5678999999999999999998
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEE----EEccCCCCeEEEEEccC---CCEEEEEeCCCeEEEEECCCC
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIF----TLLGHLDYIRTTFFHHE---YPWILSASDDQTIRIWYWQSR 153 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~----~~~~h~~~V~~v~fsp~---~~~l~sgs~Dg~I~vWd~~~~ 153 (641)
.|+.|++||+.+++... .+.+|.+.|.+++|+|+ +.+|++|+.|++|++||++++
T Consensus 169 ------------------~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~ 230 (450)
T 2vdu_B 169 ------------------KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC 230 (450)
T ss_dssp ------------------TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT
T ss_pred ------------------CCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC
Confidence 89999999998876543 77889999999999999 999999999999999999999
Q ss_pred eeEEE-EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCC--ceeeec--------------ccCCC
Q psy9327 154 NCICV-LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG--KLVLSM--------------KSKHP 216 (641)
Q Consensus 154 ~~i~~-l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~--~~v~s~--------------~~~~~ 216 (641)
+++.. +.+|...|++++|+ ++.+|++++.|++|++||+++++....+..+. ..+... .....
T Consensus 231 ~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (450)
T 2vdu_B 231 FIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFA 309 (450)
T ss_dssp TCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCC
T ss_pred ceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEE
Confidence 98887 56999999999999 99999999999999999999998877665321 000000 00011
Q ss_pred ceeeee-----eeeeeC-CCeeEEEecC--C-C---cceeeecCCcceEEEEEcCCccEEEEec
Q psy9327 217 IWKYCK-----PVKYCN-PKHTLHICNR--K-M---EPLCNIHENTRVKSGAWDESGVFIYTTS 268 (641)
Q Consensus 217 v~~~~~-----~l~s~~-~d~~I~i~d~--~-~---~~~~~~~~~~~I~sla~~p~g~~L~t~s 268 (641)
+..+.+ .++++. .++.|.+|+. . . ..+..+.....+.+++|+|++.+++.++
T Consensus 310 v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~ 373 (450)
T 2vdu_B 310 VSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDN 373 (450)
T ss_dssp EEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECC
T ss_pred EEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEec
Confidence 111211 134444 8999999996 2 2 3344455568899999999755444433
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-25 Score=233.57 Aligned_cols=248 Identities=15% Similarity=0.151 Sum_probs=197.2
Q ss_pred CcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC--CCeeEEEEc
Q psy9327 41 NTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK--QRKCIFTLL 118 (641)
Q Consensus 41 ~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~--t~~~~~~~~ 118 (641)
|+++..+.+|.++|.+++|+|++++|++|+ .|+.|++||+. +++.+..+.
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~----------------------------~dg~i~iw~~~~~~~~~~~~~~ 52 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGKRLATCS----------------------------SDKTIKIFEVEGETHKLIDTLT 52 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSSEEEEEE----------------------------TTSCEEEEEEETTEEEEEEEEC
T ss_pred CCccEEecCCcccEEEEEEcCCCCEEEEEE----------------------------CCCcEEEEecCCCcceeeeEec
Confidence 456778899999999999999999999998 99999999998 567788899
Q ss_pred cCCCCeEEEEEccC--CCEEEEEeCCCeEEEEECCCCe--eEEEEccCCCCEEEEEEecC--CCEEEEEeCCCeEEEEec
Q psy9327 119 GHLDYIRTTFFHHE--YPWILSASDDQTIRIWYWQSRN--CICVLTGHNHYVMCAQFHPT--DDIVVSASLDQTIRVWDI 192 (641)
Q Consensus 119 ~h~~~V~~v~fsp~--~~~l~sgs~Dg~I~vWd~~~~~--~i~~l~~h~~~V~sl~fsp~--g~~lvSgs~DgtI~IWD~ 192 (641)
+|.+.|++++|+++ +.+|++|+.|+.|++||+.+++ .+..+.+|...|.+++|+|+ +..+++++.|++|++||+
T Consensus 53 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~ 132 (379)
T 3jrp_A 53 GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEF 132 (379)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEC
T ss_pred CCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEec
Confidence 99999999999987 8999999999999999999987 78888899999999999999 999999999999999999
Q ss_pred CCCce--eeeccCCCceeeecccCCCcee---------eeeeeeeeCCCeeEEEecCC-Cc----ceeeec-CCcceEEE
Q psy9327 193 SGLRK--KNVAPGMGKLVLSMKSKHPIWK---------YCKPVKYCNPKHTLHICNRK-ME----PLCNIH-ENTRVKSG 255 (641)
Q Consensus 193 ~~~~~--~~~~~~~~~~v~s~~~~~~v~~---------~~~~l~s~~~d~~I~i~d~~-~~----~~~~~~-~~~~I~sl 255 (641)
++... ...+.++...+.++........ -...+++++.++.|++||.+ .. ....+. +...|.++
T Consensus 133 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~ 212 (379)
T 3jrp_A 133 KENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV 212 (379)
T ss_dssp CTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred CCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEE
Confidence 88743 3344556666666443221000 01126778899999999933 22 222232 47889999
Q ss_pred EEcCC---ccEEEEecCCeEEEEEcCCCC----eEecc-----ccceE--EEEEcCcEEEEEeCCCCeEEEEeCC
Q psy9327 256 AWDES---GVFIYTTSNHIKYAIVNGDHG----IIRTL-----DLPIY--ITKIKGNQVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 256 a~~p~---g~~L~t~s~~~k~~l~~~~~g----~I~~~-----d~p~~--~~~~~g~~v~~~~~dg~i~v~~~~~ 316 (641)
+|+|+ +.++++++.++.+.+|+...+ ..... ..++. .+..++..+++++.||.+++|+++.
T Consensus 213 ~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 213 AWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp EECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred EECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 99999 899999999999999997765 22222 22233 3556788999999999999999985
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-25 Score=265.27 Aligned_cols=281 Identities=9% Similarity=0.082 Sum_probs=209.2
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
..+|.+.|++++|+|++++||+|+.||+|+|||...++....+ .|..+|.+++|+| +.+|++++
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s-------------- 76 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYLVVIN-------------- 76 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEEEEEE--------------
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEEEEEE--------------
Confidence 4589999999999999999999999999999998877665554 4788999999999 78999997
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeE--------
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI-------- 156 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i-------- 156 (641)
.|++|++||+.+++++.++. |.+.|++++|+|++.++++|+.||+|++||++++++.
T Consensus 77 --------------~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~ 141 (902)
T 2oaj_A 77 --------------AKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQ 141 (902)
T ss_dssp --------------TTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHH
T ss_pred --------------CcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceecccc
Confidence 99999999999999998886 7789999999999999999999999999999988764
Q ss_pred ---EEEccCCCCEEEEEEecC-CCEEEEEeCCCeEEEEecCCCceeeeccCCC---cee-----ee-cccCCCceeeeee
Q psy9327 157 ---CVLTGHNHYVMCAQFHPT-DDIVVSASLDQTIRVWDISGLRKKNVAPGMG---KLV-----LS-MKSKHPIWKYCKP 223 (641)
Q Consensus 157 ---~~l~~h~~~V~sl~fsp~-g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~---~~v-----~s-~~~~~~v~~~~~~ 223 (641)
..+.+|.+.|++++|+|+ +..+++|+.||+| +||+++++....+..+. ..- .. .....++..+.+.
T Consensus 142 ~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fs 220 (902)
T 2oaj_A 142 KSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYH 220 (902)
T ss_dssp HHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEEC
T ss_pred ccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEc
Confidence 234679999999999996 5789999999999 99999998877776440 000 00 0001123333332
Q ss_pred -----eeeeCCCeeEEEecC-CCcceee--e-----c------------CCcceEEEEEc----CCc-cEEEEecCC---
Q psy9327 224 -----VKYCNPKHTLHICNR-KMEPLCN--I-----H------------ENTRVKSGAWD----ESG-VFIYTTSNH--- 270 (641)
Q Consensus 224 -----l~s~~~d~~I~i~d~-~~~~~~~--~-----~------------~~~~I~sla~~----p~g-~~L~t~s~~--- 270 (641)
+++++.|+.|++||. +++.+.. + + +...|.+++|+ |++ ..+++|+.+
T Consensus 221 pdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~ 300 (902)
T 2oaj_A 221 PNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRG 300 (902)
T ss_dssp TTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTS
T ss_pred CCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCC
Confidence 788999999999994 4444432 2 1 13479999994 553 567777543
Q ss_pred --eEEEEEc-CCC------------------CeEecccc----ceEEEE------------EcCcEEEEEeCCCCeEEEE
Q psy9327 271 --IKYAIVN-GDH------------------GIIRTLDL----PIYITK------------IKGNQVYYLDRECSPHVLR 313 (641)
Q Consensus 271 --~k~~l~~-~~~------------------g~I~~~d~----p~~~~~------------~~g~~v~~~~~dg~i~v~~ 313 (641)
..+.+|. +.+ ...+.+.. .+.... .++..++.++.||.+++|+
T Consensus 301 ~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~ 380 (902)
T 2oaj_A 301 DNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETML 380 (902)
T ss_dssp SCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEE
T ss_pred CCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEE
Confidence 2455554 211 11222211 111111 1234788888999999999
Q ss_pred eCCc
Q psy9327 314 IDPT 317 (641)
Q Consensus 314 ~~~~ 317 (641)
+.++
T Consensus 381 ~~~g 384 (902)
T 2oaj_A 381 YPSG 384 (902)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 8654
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=237.33 Aligned_cols=242 Identities=12% Similarity=0.108 Sum_probs=170.9
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
..++.|.+.|++++|+|||++|++|+.+| +++||..+++..... +...+..++++++++.++..+
T Consensus 13 ~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------------ 77 (355)
T 3vu4_A 13 VPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQ--EMRHLSKVRMLHRTNYVAFVT------------ 77 (355)
T ss_dssp ------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEE--ECSCCCEEEECTTSSEEEEEC------------
T ss_pred cccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeee--ecCCeEEEEEcCCCCEEEEEE------------
Confidence 35688999999999999999999998776 789998877655443 233588899999888875433
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCC-----------------------------
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY----------------------------- 133 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~----------------------------- 133 (641)
+.|++|++||..+++++..+. |...|.+++|+++.
T Consensus 78 ---------------~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~ 141 (355)
T 3vu4_A 78 ---------------GVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGG 141 (355)
T ss_dssp ---------------SSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEE
T ss_pred ---------------CCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCc
Confidence 155566666666666555554 44455555555432
Q ss_pred ------CEEEE--EeCCCeEEEEECCCCe----------------eEEEEccCCCCEEEEEEecCCCEEEEEeCCCe-EE
Q psy9327 134 ------PWILS--ASDDQTIRIWYWQSRN----------------CICVLTGHNHYVMCAQFHPTDDIVVSASLDQT-IR 188 (641)
Q Consensus 134 ------~~l~s--gs~Dg~I~vWd~~~~~----------------~i~~l~~h~~~V~sl~fsp~g~~lvSgs~Dgt-I~ 188 (641)
.+++. |+.||.|++||+++++ ++..+.+|.+.|++++|+|+|.+|++|+.|++ |+
T Consensus 142 ~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~ 221 (355)
T 3vu4_A 142 VCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIR 221 (355)
T ss_dssp EEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEE
T ss_pred eEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEE
Confidence 34444 5789999999998765 27789999999999999999999999999998 99
Q ss_pred EEecCCCceeeecc-CCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEe
Q psy9327 189 VWDISGLRKKNVAP-GMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTT 267 (641)
Q Consensus 189 IWD~~~~~~~~~~~-~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~ 267 (641)
+||+++++....+. + .+...|.+++|+|+|.+|+++
T Consensus 222 iwd~~~~~~~~~~~~g-------------------------------------------~h~~~v~~~~~s~~~~~l~s~ 258 (355)
T 3vu4_A 222 VFKTEDGVLVREFRRG-------------------------------------------LDRADVVDMKWSTDGSKLAVV 258 (355)
T ss_dssp EEETTTCCEEEEEECT-------------------------------------------TCCSCEEEEEECTTSCEEEEE
T ss_pred EEECCCCcEEEEEEcC-------------------------------------------CCCCcEEEEEECCCCCEEEEE
Confidence 99999877665554 2 024567778888888888888
Q ss_pred cCCeEEEEEcCCCCeEe---ccc--------------------------cceEEEEEcCcEEEEEeCCCCeEEEEeCCcc
Q psy9327 268 SNHIKYAIVNGDHGIIR---TLD--------------------------LPIYITKIKGNQVYYLDRECSPHVLRIDPTE 318 (641)
Q Consensus 268 s~~~k~~l~~~~~g~I~---~~d--------------------------~p~~~~~~~g~~v~~~~~dg~i~v~~~~~~~ 318 (641)
+.|+.+.+|+.+.+... .+. .....+..++..++.++.||.+++|.+.+++
T Consensus 259 s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 259 SDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp ETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred ECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 88888888876543210 000 0122355567788888888888888776544
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-25 Score=235.91 Aligned_cols=283 Identities=10% Similarity=0.005 Sum_probs=198.4
Q ss_pred CCeEEEEEccCCCeEEEEeCCC-------cEEEEECccCccc----------ccccccccCeEEEEEeCCCCEEEEecee
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNG-------VIQLWDYRMNTLL----------EKFDEHEGPVRGICFHNQQPIFVSGGKM 72 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg-------~I~iWD~~~~~~l----------~~~~~h~~~V~~i~fsp~~~~l~sgs~~ 72 (641)
-+|.+++|+|||++|++||.+. .|++|++..+... ..+..|...|.++++ ++..+++|..
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~--~~~~~~~g~~- 91 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDA--SKGIILVGCN- 91 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEE--ETTEEEEECC-
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEe--CCCEEEEEEC-
Confidence 4899999999999999998643 5999998755321 124567778877765 4557777641
Q ss_pred eEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee----EEEE-----ccCCCCeEEEEEccCCCEEEEE--eC
Q psy9327 73 IVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC----IFTL-----LGHLDYIRTTFFHHEYPWILSA--SD 141 (641)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~----~~~~-----~~h~~~V~~v~fsp~~~~l~sg--s~ 141 (641)
........++.|+.+++|++.+... .... ..+...+++++|+|||+++++| +.
T Consensus 92 ----------------~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~ 155 (365)
T 4h5i_A 92 ----------------ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKV 155 (365)
T ss_dssp ----------------CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCS
T ss_pred ----------------CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCC
Confidence 1112222345788999999876532 1111 2355679999999999987654 47
Q ss_pred CCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeee--ccCCCceeeecccCCCcee
Q psy9327 142 DQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNV--APGMGKLVLSMKSKHPIWK 219 (641)
Q Consensus 142 Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~--~~~~~~~v~s~~~~~~v~~ 219 (641)
|++|++||+++++++..+. |.+.|.+++|+|+|.++++++.| .+++|+..+++.... ..++...+.++... |--.
T Consensus 156 d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fs-pdg~ 232 (365)
T 4h5i_A 156 PAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFI-ADDT 232 (365)
T ss_dssp SCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEE-ETTE
T ss_pred CCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEc-CCCC
Confidence 8999999999999998886 77889999999999999999866 556666666555433 33444455443211 1000
Q ss_pred eeeeeeeeCCCe----eEEEecCCCcc-----eeee-cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eec-c-
Q psy9327 220 YCKPVKYCNPKH----TLHICNRKMEP-----LCNI-HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRT-L- 286 (641)
Q Consensus 220 ~~~~l~s~~~d~----~I~i~d~~~~~-----~~~~-~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~-~- 286 (641)
.+++++.++ .+..|+..... ...+ .+...|.+++|+|+|.+|++|+.|+.+.+|+.+++. ++. +
T Consensus 233 ---~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~ 309 (365)
T 4h5i_A 233 ---VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQ 309 (365)
T ss_dssp ---EEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETT
T ss_pred ---EEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecC
Confidence 133443333 67788733221 1222 346789999999999999999999999999998875 443 2
Q ss_pred --ccceEE--EEEcCcEEEEEeCCCCeEEEEeCCc
Q psy9327 287 --DLPIYI--TKIKGNQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 287 --d~p~~~--~~~~g~~v~~~~~dg~i~v~~~~~~ 317 (641)
..++.. +..++..|++++.|+++++|++.+.
T Consensus 310 gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 310 AHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp SSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred cccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 234443 5578999999999999999999643
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-25 Score=244.14 Aligned_cols=250 Identities=8% Similarity=0.052 Sum_probs=178.4
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEE----------e
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM----------A 76 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~----------~ 76 (641)
.-...|.+++|||||+++|+++.|++|+ |...+ ..+++|...|.+++|+|+|. ......+ .
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~---~~l~gh~~~v~~V~FsPdg~----~~~~~~~~~~~~~~~~~~ 83 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYA---KDINCNSKNLFHVKEFPLEF----ENKLDFELAQQNGLLNSQ 83 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCC---SCCSSBGGGTEEEEEECCCC----CCTTTTSCCCSSCSSTTS
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--ccccc---ceecCCCccEEEEEECCCCC----cceEEEEeCCCceEeecC
Confidence 3457899999999999999999999998 64333 33356666666666666661 1000000 0
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC-----CeEEEEEccCCCEEEEEeCCCeEEEEECC
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD-----YIRTTFFHHEYPWILSASDDQTIRIWYWQ 151 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~-----~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~ 151 (641)
+...+......| .....++++.||.|++||.++ ++..+. |.. .|.+++|||+|++|++|+.||+|++||++
T Consensus 84 ~~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 84 PVCYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp CSCCEEEEEECS-SSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 011111111222 233445566999999999644 677777 776 49999999999999999999999999999
Q ss_pred CCe-------eEEEE----ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCcee---eec-cCCCceeeecccCCC
Q psy9327 152 SRN-------CICVL----TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK---NVA-PGMGKLVLSMKSKHP 216 (641)
Q Consensus 152 ~~~-------~i~~l----~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~---~~~-~~~~~~v~s~~~~~~ 216 (641)
++. .+.++ .+|.+.|.+++|+|+| +++++.|++|++||+.+.... .++ .+|...|.++... .
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-g 236 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-D 236 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-T
T ss_pred CCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-C
Confidence 875 36776 6788899999999999 888999999999999887743 344 3454555544332 1
Q ss_pred ceeeeeeeeeeCCCeeEEEecCCCcce--eeecCCcceEEEEE--cCCccEEEEecCCeEEEEEcCC
Q psy9327 217 IWKYCKPVKYCNPKHTLHICNRKMEPL--CNIHENTRVKSGAW--DESGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 217 v~~~~~~l~s~~~d~~I~i~d~~~~~~--~~~~~~~~I~sla~--~p~g~~L~t~s~~~k~~l~~~~ 279 (641)
..+++++ ++.|++||...... ....+...+.+++| +|++..+++++.+|. .+|..+
T Consensus 237 -----~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 237 -----YKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp -----TEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred -----CEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 1245554 68999999554444 23356889999999 999999999999998 777654
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-24 Score=223.62 Aligned_cols=244 Identities=13% Similarity=0.122 Sum_probs=190.6
Q ss_pred cccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC----eeEEEEccCC
Q psy9327 46 KFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR----KCIFTLLGHL 121 (641)
Q Consensus 46 ~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~----~~~~~~~~h~ 121 (641)
.+.+|.++|++++|+|++.+|++|+ .||.|++||+.++ +....+.+|.
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~----------------------------~dg~i~iw~~~~~~~~~~~~~~~~~~~ 57 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCS----------------------------SDQHIKVFKLDKDTSNWELSDSWRAHD 57 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEE----------------------------TTSEEEEEEECSSSCCEEEEEEEECCS
T ss_pred cCcccccceeEEEEcCCCCEEEEee----------------------------CCCeEEEEECCCCCCcceecceeccCC
Confidence 4568999999999999999999998 9999999999876 5778889999
Q ss_pred CCeEEEEEcc--CCCEEEEEeCCCeEEEEECCCC---------eeEEEEccCCCCEEEEEEecC--CCEEEEEeCCCeEE
Q psy9327 122 DYIRTTFFHH--EYPWILSASDDQTIRIWYWQSR---------NCICVLTGHNHYVMCAQFHPT--DDIVVSASLDQTIR 188 (641)
Q Consensus 122 ~~V~~v~fsp--~~~~l~sgs~Dg~I~vWd~~~~---------~~i~~l~~h~~~V~sl~fsp~--g~~lvSgs~DgtI~ 188 (641)
++|.+++|+| ++.+|++|+.|++|++||++++ +++..+.+|...|.+++|+|+ +.++++++.||+|+
T Consensus 58 ~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~ 137 (351)
T 3f3f_A 58 SSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILR 137 (351)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEE
T ss_pred CcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEE
Confidence 9999999999 5899999999999999999887 678889999999999999999 99999999999999
Q ss_pred EEecCCCceeeecc-------------CCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcc---eeeec-CCcc
Q psy9327 189 VWDISGLRKKNVAP-------------GMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEP---LCNIH-ENTR 251 (641)
Q Consensus 189 IWD~~~~~~~~~~~-------------~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~---~~~~~-~~~~ 251 (641)
+||+++++....+. ++...+.++... |.......+++++.++.+.+|+..... +..+. +...
T Consensus 138 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 216 (351)
T 3f3f_A 138 LYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWC-PSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSL 216 (351)
T ss_dssp EEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEEC-CCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSC
T ss_pred EecCCChHHhccccccccccccccccCCcccceeEEEec-cCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcc
Confidence 99999877654432 122222222211 100001126677788888777744333 33333 4779
Q ss_pred eEEEEEcCCc----cEEEEecCCeEEEEEcCCCC----------------------------------------------
Q psy9327 252 VKSGAWDESG----VFIYTTSNHIKYAIVNGDHG---------------------------------------------- 281 (641)
Q Consensus 252 I~sla~~p~g----~~L~t~s~~~k~~l~~~~~g---------------------------------------------- 281 (641)
|.+++|+|++ .++++++.|+.+.+|+...+
T Consensus 217 i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (351)
T 3f3f_A 217 IRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQV 296 (351)
T ss_dssp EEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEE
T ss_pred eeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccc
Confidence 9999999998 89999999999999986653
Q ss_pred -eEecc---ccceEE--EEEcCcEEEEEeCCCCeEEEEeCCcc
Q psy9327 282 -IIRTL---DLPIYI--TKIKGNQVYYLDRECSPHVLRIDPTE 318 (641)
Q Consensus 282 -~I~~~---d~p~~~--~~~~g~~v~~~~~dg~i~v~~~~~~~ 318 (641)
.+..+ ..++.. +..++..+++++.||.+++|+++.+.
T Consensus 297 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 297 ELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp EEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred cEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 12212 112332 44568899999999999999998754
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-25 Score=244.01 Aligned_cols=223 Identities=10% Similarity=0.132 Sum_probs=172.2
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccccccc-----CeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEG-----PVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~-----~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.|.+.|.+++|||+|.+||+++.||+|++||.+. ++..+. |.. .|.+++|||+|.+|++|+
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs----------- 148 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGN----------- 148 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEE-----------
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEc-----------
Confidence 5688999999999999999999999999999544 666677 666 499999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCe-------eEEEE----ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEEC
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRK-------CIFTL----LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYW 150 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~-------~~~~~----~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~ 150 (641)
.||+|++||+.++. .+.++ .+|.+.|.+++|+|++ +++++.|++|++||+
T Consensus 149 -----------------~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~ 209 (588)
T 2j04_A 149 -----------------EDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTV 209 (588)
T ss_dssp -----------------TTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECC
T ss_pred -----------------CCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEEC
Confidence 99999999999885 36776 6788899999999999 889999999999999
Q ss_pred CCCee---EEEE-ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccC-CCceeeeeeee
Q psy9327 151 QSRNC---ICVL-TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSK-HPIWKYCKPVK 225 (641)
Q Consensus 151 ~~~~~---i~~l-~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~-~~v~~~~~~l~ 225 (641)
..+.. ..++ .+|...|.+++|+ |..+++++ |++|++||+.+++......+|...+.++... .|- ...++
T Consensus 210 ~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d---~~~La 283 (588)
T 2j04_A 210 SASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKE---STILL 283 (588)
T ss_dssp CSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSS---CEEEE
T ss_pred CCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCC---CCEEE
Confidence 88773 4567 4888999999999 68999998 6999999999888744444666655543320 110 01133
Q ss_pred eeCCCee-----------------------EEEecCCCcceeeecCCcceEEEEEcCCccEEEEec
Q psy9327 226 YCNPKHT-----------------------LHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTS 268 (641)
Q Consensus 226 s~~~d~~-----------------------I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s 268 (641)
++..+|. +++|+..+..+..+.....|.+++|+|+|..+++++
T Consensus 284 ~a~edG~klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 284 MSNKTSYKVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp ECSSCEEEEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEEE
T ss_pred EEcCCCCEEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCCEEEEEE
Confidence 4444454 444443333333333445578888888888888776
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.9e-24 Score=229.99 Aligned_cols=274 Identities=11% Similarity=0.046 Sum_probs=215.9
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccc-----cccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLE-----KFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~-----~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
..+.+++|+|++.++++++.++.|++||..+++.+. .+..|.+.|.+++|+|++.++++++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~-------------- 188 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQM-------------- 188 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG--------------
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEEC--------------
Confidence 446699999987788888889999999999988776 4567899999999999999999998
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEE-EEeCCCeEEEEECCCCeeEEEEccCC
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWYWQSRNCICVLTGHN 163 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~-sgs~Dg~I~vWd~~~~~~i~~l~~h~ 163 (641)
.|+.|++||+++++.+..+..|...+.+++|+|+++.++ +++.|+.|++||+++++.+..+..+
T Consensus 189 --------------~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~- 253 (433)
T 3bws_A 189 --------------QANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI- 253 (433)
T ss_dssp --------------GGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-
T ss_pred --------------CCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-
Confidence 899999999999999999999999999999999999875 5558999999999999988888754
Q ss_pred CCEEEEEEecCCCEEEEEe--------CCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEE
Q psy9327 164 HYVMCAQFHPTDDIVVSAS--------LDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHI 235 (641)
Q Consensus 164 ~~V~sl~fsp~g~~lvSgs--------~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i 235 (641)
..+.+++|+|++..+++++ .|+.|++||+++++....... ...+.++.. +|--. .-+.++..++.+.+
T Consensus 254 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~-~~~~~~~~~-~~~g~--~l~~~~~~~~~v~v 329 (433)
T 3bws_A 254 GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP-PGNKRHIVS-GNTEN--KIYVSDMCCSKIEV 329 (433)
T ss_dssp SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE-EECEEEEEE-CSSTT--EEEEEETTTTEEEE
T ss_pred CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccC-CCCcceEEE-CCCCC--EEEEEecCCCEEEE
Confidence 5699999999999999988 589999999998876655421 112222111 11100 01456678999999
Q ss_pred ecC-CCcceeeecCCcceEEEEEcCCccEEEEecC---------------CeEEEEEcCCCCeEe-ccc---cceE-EEE
Q psy9327 236 CNR-KMEPLCNIHENTRVKSGAWDESGVFIYTTSN---------------HIKYAIVNGDHGIIR-TLD---LPIY-ITK 294 (641)
Q Consensus 236 ~d~-~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~---------------~~k~~l~~~~~g~I~-~~d---~p~~-~~~ 294 (641)
||. .......+.....+.+++|+|+|.++++++. ++.+.+|+..++.+. .+. .+.. .+.
T Consensus 330 ~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s 409 (433)
T 3bws_A 330 YDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVS 409 (433)
T ss_dssp EETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEEC
T ss_pred EECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEc
Confidence 994 4566667777888999999999999988875 469999998777543 222 1211 244
Q ss_pred EcCcEEEEEeC-CCCeEEEEeCC
Q psy9327 295 IKGNQVYYLDR-ECSPHVLRIDP 316 (641)
Q Consensus 295 ~~g~~v~~~~~-dg~i~v~~~~~ 316 (641)
.++..+++.+. |+.+++|+++.
T Consensus 410 ~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 410 PDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp TTSCEEEEEETTTTEEEEEEETT
T ss_pred CCCCEEEEEECCCCeEEEEEecC
Confidence 56778887764 99999999874
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.93 E-value=6.3e-25 Score=228.54 Aligned_cols=231 Identities=12% Similarity=0.026 Sum_probs=190.8
Q ss_pred eeeccCCCCeEEEEEccCCC-eEEEEeCCCcEEEEEC-ccCcccccccc--cccCeEEEEEeCCCCEEEEeceeeEEeee
Q psy9327 3 TKFETKSARVKGLSFHPKRP-WILSSLHNGVIQLWDY-RMNTLLEKFDE--HEGPVRGICFHNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~-~Lasg~~dg~I~iWD~-~~~~~l~~~~~--h~~~V~~i~fsp~~~~l~sgs~~~~~~~~ 78 (641)
..+.+|.+.|.+++|+|+++ +|++|+.||.|++||+ .+++. ..+.. |...|.+++|+| +..+++++
T Consensus 50 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~-------- 119 (342)
T 1yfq_A 50 LQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAAS-------- 119 (342)
T ss_dssp EEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEE--------
T ss_pred eeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEc--------
Confidence 45668999999999999999 9999999999999999 77754 67778 999999999999 99999998
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCC---------CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEE
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ---------RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t---------~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd 149 (641)
.|+.|++||+++ ++++.++. |.+.|.+++|+|++ +++++.|+.|++||
T Consensus 120 --------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d 176 (342)
T 1yfq_A 120 --------------------WDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFR 176 (342)
T ss_dssp --------------------TTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEE
T ss_pred --------------------CCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEE
Confidence 999999999988 77777776 89999999999988 99999999999999
Q ss_pred CCC-Ce--eEEEEccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEecCCC------ceeeeccCCCc---------eeee
Q psy9327 150 WQS-RN--CICVLTGHNHYVMCAQFHP-TDDIVVSASLDQTIRVWDISGL------RKKNVAPGMGK---------LVLS 210 (641)
Q Consensus 150 ~~~-~~--~i~~l~~h~~~V~sl~fsp-~g~~lvSgs~DgtI~IWD~~~~------~~~~~~~~~~~---------~v~s 210 (641)
+++ +. .......|...|.+++|+| ++.++++++.||.|++||++.. +....+..+.. .+.+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 256 (342)
T 1yfq_A 177 LPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNS 256 (342)
T ss_dssp SSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEE
T ss_pred CCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEE
Confidence 988 44 3445567889999999999 9999999999999999999876 55666665533 4444
Q ss_pred cccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeecC--CcceEEEEEcCCccEEEEecCCeE
Q psy9327 211 MKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIHE--NTRVKSGAWDESGVFIYTTSNHIK 272 (641)
Q Consensus 211 ~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~--~~~I~sla~~p~g~~L~t~s~~~k 272 (641)
+.. +|-- ..+++++.++.|++|| .+...+..+.. ..+|.+++ |+|.+|++++.|+.
T Consensus 257 ~~~-s~~~---~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 257 IEF-SPRH---KFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp EEE-CTTT---CCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred EEE-cCCC---CEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence 321 1111 1167888999999999 44666666653 67899999 99999999887654
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.93 E-value=6.3e-25 Score=226.96 Aligned_cols=218 Identities=11% Similarity=0.056 Sum_probs=148.7
Q ss_pred CCeEEEEEccC----CCeEEEEeCCCcEEEEECccCccccc-ccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 10 ARVKGLSFHPK----RPWILSSLHNGVIQLWDYRMNTLLEK-FDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 10 ~~V~~l~fspd----g~~Lasg~~dg~I~iWD~~~~~~l~~-~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
+.|.+++|+|+ ++++++++++ +++|++.+++.+.. ..+|++.|+.++|+|+|+.+.+-. .......+...
T Consensus 112 ~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~---~~~~~v~~l~f 186 (356)
T 2w18_A 112 REIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQF---LMPPEETILTF 186 (356)
T ss_dssp EEEEEECC------CCEEEEEEEEE--EEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEE---ECCCSSCEEEE
T ss_pred cceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeec---cCCCceeeEEe
Confidence 46788888889 8888887753 55566555555544 344555555555555555444321 00000111111
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCC---CCeEEEEEccCCCEE------------EEEeCCCeEEEEE
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL---DYIRTTFFHHEYPWI------------LSASDDQTIRIWY 149 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~---~~V~~v~fsp~~~~l------------~sgs~Dg~I~vWd 149 (641)
...+.....+++++.|++|+|||+++|+++.++.+|. ..+.+++|+|++..+ ++|+.|++|++||
T Consensus 187 s~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd 266 (356)
T 2w18_A 187 AEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVIN 266 (356)
T ss_dssp EEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEE
T ss_pred eccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEE
Confidence 1112233444455699999999999999999998754 367788999999876 6688999999999
Q ss_pred CCCCeeEEEE-----ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeee
Q psy9327 150 WQSRNCICVL-----TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPV 224 (641)
Q Consensus 150 ~~~~~~i~~l-----~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l 224 (641)
..+++++..+ .+|...+.+..++ +.++++++.|++|+|||+.++++..++.+|.
T Consensus 267 ~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~------------------- 325 (356)
T 2w18_A 267 PKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVS------------------- 325 (356)
T ss_dssp TTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--------------------
T ss_pred CCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCC-------------------
Confidence 9999988776 4787776555444 8899999999999999999999888876542
Q ss_pred eeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 225 KYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 225 ~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
...+.+++|+|+|.+|++|+.|+.+.+|+
T Consensus 326 ------------------------~~vvs~vafSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 326 ------------------------DQHWSFVKWSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp -------------------------CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred ------------------------CCeEEEEEECCCCCEEEEEECCCcEEEec
Confidence 11233589999999999999888888885
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=231.75 Aligned_cols=258 Identities=14% Similarity=0.199 Sum_probs=207.5
Q ss_pred CCcEEEEECccCcccccccccccCeEEEEEeC-CCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEEC
Q psy9327 30 NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN-QQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNY 108 (641)
Q Consensus 30 dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp-~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~ 108 (641)
++.+++|++..++....+..|.++|.+++|+| ++.+|++|+ .||.|++||+
T Consensus 22 ~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~----------------------------~dg~i~iw~~ 73 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGG----------------------------SDGVIVLYDL 73 (408)
T ss_dssp HHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEE----------------------------TTSCEEEEEC
T ss_pred cCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEc----------------------------CCCeEEEEEC
Confidence 45688999988888888889999999999999 999999998 9999999999
Q ss_pred CCCeeEEEEc-------------cCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecC
Q psy9327 109 KQRKCIFTLL-------------GHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174 (641)
Q Consensus 109 ~t~~~~~~~~-------------~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~ 174 (641)
.+++....+. +|.+.|.+++|+| ++.+|++++.|+.|++||+.++++...+. +...+.++.|+|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~ 152 (408)
T 4a11_B 74 ENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPV 152 (408)
T ss_dssp CCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSS
T ss_pred CCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecC
Confidence 9876544442 5999999999999 77799999999999999999999888887 7888999999995
Q ss_pred C---CEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC-Cc-ceee----
Q psy9327 175 D---DIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK-ME-PLCN---- 245 (641)
Q Consensus 175 g---~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~-~~-~~~~---- 245 (641)
+ .++++++.|+.|++||+++++....+.+|...+.++... |--. .-+++++.++.|++||.+ .. .+..
T Consensus 153 ~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~ 229 (408)
T 4a11_B 153 STKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWS-PRYD--YILATASADSRVKLWDVRRASGCLITLDQH 229 (408)
T ss_dssp CSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEEC-SSCT--TEEEEEETTSCEEEEETTCSSCCSEECCTT
T ss_pred CCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEEC-CCCC--cEEEEEcCCCcEEEEECCCCCccccccccc
Confidence 4 499999999999999999999888888887777765432 1111 015678899999999943 22 2222
Q ss_pred ------------ecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCC--------------------------------
Q psy9327 246 ------------IHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG-------------------------------- 281 (641)
Q Consensus 246 ------------~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g-------------------------------- 281 (641)
..+...|.+++|+|+|.++++++.++.+.+|+..++
T Consensus 230 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (408)
T 4a11_B 230 NGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVF 309 (408)
T ss_dssp TTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEE
T ss_pred ccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEE
Confidence 234678999999999999999999999999986543
Q ss_pred -----eEecccc--------------ce--EEEEEcCcEEEEEeCCCCeEEEEeCCcch
Q psy9327 282 -----IIRTLDL--------------PI--YITKIKGNQVYYLDRECSPHVLRIDPTEF 319 (641)
Q Consensus 282 -----~I~~~d~--------------p~--~~~~~~g~~v~~~~~dg~i~v~~~~~~~~ 319 (641)
.|+.|+. ++ ..+..++..+++++.||.+++|+++..+.
T Consensus 310 ~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 310 VPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp EEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred EecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 2333332 12 22556788999999999999999997553
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.9e-25 Score=229.80 Aligned_cols=234 Identities=11% Similarity=0.019 Sum_probs=176.9
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECc---------cCccccccc-ccccCeEEEEEeC--CCCEEEEeceeeEEee
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYR---------MNTLLEKFD-EHEGPVRGICFHN--QQPIFVSGGKMIVMAY 77 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~---------~~~~l~~~~-~h~~~V~~i~fsp--~~~~l~sgs~~~~~~~ 77 (641)
..|.++.|+|+ +++|+.|++|++|+.. +++.+..+. .|.++|.+++|+| ++.++++++
T Consensus 77 ~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s------- 146 (343)
T 3lrv_A 77 PNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWAD------- 146 (343)
T ss_dssp ECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEE-------
T ss_pred CCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEe-------
Confidence 56778888988 9999999999999765 444344443 5678999999999 999999998
Q ss_pred eceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc-CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeE
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG-HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~-h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i 156 (641)
.|++|++||++++++...+.. |...|.+++|+|++.+|++|+.|+.|++||+++++++
T Consensus 147 ---------------------~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 147 ---------------------NRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQA 205 (343)
T ss_dssp ---------------------TTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSC
T ss_pred ---------------------CCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCC
Confidence 999999999999998777744 5568999999999999999999999999999999887
Q ss_pred -EEEcc-CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCC---ceee--ecccCCCceeeeeeeeeeCC
Q psy9327 157 -CVLTG-HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG---KLVL--SMKSKHPIWKYCKPVKYCNP 229 (641)
Q Consensus 157 -~~l~~-h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~---~~v~--s~~~~~~v~~~~~~l~s~~~ 229 (641)
..+.+ |.+.|++++|+|++.+|++++.| +|++||+++.+....+..+. ..+. ++. .+|--. .+++++.
T Consensus 206 ~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~---~l~~~s~ 280 (343)
T 3lrv_A 206 SSRFPVDEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYD-IDDSGK---NMIAYSN 280 (343)
T ss_dssp CEECCCCTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSSTTCBSSCCCBC-----CCEEEE-ECTTSS---EEEEEET
T ss_pred ccEEeccCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCcceeecccccccccccceEEE-ECCCCC---EEEEecC
Confidence 78888 99999999999999999999954 99999999987765554321 1110 011 111100 1455555
Q ss_pred -CeeEEEecC-CCcceeeecCCcceEEEEEcC---CccEEEEecCCeEEEEEcCCCCe
Q psy9327 230 -KHTLHICNR-KMEPLCNIHENTRVKSGAWDE---SGVFIYTTSNHIKYAIVNGDHGI 282 (641)
Q Consensus 230 -d~~I~i~d~-~~~~~~~~~~~~~I~sla~~p---~g~~L~t~s~~~k~~l~~~~~g~ 282 (641)
++.+++|+. +....... .++..++|++ ++..+++++.++.+.++-..+..
T Consensus 281 ~d~~i~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~ 335 (343)
T 3lrv_A 281 ESNSLTIYKFDKKTKNWTK---DEESALCLQSDTADFTDMDVVCGDGGIAAILKTNDS 335 (343)
T ss_dssp TTTEEEEEEECTTTCSEEE---EEEEECCC----CCCCEEEEEEETTEEEEEEECSSE
T ss_pred CCCcEEEEEEcccccceEe---cCceeEecCccccccceeEEEecCCceEEEEecCCe
Confidence 899999983 22221111 5677889998 88889988888777766544333
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-22 Score=216.28 Aligned_cols=245 Identities=11% Similarity=0.040 Sum_probs=194.9
Q ss_pred eeeccCCCCeEEEEEccCCCeE-EEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWI-LSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~L-asg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
..+..|. .+.+++|+|+|+++ ++++.|++|++||..+++.+..+..+. .+.+++|+|+++++++++
T Consensus 26 ~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~----------- 92 (391)
T 1l0q_A 26 ATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTN----------- 92 (391)
T ss_dssp EEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEE-----------
T ss_pred EEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEE-----------
Confidence 4556564 58999999999977 677789999999999999888886555 999999999999886654
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEE-EEEeCCCeEEEEECCCCeeEEEEc
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWI-LSASDDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l-~sgs~Dg~I~vWd~~~~~~i~~l~ 160 (641)
+.++.|++||+.+++.+..+..| ..+.+++|+|+++++ ++++.|+.|++||+.+++++..+.
T Consensus 93 ----------------~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 155 (391)
T 1l0q_A 93 ----------------MASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS 155 (391)
T ss_dssp ----------------TTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred ----------------CCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEe
Confidence 27899999999999998888754 568999999999977 788889999999999999998887
Q ss_pred cCCCCEEEEEEecCCCEE-EEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeC---CCeeEEEe
Q psy9327 161 GHNHYVMCAQFHPTDDIV-VSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCN---PKHTLHIC 236 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~l-vSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~---~d~~I~i~ 236 (641)
.| ..+.+++|+|++..+ ++++.|++|++||+++++....+... ..+.++.. +|--. .+..+. .++.|.+|
T Consensus 156 ~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~-~~~g~---~l~~~~~~~~~~~v~~~ 229 (391)
T 1l0q_A 156 VG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVE-AAPSGIAV-NPEGT---KAYVTNVDKYFNTVSMI 229 (391)
T ss_dssp CC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SEEEEEEE-CTTSS---EEEEEEECSSCCEEEEE
T ss_pred cC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecC-CCccceEE-CCCCC---EEEEEecCcCCCcEEEE
Confidence 65 457999999999877 67788999999999998877766532 23333221 11100 023333 68999999
Q ss_pred c-CCCcceeeecCCcceEEEEEcCCccEE-EEecCCeEEEEEcCCCCeE
Q psy9327 237 N-RKMEPLCNIHENTRVKSGAWDESGVFI-YTTSNHIKYAIVNGDHGII 283 (641)
Q Consensus 237 d-~~~~~~~~~~~~~~I~sla~~p~g~~L-~t~s~~~k~~l~~~~~g~I 283 (641)
| .....+..+.....+.+++|+|+|.++ ++++.++.+.+|+.+++.+
T Consensus 230 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 230 DTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTI 278 (391)
T ss_dssp ETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred ECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcE
Confidence 9 556666777767778999999999888 5667899999999887764
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-24 Score=222.74 Aligned_cols=172 Identities=16% Similarity=0.206 Sum_probs=136.2
Q ss_pred eeeccCCCCeEEEEEcc---CCCeEEEEeCCCcEEEEECccCcccccccccc---cCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 3 TKFETKSARVKGLSFHP---KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHE---GPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fsp---dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~---~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
..+.+|+..++.++|+| ++.+|++|+.|++|+|||+.+|+.+.++.+|. ..|.+++|+|++..+++++.
T Consensus 172 ~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~----- 246 (356)
T 2w18_A 172 ENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSH----- 246 (356)
T ss_dssp EEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------
T ss_pred eeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEecc-----
Confidence 34556777777777777 66789999999999999999999999998654 46888899999999988761
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE-----ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL-----LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~-----~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~ 151 (641)
+......++++.|++|++||..+++.+.++ .+|.+.+.+..+ ++.++++|+.|++|+|||+.
T Consensus 247 -----------~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~ 313 (356)
T 2w18_A 247 -----------PCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLL 313 (356)
T ss_dssp ----------------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETT
T ss_pred -----------CCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECC
Confidence 122234567789999999999999988776 477777554444 48899999999999999999
Q ss_pred CCeeEEEEccCCCCEE-EEEEecCCCEEEEEeCCCeEEEEec
Q psy9327 152 SRNCICVLTGHNHYVM-CAQFHPTDDIVVSASLDQTIRVWDI 192 (641)
Q Consensus 152 ~~~~i~~l~~h~~~V~-sl~fsp~g~~lvSgs~DgtI~IWD~ 192 (641)
+++++.++.+|.+.+. +++|+|+|++|+||+.|++|||||.
T Consensus 314 tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 314 LGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 9999999999988665 5899999999999999999999996
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-23 Score=228.58 Aligned_cols=207 Identities=19% Similarity=0.343 Sum_probs=172.8
Q ss_pred ceeeccCCCCeEEEEEccCCC-eEEEEeCCCcEEEEECccCcc-------cccccccccCeEEEEEeC-CCCEEEEecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNTL-------LEKFDEHEGPVRGICFHN-QQPIFVSGGKM 72 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~~-------l~~~~~h~~~V~~i~fsp-~~~~l~sgs~~ 72 (641)
+..+.+|.+.|.+++|+|++. +|++|+.||.|++||+.++.. ...+..|...|.+++|+| ++..|++++
T Consensus 174 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~-- 251 (430)
T 2xyi_A 174 DLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVA-- 251 (430)
T ss_dssp SEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEE--
T ss_pred cEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEe--
Confidence 457889999999999999998 999999999999999987432 455668999999999999 677888887
Q ss_pred eEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC---eeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEE
Q psy9327 73 IVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR---KCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIW 148 (641)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~---~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vW 148 (641)
.|+.|++||++++ +++..+..|.+.|++++|+|+++ ++++|+.|++|++|
T Consensus 252 --------------------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vw 305 (430)
T 2xyi_A 252 --------------------------DDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 305 (430)
T ss_dssp --------------------------TTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred --------------------------CCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEE
Confidence 9999999999987 67888889999999999999987 78999999999999
Q ss_pred ECCC-CeeEEEEccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEecCCC--------------ceeeeccCCCceeeecc
Q psy9327 149 YWQS-RNCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGL--------------RKKNVAPGMGKLVLSMK 212 (641)
Q Consensus 149 d~~~-~~~i~~l~~h~~~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~~--------------~~~~~~~~~~~~v~s~~ 212 (641)
|+++ +.++..+.+|...|.+++|+|++ .++++++.|++|++||++.. +......+|...+.++.
T Consensus 306 d~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 385 (430)
T 2xyi_A 306 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 385 (430)
T ss_dssp ETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEE
T ss_pred eCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEE
Confidence 9998 56788999999999999999998 47999999999999999872 34445555665565543
Q ss_pred cCCCceeeeeeeeeeCCCeeEEEecCC
Q psy9327 213 SKHPIWKYCKPVKYCNPKHTLHICNRK 239 (641)
Q Consensus 213 ~~~~v~~~~~~l~s~~~d~~I~i~d~~ 239 (641)
.. |--. ..+++++.++.|++|+..
T Consensus 386 ~~-p~~~--~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 386 WN-PNEP--WIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp EC-SSST--TEEEEEETTSEEEEEEEC
T ss_pred EC-CCCC--CEEEEEECCCCEEEeEcc
Confidence 22 1100 126778899999999944
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-22 Score=213.98 Aligned_cols=264 Identities=10% Similarity=0.043 Sum_probs=205.1
Q ss_pred CeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEE-EEeceeeEEeeeceeeecccCCcceeeEEEeeCC
Q psy9327 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIF-VSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDD 100 (641)
Q Consensus 22 ~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l-~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~D 100 (641)
.++++++.|+.|++||..+++.+..+..|. .+.+++|+|++.++ ++++ .|
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~----------------------------~d 53 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANA----------------------------HS 53 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEG----------------------------GG
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECC----------------------------CC
Confidence 467888999999999999999888887664 58999999999987 5555 89
Q ss_pred CeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEE-EEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEE-
Q psy9327 101 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIV- 178 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~-sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~l- 178 (641)
++|++||..+++.+..+..+. .+.+++|+|++++++ +++.|+.|++||+.+++.+..+..| ..+.+++|+|+++.+
T Consensus 54 ~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~ 131 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLY 131 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEE
T ss_pred CeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEE
Confidence 999999999999999888655 899999999999775 5557799999999999998888754 568999999999977
Q ss_pred EEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeecCCcceEEEEE
Q psy9327 179 VSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIHENTRVKSGAW 257 (641)
Q Consensus 179 vSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~ 257 (641)
++++.|+.|++||+.+++....+..+.. +.++. .+|--.. -+.++..++.|.+|| ........+.....+.+++|
T Consensus 132 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~-~~~dg~~--l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 207 (391)
T 1l0q_A 132 VTNNGDKTVSVINTVTKAVINTVSVGRS-PKGIA-VTPDGTK--VYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAV 207 (391)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECCSS-EEEEE-ECTTSSE--EEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEE
T ss_pred EEeCCCCEEEEEECCCCcEEEEEecCCC-cceEE-ECCCCCE--EEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEE
Confidence 7888899999999999888777764322 22221 1111000 124667889999999 45556666667778999999
Q ss_pred cCCccEEEEec---CCeEEEEEcCCCCeE-ecccc---ceE-EEEEcCcEE-EEEeCCCCeEEEEeCCcchh
Q psy9327 258 DESGVFIYTTS---NHIKYAIVNGDHGII-RTLDL---PIY-ITKIKGNQV-YYLDRECSPHVLRIDPTEFK 320 (641)
Q Consensus 258 ~p~g~~L~t~s---~~~k~~l~~~~~g~I-~~~d~---p~~-~~~~~g~~v-~~~~~dg~i~v~~~~~~~~~ 320 (641)
+|+|.++++++ .++.+.+|+..++.. ..+.. +.. .+..++..+ ++.+.|+.+++|+..+++..
T Consensus 208 ~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 208 NPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTIT 279 (391)
T ss_dssp CTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEE
Confidence 99999999888 689999999877643 22222 221 234557667 56688999999999875544
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-22 Score=214.89 Aligned_cols=240 Identities=11% Similarity=0.146 Sum_probs=171.4
Q ss_pred CCeEEEEEccCCCeE-EEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee----ec
Q psy9327 10 ARVKGLSFHPKRPWI-LSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL----ES 84 (641)
Q Consensus 10 ~~V~~l~fspdg~~L-asg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~----~~ 84 (641)
..+..++++++++.+ ++|+.|++|++||..+++.+..+. |..+|.+++|+++...++. +..+..|+.... ..
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~--~~~i~i~d~~~~~~~~~~ 135 (355)
T 3vu4_A 59 RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSY--GDVISVFKFGNPWKRITD 135 (355)
T ss_dssp SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEE--TTEEEEEESSTTCCBSSC
T ss_pred CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEE--cCEEEEEECCCCceeeEE
Confidence 357888999988877 567788999999999999888885 7779999999987543333 233333322111 00
Q ss_pred ccCCcc-----eeeEEE--eeCCCeEEEEECCCCe----------------eEEEEccCCCCeEEEEEccCCCEEEEEeC
Q psy9327 85 RNEPCL-----FRIKSV--LGDDYKIKVWNYKQRK----------------CIFTLLGHLDYIRTTFFHHEYPWILSASD 141 (641)
Q Consensus 85 ~~~~~~-----~~~~~~--~s~Dg~I~vWD~~t~~----------------~~~~~~~h~~~V~~v~fsp~~~~l~sgs~ 141 (641)
...+.. +...++ ++.||.|++||+.+++ .+..+.+|.++|.+++|+|++.+|++|+.
T Consensus 136 ~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~ 215 (355)
T 3vu4_A 136 DIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQ 215 (355)
T ss_dssp CEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred eccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeC
Confidence 000000 022333 6899999999999875 27889999999999999999999999999
Q ss_pred CCe-EEEEECCCCeeEEEEc-c-CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceee--eccCCCceeeecccCCC
Q psy9327 142 DQT-IRIWYWQSRNCICVLT-G-HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKN--VAPGMGKLVLSMKSKHP 216 (641)
Q Consensus 142 Dg~-I~vWd~~~~~~i~~l~-~-h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~--~~~~~~~~v~s~~~~~~ 216 (641)
|++ |++||+++++++.++. + |...|.+++|+|++.+|++++.|++|++||++...... .+.+. +. ......
T Consensus 216 d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~---~~-~~~~~~ 291 (355)
T 3vu4_A 216 DGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGW---IN-MKYFQS 291 (355)
T ss_dssp TCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTT---EE-CCCCCC
T ss_pred CCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccce---ee-cccccc
Confidence 998 9999999999999998 6 99999999999999999999999999999998653221 11110 00 011111
Q ss_pred ceeeeeeeeeeCCCeeEEEecCCCcceeeec--CCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 217 IWKYCKPVKYCNPKHTLHICNRKMEPLCNIH--ENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 217 v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~--~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
.|..+. ..+. ...+...++|+++|..+++++.++++.+|.
T Consensus 292 ~~~~~~---------------------~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~ 333 (355)
T 3vu4_A 292 EWSLCN---------------------FKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFK 333 (355)
T ss_dssp SSCSEE---------------------EECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEE
T ss_pred ccceeE---------------------EEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 111100 0001 123346689999999999998888777764
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=8.7e-23 Score=213.61 Aligned_cols=249 Identities=13% Similarity=0.112 Sum_probs=190.6
Q ss_pred EECccCcccccccccccCeEEEEEeCC---CCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC-C
Q psy9327 36 WDYRMNTLLEKFDEHEGPVRGICFHNQ---QPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ-R 111 (641)
Q Consensus 36 WD~~~~~~l~~~~~h~~~V~~i~fsp~---~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t-~ 111 (641)
|+....+.+..+.+|.+.|.+++|+|+ +.+|++|+ .|+.|++||+.+ +
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~----------------------------~dg~i~iw~~~~~~ 75 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGS----------------------------WANDVRCWEVQDSG 75 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEE----------------------------TTSEEEEEEECTTS
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEEC----------------------------CCCcEEEEEcCCCC
Confidence 445556677788899999999999999 58999998 999999999997 5
Q ss_pred eeE-EEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEE--ecCCCEEEEEeCCCeEE
Q psy9327 112 KCI-FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQF--HPTDDIVVSASLDQTIR 188 (641)
Q Consensus 112 ~~~-~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~f--sp~g~~lvSgs~DgtI~ 188 (641)
..+ ..+.+|.+.|.+++|+|++++|++|+.|+.|++||+++++++. +.+|...|.+++| +|++.++++++.||+|+
T Consensus 76 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~ 154 (368)
T 3mmy_A 76 QTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLK 154 (368)
T ss_dssp CEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEE
T ss_pred ceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEE
Confidence 544 7888999999999999999999999999999999999998776 5569999999999 88999999999999999
Q ss_pred EEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcc--eeeec--CCcceEEEEEcCCcc--
Q psy9327 189 VWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEP--LCNIH--ENTRVKSGAWDESGV-- 262 (641)
Q Consensus 189 IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~--~~~~~--~~~~I~sla~~p~g~-- 262 (641)
+||+++++....+..+. .+.++....+. +..+..++.+.+|+..... ..... ....+.++++.+++.
T Consensus 155 vwd~~~~~~~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (368)
T 3mmy_A 155 FWDTRSSNPMMVLQLPE-RCYCADVIYPM------AVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNK 227 (368)
T ss_dssp EECSSCSSCSEEEECSS-CEEEEEEETTE------EEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSC
T ss_pred EEECCCCcEEEEEecCC-CceEEEecCCe------eEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCC
Confidence 99999988887776543 33332322221 4456678999999944322 12221 234445555544333
Q ss_pred --EEEEecCCeEEEEEcCCCCe-------Eecccc------------ceEE--EEEcCcEEEEEeCCCCeEEEEeCCcch
Q psy9327 263 --FIYTTSNHIKYAIVNGDHGI-------IRTLDL------------PIYI--TKIKGNQVYYLDRECSPHVLRIDPTEF 319 (641)
Q Consensus 263 --~L~t~s~~~k~~l~~~~~g~-------I~~~d~------------p~~~--~~~~g~~v~~~~~dg~i~v~~~~~~~~ 319 (641)
.+++++.++.+.+|+.+.+. +..-.. ++.. +..++..+++++.||.+++|++.+.+.
T Consensus 228 ~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~ 307 (368)
T 3mmy_A 228 PTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTK 307 (368)
T ss_dssp EEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE
T ss_pred CCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcE
Confidence 39999999999999877652 111111 2222 445678999999999999999887554
Q ss_pred h
Q psy9327 320 K 320 (641)
Q Consensus 320 ~ 320 (641)
.
T Consensus 308 ~ 308 (368)
T 3mmy_A 308 L 308 (368)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-23 Score=242.16 Aligned_cols=245 Identities=15% Similarity=0.129 Sum_probs=192.6
Q ss_pred cccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC--CCeeEEEEccCC
Q psy9327 44 LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK--QRKCIFTLLGHL 121 (641)
Q Consensus 44 l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~--t~~~~~~~~~h~ 121 (641)
+..+.+|.++|++++|+|+++++++|+ .||+|++||+. +++.+.++.+|.
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~----------------------------~dg~I~vwd~~~~~~~~~~~l~~h~ 53 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCS----------------------------SDKTIKIFEVEGETHKLIDTLTGHE 53 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEE----------------------------TTTEEEEEEEETTEEEEEEEECCCS
T ss_pred eeecccCcceeEEEEECCCCCeEEEEE----------------------------CCCcEEEEecCCCCCccceeccCCc
Confidence 345779999999999999999999998 99999999998 557788999999
Q ss_pred CCeEEEEEccC--CCEEEEEeCCCeEEEEECCCCe--eEEEEccCCCCEEEEEEecC--CCEEEEEeCCCeEEEEecCCC
Q psy9327 122 DYIRTTFFHHE--YPWILSASDDQTIRIWYWQSRN--CICVLTGHNHYVMCAQFHPT--DDIVVSASLDQTIRVWDISGL 195 (641)
Q Consensus 122 ~~V~~v~fsp~--~~~l~sgs~Dg~I~vWd~~~~~--~i~~l~~h~~~V~sl~fsp~--g~~lvSgs~DgtI~IWD~~~~ 195 (641)
++|++++|+|+ +.+|++|+.||+|++||+.+++ .+..+.+|...|++++|+|+ +..+++|+.||+|++||+++.
T Consensus 54 ~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 54 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp SCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred CceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 99999999988 8999999999999999999987 77888999999999999999 999999999999999999887
Q ss_pred ce--eeeccCCCceeeecccCCCcee---------eeeeeeeeCCCeeEEEecCC-C----cceeee-cCCcceEEEEEc
Q psy9327 196 RK--KNVAPGMGKLVLSMKSKHPIWK---------YCKPVKYCNPKHTLHICNRK-M----EPLCNI-HENTRVKSGAWD 258 (641)
Q Consensus 196 ~~--~~~~~~~~~~v~s~~~~~~v~~---------~~~~l~s~~~d~~I~i~d~~-~----~~~~~~-~~~~~I~sla~~ 258 (641)
.. .....++...+.++........ -...+++++.++.|++||.+ . .....+ .+...|.+++|+
T Consensus 134 ~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~s 213 (753)
T 3jro_A 134 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS 213 (753)
T ss_dssp SCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC
T ss_pred CCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEec
Confidence 33 3344556666666443221000 01127788899999999933 2 222233 347899999999
Q ss_pred CC---ccEEEEecCCeEEEEEcCCCCe------Eecc---ccce--EEEEEcCcEEEEEeCCCCeEEEEeCC
Q psy9327 259 ES---GVFIYTTSNHIKYAIVNGDHGI------IRTL---DLPI--YITKIKGNQVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 259 p~---g~~L~t~s~~~k~~l~~~~~g~------I~~~---d~p~--~~~~~~g~~v~~~~~dg~i~v~~~~~ 316 (641)
|+ +.++++++.++.+.+|+...+. +... ..++ ..+..++..+++++.||.+++|+++.
T Consensus 214 p~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 214 PTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp CCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred cCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 99 9999999999999999877652 1111 1122 23556788999999999999999885
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-22 Score=216.48 Aligned_cols=246 Identities=11% Similarity=0.054 Sum_probs=195.9
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
.+.+|.+.|.+++|+|++.++++++.||.|++||.++++.+..+..|...+.+++|+|++..+++++
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------- 230 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSN------------- 230 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEE-------------
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEe-------------
Confidence 4568999999999999999999999999999999999999888988999999999999999885554
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEe--------CCCeEEEEECCCCee
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS--------DDQTIRIWYWQSRNC 155 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs--------~Dg~I~vWd~~~~~~ 155 (641)
+.|+.|++||+++++.+..+..+ +.+.+++|+|+++++++++ .|+.|++||+++++.
T Consensus 231 --------------~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~ 295 (433)
T 3bws_A 231 --------------WISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL 295 (433)
T ss_dssp --------------TTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE
T ss_pred --------------cCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE
Confidence 27999999999999998888754 5689999999999999888 589999999999987
Q ss_pred EEEEccCCCCEEEEEEecCCCE-EEEEeCCCeEEEEecCCCceeeeccCCCceeeecccC--CC-ceeeee--------e
Q psy9327 156 ICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSK--HP-IWKYCK--------P 223 (641)
Q Consensus 156 i~~l~~h~~~V~sl~fsp~g~~-lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~--~~-v~~~~~--------~ 223 (641)
+..+ .|...+.+++|+|+++. +++++.|+.|++||+.+++....++. +..+.++... .. ++.... .
T Consensus 296 ~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 373 (433)
T 3bws_A 296 IDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV-FDKPNTIALSPDGKYLYVSCRGPNHPTEGY 373 (433)
T ss_dssp EEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEECCCCCTTTCT
T ss_pred Eeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC-CCCCCeEEEcCCCCEEEEEecCCCcccccc
Confidence 7666 46678999999999974 56778999999999999887776653 2333332211 11 110000 0
Q ss_pred eeeeCCCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEec-CCeEEEEEcCC
Q psy9327 224 VKYCNPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTS-NHIKYAIVNGD 279 (641)
Q Consensus 224 l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s-~~~k~~l~~~~ 279 (641)
+.+++.|+.|.+|| ..++.+..+.....+.+++|+|+|.++++++ .++.+.+|+.+
T Consensus 374 ~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 374 LKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp TSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred ccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 22334478999999 4566677777778899999999999998876 47888887643
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-22 Score=217.37 Aligned_cols=182 Identities=11% Similarity=0.108 Sum_probs=135.7
Q ss_pred eeeccCCCCeEEEEEcc--------CCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCC-EEEEeceee
Q psy9327 3 TKFETKSARVKGLSFHP--------KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP-IFVSGGKMI 73 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fsp--------dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~-~l~sgs~~~ 73 (641)
..+++|.+.|++++|+| |+++||+|+.|++|+|||+.++..+..+..|..+|.+++|+|++. +|++|+
T Consensus 130 ~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~--- 206 (393)
T 4gq1_A 130 GGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGE--- 206 (393)
T ss_dssp CTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEE---
T ss_pred cccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecC---
Confidence 35789999999999998 889999999999999999998888888889999999999999875 688887
Q ss_pred EEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEE-------------------------EccCCCCeEEEE
Q psy9327 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT-------------------------LLGHLDYIRTTF 128 (641)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~-------------------------~~~h~~~V~~v~ 128 (641)
.|++|++||+++++.... ..+|.+.|.++.
T Consensus 207 -------------------------~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~ 261 (393)
T 4gq1_A 207 -------------------------RNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVR 261 (393)
T ss_dssp -------------------------TTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEE
T ss_pred -------------------------CCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeee
Confidence 999999999988764332 235778899999
Q ss_pred Ec-cCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEE------------------Eec--CCCEEEEEeCCCeE
Q psy9327 129 FH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQ------------------FHP--TDDIVVSASLDQTI 187 (641)
Q Consensus 129 fs-p~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~------------------fsp--~g~~lvSgs~DgtI 187 (641)
|+ |++..+++++.|+++++||+.+++....+..|...+..+. |+| ++.++++|+.||+|
T Consensus 262 ~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V 341 (393)
T 4gq1_A 262 WIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLI 341 (393)
T ss_dssp EETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEE
T ss_pred eecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEE
Confidence 87 7999999999999999999998877777666655554443 333 23467889999999
Q ss_pred EEEecCCCceeeeccCCCceeeecc
Q psy9327 188 RVWDISGLRKKNVAPGMGKLVLSMK 212 (641)
Q Consensus 188 ~IWD~~~~~~~~~~~~~~~~v~s~~ 212 (641)
++||+.+++......+++..|.++.
T Consensus 342 ~lwd~~~~~~~~~~~~~~~~V~sva 366 (393)
T 4gq1_A 342 QLINTYEKDSNSIPIQLGMPIVDFC 366 (393)
T ss_dssp EEEETTCTTCCEEEEECSSCEEEEE
T ss_pred EEEECCCCcEEEEecCCCCcEEEEE
Confidence 9999999888777766666666543
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-19 Score=195.63 Aligned_cols=247 Identities=8% Similarity=0.013 Sum_probs=182.2
Q ss_pred eeccCCCCeEEEEEcc--------------CCCeEEEEeCC------CcEEEEECccCcccccccccccCeEEEEEeCCC
Q psy9327 4 KFETKSARVKGLSFHP--------------KRPWILSSLHN------GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63 (641)
Q Consensus 4 ~~~~H~~~V~~l~fsp--------------dg~~Lasg~~d------g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~ 63 (641)
.+.+|...+..+++++ .+..++.++.+ ++|++||+. +.....+..|...|.+++|+|++
T Consensus 112 ~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg 190 (415)
T 2hqs_A 112 SYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDG 190 (415)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECTTS
T ss_pred EEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCC
Confidence 4667777777777765 15666666654 799999997 44567788899999999999999
Q ss_pred CEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCC---CeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEE-EE
Q psy9327 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDD---YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SA 139 (641)
Q Consensus 64 ~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~D---g~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~-sg 139 (641)
++|++++ .+ ..|++||+.+++.. .+..|.+.+.+++|+|+++.|+ ++
T Consensus 191 ~~la~~s----------------------------~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~ 241 (415)
T 2hqs_A 191 SKLAYVT----------------------------FESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFAL 241 (415)
T ss_dssp SEEEEEE----------------------------CTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEE
T ss_pred CEEEEEE----------------------------ecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEE
Confidence 9999987 55 49999999999875 5667889999999999999887 66
Q ss_pred eCCCe--EEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeC-CC--eEEEEecCCCceeeeccCCCceeeecccC
Q psy9327 140 SDDQT--IRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL-DQ--TIRVWDISGLRKKNVAPGMGKLVLSMKSK 214 (641)
Q Consensus 140 s~Dg~--I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~-Dg--tI~IWD~~~~~~~~~~~~~~~~v~s~~~~ 214 (641)
+.|+. |++||+.++++ ..+..|...+.+++|+|+|+.|++++. ++ .|.+||+.+++... +..++..+.++..
T Consensus 242 ~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~- 318 (415)
T 2hqs_A 242 SKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR-ITWEGSQNQDADV- 318 (415)
T ss_dssp CTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE-CCCSSSEEEEEEE-
T ss_pred ecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE-EecCCCcccCeEE-
Confidence 66654 99999998875 577789999999999999999988886 45 67778988876433 3333444433221
Q ss_pred CCceeeeeeeeeeC---CCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEecCCe---EEEEEcCCCCeEecc
Q psy9327 215 HPIWKYCKPVKYCN---PKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHI---KYAIVNGDHGIIRTL 286 (641)
Q Consensus 215 ~~v~~~~~~l~s~~---~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~---k~~l~~~~~g~I~~~ 286 (641)
.|--.. +++++ .+..|.+||........+.....+.+++|+|+|.+|++++.++ .+++|+.+.+..+.+
T Consensus 319 spdG~~---l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l 393 (415)
T 2hqs_A 319 SSDGKF---MVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARL 393 (415)
T ss_dssp CTTSSE---EEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEEC
T ss_pred CCCCCE---EEEEECcCCceEEEEEECCCCCEEEecCCCCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEe
Confidence 111010 22222 2468999995544444555545899999999999998887544 778887766655544
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.7e-19 Score=198.89 Aligned_cols=285 Identities=10% Similarity=0.120 Sum_probs=208.3
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEEC--ccCcccccccccccCeEEEEEeC----CCCEEEEeceeeEE
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDY--RMNTLLEKFDEHEGPVRGICFHN----QQPIFVSGGKMIVM 75 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~--~~~~~l~~~~~h~~~V~~i~fsp----~~~~l~sgs~~~~~ 75 (641)
+.++..+.. +.+++|+|||++|++++.|++|.+||+ .+++.+.++. +...+.+++|+| +++++++++
T Consensus 172 ~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~----- 244 (543)
T 1nir_A 172 VKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGA----- 244 (543)
T ss_dssp EEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEE-----
T ss_pred EEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEE-----
Confidence 345553333 889999999999999999999999999 7888888876 455679999999 999999987
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc----------CCC-CeEEEEEccCCC-EEEEEeCCC
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG----------HLD-YIRTTFFHHEYP-WILSASDDQ 143 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~----------h~~-~V~~v~fsp~~~-~l~sgs~Dg 143 (641)
..+++|.+||..+++++.++.. |.+ .+.++.++|+++ ++++...++
T Consensus 245 ----------------------~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g 302 (543)
T 1nir_A 245 ----------------------YWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETG 302 (543)
T ss_dssp ----------------------EESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred ----------------------ccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCC
Confidence 2689999999999999988864 223 789999999776 566778899
Q ss_pred eEEEEECCCCeeEE--EEccCCCCEEEEEEecCCCEEEEE-eCCCeEEEEecCCCceeeeccC----CCceeeecccCCC
Q psy9327 144 TIRIWYWQSRNCIC--VLTGHNHYVMCAQFHPTDDIVVSA-SLDQTIRVWDISGLRKKNVAPG----MGKLVLSMKSKHP 216 (641)
Q Consensus 144 ~I~vWd~~~~~~i~--~l~~h~~~V~sl~fsp~g~~lvSg-s~DgtI~IWD~~~~~~~~~~~~----~~~~v~s~~~~~~ 216 (641)
+|.+||+.+.+.+. .+ .+...+..+.|+|+|++++++ ..+++|.+||..+++....++. |......+ .+|
T Consensus 303 ~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~--~~p 379 (543)
T 1nir_A 303 KVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF--VHP 379 (543)
T ss_dssp EEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE--EET
T ss_pred eEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc--CCC
Confidence 99999998865433 44 366778899999999976655 5689999999999988877653 21111111 111
Q ss_pred ceeeeeeeeeeC-CCeeEEEecC-C-------CcceeeecC-CcceEEEEEcCCccEEEEecC-------CeEEEEEcCC
Q psy9327 217 IWKYCKPVKYCN-PKHTLHICNR-K-------MEPLCNIHE-NTRVKSGAWDESGVFIYTTSN-------HIKYAIVNGD 279 (641)
Q Consensus 217 v~~~~~~l~s~~-~d~~I~i~d~-~-------~~~~~~~~~-~~~I~sla~~p~g~~L~t~s~-------~~k~~l~~~~ 279 (641)
-.. ..++++. .+++|.+||. . .+.+..+.. +..+..++++|+|.+||+++. +..+.+|+.+
T Consensus 380 ~~g--~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~ 457 (543)
T 1nir_A 380 KYG--PVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLK 457 (543)
T ss_dssp TTE--EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETT
T ss_pred CCc--cEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECC
Confidence 100 0133443 6799999993 3 556666664 456788999999999999872 5689999887
Q ss_pred CCeE--ecccc---------ceEE----EEEcCcEEEEE-----eCCCCeEEEEeCCcchh
Q psy9327 280 HGII--RTLDL---------PIYI----TKIKGNQVYYL-----DRECSPHVLRIDPTEFK 320 (641)
Q Consensus 280 ~g~I--~~~d~---------p~~~----~~~~g~~v~~~-----~~dg~i~v~~~~~~~~~ 320 (641)
++.+ ..+.. .-.. +..+|..++.. +.|+.|.+|+..+.+..
T Consensus 458 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~ 518 (543)
T 1nir_A 458 NLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLK 518 (543)
T ss_dssp CTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEE
T ss_pred CCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEE
Confidence 6542 22211 1111 33568888765 24799999988876654
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.83 E-value=9.5e-19 Score=188.99 Aligned_cols=223 Identities=9% Similarity=-0.001 Sum_probs=171.0
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCC---cEEEEECccCcccccccccccCeEEEEEeCCCCEEE-EeceeeEEee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNG---VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFV-SGGKMIVMAY 77 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg---~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~-sgs~~~~~~~ 77 (641)
++.+.+|.+.|.+++|||+|++|++++.++ .|++||+.+++.. .+..|.+.+.+++|+|+++.|+ +++
T Consensus 171 ~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~------- 242 (415)
T 2hqs_A 171 QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALS------- 242 (415)
T ss_dssp CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEEC-------
T ss_pred CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEe-------
Confidence 356788999999999999999999999875 9999999988764 5667888999999999999888 444
Q ss_pred eceeeecccCCcceeeEEEeeCCC--eEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeC-CC--eEEEEECCC
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDY--KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD-DQ--TIRIWYWQS 152 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg--~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~-Dg--~I~vWd~~~ 152 (641)
.|+ .|++||+.+++. ..+..|.+.+.+++|+|++++|++++. ++ .|++||..+
T Consensus 243 ---------------------~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~ 300 (415)
T 2hqs_A 243 ---------------------KTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING 300 (415)
T ss_dssp ---------------------TTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS
T ss_pred ---------------------cCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCC
Confidence 444 599999998876 567789999999999999999998886 44 688889888
Q ss_pred CeeEEEEccCCCCEEEEEEecCCCEEEEEeCC---CeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCC
Q psy9327 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLD---QTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNP 229 (641)
Q Consensus 153 ~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~D---gtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~ 229 (641)
++. ..+..|...+.+++|+|+|++|++++.+ ..|++||+.+++... +..+. .+.++. .+|--. .+++++.
T Consensus 301 ~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~-l~~~~-~~~~~~-~spdg~---~l~~~s~ 373 (415)
T 2hqs_A 301 GAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-LSSTF-LDETPS-LAPNGT---MVIYSSS 373 (415)
T ss_dssp SCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE-CCCSS-SCEEEE-ECTTSS---EEEEEEE
T ss_pred CCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE-ecCCC-CcCCeE-EcCCCC---EEEEEEc
Confidence 764 4556678889999999999999888764 589999999887643 33222 222211 111100 0333333
Q ss_pred Ce---eEEEecCCCcceeeecC-CcceEEEEEcCCc
Q psy9327 230 KH---TLHICNRKMEPLCNIHE-NTRVKSGAWDESG 261 (641)
Q Consensus 230 d~---~I~i~d~~~~~~~~~~~-~~~I~sla~~p~g 261 (641)
++ .|.+||..+.....+.. ...|.+++|+|..
T Consensus 374 ~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 374 QGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp ETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCCC
T ss_pred CCCccEEEEEECCCCcEEEeeCCCCCCcCCcccccc
Confidence 33 79999977766666654 5789999999974
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.9e-19 Score=203.05 Aligned_cols=275 Identities=9% Similarity=0.025 Sum_probs=193.5
Q ss_pred CCCeEEEEEccCCCeEEEEeC-CC-----cEEEEECccCccccccccccc------------------------CeEEEE
Q psy9327 9 SARVKGLSFHPKRPWILSSLH-NG-----VIQLWDYRMNTLLEKFDEHEG------------------------PVRGIC 58 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~-dg-----~I~iWD~~~~~~l~~~~~h~~------------------------~V~~i~ 58 (641)
...|.+++|||||++|++++. || +|++||..+++....+..+.. .|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457999999999999999998 88 899999999876655554433 388999
Q ss_pred EeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe--eEEEEccCCCCeEEEEEccCCCEE
Q psy9327 59 FHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK--CIFTLLGHLDYIRTTFFHHEYPWI 136 (641)
Q Consensus 59 fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~--~~~~~~~h~~~V~~v~fsp~~~~l 136 (641)
|||||++|++++ . +.|.+||+.++. ....+..|.+.+..++|+|+|++|
T Consensus 116 ~SpDg~~l~~~~----------------------------~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~l 166 (741)
T 2ecf_A 116 WSPDAQRLLFPL----------------------------G-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFV 166 (741)
T ss_dssp ECTTSSEEEEEE----------------------------T-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEE
T ss_pred ECCCCCEEEEEe----------------------------C-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEE
Confidence 999999999996 3 899999999883 345577788899999999999999
Q ss_pred EEEeCCCeEEEEECCCCeeEEEEccCCCC----------------EEEEEEecCCCEEEEEeCCC---------------
Q psy9327 137 LSASDDQTIRIWYWQSRNCICVLTGHNHY----------------VMCAQFHPTDDIVVSASLDQ--------------- 185 (641)
Q Consensus 137 ~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~----------------V~sl~fsp~g~~lvSgs~Dg--------------- 185 (641)
+++++ +.|++||+.+++.......+... +.++.|+|||++|++++.|+
T Consensus 167 a~~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~ 245 (741)
T 2ecf_A 167 SFIRG-RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADR 245 (741)
T ss_dssp EEEET-TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSC
T ss_pred EEEeC-CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCc
Confidence 99885 69999999998876555444432 47899999999999988776
Q ss_pred ------------------eEEEEecCC-CceeeeccC--CCceeeecccCCCcee--eeeeeeeeCCCeeEEEecCC-Cc
Q psy9327 186 ------------------TIRVWDISG-LRKKNVAPG--MGKLVLSMKSKHPIWK--YCKPVKYCNPKHTLHICNRK-ME 241 (641)
Q Consensus 186 ------------------tI~IWD~~~-~~~~~~~~~--~~~~v~s~~~~~~v~~--~~~~l~s~~~d~~I~i~d~~-~~ 241 (641)
.|++||+.+ ++......+ +...+.++.. |--. +.........+..|.+||.. +.
T Consensus 246 ~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--pDg~~l~~~~~~~~~~~~~i~~~d~~~g~ 323 (741)
T 2ecf_A 246 TDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW--RDPQHLSFQRQSRDQKKLDLVEVTLASNQ 323 (741)
T ss_dssp EEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE--EETTEEEEEEEETTSSEEEEEEEETTTCC
T ss_pred ccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe--CCCCEEEEEEecccCCeEEEEEEECCCCc
Confidence 889999988 776544432 3344443222 1100 00000112346789999943 33
Q ss_pred ceeeecC--Cc---ceEEEEEcCCccEEEEecCCe--EEEEEcCCCCeEecccc---ceE---EEEEcCcEEE-EEeCCC
Q psy9327 242 PLCNIHE--NT---RVKSGAWDESGVFIYTTSNHI--KYAIVNGDHGIIRTLDL---PIY---ITKIKGNQVY-YLDREC 307 (641)
Q Consensus 242 ~~~~~~~--~~---~I~sla~~p~g~~L~t~s~~~--k~~l~~~~~g~I~~~d~---p~~---~~~~~g~~v~-~~~~dg 307 (641)
....... .. .+.+++|+|+|.++++++.++ +++.++.+.+ ++.+.. .+. .+..+++.++ +.+.++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~ 402 (741)
T 2ecf_A 324 QRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIES 402 (741)
T ss_dssp EEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSC
T ss_pred eEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCC
Confidence 3333222 22 456899999999888888776 4555554444 544422 221 2556677664 555555
Q ss_pred --CeEEEEeCC
Q psy9327 308 --SPHVLRIDP 316 (641)
Q Consensus 308 --~i~v~~~~~ 316 (641)
.+++|.++.
T Consensus 403 ~~~~~l~~~~~ 413 (741)
T 2ecf_A 403 ARESQIYAVPL 413 (741)
T ss_dssp TTCBEEEEEET
T ss_pred CceEEEEEEEc
Confidence 889998864
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.8e-19 Score=195.80 Aligned_cols=164 Identities=11% Similarity=0.097 Sum_probs=135.0
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc----------cccc-----cccccCeEEEEEeCCCCEEE----E
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL----------LEKF-----DEHEGPVRGICFHNQQPIFV----S 68 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~----------l~~~-----~~h~~~V~~i~fsp~~~~l~----s 68 (641)
+...++.+++++++.++++|+.|| +++|+...... +..+ -.+.+.|.+++|+|++.+|+ +
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence 345689999999999999999988 99988542110 0000 12456799999999999999 5
Q ss_pred eceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC--------e---eEEEEccCCCCeEEEEEccC-CCEE
Q psy9327 69 GGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR--------K---CIFTLLGHLDYIRTTFFHHE-YPWI 136 (641)
Q Consensus 69 gs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~--------~---~~~~~~~h~~~V~~v~fsp~-~~~l 136 (641)
|+ .|++|++||+.++ + .+..+.+|.+.|.+++|+|+ +.+|
T Consensus 114 gs----------------------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l 165 (434)
T 2oit_A 114 SE----------------------------YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMV 165 (434)
T ss_dssp TT----------------------------TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEE
T ss_pred cC----------------------------CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEE
Confidence 65 8999999998654 2 24556789999999999998 7899
Q ss_pred EEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeec
Q psy9327 137 LSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 137 ~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~ 201 (641)
++++.|++|++||++++.......+|...|++++|+|+|.+|++|+.||+|++||.+ ++....+
T Consensus 166 as~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~ 229 (434)
T 2oit_A 166 AVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVI 229 (434)
T ss_dssp EEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEE
T ss_pred EEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccccccc
Confidence 999999999999999998887778899999999999999999999999999999998 4433333
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.82 E-value=7.4e-18 Score=174.60 Aligned_cols=271 Identities=9% Similarity=0.052 Sum_probs=192.2
Q ss_pred EEEccCCCe-EEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceee
Q psy9327 15 LSFHPKRPW-ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRI 93 (641)
Q Consensus 15 l~fspdg~~-Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~ 93 (641)
..|.+++++ +++++.++.|.+||..+++.+..+..+..++ +++|+|+++++++++
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~----------------------- 58 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTS----------------------- 58 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEE-----------------------
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEe-----------------------
Confidence 346666665 6677789999999999998888777666677 999999999777776
Q ss_pred EEEeeCCCeEEEEECCCCee-EEEEccCCCCeEEEEEccCCCEEEEEeCCC---eEEEEECCCCeeEEEEccCCCCEEEE
Q psy9327 94 KSVLGDDYKIKVWNYKQRKC-IFTLLGHLDYIRTTFFHHEYPWILSASDDQ---TIRIWYWQSRNCICVLTGHNHYVMCA 169 (641)
Q Consensus 94 ~~~~s~Dg~I~vWD~~t~~~-~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg---~I~vWd~~~~~~i~~l~~h~~~V~sl 169 (641)
..++.|.+||..+++. ...+..+..+..+++|+|++++++++..++ .|.+||..+++.+..+..+ ....++
T Consensus 59 ----~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~ 133 (331)
T 3u4y_A 59 ----DFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGI 133 (331)
T ss_dssp ----STTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEE
T ss_pred ----CCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccce
Confidence 2588999999999987 777777777776699999999998655553 9999999999988887644 456899
Q ss_pred EEecCCCEE-EEEeCCCe-EEEEecCCCceee-----eccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCc
Q psy9327 170 QFHPTDDIV-VSASLDQT-IRVWDISGLRKKN-----VAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKME 241 (641)
Q Consensus 170 ~fsp~g~~l-vSgs~Dgt-I~IWD~~~~~~~~-----~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~ 241 (641)
+|+|+|+++ ++...++. +.+|++....... ... .+.....+. .+|--. .-+.++..++.|.+|| ....
T Consensus 134 ~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~-~spdg~--~l~v~~~~~~~v~v~d~~~~~ 209 (331)
T 3u4y_A 134 AISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFIS-GGTRPFNIT-FTPDGN--FAFVANLIGNSIGILETQNPE 209 (331)
T ss_dssp EECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEEC-SSSSEEEEE-ECTTSS--EEEEEETTTTEEEEEECSSTT
T ss_pred EECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCcccc-CCCCccceE-ECCCCC--EEEEEeCCCCeEEEEECCCCc
Confidence 999999754 55566688 9999987533221 111 111111111 011000 0134455788999999 4455
Q ss_pred c---eeeecCCcceEEEEEcCCccEEEEec-CCeEEEEEcCCCCeEeccc----------cce-----EEEEEcCcEEEE
Q psy9327 242 P---LCNIHENTRVKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIRTLD----------LPI-----YITKIKGNQVYY 302 (641)
Q Consensus 242 ~---~~~~~~~~~I~sla~~p~g~~L~t~s-~~~k~~l~~~~~g~I~~~d----------~p~-----~~~~~~g~~v~~ 302 (641)
. +..+.....+..++|+|+|.+++.++ .++.+.+|+.+++.+..+. .+. ..+..++..++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v 289 (331)
T 3u4y_A 210 NITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFI 289 (331)
T ss_dssp SCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEE
T ss_pred ccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEE
Confidence 5 66777777888999999999887665 5778999998888773211 111 245667777766
Q ss_pred Ee-CCCCeEEEEeCCcc
Q psy9327 303 LD-RECSPHVLRIDPTE 318 (641)
Q Consensus 303 ~~-~dg~i~v~~~~~~~ 318 (641)
.+ .++.+.+|++....
T Consensus 290 ~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 290 SANISRELKVFTISGKV 306 (331)
T ss_dssp EETTTTEEEEEETTSCE
T ss_pred ecCCCCcEEEEEecCCc
Confidence 55 55799999988644
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-17 Score=172.75 Aligned_cols=242 Identities=7% Similarity=0.010 Sum_probs=184.7
Q ss_pred CCCeEEEEEccCCCeEEEEeC-------CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 9 SARVKGLSFHPKRPWILSSLH-------NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~-------dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
...+..++|+|+|+++++++. ++.|.+||..+++.+..+.. ...+.+++|+|++..+++++
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~----------- 107 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGN----------- 107 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEE-----------
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEe-----------
Confidence 456889999999998888774 56899999999988877754 44578899999999666655
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCC---------eEEEEEccCCCEEEEEe--CCCeEEEEEC
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY---------IRTTFFHHEYPWILSAS--DDQTIRIWYW 150 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~---------V~~v~fsp~~~~l~sgs--~Dg~I~vWd~ 150 (641)
..++.|.+||..+++.+..+..+... +.+++|+|+++++++++ .++.|.+||.
T Consensus 108 ----------------~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~ 171 (353)
T 3vgz_A 108 ----------------TVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDG 171 (353)
T ss_dssp ----------------TTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEET
T ss_pred ----------------cCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcC
Confidence 27899999999999988888765432 78999999999777665 5889999999
Q ss_pred CCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC----CCceeeecc--cCCCceeeeeee
Q psy9327 151 QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----MGKLVLSMK--SKHPIWKYCKPV 224 (641)
Q Consensus 151 ~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~----~~~~v~s~~--~~~~v~~~~~~l 224 (641)
.+++.+..+..+...+.+++|+|+++.+++++.++.|.+||..+++....+.. +...+.++. ..... -+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~-----l~ 246 (353)
T 3vgz_A 172 GNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQR-----AF 246 (353)
T ss_dssp TTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTE-----EE
T ss_pred CCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCE-----EE
Confidence 99999988876677788999999999999999999999999999887766543 112221111 11110 02
Q ss_pred eeeCCCeeEEEecC-CCcceeeecCCcceEEEEEcCCccEEEEec-CCeEEEEEcCCCCeEe
Q psy9327 225 KYCNPKHTLHICNR-KMEPLCNIHENTRVKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIR 284 (641)
Q Consensus 225 ~s~~~d~~I~i~d~-~~~~~~~~~~~~~I~sla~~p~g~~L~t~s-~~~k~~l~~~~~g~I~ 284 (641)
.+...++.+.+||. .++.+..+....+ ..++|+|+|.+++.++ .++.+.+|+..++.+.
T Consensus 247 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 247 ITDSKAAEVLVVDTRNGNILAKVAAPES-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVV 307 (353)
T ss_dssp EEESSSSEEEEEETTTCCEEEEEECSSC-CCEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEeCCCCEEEEEECCCCcEEEEEEcCCC-ceEEECCCCCEEEEEECCCCeEEEEECCCCeEE
Confidence 33445689999994 4555555554433 5699999999777665 6889999998877643
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-17 Score=173.37 Aligned_cols=246 Identities=10% Similarity=0.148 Sum_probs=169.5
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCC-CcEEEEECc--cCc--ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHN-GVIQLWDYR--MNT--LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~d-g~I~iWD~~--~~~--~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.|...+.+++|+|+|++|++++.+ +.|.+|++. +++ .+..+..+. .+.+++|+|++.++++++
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~----------- 102 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGS----------- 102 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEE-----------
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEe-----------
Confidence 466789999999999999888876 999999997 444 334444333 788999999999887775
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEEC---CCCeeEEEEccCCCCeEEEEEccCCCEEEEEe-CCCeEEEEECCC-CeeE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNY---KQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS-DDQTIRIWYWQS-RNCI 156 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~---~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs-~Dg~I~vWd~~~-~~~i 156 (641)
..++.|.+||+ .+++....+..+ ..+.+++|+|+++++++++ .|+.|++||+.+ ++..
T Consensus 103 ----------------~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 103 ----------------YNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV 165 (343)
T ss_dssp ----------------TTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred ----------------cCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCcee
Confidence 26899999999 444555666544 4588999999999888777 899999999987 5433
Q ss_pred E----EEcc-CCCCEEEEEEecCCCEEEEE-eCCCeEEEEecCC--Cce--eee---ccC-CC--ceeeecccCCCceee
Q psy9327 157 C----VLTG-HNHYVMCAQFHPTDDIVVSA-SLDQTIRVWDISG--LRK--KNV---APG-MG--KLVLSMKSKHPIWKY 220 (641)
Q Consensus 157 ~----~l~~-h~~~V~sl~fsp~g~~lvSg-s~DgtI~IWD~~~--~~~--~~~---~~~-~~--~~v~s~~~~~~v~~~ 220 (641)
. .+.. ....+.+++|+|++.+++++ ..++.|++||+.. ++. ... .+. +. ..+..+. .+|--.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~-~s~dg~- 243 (343)
T 1ri6_A 166 AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIH-ITPDGR- 243 (343)
T ss_dssp EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEE-ECTTSS-
T ss_pred eecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceE-ECCCCC-
Confidence 2 2332 34578899999999976555 4899999999954 322 111 111 00 0111111 011000
Q ss_pred eeeeeeeCCCeeEEEecCC-----CcceeeecCCcceEEEEEcCCccEEEEec-CCeEEEEE--cCCCCeEe
Q psy9327 221 CKPVKYCNPKHTLHICNRK-----MEPLCNIHENTRVKSGAWDESGVFIYTTS-NHIKYAIV--NGDHGIIR 284 (641)
Q Consensus 221 ~~~l~s~~~d~~I~i~d~~-----~~~~~~~~~~~~I~sla~~p~g~~L~t~s-~~~k~~l~--~~~~g~I~ 284 (641)
.-+.+...++.+.+||.. ...+..+.....+.+++|+|+|.++++++ .++.+.+| +.++|..+
T Consensus 244 -~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~ 314 (343)
T 1ri6_A 244 -HLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLH 314 (343)
T ss_dssp -EEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEE
T ss_pred -EEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceee
Confidence 013355678999999944 23444444445588999999999888887 57888888 44456544
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.80 E-value=9.8e-19 Score=190.07 Aligned_cols=159 Identities=11% Similarity=0.031 Sum_probs=134.2
Q ss_pred CCCCeEEEEEccCCCeEE----EEeCCCcEEEEECccC--------cc---cccccccccCeEEEEEeCC-CCEEEEece
Q psy9327 8 KSARVKGLSFHPKRPWIL----SSLHNGVIQLWDYRMN--------TL---LEKFDEHEGPVRGICFHNQ-QPIFVSGGK 71 (641)
Q Consensus 8 H~~~V~~l~fspdg~~La----sg~~dg~I~iWD~~~~--------~~---l~~~~~h~~~V~~i~fsp~-~~~l~sgs~ 71 (641)
|.+.|.+++|+|+|++|+ +|+.|++|++||+.++ +. +..+.+|..+|.+++|+|+ +.+|++++
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s- 169 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL- 169 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE-
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE-
Confidence 456799999999999999 7888999999998765 11 3456679999999999998 78999997
Q ss_pred eeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC
Q psy9327 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151 (641)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~ 151 (641)
.||+|++||++++.......+|...|++++|+|++.+|++|+.|++|++||.+
T Consensus 170 ---------------------------~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 170 ---------------------------ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp ---------------------------TTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred ---------------------------CCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 99999999999998877778899999999999999999999999999999998
Q ss_pred CCeeEEEEccC-------CCCEEEEEEecCCCEEEE-EeCCC------eEEEEecCCC
Q psy9327 152 SRNCICVLTGH-------NHYVMCAQFHPTDDIVVS-ASLDQ------TIRVWDISGL 195 (641)
Q Consensus 152 ~~~~i~~l~~h-------~~~V~sl~fsp~g~~lvS-gs~Dg------tI~IWD~~~~ 195 (641)
++....+..| ...|.+++|++++.++++ ++.|| .+++||+++.
T Consensus 223 -~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 223 -LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp -CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred -CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 5555666544 338999999998877754 33443 3999999865
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=200.88 Aligned_cols=285 Identities=9% Similarity=0.072 Sum_probs=190.5
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccccccc---CeEEEEEeCCCCEEEEeceeeEEeeeceeeeccc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEG---PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRN 86 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~---~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~ 86 (641)
..+.+++|+|||+++++ +.||+|++||..+++....+..|.. .|.+++|||||++|++++.....
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~----------- 84 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPI----------- 84 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCC-----------
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccc-----------
Confidence 34678899999997776 7899999999999988777766665 49999999999999998610000
Q ss_pred CCcceeeEEEeeCCCeEEEEECCCCeeEEEEc---cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCC
Q psy9327 87 EPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL---GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163 (641)
Q Consensus 87 ~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~---~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~ 163 (641)
-..+.++.|.+||+.+++. ..+. +|...+..++|+|+|++|++++. +.|++||..+++.......+.
T Consensus 85 --------~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~ 154 (723)
T 1xfd_A 85 --------YQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGK 154 (723)
T ss_dssp --------SSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCB
T ss_pred --------eeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCC
Confidence 0001248899999999876 3333 35556889999999999999986 799999999988776665544
Q ss_pred CCE------------------EEEEEecCCCEEEEEeCCC----------------------------------eEEEEe
Q psy9327 164 HYV------------------MCAQFHPTDDIVVSASLDQ----------------------------------TIRVWD 191 (641)
Q Consensus 164 ~~V------------------~sl~fsp~g~~lvSgs~Dg----------------------------------tI~IWD 191 (641)
..+ .+++|+|||+.|++++.|+ +|++||
T Consensus 155 ~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d 234 (723)
T 1xfd_A 155 EGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIG 234 (723)
T ss_dssp TTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEE
T ss_pred CCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEE
Confidence 333 7899999999999988653 799999
Q ss_pred cCCCceeeeccCC------CceeeecccCCCceeee-eeeeeeCCCeeEEEecCC-Ccceeee--cCCcce----EEEEE
Q psy9327 192 ISGLRKKNVAPGM------GKLVLSMKSKHPIWKYC-KPVKYCNPKHTLHICNRK-MEPLCNI--HENTRV----KSGAW 257 (641)
Q Consensus 192 ~~~~~~~~~~~~~------~~~v~s~~~~~~v~~~~-~~l~s~~~d~~I~i~d~~-~~~~~~~--~~~~~I----~sla~ 257 (641)
+.+++....+..+ ...+.++. ..|--... ........+..|.+||.. +...... .+...+ .+++|
T Consensus 235 ~~~~~~~~~l~~~~~~~~~~~~~~~~~-~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~ 313 (723)
T 1xfd_A 235 LNGPTHDLEMMPPDDPRMREYYITMVK-WATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVF 313 (723)
T ss_dssp SSSSCCCEECCCCCCGGGSSEEEEEEE-ESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEE
T ss_pred CCCCceeEEeeCCccCCCccceeEEEE-EeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceE
Confidence 9888754444432 22332221 11111110 000112245689999943 3332222 222333 37899
Q ss_pred cCCccEEEEe--cCCe------EEEEEc-CCCCe---Eecccc---ce---EEEEEcCcEEEEEeC-C--CCeEEEEeCC
Q psy9327 258 DESGVFIYTT--SNHI------KYAIVN-GDHGI---IRTLDL---PI---YITKIKGNQVYYLDR-E--CSPHVLRIDP 316 (641)
Q Consensus 258 ~p~g~~L~t~--s~~~------k~~l~~-~~~g~---I~~~d~---p~---~~~~~~g~~v~~~~~-d--g~i~v~~~~~ 316 (641)
+|+|..|+.. ..++ ++++|+ ...+. ++.+.. .+ ..+..++..++..+. + +.+.+|.++.
T Consensus 314 spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 314 SKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp CTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred cCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 9999977754 3444 688887 45554 444321 11 246677888865554 4 7899999875
Q ss_pred c
Q psy9327 317 T 317 (641)
Q Consensus 317 ~ 317 (641)
.
T Consensus 394 ~ 394 (723)
T 1xfd_A 394 V 394 (723)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.9e-18 Score=171.26 Aligned_cols=234 Identities=8% Similarity=0.002 Sum_probs=165.5
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECcc-Cccccccccc-ccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRM-NTLLEKFDEH-EGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~-~~~l~~~~~h-~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
..+..|.+.|.+++|+|+|++|++++ ++.|.+||+.+ ++.......+ ...+.+++|+|++.++++++.
T Consensus 35 ~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~--------- 104 (297)
T 2ojh_A 35 RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDK--------- 104 (297)
T ss_dssp EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEEC---------
T ss_pred eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEe---------
Confidence 34667889999999999999999987 78999999998 7776666555 478899999999999998861
Q ss_pred eeecccCCcceeeEEEeeC--CCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEE-EEeCCCeEEEEECCC-CeeE
Q psy9327 81 ILESRNEPCLFRIKSVLGD--DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWYWQS-RNCI 156 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~--Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~-sgs~Dg~I~vWd~~~-~~~i 156 (641)
.. ...|..||..+++ ...+..+ ..+..++|+|++++++ +++.|+.+++|++.. ....
T Consensus 105 -----------------~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~ 165 (297)
T 2ojh_A 105 -----------------VEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE 165 (297)
T ss_dssp -----------------TTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE
T ss_pred -----------------CCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc
Confidence 02 2345555555555 3444434 3588999999999877 788899999998642 3345
Q ss_pred EEEccCCCCEEEEEEecCCCEEEEEe-CCCeEEEEecC-CCceeeeccCCCceeeecccCCCceeeeeeeeeeCC-----
Q psy9327 157 CVLTGHNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDIS-GLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNP----- 229 (641)
Q Consensus 157 ~~l~~h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~-~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~----- 229 (641)
..+..|...+.+++|+|++..++.++ .|+.+++|++. .......+..+...+.++.. +|--.. ++.++.
T Consensus 166 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-s~dg~~---l~~~~~~~~~~ 241 (297)
T 2ojh_A 166 TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHP-SPSGDK---VVFVSYDADVF 241 (297)
T ss_dssp EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEE-CTTSSE---EEEEEEETTCC
T ss_pred eEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEE-CCCCCE---EEEEEcCCCCC
Confidence 66777888999999999999877666 59999999986 44455555544444433221 111000 222222
Q ss_pred ------CeeEEEecCCCcc---eeee-cCCcceEEEEEcCCccEEEEecC
Q psy9327 230 ------KHTLHICNRKMEP---LCNI-HENTRVKSGAWDESGVFIYTTSN 269 (641)
Q Consensus 230 ------d~~I~i~d~~~~~---~~~~-~~~~~I~sla~~p~g~~L~t~s~ 269 (641)
+..+.+||..... +... .+...+.+++|+|+|..|++++.
T Consensus 242 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 242 DHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp SCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEE
T ss_pred cccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEe
Confidence 2679999944322 2222 34567889999999999988764
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.1e-17 Score=184.74 Aligned_cols=268 Identities=10% Similarity=0.040 Sum_probs=196.3
Q ss_pred EEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEE
Q psy9327 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKS 95 (641)
Q Consensus 16 ~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (641)
+|+|++.++++++.|++|.+||..+++.+.++..+.. +.+++|+|+++++++++
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~------------------------- 197 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIG------------------------- 197 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEE-------------------------
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEEC-------------------------
Confidence 4899999999999999999999999999988874333 89999999999999998
Q ss_pred EeeCCCeEEEEEC--CCCeeEEEEccCCCCeEEEEEcc----CCCEEEEEe-CCCeEEEEECCCCeeEEEEcc-------
Q psy9327 96 VLGDDYKIKVWNY--KQRKCIFTLLGHLDYIRTTFFHH----EYPWILSAS-DDQTIRIWYWQSRNCICVLTG------- 161 (641)
Q Consensus 96 ~~s~Dg~I~vWD~--~t~~~~~~~~~h~~~V~~v~fsp----~~~~l~sgs-~Dg~I~vWd~~~~~~i~~l~~------- 161 (641)
.|++|.+||+ .+++++.++. +...++.++|+| +++++++++ .+++|.+||..+++++.++..
T Consensus 198 ---~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~ 273 (543)
T 1nir_A 198 ---RDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDT 273 (543)
T ss_dssp ---TTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSS
T ss_pred ---CCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCc
Confidence 8899999999 8999998888 455679999999 999998888 589999999999999988864
Q ss_pred ---CCC-CEEEEEEecCCC-EEEEEeCCCeEEEEecCCCceee--eccCCCceeeecccCCCceeeeeeeeeeCCCeeEE
Q psy9327 162 ---HNH-YVMCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKN--VAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLH 234 (641)
Q Consensus 162 ---h~~-~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~~~~~~--~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~ 234 (641)
|.. .+.++.++|++. ++++...+++|.+||..+.+... .++ ++..+..+. ++|--. .-+.++..++.|.
T Consensus 274 ~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~-~spdg~--~l~va~~~~~~v~ 349 (543)
T 1nir_A 274 QTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGG-WDSSHR--YFMTAANNSNKVA 349 (543)
T ss_dssp CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEE-ECTTSC--EEEEEEGGGTEEE
T ss_pred cccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCce-ECCCCC--EEEEEecCCCeEE
Confidence 223 789999999765 56778889999999998765433 222 122221111 111000 0134455688999
Q ss_pred Eec-CCCcceeeecC-----CcceEEEEEcCC-ccEEEEec-CCeEEEEEcCCC--------CeEeccccc-----eEEE
Q psy9327 235 ICN-RKMEPLCNIHE-----NTRVKSGAWDES-GVFIYTTS-NHIKYAIVNGDH--------GIIRTLDLP-----IYIT 293 (641)
Q Consensus 235 i~d-~~~~~~~~~~~-----~~~I~sla~~p~-g~~L~t~s-~~~k~~l~~~~~--------g~I~~~d~p-----~~~~ 293 (641)
+|| .+++.+..+.. ......+ ++|+ |..++++. .++.+.+|+.+. ..++.+..+ ...+
T Consensus 350 v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~ 428 (543)
T 1nir_A 350 VIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKT 428 (543)
T ss_dssp EEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEEC
T ss_pred EEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEc
Confidence 999 45555555542 2223332 4677 66666654 578999998765 345555432 1235
Q ss_pred EEcCcEEEEEeC-------CCCeEEEEeCCcc
Q psy9327 294 KIKGNQVYYLDR-------ECSPHVLRIDPTE 318 (641)
Q Consensus 294 ~~~g~~v~~~~~-------dg~i~v~~~~~~~ 318 (641)
+.++..+++.++ +++|.+|++++.+
T Consensus 429 ~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~ 460 (543)
T 1nir_A 429 HPKSSHLYVDTTFNPDARISQSVAVFDLKNLD 460 (543)
T ss_dssp CTTCCEEEECCTTCSSHHHHTCEEEEETTCTT
T ss_pred CCCCCcEEEecCCCCCcccCceEEEEECCCCC
Confidence 677889998773 6799999999765
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=4.8e-17 Score=169.57 Aligned_cols=228 Identities=9% Similarity=0.036 Sum_probs=176.3
Q ss_pred CCeEEEEEccCCCeEEE-EeCCCcEEEEECccCcccccccccccC---------eEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 10 ARVKGLSFHPKRPWILS-SLHNGVIQLWDYRMNTLLEKFDEHEGP---------VRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 10 ~~V~~l~fspdg~~Las-g~~dg~I~iWD~~~~~~l~~~~~h~~~---------V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
..+.+++|+|+|+++++ +..++.|.+||..+++.+..+..+... +.+++|+|++.++++++.
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-------- 160 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI-------- 160 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEE--------
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEec--------
Confidence 45778999999996554 455799999999999888777654432 789999999998777651
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l 159 (641)
+.++.|.+||..+++.+..+..+...+.+++|+|++.++++++.++.|.+||..+++.+..+
T Consensus 161 ------------------~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~ 222 (353)
T 3vgz_A 161 ------------------GKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRK 222 (353)
T ss_dssp ------------------SSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred ------------------CCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEE
Confidence 15889999999999999988866667889999999999999999999999999999988777
Q ss_pred cc----CCCCEEEEEEecCCCEEEEEeC-CCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEE
Q psy9327 160 TG----HNHYVMCAQFHPTDDIVVSASL-DQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLH 234 (641)
Q Consensus 160 ~~----h~~~V~sl~fsp~g~~lvSgs~-DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~ 234 (641)
.. +...+.+++|+|+++.++.++. ++.|.+||..+++....++.....-..+...... -+.+...++.|.
T Consensus 223 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~-----l~v~~~~~~~v~ 297 (353)
T 3vgz_A 223 KLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNE-----AYVTHRQAGKVS 297 (353)
T ss_dssp ECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTE-----EEEEETTTTEEE
T ss_pred EcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCE-----EEEEECCCCeEE
Confidence 63 5667889999999997766655 5999999999988776665322111111111110 133455789999
Q ss_pred Eec-CCCcceeeecCCcceEEEEEcCCccEEEEec
Q psy9327 235 ICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTS 268 (641)
Q Consensus 235 i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s 268 (641)
+|| ..++.+..+.....+.+++|+|+|.+++.+.
T Consensus 298 ~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~ 332 (353)
T 3vgz_A 298 VIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSV 332 (353)
T ss_dssp EEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEE
T ss_pred EEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEE
Confidence 999 4566666777777889999999999887765
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.78 E-value=1e-16 Score=166.02 Aligned_cols=249 Identities=6% Similarity=0.021 Sum_probs=170.8
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeC-CCcEEEEECccCcc-cccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLH-NGVIQLWDYRMNTL-LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~-dg~I~iWD~~~~~~-l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.+..+...+ +++|+|+|+++++++. ++.|.+||..+++. ...+..+..+..+++|+|++++++++.
T Consensus 35 ~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~----------- 102 (331)
T 3u4y_A 35 QITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVT----------- 102 (331)
T ss_dssp EEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECC-----------
T ss_pred eEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEec-----------
Confidence 444555666 9999999997766665 89999999999987 777777777776699999999999654
Q ss_pred eecccCCcceeeEEEeeCC-C--eEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEE-EEEeCCCe-EEEEECCCCeeE
Q psy9327 82 LESRNEPCLFRIKSVLGDD-Y--KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWI-LSASDDQT-IRIWYWQSRNCI 156 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~D-g--~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l-~sgs~Dg~-I~vWd~~~~~~i 156 (641)
.+ + .|.+||..+++.+..+..+ ....+++|+|+++++ +++..++. |.+|++.....+
T Consensus 103 -----------------~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~ 164 (331)
T 3u4y_A 103 -----------------GLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVL 164 (331)
T ss_dssp -----------------CSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCE
T ss_pred -----------------CCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcE
Confidence 34 3 9999999999988887754 456899999999844 55566688 999998754332
Q ss_pred ----EEEccCCCCEEEEEEecCCCEE-EEEeCCCeEEEEecCCCce---eeeccCCCceeeecccCCCceeeeeeeeeeC
Q psy9327 157 ----CVLTGHNHYVMCAQFHPTDDIV-VSASLDQTIRVWDISGLRK---KNVAPGMGKLVLSMKSKHPIWKYCKPVKYCN 228 (641)
Q Consensus 157 ----~~l~~h~~~V~sl~fsp~g~~l-vSgs~DgtI~IWD~~~~~~---~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~ 228 (641)
.....+...+.+++|+|+|+++ +++..++.|++||+.+++. ...++.. ..+..+. .+|--. .-+.+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~-~spdg~--~l~v~~~ 240 (331)
T 3u4y_A 165 FDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIV-VSRDGS--TVYVLTE 240 (331)
T ss_dssp EEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEE-ECTTSS--EEEEECS
T ss_pred eecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEE-ECCCCC--EEEEEEc
Confidence 1222345668999999999865 4555789999999998887 5555432 1111111 111000 0023344
Q ss_pred CCeeEEEecCC-Ccc--eeeecC-----Cc---ceEEEEEcCCccEEEEec-CCeEEEEEcCCCCeEecc
Q psy9327 229 PKHTLHICNRK-MEP--LCNIHE-----NT---RVKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIRTL 286 (641)
Q Consensus 229 ~d~~I~i~d~~-~~~--~~~~~~-----~~---~I~sla~~p~g~~L~t~s-~~~k~~l~~~~~g~I~~~ 286 (641)
.++.|.+||.. +.. +..+.. .. ....++|+|+|.+|+.++ .++.+.+|+.....+...
T Consensus 241 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 241 STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYV 310 (331)
T ss_dssp SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred CCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccce
Confidence 67789999944 322 222211 11 124579999999887665 456888888776655433
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.4e-16 Score=164.55 Aligned_cols=260 Identities=6% Similarity=-0.040 Sum_probs=185.5
Q ss_pred CeEEEEeCCCcEEEEECccCccccccccccc--CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeC
Q psy9327 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEG--PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGD 99 (641)
Q Consensus 22 ~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~--~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 99 (641)
+++++++.+++|.+||..+++.+..+..... .+.+++|+|+++.+++++ +.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~---------------------------~~ 54 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATV---------------------------NK 54 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEE---------------------------TT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEe---------------------------CC
Confidence 4789999999999999999988877753322 578999999998765554 27
Q ss_pred CCeEEEEECCCCeeEEEEcc-C----CCCeEEEEEccCCCEEEEEe------------CCCeEEEEECCCCeeEEEEccC
Q psy9327 100 DYKIKVWNYKQRKCIFTLLG-H----LDYIRTTFFHHEYPWILSAS------------DDQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 100 Dg~I~vWD~~t~~~~~~~~~-h----~~~V~~v~fsp~~~~l~sgs------------~Dg~I~vWd~~~~~~i~~l~~h 162 (641)
++.|.+||..+++.+..+.. + ...+.+++|+|+++++++++ .++.|.+||..+++.+..+..
T Consensus 55 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~- 133 (337)
T 1pby_B 55 SESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA- 133 (337)
T ss_dssp TTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-
T ss_pred CCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-
Confidence 89999999999998877753 2 22567899999999888886 579999999999988877764
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCC--ceeeecccCCC-ceeeeeeeeeeCCC---------
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG--KLVLSMKSKHP-IWKYCKPVKYCNPK--------- 230 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~--~~v~s~~~~~~-v~~~~~~l~s~~~d--------- 230 (641)
...+.+++|+|++++++++ ++.|.+||+.+++....++... ..+ ....... ++ .++..+
T Consensus 134 ~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~------~~~~~~~~~~~~~~~ 204 (337)
T 1pby_B 134 PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAET-YAQPDVLAVW------NQHESSGVMATPFYT 204 (337)
T ss_dssp CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTT-BCCCBCCCCC------CCCTTTTEEEEEEEE
T ss_pred CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCc-eeCCCccEEe------eeccCCCceeeeeec
Confidence 4567889999999988877 6899999999988776554321 111 0000000 00 011111
Q ss_pred --------------eeEEEecCCCcceeee---cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE-ecccc---c
Q psy9327 231 --------------HTLHICNRKMEPLCNI---HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII-RTLDL---P 289 (641)
Q Consensus 231 --------------~~I~i~d~~~~~~~~~---~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I-~~~d~---p 289 (641)
..+.+||......... .....+.+++|+|+|.+++++ ++.+.+|+.+++.+ ..+.. |
T Consensus 205 ~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~ 282 (337)
T 1pby_B 205 ARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSY 282 (337)
T ss_dssp EBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCC
T ss_pred cccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCce
Confidence 1578888443322211 234567889999999999988 68899999887754 33322 2
Q ss_pred eE-EEEEcCcEEEEEeCCCCeEEEEeCCcchh
Q psy9327 290 IY-ITKIKGNQVYYLDRECSPHVLRIDPTEFK 320 (641)
Q Consensus 290 ~~-~~~~~g~~v~~~~~dg~i~v~~~~~~~~~ 320 (641)
.. .+..++..++..+.++.+.+|+..+.+..
T Consensus 283 ~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 283 YSVNVSTDGSTVWLGGALGDLAAYDAETLEKK 314 (337)
T ss_dssp CEEEECTTSCEEEEESBSSEEEEEETTTCCEE
T ss_pred eeEEECCCCCEEEEEcCCCcEEEEECcCCcEE
Confidence 11 23456788888888999999998876543
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.76 E-value=5.6e-17 Score=182.47 Aligned_cols=266 Identities=6% Similarity=-0.113 Sum_probs=183.4
Q ss_pred CCCeEEEEEccCCCeEEEEeC-CCcEEEEECccCcccccccccc-cCeEEEEEeCCCCEEEEece----e--eEEee---
Q psy9327 9 SARVKGLSFHPKRPWILSSLH-NGVIQLWDYRMNTLLEKFDEHE-GPVRGICFHNQQPIFVSGGK----M--IVMAY--- 77 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~-dg~I~iWD~~~~~~l~~~~~h~-~~V~~i~fsp~~~~l~sgs~----~--~~~~~--- 77 (641)
..+|.+++|+|||++||+++. ||+++||++..++. .++..|. ..+.+++|+|+ ..+++++. . .++.+
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~-~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET-VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE-EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc-EeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 568999999999999998887 99999999876654 4444444 68999999999 66665542 1 12112
Q ss_pred -eceeeec---------ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC----C
Q psy9327 78 -QGCILES---------RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD----Q 143 (641)
Q Consensus 78 -~~~~~~~---------~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D----g 143 (641)
.+..... ...|+......+.+.++.+.+||+.+++.......+ . .+++|+|||+++++++.| +
T Consensus 99 ~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~ 175 (582)
T 3o4h_A 99 RPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRV 175 (582)
T ss_dssp STTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEE
T ss_pred CCCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCe
Confidence 1211111 112223223334444455569999999866555433 3 789999999999988877 7
Q ss_pred eEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCC--eEEEEecCCCceeeeccCCCceeeecccCCC---ce
Q psy9327 144 TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQ--TIRVWDISGLRKKNVAPGMGKLVLSMKSKHP---IW 218 (641)
Q Consensus 144 ~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~Dg--tI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~---v~ 218 (641)
.|++||+.+++.. .+.+|.+.+.+++|+|||++|++++.|+ .|++||+.+++.. .+.++...+.+.....+ .|
T Consensus 176 ~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 253 (582)
T 3o4h_A 176 SLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGY 253 (582)
T ss_dssp EEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEE
T ss_pred EEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeE
Confidence 8999999988754 6788999999999999999999888898 9999999998877 66555444332220000 01
Q ss_pred eeee-eeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEecCC---eEEEEEcCCCCeEecc
Q psy9327 219 KYCK-PVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNH---IKYAIVNGDHGIIRTL 286 (641)
Q Consensus 219 ~~~~-~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~---~k~~l~~~~~g~I~~~ 286 (641)
.... -+.++..++.+++|+. +.... .....+.+++|+ +|.++++++.+ ..+++++.+. .++.+
T Consensus 254 spdg~~~~~~~~~g~~~l~~~-g~~~~--~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 254 LPDGRLAVVARREGRSAVFID-GERVE--APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp CTTSCEEEEEEETTEEEEEET-TEEEC--CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC-EEECC
T ss_pred cCCCcEEEEEEcCCcEEEEEE-CCeec--cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC-ceEEE
Confidence 1111 1445667889999997 44332 234678899999 88888887754 5677777654 55444
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=7.5e-17 Score=185.45 Aligned_cols=275 Identities=9% Similarity=0.057 Sum_probs=187.8
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
..|.+++|||| ..++.+. ++.|++||+.+++.. .+..+.+.+.+++|+|||++++++
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~SpdG~~la~~-------------------- 138 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVT-YLFDTNEETASLDFSPVGDRVAYV-------------------- 138 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEE-EEECCTTCCTTCEECTTSSEEEEE--------------------
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceE-EccCCcccccCCcCCCCCCEEEEE--------------------
Confidence 56999999999 6666553 599999999888654 344567788999999999999996
Q ss_pred ceeeEEEeeCCCeEEEEECCC-----CeeEEEEccCCCC--------------eEEEEEccCCCEEEEEe----------
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQ-----RKCIFTLLGHLDY--------------IRTTFFHHEYPWILSAS---------- 140 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t-----~~~~~~~~~h~~~--------------V~~v~fsp~~~~l~sgs---------- 140 (641)
.|+.|++||+.+ ++.......+... +.+++|+|||++|++++
T Consensus 139 ---------~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~ 209 (706)
T 2z3z_A 139 ---------RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTP 209 (706)
T ss_dssp ---------ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEE
T ss_pred ---------ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEE
Confidence 579999999998 8766554444443 48899999999999987
Q ss_pred -----------------------CCCeEEEEECCCCeeEEEEc--cCCCCEEEEEEecCCCEEEEEeCCC-----eEEEE
Q psy9327 141 -----------------------DDQTIRIWYWQSRNCICVLT--GHNHYVMCAQFHPTDDIVVSASLDQ-----TIRVW 190 (641)
Q Consensus 141 -----------------------~Dg~I~vWd~~~~~~i~~l~--~h~~~V~sl~fsp~g~~lvSgs~Dg-----tI~IW 190 (641)
.+..|++||+.+++...... .|...+.+++|+|+|+.|++++.|+ +|++|
T Consensus 210 ~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~ 289 (706)
T 2z3z_A 210 IVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAY 289 (706)
T ss_dssp EEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEE
T ss_pred eeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEE
Confidence 45789999999988654442 5778899999999999999988776 99999
Q ss_pred ecCCCceeee-ccC-CCceeeecccCCCceee--ee-eeeeeCCCeeEEEec--CCCcceeeecC-CcceEE-EEEcCCc
Q psy9327 191 DISGLRKKNV-APG-MGKLVLSMKSKHPIWKY--CK-PVKYCNPKHTLHICN--RKMEPLCNIHE-NTRVKS-GAWDESG 261 (641)
Q Consensus 191 D~~~~~~~~~-~~~-~~~~v~s~~~~~~v~~~--~~-~l~s~~~d~~I~i~d--~~~~~~~~~~~-~~~I~s-la~~p~g 261 (641)
|..+++.... ... ....+. ....+.|.. .. -+.++..++.+.+|. .....+..+.. ...+.+ ++|+|+|
T Consensus 290 d~~~g~~~~~~~~~~~~~~~~--~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg 367 (706)
T 2z3z_A 290 DAETGRFVRTLFVETDKHYVE--PLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKG 367 (706)
T ss_dssp ETTTCCEEEEEEEEECSSCCC--CCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTS
T ss_pred ECCCCceeeEEEEccCCCeEC--ccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCC
Confidence 9998833322 211 111110 001112221 11 134555677777776 34444555443 445666 7999999
Q ss_pred cEEEEecC-C----eEEEEEcCCCCeEeccccc--eE--EEEEcCcEEEEEe-CC---CCeEEEEeCCcc
Q psy9327 262 VFIYTTSN-H----IKYAIVNGDHGIIRTLDLP--IY--ITKIKGNQVYYLD-RE---CSPHVLRIDPTE 318 (641)
Q Consensus 262 ~~L~t~s~-~----~k~~l~~~~~g~I~~~d~p--~~--~~~~~g~~v~~~~-~d---g~i~v~~~~~~~ 318 (641)
..|+.++. + ..++.++.+++.++.+... +. .+..++..++... .+ +.+.+|+.++++
T Consensus 368 ~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 368 TRLYFESTEASPLERHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp SEEEEEESSSCTTCBEEEEEETTCCCCEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred CEEEEEecCCCCceEEEEEEEcCCCCceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 88876553 3 3788888777665544321 21 2344566665443 22 447788877654
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.9e-16 Score=163.99 Aligned_cols=261 Identities=11% Similarity=0.114 Sum_probs=172.7
Q ss_pred eEEEEeCCCcEEEEECc-cC--cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeC
Q psy9327 23 WILSSLHNGVIQLWDYR-MN--TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGD 99 (641)
Q Consensus 23 ~Lasg~~dg~I~iWD~~-~~--~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 99 (641)
++++++.|+.|++||+. ++ +.+.. ..+...+.+++|+|+++++++++ ..
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~---------------------------~~ 58 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGV---------------------------RP 58 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTTSSEEEEEE---------------------------TT
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeee-EecCCCCceEEECCCCCEEEEee---------------------------cC
Confidence 34455789999999985 33 22333 25777899999999999888887 14
Q ss_pred CCeEEEEECC--CCe--eEEEEccCCCCeEEEEEccCCCEEEEEe-CCCeEEEEEC---CCCeeEEEEccCCCCEEEEEE
Q psy9327 100 DYKIKVWNYK--QRK--CIFTLLGHLDYIRTTFFHHEYPWILSAS-DDQTIRIWYW---QSRNCICVLTGHNHYVMCAQF 171 (641)
Q Consensus 100 Dg~I~vWD~~--t~~--~~~~~~~h~~~V~~v~fsp~~~~l~sgs-~Dg~I~vWd~---~~~~~i~~l~~h~~~V~sl~f 171 (641)
++.|.+|++. +++ .+..+..+. .+..++|+|+++++++++ .++.|.+||+ .+.+.+..+..+ ..+.+++|
T Consensus 59 ~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~ 136 (343)
T 1ri6_A 59 EFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANI 136 (343)
T ss_dssp TTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEE
T ss_pred CCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEE
Confidence 4999999998 554 344555444 788999999999776665 4889999999 444555555544 45889999
Q ss_pred ecCCCEEEEEe-CCCeEEEEecCC-Cceeee----cc-CCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCC---c
Q psy9327 172 HPTDDIVVSAS-LDQTIRVWDISG-LRKKNV----AP-GMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKM---E 241 (641)
Q Consensus 172 sp~g~~lvSgs-~DgtI~IWD~~~-~~~~~~----~~-~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~---~ 241 (641)
+|+++.+++++ .|+.|++||+.+ ++.... .. ..+..+..+. .+|--.. -+.++..++.+.+|+... .
T Consensus 137 s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~pdg~~--l~~~~~~~~~i~~~~~~~~~g~ 213 (343)
T 1ri6_A 137 SPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMV-FHPNEQY--AYCVNELNSSVDVWELKDPHGN 213 (343)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEE-ECTTSSE--EEEEETTTTEEEEEESSCTTSC
T ss_pred CCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEE-ECCCCCE--EEEEeCCCCEEEEEEecCCCCc
Confidence 99999888877 899999999987 543221 11 1122222211 1111000 123445788999999532 1
Q ss_pred c--eeeec---C----CcceEEEEEcCCccEEEEe-cCCeEEEEEcCC--CCeEecc------ccce-EEEEEcCcEEEE
Q psy9327 242 P--LCNIH---E----NTRVKSGAWDESGVFIYTT-SNHIKYAIVNGD--HGIIRTL------DLPI-YITKIKGNQVYY 302 (641)
Q Consensus 242 ~--~~~~~---~----~~~I~sla~~p~g~~L~t~-s~~~k~~l~~~~--~g~I~~~------d~p~-~~~~~~g~~v~~ 302 (641)
. ...+. . ...+.+++|+|+|.+++.+ ..++.+.+|+.+ .+..+.+ ..|. ..+..++..++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 293 (343)
T 1ri6_A 214 IECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIA 293 (343)
T ss_dssp CEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEE
T ss_pred EEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEE
Confidence 1 22221 1 2356689999999888754 478889999876 3433221 1121 224456787888
Q ss_pred Ee-CCCCeEEEEeCC
Q psy9327 303 LD-RECSPHVLRIDP 316 (641)
Q Consensus 303 ~~-~dg~i~v~~~~~ 316 (641)
.+ .++.+.+|.++.
T Consensus 294 ~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 294 AGQKSHHISVYEIVG 308 (343)
T ss_dssp ECTTTCEEEEEEEET
T ss_pred ecCCCCeEEEEEEcC
Confidence 77 579999998874
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.4e-16 Score=164.81 Aligned_cols=247 Identities=11% Similarity=0.052 Sum_probs=165.4
Q ss_pred cCCCCeEEEEEccCCCeEEEEeC---CCcEEEEECccCc--ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLH---NGVIQLWDYRMNT--LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~---dg~I~iWD~~~~~--~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.+...+..++|+|+|+ |++++. ++.|.+||+.+++ .+..+..+...+.+++|+|+++++++++
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~----------- 104 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSAN----------- 104 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEE-----------
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEe-----------
Confidence 4556778899999999 555544 6899999997665 4445556778889999999999888876
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECC-CC--eeEEEEcc---------CCCCeEEEEEccCCCEEEEEeCCCeEEEEE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYK-QR--KCIFTLLG---------HLDYIRTTFFHHEYPWILSASDDQTIRIWY 149 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~-t~--~~~~~~~~---------h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd 149 (641)
..++.|.+||+. ++ +.+..+.. +...+.+++|+|++++++++..++.|.+||
T Consensus 105 ----------------~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~ 168 (347)
T 3hfq_A 105 ----------------YHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYN 168 (347)
T ss_dssp ----------------TTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEE
T ss_pred ----------------CCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEE
Confidence 268999999996 33 33333322 123488999999999777777889999999
Q ss_pred CC-CCeeE--EEEccC-CCCEEEEEEecCCCEEEE-EeCCCeEEEEecCC--Ccee--eeccCCC------ceeeecccC
Q psy9327 150 WQ-SRNCI--CVLTGH-NHYVMCAQFHPTDDIVVS-ASLDQTIRVWDISG--LRKK--NVAPGMG------KLVLSMKSK 214 (641)
Q Consensus 150 ~~-~~~~i--~~l~~h-~~~V~sl~fsp~g~~lvS-gs~DgtI~IWD~~~--~~~~--~~~~~~~------~~v~s~~~~ 214 (641)
+. +++.. ..+..+ ...+..++|+|+|+++++ +..++.|.+||+.. ++.. ....... ..+..+.
T Consensus 169 ~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~-- 246 (347)
T 3hfq_A 169 VSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIR-- 246 (347)
T ss_dssp ECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEE--
T ss_pred ECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEE--
Confidence 98 55432 222322 336788999999996555 56789999999874 3321 1111110 1111111
Q ss_pred CCceeeeee--eeeeCCCeeEEEecCC----CcceeeecC-CcceEEEEEcCCccEEEEecC-CeEEEEE--cCCCCeEe
Q psy9327 215 HPIWKYCKP--VKYCNPKHTLHICNRK----MEPLCNIHE-NTRVKSGAWDESGVFIYTTSN-HIKYAIV--NGDHGIIR 284 (641)
Q Consensus 215 ~~v~~~~~~--l~s~~~d~~I~i~d~~----~~~~~~~~~-~~~I~sla~~p~g~~L~t~s~-~~k~~l~--~~~~g~I~ 284 (641)
|..... +.+...++.|.+|+.. ...+..+.. ...+..++|+|+|.+|++++. ++.+.+| +.++|.+.
T Consensus 247 ---~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 247 ---LSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp ---ECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred ---ECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 111111 2344567899999943 233444443 456889999999999988874 4777777 66667665
Q ss_pred cc
Q psy9327 285 TL 286 (641)
Q Consensus 285 ~~ 286 (641)
.+
T Consensus 324 ~~ 325 (347)
T 3hfq_A 324 LL 325 (347)
T ss_dssp EE
T ss_pred ec
Confidence 33
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-16 Score=166.18 Aligned_cols=158 Identities=7% Similarity=-0.025 Sum_probs=125.2
Q ss_pred EEEEccCCCeEEEEeCCCcEEEEECccCcccccccccc-cCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCccee
Q psy9327 14 GLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHE-GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFR 92 (641)
Q Consensus 14 ~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~-~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~ 92 (641)
++++++++.++++++.+++|.+||..+++.+..+..+. ..+.+++|+|++..+++++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~---------------------- 61 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLN---------------------- 61 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEE----------------------
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEe----------------------
Confidence 56788899999999999999999999998887776443 2578899999998665544
Q ss_pred eEEEeeCCCeEEEEECCCCeeEEEEccCC------CCeEEEEEccCCCEEEEEeCC------------CeEEEEECCCC-
Q psy9327 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHL------DYIRTTFFHHEYPWILSASDD------------QTIRIWYWQSR- 153 (641)
Q Consensus 93 ~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~------~~V~~v~fsp~~~~l~sgs~D------------g~I~vWd~~~~- 153 (641)
..++.|.+||..+++.+..+..+. ..+.+++|+|+++++++++.+ +.|.+||+.++
T Consensus 62 -----~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 62 -----NHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp -----TTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred -----CCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 278999999999999887776432 237889999999999988865 89999999874
Q ss_pred --eeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 154 --NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 154 --~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
+.+..+. +...+.+++|+|+|+ +++++. .|.+||..+++....++
T Consensus 137 ~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~ 183 (349)
T 1jmx_B 137 EAKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALP 183 (349)
T ss_dssp GBCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEEC
T ss_pred ccceeeecc-CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceecccc
Confidence 3334444 344688999999999 555544 49999999988776654
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-16 Score=184.99 Aligned_cols=275 Identities=8% Similarity=-0.019 Sum_probs=179.4
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccC----------------eEEEEEeCCCCEE
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGP----------------VRGICFHNQQPIF 66 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~----------------V~~i~fsp~~~~l 66 (641)
..+..|...+.+++|||||++|++++ ++.|.+||+.+++.......+... +.+++|||||++|
T Consensus 145 ~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l 223 (741)
T 2ecf_A 145 RQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAI 223 (741)
T ss_dssp CBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCE
T ss_pred EEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEE
Confidence 45677888999999999999999887 468999999888765544434332 4789999999999
Q ss_pred EEeceee--EEeeeceeeecccCCcc-----eeeEEEeeC--CCeEEEEECCC-CeeEEEEc--cCCCCeEEEEEccCCC
Q psy9327 67 VSGGKMI--VMAYQGCILESRNEPCL-----FRIKSVLGD--DYKIKVWNYKQ-RKCIFTLL--GHLDYIRTTFFHHEYP 134 (641)
Q Consensus 67 ~sgs~~~--~~~~~~~~~~~~~~~~~-----~~~~~~~s~--Dg~I~vWD~~t-~~~~~~~~--~h~~~V~~v~fsp~~~ 134 (641)
++++... ...+. .....|.. ..+...+.. ...|.+||+.+ ++...... .|...+..++| |+|+
T Consensus 224 ~~~~~d~~~~~~~~----~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~ 298 (741)
T 2ecf_A 224 AYARIDESPVPVQK----RYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQ 298 (741)
T ss_dssp EEEEEECTTSCEEE----EEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETT
T ss_pred EEEEEcCCCCceEe----cCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCC
Confidence 9886210 00000 00000000 000000111 12788899998 87655443 47889999999 9999
Q ss_pred EEEEEeC-----CCeEEEEECCCCeeEEEEccCCC----CEEEEEEecCCCEEEEEeCCCeEEEEecC-CCceeeeccCC
Q psy9327 135 WILSASD-----DQTIRIWYWQSRNCICVLTGHNH----YVMCAQFHPTDDIVVSASLDQTIRVWDIS-GLRKKNVAPGM 204 (641)
Q Consensus 135 ~l~sgs~-----Dg~I~vWd~~~~~~i~~l~~h~~----~V~sl~fsp~g~~lvSgs~DgtI~IWD~~-~~~~~~~~~~~ 204 (641)
+|++++. +..|++||..++++...+..|.. .+.+++|+|+|+++++++.||.+++|.+. .+. ...+..+
T Consensus 299 ~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~ 377 (741)
T 2ecf_A 299 HLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHG 377 (741)
T ss_dssp EEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCS
T ss_pred EEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeec
Confidence 9987654 67899999999988777766553 45689999999999999999988888775 333 5555544
Q ss_pred CceeeecccCCCceeeeeeeeeeCCCe--eEEEecC--CCcceeeecCCcceEEEEEcCCccEEEEecCC----eEEEEE
Q psy9327 205 GKLVLSMKSKHPIWKYCKPVKYCNPKH--TLHICNR--KMEPLCNIHENTRVKSGAWDESGVFIYTTSNH----IKYAIV 276 (641)
Q Consensus 205 ~~~v~s~~~~~~v~~~~~~l~s~~~d~--~I~i~d~--~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~----~k~~l~ 276 (641)
...+.+.....|--.. -+.++..++ .+++|+. .+.....+.....+.+++|+|+|.+++....+ ..+.++
T Consensus 378 ~~~v~~~~~~s~dg~~--l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~ 455 (741)
T 2ecf_A 378 NWSVDELLAVDEKAGL--AYFRAGIESARESQIYAVPLQGGQPQRLSKAPGMHSASFARNASVYVDSWSNNSTPPQIELF 455 (741)
T ss_dssp SSCEEEEEEEETTTTE--EEEEECSSCTTCBEEEEEETTCCCCEECCCSCSEEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred ceEEEeEeEEeCCCCE--EEEEEeCCCCceEEEEEEEcCCCCeeecccCCCceEEEECCCCCEEEEEecCCCCCCeEEEE
Confidence 3333322111110000 022333444 7888873 34445555556678899999999988866432 567777
Q ss_pred cCCCCeEecc
Q psy9327 277 NGDHGIIRTL 286 (641)
Q Consensus 277 ~~~~g~I~~~ 286 (641)
+.+.+.++.+
T Consensus 456 ~~~~~~~~~l 465 (741)
T 2ecf_A 456 RANGEKIATL 465 (741)
T ss_dssp ETTSCEEECS
T ss_pred EcCCCeEEEe
Confidence 7666655544
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3.1e-16 Score=180.31 Aligned_cols=278 Identities=9% Similarity=0.019 Sum_probs=178.6
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECcc-----CcccccccccccC--------------eEEEEEeCCCC
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRM-----NTLLEKFDEHEGP--------------VRGICFHNQQP 64 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~-----~~~l~~~~~h~~~--------------V~~i~fsp~~~ 64 (641)
.+..+.+.+.+++|||||++|+++ .|+.|.+||+.+ ++.......+... +.+++|+|||+
T Consensus 115 ~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~ 193 (706)
T 2z3z_A 115 YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGS 193 (706)
T ss_dssp EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSS
T ss_pred EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCC
Confidence 445567788999999999999985 679999999998 7665444434333 48999999999
Q ss_pred EEEEeceeeEEeeeceeeecc-cCCc--ceeeEE--EeeCCCeEEEEECCCCeeEEEEc--cCCCCeEEEEEccCCCEEE
Q psy9327 65 IFVSGGKMIVMAYQGCILESR-NEPC--LFRIKS--VLGDDYKIKVWNYKQRKCIFTLL--GHLDYIRTTFFHHEYPWIL 137 (641)
Q Consensus 65 ~l~sgs~~~~~~~~~~~~~~~-~~~~--~~~~~~--~~s~Dg~I~vWD~~t~~~~~~~~--~h~~~V~~v~fsp~~~~l~ 137 (641)
+|++++............... ..+. ...+.. ....+..|.+||+.+++...... .|...+..++|+|++++++
T Consensus 194 ~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 273 (706)
T 2z3z_A 194 CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILY 273 (706)
T ss_dssp EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEE
T ss_pred EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEE
Confidence 999886100000000000000 0000 000000 11245689999999998655442 4778899999999999999
Q ss_pred EEeCCC-----eEEEEECCCCeeEEEEc--cCCC---CEEEEEEec--CCCEEEEEeCCCeEEEEecC-CCceeeeccCC
Q psy9327 138 SASDDQ-----TIRIWYWQSRNCICVLT--GHNH---YVMCAQFHP--TDDIVVSASLDQTIRVWDIS-GLRKKNVAPGM 204 (641)
Q Consensus 138 sgs~Dg-----~I~vWd~~~~~~i~~l~--~h~~---~V~sl~fsp--~g~~lvSgs~DgtI~IWD~~-~~~~~~~~~~~ 204 (641)
+++.|+ .|++||..+++....+. .+.. .+.++.|+| +|.++++++.|+.+++|++. ++.....+..+
T Consensus 274 ~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~ 353 (706)
T 2z3z_A 274 VAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKG 353 (706)
T ss_dssp EEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCS
T ss_pred EEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCC
Confidence 988775 99999999984333332 2222 246789999 99999999999999999886 55555555544
Q ss_pred CceeeecccCCCceeeeeeeeeeCCCe----eEEEecCCCcceeeecCCcceEEEEEcCCccEEEEecCC----eEEEEE
Q psy9327 205 GKLVLSMKSKHPIWKYCKPVKYCNPKH----TLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNH----IKYAIV 276 (641)
Q Consensus 205 ~~~v~s~~~~~~v~~~~~~l~s~~~d~----~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~----~k~~l~ 276 (641)
...+.+.....|--.. -+.++..++ .|..||........+.+...+.+++|+|+|.+++.+..+ ..+.+|
T Consensus 354 ~~~v~~~~~~spdg~~--l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~ 431 (706)
T 2z3z_A 354 EWEVTNFAGFDPKGTR--LYFESTEASPLERHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVT 431 (706)
T ss_dssp SSCEEEEEEECTTSSE--EEEEESSSCTTCBEEEEEETTCCCCEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEE
T ss_pred CeEEEeeeEEcCCCCE--EEEEecCCCCceEEEEEEEcCCCCceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEE
Confidence 3333321111111000 012233333 667777444445555566778999999999988766432 568899
Q ss_pred cCCCCeEe
Q psy9327 277 NGDHGIIR 284 (641)
Q Consensus 277 ~~~~g~I~ 284 (641)
+.+++...
T Consensus 432 d~~~~~~~ 439 (706)
T 2z3z_A 432 NIGKGSHT 439 (706)
T ss_dssp ESSSCEEE
T ss_pred ECCCCeEe
Confidence 87777633
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.73 E-value=8.3e-17 Score=185.41 Aligned_cols=244 Identities=11% Similarity=0.089 Sum_probs=169.2
Q ss_pred eeccCCC---CeEEEEEccCCCeEEEEeCC---------CcEEEEECccCcc--cccccccccCeEEEEEeCCCCEEEEe
Q psy9327 4 KFETKSA---RVKGLSFHPKRPWILSSLHN---------GVIQLWDYRMNTL--LEKFDEHEGPVRGICFHNQQPIFVSG 69 (641)
Q Consensus 4 ~~~~H~~---~V~~l~fspdg~~Lasg~~d---------g~I~iWD~~~~~~--l~~~~~h~~~V~~i~fsp~~~~l~sg 69 (641)
.+.+|.. .|.+++|||||++|++++.+ +.+.+||+.+++. +.....|...+..++|||||++|+.+
T Consensus 52 ~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~ 131 (723)
T 1xfd_A 52 LIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFI 131 (723)
T ss_dssp EECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEE
T ss_pred EeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEE
Confidence 3445554 49999999999999999874 7888999998875 33333455668999999999999998
Q ss_pred ceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCe------------------EEEEEcc
Q psy9327 70 GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYI------------------RTTFFHH 131 (641)
Q Consensus 70 s~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V------------------~~v~fsp 131 (641)
+ ++.|++||..+++.......+...+ .+++|+|
T Consensus 132 ~-----------------------------~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp 182 (723)
T 1xfd_A 132 F-----------------------------ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP 182 (723)
T ss_dssp E-----------------------------TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT
T ss_pred E-----------------------------CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECC
Confidence 6 4799999999988777666554433 7899999
Q ss_pred CCCEEEEEeCCC----------------------------------eEEEEECCCCeeEEEEccC------CCCEEEEEE
Q psy9327 132 EYPWILSASDDQ----------------------------------TIRIWYWQSRNCICVLTGH------NHYVMCAQF 171 (641)
Q Consensus 132 ~~~~l~sgs~Dg----------------------------------~I~vWd~~~~~~i~~l~~h------~~~V~sl~f 171 (641)
||++|++++.|+ +|++||+.++++...+..| ...+.+++|
T Consensus 183 Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 262 (723)
T 1xfd_A 183 DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKW 262 (723)
T ss_dssp TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEE
T ss_pred CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEE
Confidence 999999887653 8999999988866666654 678999999
Q ss_pred ecCCCEEEEEeC----CCeEEEEecCCCceeeeccCC-CceeeecccCCCceeeeee-ee--eeCCCe------eEEEec
Q psy9327 172 HPTDDIVVSASL----DQTIRVWDISGLRKKNVAPGM-GKLVLSMKSKHPIWKYCKP-VK--YCNPKH------TLHICN 237 (641)
Q Consensus 172 sp~g~~lvSgs~----DgtI~IWD~~~~~~~~~~~~~-~~~v~s~~~~~~v~~~~~~-l~--s~~~d~------~I~i~d 237 (641)
+|||+++++.+. +..|++||+.+++.......+ ...+.. ....+.|..... ++ +...++ .+.+||
T Consensus 263 SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 263 ATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHR-QNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp SSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCC-CCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred eCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEec-cCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 999998877653 368999999988766554321 111110 001223322221 22 123344 577787
Q ss_pred -CCCcc---eeeecC-CcceEE-EEEcCCccEEEEecCC---eEEEEEc
Q psy9327 238 -RKMEP---LCNIHE-NTRVKS-GAWDESGVFIYTTSNH---IKYAIVN 277 (641)
Q Consensus 238 -~~~~~---~~~~~~-~~~I~s-la~~p~g~~L~t~s~~---~k~~l~~ 277 (641)
..... ...+.. ...+.. ++|+|+|..|+..+.+ +...+|.
T Consensus 342 ~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 390 (723)
T 1xfd_A 342 SQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYS 390 (723)
T ss_dssp SSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEE
T ss_pred ccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEE
Confidence 33333 334432 344554 6999999999866544 4555554
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.9e-16 Score=159.60 Aligned_cols=221 Identities=7% Similarity=-0.047 Sum_probs=155.9
Q ss_pred EEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEE
Q psy9327 26 SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKV 105 (641)
Q Consensus 26 sg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~v 105 (641)
.++.|++|++||..+++.. .+..|.+.|.+++|+|+++++++++ ++.|.+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-----------------------------~~~i~~ 66 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-----------------------------EGLLYR 66 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-----------------------------TTEEEE
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-----------------------------CCeEEE
Confidence 3457899999999988765 4557899999999999999999974 789999
Q ss_pred EECCC-CeeEEEEccC-CCCeEEEEEccCCCEEEEEe--CCCeEEEE--ECCCCeeEEEEccCCCCEEEEEEecCCCEEE
Q psy9327 106 WNYKQ-RKCIFTLLGH-LDYIRTTFFHHEYPWILSAS--DDQTIRIW--YWQSRNCICVLTGHNHYVMCAQFHPTDDIVV 179 (641)
Q Consensus 106 WD~~t-~~~~~~~~~h-~~~V~~v~fsp~~~~l~sgs--~Dg~I~vW--d~~~~~~i~~l~~h~~~V~sl~fsp~g~~lv 179 (641)
||+.+ ++.......| ...+.+++|+|+++++++++ .++...+| +..++. ...+..+ ..+.+++|+|+++.++
T Consensus 67 ~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~ 144 (297)
T 2ojh_A 67 LSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFT 144 (297)
T ss_dssp EESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEE
T ss_pred EeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEE
Confidence 99999 8877766666 47789999999999999998 33455555 545554 3444434 3589999999999877
Q ss_pred -EEeCCCeEEEEecC--CCceeeeccCCCceeeecccCCCceeeeeeee-eeCCCeeEEEecC--CCcceeeec-CCcce
Q psy9327 180 -SASLDQTIRVWDIS--GLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVK-YCNPKHTLHICNR--KMEPLCNIH-ENTRV 252 (641)
Q Consensus 180 -Sgs~DgtI~IWD~~--~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~-s~~~d~~I~i~d~--~~~~~~~~~-~~~~I 252 (641)
+++.|+.+++|++. ++.. ..+..+...+.++.. +|--. .++ ++..++.+.+|+. .......+. +...+
T Consensus 145 ~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~-s~dg~---~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 219 (297)
T 2ojh_A 145 YCGIRDQVFDIYSMDIDSGVE-TRLTHGEGRNDGPDY-SPDGR---WIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGD 219 (297)
T ss_dssp EEEEETTEEEEEEEETTTCCE-EECCCSSSCEEEEEE-CTTSS---EEEEEECTTSSCEEEEEETTSSCEEECCCCSEEE
T ss_pred EEECCCCceEEEEEECCCCcc-eEcccCCCccccceE-CCCCC---EEEEEecCCCCccEEEECCCCCCcEEEecCCccc
Confidence 78899999999964 3332 333333333333221 11000 022 3335777888872 344444444 35678
Q ss_pred EEEEEcCCccEEEEecCC-----------eEEEEEcCCCCeE
Q psy9327 253 KSGAWDESGVFIYTTSNH-----------IKYAIVNGDHGII 283 (641)
Q Consensus 253 ~sla~~p~g~~L~t~s~~-----------~k~~l~~~~~g~I 283 (641)
.+++|+|+|.+|+.++.+ ..+++|+.+++..
T Consensus 220 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 220 WFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp EEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred CCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 899999999999888754 6788898776643
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=4.1e-16 Score=187.68 Aligned_cols=297 Identities=10% Similarity=0.018 Sum_probs=208.5
Q ss_pred CCCCeEEEEEc-cCCCeEEEEeCCCcEEEEECccCccccccccccc-CeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 8 KSARVKGLSFH-PKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEG-PVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 8 H~~~V~~l~fs-pdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~-~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
|.+.+.+++|| |||+++++++ ++.|.+|+...++.. .+..|.+ .+.+++|+ ++..+++++
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s--------------- 355 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGT--------------- 355 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEE---------------
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEE---------------
Confidence 55679999999 9999999888 789999999877644 3556777 89999999 999999987
Q ss_pred cCCcceeeEEEeeCCCeEE-EEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCC
Q psy9327 86 NEPCLFRIKSVLGDDYKIK-VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNH 164 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~-vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~ 164 (641)
.++.+. +||..+++.. .+.+|...+..++|+|++++|++++.|+.|++||+.+++....+.+|.+
T Consensus 356 -------------~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~ 421 (1045)
T 1k32_A 356 -------------REGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA 421 (1045)
T ss_dssp -------------TTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS
T ss_pred -------------CCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCC
Confidence 678888 9999887654 4447888999999999999999999999999999999998888878999
Q ss_pred CEEEEEEecCCCEEEEEeCCC----------eEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEE
Q psy9327 165 YVMCAQFHPTDDIVVSASLDQ----------TIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLH 234 (641)
Q Consensus 165 ~V~sl~fsp~g~~lvSgs~Dg----------tI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~ 234 (641)
.+.+++|+|||++|++++.++ .|++||+.+++ ...+..+...+.++.. .|--. .+...+.++...
T Consensus 422 ~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~-spdG~---~l~~~s~~~~~~ 496 (1045)
T 1k32_A 422 MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAF-DADSK---NLYYLSYRSLDP 496 (1045)
T ss_dssp CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEE-CTTSC---EEEEEESCCCCC
T ss_pred CccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceE-cCCCC---EEEEEecccCCc
Confidence 999999999999998887754 99999999877 4444444333322110 00000 011111111111
Q ss_pred E------------------------------------------ecCCC--cceeeec-CCcceEEEEEcCCccEEEE---
Q psy9327 235 I------------------------------------------CNRKM--EPLCNIH-ENTRVKSGAWDESGVFIYT--- 266 (641)
Q Consensus 235 i------------------------------------------~d~~~--~~~~~~~-~~~~I~sla~~p~g~~L~t--- 266 (641)
. |+..+ ..+..+. +...+.+++++|+|.++++
T Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~ 576 (1045)
T 1k32_A 497 SPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPV 576 (1045)
T ss_dssp EECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCC
T ss_pred CcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecc
Confidence 1 11111 1112222 3466889999999987775
Q ss_pred ----------ecCCeEEEEEcCCCCeEeccccce--EEEEEcCcEEEEEeCCCCeEEEEeCCcc-----hhh-----hH-
Q psy9327 267 ----------TSNHIKYAIVNGDHGIIRTLDLPI--YITKIKGNQVYYLDRECSPHVLRIDPTE-----FKF-----KL- 323 (641)
Q Consensus 267 ----------~s~~~k~~l~~~~~g~I~~~d~p~--~~~~~~g~~v~~~~~dg~i~v~~~~~~~-----~~~-----k~- 323 (641)
.....++++|+..++....+..++ ..+..+|..++..+.+ .+++|+..+.+ ..+ +.
T Consensus 577 ~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~v~~~~~S~DG~~l~~~~~~-~i~~~d~~~~~~~~~~~~~~~~~~~i~ 655 (1045)
T 1k32_A 577 HGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKNNLTDLRLSADRKTVMVRKDD-GKIYTFPLEKPEDERTVETDKRPLVSS 655 (1045)
T ss_dssp CCSHHHHHHCCCCCEEEEEEETTTCCEEEEEEEEEEEEECTTSCEEEEEETT-SCEEEEESSCTTSCEECCCCSSCEEEE
T ss_pred cCcccccccccCCCceEEEEECCCCcEEEeecCcceEEECCCCCEEEEEcCC-cEEEEeCccCcccCCccccceeEEEEC
Confidence 124678888888887766543322 2344568888887766 89999998765 111 11
Q ss_pred --HHhccchHHHHHHHhcCcc
Q psy9327 324 --ALINHKYEEVLHIVRNSRL 342 (641)
Q Consensus 324 --~l~~~~~~~~l~~~~~s~l 342 (641)
+-....|+++.+++++..+
T Consensus 656 ~~~~~~~~~~~~~~~~~~~y~ 676 (1045)
T 1k32_A 656 IHEEFLQMYDEAWKLARDNYW 676 (1045)
T ss_dssp HHHHHHHHHHHHHHHHHHHCS
T ss_pred hhHHHHHHHHHHHHHHHHhhc
Confidence 1122345677777776544
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.9e-16 Score=179.93 Aligned_cols=278 Identities=6% Similarity=0.027 Sum_probs=176.2
Q ss_pred EEEEccCCCeEEEEeCCCcEEEEECccCccccccccccc---CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 14 GLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEG---PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 14 ~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~---~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
+++|+|+|.++++ +.||+|++||..+++....+..|.. .+.+++|||||++|++++.... .|
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~-~~------------- 84 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSK-LW------------- 84 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEE-CS-------------
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCce-eE-------------
Confidence 7899999965554 5699999999999987666665554 4899999999999998861000 00
Q ss_pred eeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE-ccCCCCE---
Q psy9327 91 FRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL-TGHNHYV--- 166 (641)
Q Consensus 91 ~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l-~~h~~~V--- 166 (641)
-.+.++.|++||+.+++.+.... -.+.+..++|||||++|++++ |+.|++||..++++.... .++...|
T Consensus 85 -----~~s~~~~i~~~d~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g 157 (719)
T 1z68_A 85 -----RYSYTATYYIYDLSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNG 157 (719)
T ss_dssp -----SSCEEEEEEEEETTTTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEES
T ss_pred -----EeecceEEEEEECCCCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcc
Confidence 00126899999999998631111 135688899999999999986 789999999888765432 2333323
Q ss_pred --------------EEEEEecCCCEEEEEeCCC----------------------------------eEEEEecCCCcee
Q psy9327 167 --------------MCAQFHPTDDIVVSASLDQ----------------------------------TIRVWDISGLRKK 198 (641)
Q Consensus 167 --------------~sl~fsp~g~~lvSgs~Dg----------------------------------tI~IWD~~~~~~~ 198 (641)
.+++|+|||+.|++++.|. +|++||+.+++..
T Consensus 158 ~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~ 237 (719)
T 1z68_A 158 IPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYV 237 (719)
T ss_dssp SCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHH
T ss_pred cccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCcc
Confidence 4899999999999988653 7899999987653
Q ss_pred ---e-----eccCCCceeeecccCCCceeeeeeeeeeC--CCeeEEEec----CCC-cceeee-----cCCcceE-----
Q psy9327 199 ---N-----VAPGMGKLVLSMKSKHPIWKYCKPVKYCN--PKHTLHICN----RKM-EPLCNI-----HENTRVK----- 253 (641)
Q Consensus 199 ---~-----~~~~~~~~v~s~~~~~~v~~~~~~l~s~~--~d~~I~i~d----~~~-~~~~~~-----~~~~~I~----- 253 (641)
. .+.++...+.++... |--.+.+. .... ....|.+|| ... ...... .+...+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~S-pD~~~~~~-~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 315 (719)
T 1z68_A 238 GPQEVPVPAMIASSDYYFSWLTWV-TDERVCLQ-WLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVS 315 (719)
T ss_dssp CCEECCCCHHHHTSCEEEEEEEES-SSSEEEEE-EEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCC
T ss_pred ceeEccCCccCCCCcceEEEeEEe-CCCeEEEE-EeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCC
Confidence 1 122344444443221 11111111 1111 224577888 332 222222 2234454
Q ss_pred EEEEcCCccEEEE--ecC--CeEEEEEcCCCCeEeccccc---e--EEEEEcCcEEEEEeC-----CCCeEEEEeCC
Q psy9327 254 SGAWDESGVFIYT--TSN--HIKYAIVNGDHGIIRTLDLP---I--YITKIKGNQVYYLDR-----ECSPHVLRIDP 316 (641)
Q Consensus 254 sla~~p~g~~L~t--~s~--~~k~~l~~~~~g~I~~~d~p---~--~~~~~~g~~v~~~~~-----dg~i~v~~~~~ 316 (641)
+.+|+|+|..++. ... ...+++|+.+++..+.+... + ..+. +++.++..+. ++...+|.++.
T Consensus 316 ~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 316 TPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp CCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred ccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 7899999986554 333 45677887666554433211 1 1122 5666655554 47888998764
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.4e-15 Score=183.10 Aligned_cols=161 Identities=16% Similarity=0.125 Sum_probs=141.0
Q ss_pred eeccCCC-CeEEEEEccCCCeEEEEeCCCcEE-EEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 4 KFETKSA-RVKGLSFHPKRPWILSSLHNGVIQ-LWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 4 ~~~~H~~-~V~~l~fspdg~~Lasg~~dg~I~-iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.+..|.+ .+.+++|+ ||+.+++++.++.+. +||..+++.. .+..|...+.+++|+|+++++++++
T Consensus 331 ~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~----------- 397 (1045)
T 1k32_A 331 KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVAN----------- 397 (1045)
T ss_dssp ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEE-----------
T ss_pred EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEEC-----------
Confidence 4556777 89999999 999999999888888 8998877543 3447888999999999999999997
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCC----------eEEEEECC
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ----------TIRIWYWQ 151 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg----------~I~vWd~~ 151 (641)
.++.|++||+.+++....+.+|.+.+.+++|+|+|++|++++.++ .|++||+.
T Consensus 398 -----------------~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 398 -----------------DRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp -----------------TTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred -----------------CCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 899999999999998888878999999999999999998887654 99999999
Q ss_pred CCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCC
Q psy9327 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195 (641)
Q Consensus 152 ~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~ 195 (641)
+++ +..+.+|...+.+++|+|+|+.|++++.++..++|+....
T Consensus 461 ~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~ 503 (1045)
T 1k32_A 461 GRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVL 503 (1045)
T ss_dssp TTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSS
T ss_pred CCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhcc
Confidence 887 7788889999999999999999999999988888886543
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.4e-15 Score=156.86 Aligned_cols=244 Identities=7% Similarity=-0.056 Sum_probs=168.4
Q ss_pred CeEEEEEccCCCeEE-EEeCCCcEEEEECccCcccccccc-----cccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 11 RVKGLSFHPKRPWIL-SSLHNGVIQLWDYRMNTLLEKFDE-----HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 11 ~V~~l~fspdg~~La-sg~~dg~I~iWD~~~~~~l~~~~~-----h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
.+.+++|+|+|++++ ++..++.|.+||..+++.+..+.. |...+.+++|+|++.++++++.....
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~--------- 105 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRL--------- 105 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEE---------
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccc---------
Confidence 588999999998664 555689999999999887766643 23367789999999988887410000
Q ss_pred ccCCcceeeEEEee--CCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC
Q psy9327 85 RNEPCLFRIKSVLG--DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 85 ~~~~~~~~~~~~~s--~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h 162 (641)
.+ ..- .++.|.+||..+++.+..+.. ...+.+++|+|++++++++ ++.|++||..+++.+..+..+
T Consensus 106 --~~-------~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~ 173 (337)
T 1pby_B 106 --EL-------THFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQ 173 (337)
T ss_dssp --CS-------SCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECST
T ss_pred --cc-------ccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeecc
Confidence 00 000 368999999999998887764 4567889999999988887 689999999999988777654
Q ss_pred CCCEEEEEEecCCCEEEEEeC-CC-----------------------eEEEEecCCCceeee-ccCCCceeeecccCCCc
Q psy9327 163 NHYVMCAQFHPTDDIVVSASL-DQ-----------------------TIRVWDISGLRKKNV-APGMGKLVLSMKSKHPI 217 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~-Dg-----------------------tI~IWD~~~~~~~~~-~~~~~~~v~s~~~~~~v 217 (641)
... ..+.|+|++..++.++. ++ .|.+||..+++.... ...+...+.++.. .|-
T Consensus 174 ~~~-~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-s~d 251 (337)
T 1pby_B 174 SWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAV-NPA 251 (337)
T ss_dssp TTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEE-CTT
T ss_pred ccC-CCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEE-CCC
Confidence 311 12378999886654443 22 468999998776411 1111111111110 110
Q ss_pred eeeeeeeeeeCCCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe
Q psy9327 218 WKYCKPVKYCNPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI 282 (641)
Q Consensus 218 ~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~ 282 (641)
-.. +..+ ++.|.+|| ..++....+.....+.+++|+|+|.++++++.++.+.+|+.+++.
T Consensus 252 g~~---l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 252 KTR---AFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp SSE---EEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred CCE---EEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 000 2222 68899999 445555666666778899999999999998888999999877654
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.68 E-value=6.9e-15 Score=155.70 Aligned_cols=280 Identities=9% Similarity=0.037 Sum_probs=184.7
Q ss_pred eeeccCCCCeEE-----EEEccCCCeEEEEeC-CCc--EEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeE
Q psy9327 3 TKFETKSARVKG-----LSFHPKRPWILSSLH-NGV--IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIV 74 (641)
Q Consensus 3 ~~~~~H~~~V~~-----l~fspdg~~Lasg~~-dg~--I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~ 74 (641)
+.+..|...... .+|||||++|+.++. +|. |.+||..+++.......+...+.+++|+|+++.|+.++
T Consensus 24 ~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~---- 99 (388)
T 3pe7_A 24 TRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVK---- 99 (388)
T ss_dssp EECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEE----
T ss_pred EEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEe----
Confidence 456666666666 889999999998887 674 88889888887666666666666788999999999997
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEE--EccCCCEEEEE-------------
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTF--FHHEYPWILSA------------- 139 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~--fsp~~~~l~sg------------- 139 (641)
.++.|.+||+.+++....+..+.+.+.... ++|++.+++..
T Consensus 100 ------------------------~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~ 155 (388)
T 3pe7_A 100 ------------------------DGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDW 155 (388)
T ss_dssp ------------------------TTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSH
T ss_pred ------------------------CCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCccccccccc
Confidence 788999999999988777776766665444 48999988743
Q ss_pred ---------eCCCeEEEEECCCCeeEEEEccCCCCEEEEEEec-CCCEEEEEeCC------CeEEEEecCCCceeeeccC
Q psy9327 140 ---------SDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP-TDDIVVSASLD------QTIRVWDISGLRKKNVAPG 203 (641)
Q Consensus 140 ---------s~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp-~g~~lvSgs~D------gtI~IWD~~~~~~~~~~~~ 203 (641)
+.+..|.+||+.+++.. .+..+...+..+.|+| +|..|+.++.+ ..|.++|..+.........
T Consensus 156 ~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~ 234 (388)
T 3pe7_A 156 KKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTH 234 (388)
T ss_dssp HHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCC
T ss_pred chhhhhhccCCcceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeC
Confidence 24578999999988644 4445777899999999 99988877763 3788888776554433332
Q ss_pred CC-ceeeecccCCCceeeeee-eee-----eCCCeeEEEecCCCcceeeecC-Cc------ceEEEEEcCCccEEEEe--
Q psy9327 204 MG-KLVLSMKSKHPIWKYCKP-VKY-----CNPKHTLHICNRKMEPLCNIHE-NT------RVKSGAWDESGVFIYTT-- 267 (641)
Q Consensus 204 ~~-~~v~s~~~~~~v~~~~~~-l~s-----~~~d~~I~i~d~~~~~~~~~~~-~~------~I~sla~~p~g~~L~t~-- 267 (641)
.. ..+.. +.|..... ++. +..+..|.+||........+.. .. .....+|+|+|..|+..
T Consensus 235 ~~~~~~~~-----~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 309 (388)
T 3pe7_A 235 AEGESCTH-----EFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQ 309 (388)
T ss_dssp CTTEEEEE-----EEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-----
T ss_pred CCCccccc-----ceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEee
Confidence 21 12322 11211111 111 1122359999944332222211 11 01123799999888854
Q ss_pred -------cCCeEEEEEcCCCCeEeccccce----------------EEEEEcCcEEE-EEeCCCCeEEEEeCC
Q psy9327 268 -------SNHIKYAIVNGDHGIIRTLDLPI----------------YITKIKGNQVY-YLDRECSPHVLRIDP 316 (641)
Q Consensus 268 -------s~~~k~~l~~~~~g~I~~~d~p~----------------~~~~~~g~~v~-~~~~dg~i~v~~~~~ 316 (641)
..+..+++|+.+.+.++.+.... ..+..+|..++ +.+++|...+|.++-
T Consensus 310 ~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 310 DDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp -------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred eccccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 45668999998888765442211 13556666554 455788888887664
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.67 E-value=2.1e-14 Score=150.98 Aligned_cols=247 Identities=9% Similarity=0.047 Sum_probs=160.8
Q ss_pred CCCCeEEEEEccCCCeEEEEeCC----CcEEEEECcc--Cc--ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHN----GVIQLWDYRM--NT--LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~d----g~I~iWD~~~--~~--~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
|...+..++|+|+|++|++++.+ |.|.+|++.. ++ .+.....+......+++ ++.++++++
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~--------- 116 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTAN--------- 116 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEE---------
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEE---------
Confidence 56677889999999999998875 8999999865 43 23333345566778888 777777765
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEE------Ecc--------CCCCeEEEEEccCCCEEEEEe-CCCe
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT------LLG--------HLDYIRTTFFHHEYPWILSAS-DDQT 144 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~------~~~--------h~~~V~~v~fsp~~~~l~sgs-~Dg~ 144 (641)
..++.|.+|++.....+.. ..+ +...+.+++|+|+++++++++ .++.
T Consensus 117 ------------------~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 178 (361)
T 3scy_A 117 ------------------YSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQ 178 (361)
T ss_dssp ------------------TTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTE
T ss_pred ------------------CCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCE
Confidence 2789999999975432211 111 123458899999999665554 5899
Q ss_pred EEEEECCCCee-------------EEEEccCCCCEEEEEEecCCCEEEEEe-CCCeEEEEecCCCcee--eecc---CCC
Q psy9327 145 IRIWYWQSRNC-------------ICVLTGHNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDISGLRKK--NVAP---GMG 205 (641)
Q Consensus 145 I~vWd~~~~~~-------------i~~l~~h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~~~~~--~~~~---~~~ 205 (641)
|.+|++..... ......+...+..++|+|+|+++++++ .+++|.+||+.+++.. .... ...
T Consensus 179 v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~ 258 (361)
T 3scy_A 179 IHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNA 258 (361)
T ss_dssp EEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCC
T ss_pred EEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCC
Confidence 99998875431 122234456688999999999887777 6899999999876432 2121 111
Q ss_pred ceeeecccCCCceeeeeeeeeeCC-CeeEEEecCC---Cc--ceeeecCCcceEEEEEcCCccEEEEec-CCeEEEE--E
Q psy9327 206 KLVLSMKSKHPIWKYCKPVKYCNP-KHTLHICNRK---ME--PLCNIHENTRVKSGAWDESGVFIYTTS-NHIKYAI--V 276 (641)
Q Consensus 206 ~~v~s~~~~~~v~~~~~~l~s~~~-d~~I~i~d~~---~~--~~~~~~~~~~I~sla~~p~g~~L~t~s-~~~k~~l--~ 276 (641)
.....+. .+|--.. -+.+... ++.+.+|+.. +. .+..+..+..+.+++|+|+|.+|++++ .++.+.+ +
T Consensus 259 ~~~~~i~-~spdg~~--l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 259 QGSGDIH-LSPDGKY--LYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp CCEEEEE-ECTTSSE--EEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred CCcccEE-ECCCCCE--EEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEE
Confidence 1111111 0110000 0233344 6889999842 22 344444456788999999999998887 5566666 5
Q ss_pred cCCCCeEecc
Q psy9327 277 NGDHGIIRTL 286 (641)
Q Consensus 277 ~~~~g~I~~~ 286 (641)
+.++|.+..+
T Consensus 336 d~~~g~~~~~ 345 (361)
T 3scy_A 336 DQATGLLTDI 345 (361)
T ss_dssp CTTTCCEEEC
T ss_pred ECCCCcEeec
Confidence 6667766644
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.65 E-value=1.8e-14 Score=167.01 Aligned_cols=282 Identities=9% Similarity=0.087 Sum_probs=173.4
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccC-----eEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGP-----VRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~-----V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
....+++|+|||.+++++ ||+|++||+.+++....+..|... ...++|||||++++.++.......
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r------- 87 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWR------- 87 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSS-------
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEE-------
Confidence 346689999999988886 899999999999876666666532 244889999999998861000000
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE-EccCC
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV-LTGHN 163 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~-l~~h~ 163 (641)
-+..+.+.+||+.+++.. .+..|.+.+...+|||||+.|+.++ |+.|++||..+++.... ..++.
T Consensus 88 ------------~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~ 153 (740)
T 4a5s_A 88 ------------HSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKE 153 (740)
T ss_dssp ------------SCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBT
T ss_pred ------------EccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCc
Confidence 001267889999999854 4667888999999999999999885 68999999988775432 23443
Q ss_pred CCE-----------------EEEEEecCCCEEEEEeCCC------------------------------------eEEEE
Q psy9327 164 HYV-----------------MCAQFHPTDDIVVSASLDQ------------------------------------TIRVW 190 (641)
Q Consensus 164 ~~V-----------------~sl~fsp~g~~lvSgs~Dg------------------------------------tI~IW 190 (641)
..+ .++.|||||+.|+.++.|. ++++|
T Consensus 154 ~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~ 233 (740)
T 4a5s_A 154 DIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVV 233 (740)
T ss_dssp TTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEE
T ss_pred cceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEE
Confidence 333 3589999999999886443 47777
Q ss_pred ecCC---C---ceeeecc-----CCCceeeecccCCCcee-eeeeeeeeCCCeeEEEec-CCCc------ceee---ecC
Q psy9327 191 DISG---L---RKKNVAP-----GMGKLVLSMKSKHPIWK-YCKPVKYCNPKHTLHICN-RKME------PLCN---IHE 248 (641)
Q Consensus 191 D~~~---~---~~~~~~~-----~~~~~v~s~~~~~~v~~-~~~~l~s~~~d~~I~i~d-~~~~------~~~~---~~~ 248 (641)
|+.+ + +...... ++..++.++... |--. +...+.....+..|.+|| ..+. .... -.+
T Consensus 234 d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ws-pdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~ 312 (740)
T 4a5s_A 234 NTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWA-TQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMST 312 (740)
T ss_dssp ETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEE-ETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECS
T ss_pred ECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEe-CCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccC
Confidence 8777 5 2222211 133333332111 1000 001111223445788998 3333 1111 112
Q ss_pred Ccce-----EEEEEcCCccEEE-EecC---CeEEEEEcCCCCeEecccc---c-eEEEEEcCcEEEEEeCC-----CCeE
Q psy9327 249 NTRV-----KSGAWDESGVFIY-TTSN---HIKYAIVNGDHGIIRTLDL---P-IYITKIKGNQVYYLDRE-----CSPH 310 (641)
Q Consensus 249 ~~~I-----~sla~~p~g~~L~-t~s~---~~k~~l~~~~~g~I~~~d~---p-~~~~~~~g~~v~~~~~d-----g~i~ 310 (641)
...+ .+.+|+|||..++ ..+. ...+++++.+.+..+.+.. . ......+++.++..+.. +...
T Consensus 313 ~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ 392 (740)
T 4a5s_A 313 TGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRN 392 (740)
T ss_dssp SSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBE
T ss_pred CceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEEEEeCCEEEEEEecCCCCCceeE
Confidence 3333 3688999999876 5553 3678888877766553321 1 11222446665554432 3445
Q ss_pred EEEeC
Q psy9327 311 VLRID 315 (641)
Q Consensus 311 v~~~~ 315 (641)
+|.++
T Consensus 393 ly~v~ 397 (740)
T 4a5s_A 393 LYKIQ 397 (740)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55444
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.2e-13 Score=143.83 Aligned_cols=239 Identities=10% Similarity=0.048 Sum_probs=172.1
Q ss_pred CCCeEEEEEccCCCeEEEEeCC------------------------CcEEEEECccCccccccc-ccccCeEEEEEeCCC
Q psy9327 9 SARVKGLSFHPKRPWILSSLHN------------------------GVIQLWDYRMNTLLEKFD-EHEGPVRGICFHNQQ 63 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~d------------------------g~I~iWD~~~~~~l~~~~-~h~~~V~~i~fsp~~ 63 (641)
-+.+.+++++|+|+++++...+ ++|.+||..+++.+..+. .+-....+++++|++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999998888777 479999998888776554 344678999999999
Q ss_pred CEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe-eEEEE---------ccCCCCeEEEEEcc-C
Q psy9327 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK-CIFTL---------LGHLDYIRTTFFHH-E 132 (641)
Q Consensus 64 ~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~-~~~~~---------~~h~~~V~~v~fsp-~ 132 (641)
.++++.. .++.|++||..... .+..+ .++.....+++|+| +
T Consensus 103 ~l~v~d~----------------------------~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~ 154 (329)
T 3fvz_A 103 NYWVTDV----------------------------ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPST 154 (329)
T ss_dssp CEEEEET----------------------------TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTT
T ss_pred CEEEEEC----------------------------CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCC
Confidence 9887776 78999999976442 56666 34556789999999 8
Q ss_pred CCEEEEEe-CCCeEEEEECCCCeeEEEEcc----------CCCCEEEEEEecC-CCEEEEEeCCCeEEEEecCCCceeee
Q psy9327 133 YPWILSAS-DDQTIRIWYWQSRNCICVLTG----------HNHYVMCAQFHPT-DDIVVSASLDQTIRVWDISGLRKKNV 200 (641)
Q Consensus 133 ~~~l~sgs-~Dg~I~vWd~~~~~~i~~l~~----------h~~~V~sl~fsp~-g~~lvSgs~DgtI~IWD~~~~~~~~~ 200 (641)
+.++++.+ .++.|++|| .+++.+..+.. +......++++|+ +.++++.+.+++|++||..+++....
T Consensus 155 g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~ 233 (329)
T 3fvz_A 155 GAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVRE 233 (329)
T ss_dssp CCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred CeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 88888886 799999999 66777777642 3344899999998 77888888899999999998877776
Q ss_pred cc--CCCceeeecccCCC--ceeeeee-eeeeCCCeeEEEec-CCCcceeeec----CCcceEEEEEcCCccEEEEecCC
Q psy9327 201 AP--GMGKLVLSMKSKHP--IWKYCKP-VKYCNPKHTLHICN-RKMEPLCNIH----ENTRVKSGAWDESGVFIYTTSNH 270 (641)
Q Consensus 201 ~~--~~~~~v~s~~~~~~--v~~~~~~-l~s~~~d~~I~i~d-~~~~~~~~~~----~~~~I~sla~~p~g~~L~t~s~~ 270 (641)
+. .++..+.++.. +| ++..... ..+....+.+.+|| ..+..+..+. .......++++|+|..+++...+
T Consensus 234 ~~~~~~~~~~~~~~~-~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~ 312 (329)
T 3fvz_A 234 IKHASFGRNVFAISY-IPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHT 312 (329)
T ss_dssp ECCTTTTTCEEEEEE-ETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSS
T ss_pred EeccccCCCcceeee-cCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCC
Confidence 63 23333332211 12 1111111 22333566899999 5566666553 34567889999999666665555
Q ss_pred eEEEEEc
Q psy9327 271 IKYAIVN 277 (641)
Q Consensus 271 ~k~~l~~ 277 (641)
+++..|+
T Consensus 313 ~~I~~~~ 319 (329)
T 3fvz_A 313 NTVWKFT 319 (329)
T ss_dssp CCEEEEE
T ss_pred CEEEEEe
Confidence 5666554
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.64 E-value=2.3e-13 Score=138.03 Aligned_cols=237 Identities=13% Similarity=0.168 Sum_probs=166.6
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc------ccccCeEEEEEe-CCCCEEEEeceeeEEeeec
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD------EHEGPVRGICFH-NQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~------~h~~~V~~i~fs-p~~~~l~sgs~~~~~~~~~ 79 (641)
+|-..+.+++++|++.++++...++.|.+||.. ++.+..+. .+...+.++++. +++.++++..
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~--------- 96 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTER--------- 96 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEEC---------
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcC---------
Confidence 455789999999999988888889999999976 55555553 244678999995 6777666663
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc-CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG-HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~-h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
+.++.|.+|| .+++.+..+.. +...+.+++++|++.++++.+.++.|.+||.. ++.+..
T Consensus 97 ------------------~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~ 156 (286)
T 1q7f_A 97 ------------------SPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHK 156 (286)
T ss_dssp ------------------GGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred ------------------CCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEE
Confidence 1388999999 66777777743 45678999999999988888889999999964 555555
Q ss_pred Ec--cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEe
Q psy9327 159 LT--GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236 (641)
Q Consensus 159 l~--~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~ 236 (641)
+. ++...+.+++++|+|.++++.+.++.|++||... +....+...+
T Consensus 157 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~g------------------------------- 204 (286)
T 1q7f_A 157 FGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-QYLRQIGGEG------------------------------- 204 (286)
T ss_dssp EECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC-CEEEEESCTT-------------------------------
T ss_pred eCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC-CEEEEEccCC-------------------------------
Confidence 53 4566799999999999888888899999999754 2222221100
Q ss_pred cCCCcceeeecCCcceEEEEEcCCccEEEEecCCe-EEEEEcCCCCeEecccc------ceEEEEEcCcEEEEEeCCCCe
Q psy9327 237 NRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHI-KYAIVNGDHGIIRTLDL------PIYITKIKGNQVYYLDRECSP 309 (641)
Q Consensus 237 d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~-k~~l~~~~~g~I~~~d~------p~~~~~~~g~~v~~~~~dg~i 309 (641)
....+..++++++|.++++...++ .+.+|+.+...+..+.. |..+.-.....++..+.++++
T Consensus 205 -----------~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v 273 (286)
T 1q7f_A 205 -----------ITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRL 273 (286)
T ss_dssp -----------TSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEE
T ss_pred -----------ccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeE
Confidence 013455678888887666666554 78888765555554422 222222223334444678888
Q ss_pred EEEEeCC
Q psy9327 310 HVLRIDP 316 (641)
Q Consensus 310 ~v~~~~~ 316 (641)
++|+...
T Consensus 274 ~v~~~~~ 280 (286)
T 1q7f_A 274 YIYRYVQ 280 (286)
T ss_dssp EEEECSC
T ss_pred EEEEccc
Confidence 8887654
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.62 E-value=8.5e-14 Score=145.27 Aligned_cols=258 Identities=10% Similarity=0.048 Sum_probs=162.5
Q ss_pred CCcEEEEECc--cCcccc-cccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEE
Q psy9327 30 NGVIQLWDYR--MNTLLE-KFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVW 106 (641)
Q Consensus 30 dg~I~iWD~~--~~~~l~-~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vW 106 (641)
++.|.+|+++ +++... ....+...+..++|+|+++ +++++. .+.++.|.+|
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~-------------------------~~~~~~v~~~ 68 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDK-------------------------EDDEGGIAAW 68 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEE-------------------------ETTEEEEEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEe-------------------------cCCCceEEEE
Confidence 5668888775 344322 2334567778899999999 555541 0136899999
Q ss_pred ECCCCe--eEEEEccCCCCeEEEEEccCCCEEEEEe-CCCeEEEEECCC-C--eeEEEEcc---------CCCCEEEEEE
Q psy9327 107 NYKQRK--CIFTLLGHLDYIRTTFFHHEYPWILSAS-DDQTIRIWYWQS-R--NCICVLTG---------HNHYVMCAQF 171 (641)
Q Consensus 107 D~~t~~--~~~~~~~h~~~V~~v~fsp~~~~l~sgs-~Dg~I~vWd~~~-~--~~i~~l~~---------h~~~V~sl~f 171 (641)
|+.+++ .+..+..+...+..++|+|+++++++++ .+++|.+||+.. + +.+..+.. +...+.+++|
T Consensus 69 ~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 148 (347)
T 3hfq_A 69 QIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDL 148 (347)
T ss_dssp EEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEE
T ss_pred EecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEE
Confidence 998776 4455556778889999999999888887 789999999963 2 33333321 1234889999
Q ss_pred ecCCCEEEEEeCCCeEEEEecC-CCceeee--ccC-CCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC---Cc--c
Q psy9327 172 HPTDDIVVSASLDQTIRVWDIS-GLRKKNV--APG-MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK---ME--P 242 (641)
Q Consensus 172 sp~g~~lvSgs~DgtI~IWD~~-~~~~~~~--~~~-~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~---~~--~ 242 (641)
+|+|+++++...++.|++||+. +++.... ... .+.....+. .+|--. ..+.+...++.+.+|+.. +. .
T Consensus 149 spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~-~spdg~--~l~v~~~~~~~v~v~~~~~~~g~~~~ 225 (347)
T 3hfq_A 149 TPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLV-FSPDGQ--YAFLAGELSSQIASLKYDTQTGAFTQ 225 (347)
T ss_dssp CTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEE-ECTTSS--EEEEEETTTTEEEEEEEETTTTEEEE
T ss_pred CCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEE-ECCCCC--EEEEEeCCCCEEEEEEecCCCCceEE
Confidence 9999977777778999999998 4433211 111 111111111 111000 012344567889999833 22 1
Q ss_pred eeeecC-------CcceEEEEEcCCccEEEEe-cCCeEEEEEcCC-CCeEe---cccc----ce-EEEEEcCcEEEEEeC
Q psy9327 243 LCNIHE-------NTRVKSGAWDESGVFIYTT-SNHIKYAIVNGD-HGIIR---TLDL----PI-YITKIKGNQVYYLDR 305 (641)
Q Consensus 243 ~~~~~~-------~~~I~sla~~p~g~~L~t~-s~~~k~~l~~~~-~g~I~---~~d~----p~-~~~~~~g~~v~~~~~ 305 (641)
...+.. ...+..++|+|+|.+|+.+ ..++.+.+|+.+ +|... .+.. |. ..+..++..++..+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 305 (347)
T 3hfq_A 226 LGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQ 305 (347)
T ss_dssp EEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEET
T ss_pred eeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEc
Confidence 222221 1458889999999988654 467888888754 33332 2211 22 224566777877775
Q ss_pred C-CCeEEEEeCC
Q psy9327 306 E-CSPHVLRIDP 316 (641)
Q Consensus 306 d-g~i~v~~~~~ 316 (641)
+ +.+.+|.++.
T Consensus 306 ~~~~v~v~~~d~ 317 (347)
T 3hfq_A 306 NTDNATLYARDL 317 (347)
T ss_dssp TTTEEEEEEECT
T ss_pred CCCcEEEEEEeC
Confidence 4 8899998875
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.62 E-value=5.3e-14 Score=148.67 Aligned_cols=257 Identities=10% Similarity=0.005 Sum_probs=165.2
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECc-cCccccccccc-ccCeEEEEEeCCCCE--EEEeceeeEEeeeceeeecc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYR-MNTLLEKFDEH-EGPVRGICFHNQQPI--FVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~-~~~~l~~~~~h-~~~V~~i~fsp~~~~--l~sgs~~~~~~~~~~~~~~~ 85 (641)
..+..++|+|+|++|++++.+ .|.+||+. +++........ .+.+.+++|+|++++ +++++. +
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~-------~------ 105 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQ-------P------ 105 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSS-------T------
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecC-------C------
Confidence 467899999999999999887 99999997 77654332211 133556899999995 344420 0
Q ss_pred cCCcceeeEEEee----CCCeEEEEECC-CCeeEEEEc----cCCCCeEEEEEccCCCEEEEEe-CCCeEEEEECC-CCe
Q psy9327 86 NEPCLFRIKSVLG----DDYKIKVWNYK-QRKCIFTLL----GHLDYIRTTFFHHEYPWILSAS-DDQTIRIWYWQ-SRN 154 (641)
Q Consensus 86 ~~~~~~~~~~~~s----~Dg~I~vWD~~-t~~~~~~~~----~h~~~V~~v~fsp~~~~l~sgs-~Dg~I~vWd~~-~~~ 154 (641)
. +...+. .++++.+|++. +++....+. .+...+.+++|+|+|+++++++ .++.|++||+. +++
T Consensus 106 -----~-~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~ 179 (365)
T 1jof_A 106 -----P-YAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGE 179 (365)
T ss_dssp -----T-CCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC
T ss_pred -----c-ceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCC
Confidence 0 000001 48899999997 466544433 2556799999999999887765 46899999998 675
Q ss_pred eE--EEEc--cCCCCEEEEEEecCCCEEEEEeC-CCeEEEEecC--CCceee---eccCCCceeeecccCCCceeeeeee
Q psy9327 155 CI--CVLT--GHNHYVMCAQFHPTDDIVVSASL-DQTIRVWDIS--GLRKKN---VAPGMGKLVLSMKSKHPIWKYCKPV 224 (641)
Q Consensus 155 ~i--~~l~--~h~~~V~sl~fsp~g~~lvSgs~-DgtI~IWD~~--~~~~~~---~~~~~~~~v~s~~~~~~v~~~~~~l 224 (641)
.. ..+. .|...++.++|+|+|+++++++. +++|.+|++. +++... .+... ...
T Consensus 180 ~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~-------~~~---------- 242 (365)
T 1jof_A 180 VELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLI-------PPG---------- 242 (365)
T ss_dssp EEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESS-------CTT----------
T ss_pred EEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcC-------CCC----------
Confidence 43 3343 24667999999999999887775 7899999875 333211 00000 000
Q ss_pred eeeCCCeeEEEecCCCcceeeecCCcceEEEE-EcCCccEEEEecCC-e-----EEEEEcCC-CCeEec----ccc----
Q psy9327 225 KYCNPKHTLHICNRKMEPLCNIHENTRVKSGA-WDESGVFIYTTSNH-I-----KYAIVNGD-HGIIRT----LDL---- 288 (641)
Q Consensus 225 ~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla-~~p~g~~L~t~s~~-~-----k~~l~~~~-~g~I~~----~d~---- 288 (641)
..+. . .. ......+..++ |+|+|++|++++.. . .+.+|+.+ +|.+.. ...
T Consensus 243 ----~~g~------~-~~---~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~ 308 (365)
T 1jof_A 243 ----IPDR------D-PE---TGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSG 308 (365)
T ss_dssp ----CCCB------C-TT---TSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCC
T ss_pred ----cCCc------c-cc---cccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCC
Confidence 0000 0 00 00011467899 99999999877632 2 78888754 565442 211
Q ss_pred ce-EEEEE---cCcEEEEEeCC-CCeEEEEeCCc
Q psy9327 289 PI-YITKI---KGNQVYYLDRE-CSPHVLRIDPT 317 (641)
Q Consensus 289 p~-~~~~~---~g~~v~~~~~d-g~i~v~~~~~~ 317 (641)
|. ..+.. +|..++..+.+ +.+.+|+++..
T Consensus 309 ~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 309 GHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred cccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 11 12345 68889888865 89999999875
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.8e-14 Score=166.11 Aligned_cols=227 Identities=9% Similarity=0.107 Sum_probs=152.5
Q ss_pred CeEEEEEccCCCeEEEEeC---------CCcEEEEECccCccc--ccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 11 RVKGLSFHPKRPWILSSLH---------NGVIQLWDYRMNTLL--EKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~---------dg~I~iWD~~~~~~l--~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
.|.+++|||||++|++++. +++|++||+.+++.+ ..+ ...+..++|||||++|+.+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~---------- 127 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYV---------- 127 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEE----------
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEE----------
Confidence 3889999999999998876 789999999988763 223 3568899999999999998
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE-ccCCCCe-----------------EEEEEccCCCEEEEEeC
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL-LGHLDYI-----------------RTTFFHHEYPWILSASD 141 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~-~~h~~~V-----------------~~v~fsp~~~~l~sgs~ 141 (641)
.++.|++||..+++..... .++...| .+++|+|||++|++++.
T Consensus 128 -------------------~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~ 188 (719)
T 1z68_A 128 -------------------YQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEF 188 (719)
T ss_dssp -------------------ETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEE
T ss_pred -------------------ECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEE
Confidence 4789999999988765432 2333322 48999999999999886
Q ss_pred CC----------------------------------eEEEEECCCCeeE--------EEEccCCCCEEEEEEecCCCEEE
Q psy9327 142 DQ----------------------------------TIRIWYWQSRNCI--------CVLTGHNHYVMCAQFHPTDDIVV 179 (641)
Q Consensus 142 Dg----------------------------------~I~vWd~~~~~~i--------~~l~~h~~~V~sl~fsp~g~~lv 179 (641)
|. +|++||+.+++.. ..+.+|...+.+++|+||+.+++
T Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~ 268 (719)
T 1z68_A 189 NDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCL 268 (719)
T ss_dssp ECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEE
T ss_pred CCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEE
Confidence 52 7899999987652 12346888999999999988777
Q ss_pred EEeCC----CeEEEEe----cCCCceeeec----cCCCceeeecccCCCceeeeee---eeeeC--CCeeEEEecCCCcc
Q psy9327 180 SASLD----QTIRVWD----ISGLRKKNVA----PGMGKLVLSMKSKHPIWKYCKP---VKYCN--PKHTLHICNRKMEP 242 (641)
Q Consensus 180 Sgs~D----gtI~IWD----~~~~~~~~~~----~~~~~~v~s~~~~~~v~~~~~~---l~s~~--~d~~I~i~d~~~~~ 242 (641)
+.... ..|.+|| ..+++..... .++...+.......+.|..... +.+.. ....|.+||.....
T Consensus 269 ~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 269 QWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp EEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT
T ss_pred EEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc
Confidence 74432 2488899 7777766655 2443333200001233322211 11222 34467777844433
Q ss_pred eeeecC-CcceEEEEEcCCccEEEEecCC
Q psy9327 243 LCNIHE-NTRVKSGAWDESGVFIYTTSNH 270 (641)
Q Consensus 243 ~~~~~~-~~~I~sla~~p~g~~L~t~s~~ 270 (641)
...+.. ...+..+.+. ++..++..+.+
T Consensus 349 ~~~lt~~~~~v~~~~~~-d~~~i~~~~~~ 376 (719)
T 1z68_A 349 AIQITSGKWEAINIFRV-TQDSLFYSSNE 376 (719)
T ss_dssp CEECSCSSSCEEEEEEE-CSSEEEEEESC
T ss_pred eEecccCceEEEEEEEE-eCCEEEEEEec
Confidence 333433 4456666666 66666655543
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.57 E-value=6.4e-13 Score=135.67 Aligned_cols=232 Identities=9% Similarity=0.046 Sum_probs=158.5
Q ss_pred eeeccCCCCeEEEEEccCCC-eEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 3 TKFETKSARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
..+..+.....+++|+|+|+ +++++..++.|..||..++ ...+..+...+.+++|+|++.++++..
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~----------- 87 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSH----------- 87 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEET-----------
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEec-----------
Confidence 45566777889999999998 7788888999999998876 566777788899999999999887775
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccC----CCCeEEEEEccCCCEEEEEeC----------------
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH----LDYIRTTFFHHEYPWILSASD---------------- 141 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h----~~~V~~v~fsp~~~~l~sgs~---------------- 141 (641)
.++.|.+||..+++........ ...+.+++++|+|.++++.+.
T Consensus 88 -----------------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~ 150 (296)
T 3e5z_A 88 -----------------GLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMEL 150 (296)
T ss_dssp -----------------TTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCS
T ss_pred -----------------CCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccC
Confidence 6789999999888765443322 234678999999998887321
Q ss_pred -CCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecC-CCce---eeeccCCCceee--ecccC
Q psy9327 142 -DQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GLRK---KNVAPGMGKLVL--SMKSK 214 (641)
Q Consensus 142 -Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~-~~~~---~~~~~~~~~~v~--s~~~~ 214 (641)
.+.|..+|.. ++ ...+..+......++|+|+++.+++.+.++.|.+||+. .++. ...+........ .....
T Consensus 151 ~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~ 228 (296)
T 3e5z_A 151 PGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAG 228 (296)
T ss_dssp SSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTT
T ss_pred CCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCC
Confidence 3456666654 43 44555677788999999999988888888999999996 3332 122211100000 11111
Q ss_pred CCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEE-cCCccEEEEecCCeEEE
Q psy9327 215 HPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAW-DESGVFIYTTSNHIKYA 274 (641)
Q Consensus 215 ~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~-~p~g~~L~t~s~~~k~~ 274 (641)
.. +..+. ++.|.+||..+..+..+.....+.+++| +|++..|+.++.++-+.
T Consensus 229 G~-------l~v~~-~~~v~~~~~~g~~~~~~~~~~~~~~~~f~~~d~~~L~v~t~~~l~~ 281 (296)
T 3e5z_A 229 GL-------IWASA-GDGVHVLTPDGDELGRVLTPQTTSNLCFGGPEGRTLYMTVSTEFWS 281 (296)
T ss_dssp SC-------EEEEE-TTEEEEECTTSCEEEEEECSSCCCEEEEESTTSCEEEEEETTEEEE
T ss_pred CC-------EEEEc-CCeEEEECCCCCEEEEEECCCCceeEEEECCCCCEEEEEcCCeEEE
Confidence 11 11222 5667778766666555554333777777 47777777777654333
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.2e-13 Score=146.14 Aligned_cols=271 Identities=9% Similarity=0.013 Sum_probs=168.8
Q ss_pred eEEEEEccCCCeEEEEeCC---CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 12 VKGLSFHPKRPWILSSLHN---GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 12 V~~l~fspdg~~Lasg~~d---g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
+.+++|+|||++|+.+... ..|.+||..+++.......+......+.|+|++++|+.++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~------------------ 99 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVK------------------ 99 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEE------------------
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEE------------------
Confidence 7788999999998877543 4688889888765433333333333478999999998887
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEE-------------------EEEccCCCEEEEE-----eCCCe
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRT-------------------TFFHHEYPWILSA-----SDDQT 144 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~-------------------v~fsp~~~~l~sg-----s~Dg~ 144 (641)
.++.|.+||+.+++.......+.+.... ++|+|+++.++.+ ..+..
T Consensus 100 ----------~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~ 169 (396)
T 3c5m_A 100 ----------NELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCR 169 (396)
T ss_dssp ----------TTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEE
T ss_pred ----------cCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcce
Confidence 7789999999998876666545443322 3467777766544 45678
Q ss_pred EEEEECCCCeeEEEEccCCCCEEEEEEec-CCCEEEEEeCC------CeEEEEecCCCceeeeccCC-CceeeecccCCC
Q psy9327 145 IRIWYWQSRNCICVLTGHNHYVMCAQFHP-TDDIVVSASLD------QTIRVWDISGLRKKNVAPGM-GKLVLSMKSKHP 216 (641)
Q Consensus 145 I~vWd~~~~~~i~~l~~h~~~V~sl~fsp-~g~~lvSgs~D------gtI~IWD~~~~~~~~~~~~~-~~~v~s~~~~~~ 216 (641)
|++||+.+++..... .+...+..+.|+| ++..|+.++.+ ..|.+||+.+++........ ...+..+. ..|
T Consensus 170 l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~-~sp 247 (396)
T 3c5m_A 170 LIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEF-WIP 247 (396)
T ss_dssp EEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEE-ECT
T ss_pred EEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceE-ECC
Confidence 999999988765444 4677899999999 78877766654 36888888765543333311 11222211 111
Q ss_pred ceeeeeeeeee-----CCCeeEEEecCCCcceeeecCCcceEEEEEcC-CccEEEEec----------------CCeEEE
Q psy9327 217 IWKYCKPVKYC-----NPKHTLHICNRKMEPLCNIHENTRVKSGAWDE-SGVFIYTTS----------------NHIKYA 274 (641)
Q Consensus 217 v~~~~~~l~s~-----~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p-~g~~L~t~s----------------~~~k~~ 274 (641)
--.. ++.+ ...+.|.+||........+....... .+|+| +|.+++.++ .+..++
T Consensus 248 dg~~---l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~ 323 (396)
T 3c5m_A 248 DGSA---MAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLY 323 (396)
T ss_dssp TSSC---EEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEE-EEEECSSSSEEEEEECCC----------CCCCCCEEE
T ss_pred CCCE---EEEEecCCCCccceEEEEECCCCCeEEeeeCCCCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEE
Confidence 0000 1222 12255999995433332222211233 89999 999888754 346788
Q ss_pred EEcCCCCeEecccc-c---------------eEEEEEcCcEEEE-EeCCCCeEEEEeCC
Q psy9327 275 IVNGDHGIIRTLDL-P---------------IYITKIKGNQVYY-LDRECSPHVLRIDP 316 (641)
Q Consensus 275 l~~~~~g~I~~~d~-p---------------~~~~~~~g~~v~~-~~~dg~i~v~~~~~ 316 (641)
+|+.+++.++.+.. + ...+..+|..++. .++++...+|.++.
T Consensus 324 ~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~ 382 (396)
T 3c5m_A 324 VLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADV 382 (396)
T ss_dssp EEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred EEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEE
Confidence 89877665433211 1 1234456666554 44667777777663
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.52 E-value=8.4e-13 Score=136.81 Aligned_cols=227 Identities=9% Similarity=-0.028 Sum_probs=152.9
Q ss_pred EEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCC-CCeEEEEEccCCC
Q psy9327 56 GICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL-DYIRTTFFHHEYP 134 (641)
Q Consensus 56 ~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~-~~V~~v~fsp~~~ 134 (641)
++++++++.++++++ .+++|.+||..+++.+..+..+. ..+..++|+|+++
T Consensus 4 g~~~~~~~~~~v~~~----------------------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 55 (349)
T 1jmx_B 4 GPALKAGHEYMIVTN----------------------------YPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNR 55 (349)
T ss_dssp CCCCCTTCEEEEEEE----------------------------TTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSS
T ss_pred cccccCCCEEEEEeC----------------------------CCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCC
Confidence 456777887888876 89999999999999988887554 2577899999998
Q ss_pred EE-EEEeCCCeEEEEECCCCeeEEEEccCC------CCEEEEEEecCCCEEEEEeCC------------CeEEEEecCCC
Q psy9327 135 WI-LSASDDQTIRIWYWQSRNCICVLTGHN------HYVMCAQFHPTDDIVVSASLD------------QTIRVWDISGL 195 (641)
Q Consensus 135 ~l-~sgs~Dg~I~vWd~~~~~~i~~l~~h~------~~V~sl~fsp~g~~lvSgs~D------------gtI~IWD~~~~ 195 (641)
.+ ++++.++.|.+||..+++.+..+..+. ..+.+++|+|+|+++++++.+ +.|.+||+.++
T Consensus 56 ~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 135 (349)
T 1jmx_B 56 TAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG 135 (349)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred EEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCc
Confidence 55 566678999999999998887776332 237789999999999998865 89999999885
Q ss_pred ceee---eccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC-CCcceeeecC-----------------------
Q psy9327 196 RKKN---VAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR-KMEPLCNIHE----------------------- 248 (641)
Q Consensus 196 ~~~~---~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~-~~~~~~~~~~----------------------- 248 (641)
+... ...... .+.++.. +| ...+..+ ++.+.+||. .+.....+..
T Consensus 136 ~~~~~~~~~~~~~-~~~~~~~-s~----dg~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (349)
T 1jmx_B 136 LEAKPVRTFPMPR-QVYLMRA-AD----DGSLYVA--GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPR 207 (349)
T ss_dssp GGBCCSEEEECCS-SCCCEEE-CT----TSCEEEE--SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTT
T ss_pred cccceeeeccCCC-cccceeE-CC----CCcEEEc--cCcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcc
Confidence 4332 222111 1211110 11 0001111 223777773 3332222211
Q ss_pred ----------------------------------------------CcceEEEEEcC-CccEEEEecCCeEEEEEcCCCC
Q psy9327 249 ----------------------------------------------NTRVKSGAWDE-SGVFIYTTSNHIKYAIVNGDHG 281 (641)
Q Consensus 249 ----------------------------------------------~~~I~sla~~p-~g~~L~t~s~~~k~~l~~~~~g 281 (641)
...+.+++|+| +|.+++++ ++.+.+|+..++
T Consensus 208 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~ 285 (349)
T 1jmx_B 208 HEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQR 285 (349)
T ss_dssp CEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTT
T ss_pred eeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccC
Confidence 11345678889 99999988 778999998877
Q ss_pred eE-ecccc---ce-EEEEEcCcEEEEEeCCCCeEEEEeCCcchh
Q psy9327 282 II-RTLDL---PI-YITKIKGNQVYYLDRECSPHVLRIDPTEFK 320 (641)
Q Consensus 282 ~I-~~~d~---p~-~~~~~~g~~v~~~~~dg~i~v~~~~~~~~~ 320 (641)
.+ ..++. +. ..+..++..++..+.++.+.+|+.++.+..
T Consensus 286 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 286 KLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKV 329 (349)
T ss_dssp EEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEE
T ss_pred eEEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEecccccee
Confidence 64 33322 21 224456778888888899999998875543
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.4e-12 Score=137.81 Aligned_cols=250 Identities=10% Similarity=0.020 Sum_probs=156.3
Q ss_pred ccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEE--eCCCCEEEEeceeeEEeeeceeee
Q psy9327 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICF--HNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~f--sp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
.+|...+.+.+|+|||+.|+.++.++.|.+||+.+++....+..+.+.+....| +|++..++.... .+
T Consensus 77 ~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~------~~---- 146 (388)
T 3pe7_A 77 EGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEI------RR---- 146 (388)
T ss_dssp CSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEE------EG----
T ss_pred eCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccc------cC----
Confidence 345555557789999999999999999999999998776656556665554444 899998875320 00
Q ss_pred cccCCcce----eeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeCC------CeEEEEECCC
Q psy9327 84 SRNEPCLF----RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH-EYPWILSASDD------QTIRIWYWQS 152 (641)
Q Consensus 84 ~~~~~~~~----~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~D------g~I~vWd~~~ 152 (641)
....+... ........+..|.+||+.+++.. .+..+...+..++|+| ++..|+.++.+ ..|.++|...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~ 225 (388)
T 3pe7_A 147 EDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG 225 (388)
T ss_dssp GGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS
T ss_pred cccccccccchhhhhhccCCcceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC
Confidence 00000000 00001125578999999998754 4445777899999999 99988877753 3788888766
Q ss_pred CeeEEEEccCC--CCEEEEEEecCCCEEEEEeC-CC----eEEEEecCCCceeee--ccCCCceeeecccCCCceeeeee
Q psy9327 153 RNCICVLTGHN--HYVMCAQFHPTDDIVVSASL-DQ----TIRVWDISGLRKKNV--APGMGKLVLSMKSKHPIWKYCKP 223 (641)
Q Consensus 153 ~~~i~~l~~h~--~~V~sl~fsp~g~~lvSgs~-Dg----tI~IWD~~~~~~~~~--~~~~~~~v~s~~~~~~v~~~~~~ 223 (641)
+.. ..+..+. ..+....|+|+|+.|+..+. ++ .|.+||+.+++.... .++...... ......|.....
T Consensus 226 ~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~--~~~~~~~spdg~ 302 (388)
T 3pe7_A 226 TNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMS--NYDGSLMVGDGS 302 (388)
T ss_dssp CCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEE--CTTSSEEEEEEC
T ss_pred Cce-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeee--cCCCCeEccCCC
Confidence 543 3444444 35788999999997755443 22 399999998875332 222101100 011112332221
Q ss_pred -eee---------eCCCeeEEEecCCCcceeeecC-Cc-----------ceEEEEEcCCccEEEEecC
Q psy9327 224 -VKY---------CNPKHTLHICNRKMEPLCNIHE-NT-----------RVKSGAWDESGVFIYTTSN 269 (641)
Q Consensus 224 -l~s---------~~~d~~I~i~d~~~~~~~~~~~-~~-----------~I~sla~~p~g~~L~t~s~ 269 (641)
++. ...+..|.+||........+.. .. .+.+++|+|+|..|+.++.
T Consensus 303 ~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~ 370 (388)
T 3pe7_A 303 DAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSD 370 (388)
T ss_dssp CC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred cceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEec
Confidence 111 1456689999955444444433 22 4778899999998887663
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.50 E-value=4.6e-13 Score=141.37 Aligned_cols=204 Identities=10% Similarity=0.045 Sum_probs=139.3
Q ss_pred eEEEEEccCCCe--EEEEe-------------CCCcEEEEECc-cCccccccc----ccccCeEEEEEeCCCCEEEEece
Q psy9327 12 VKGLSFHPKRPW--ILSSL-------------HNGVIQLWDYR-MNTLLEKFD----EHEGPVRGICFHNQQPIFVSGGK 71 (641)
Q Consensus 12 V~~l~fspdg~~--Lasg~-------------~dg~I~iWD~~-~~~~l~~~~----~h~~~V~~i~fsp~~~~l~sgs~ 71 (641)
+.+++|+|+|++ ++++. .+|++.+|++. .++....+. .+...+.+++|+|+|+++++++
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~- 163 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD- 163 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE-
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc-
Confidence 556899999994 55553 68999999997 465544333 2456899999999999888775
Q ss_pred eeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC-CCeeE--EEEc--cCCCCeEEEEEccCCCEEEEEeC-CCeE
Q psy9327 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK-QRKCI--FTLL--GHLDYIRTTFFHHEYPWILSASD-DQTI 145 (641)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~-t~~~~--~~~~--~h~~~V~~v~fsp~~~~l~sgs~-Dg~I 145 (641)
..++.|.+||+. +++.. ..+. .|...++.++|+|+++++++++. ++.|
T Consensus 164 --------------------------~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v 217 (365)
T 1jof_A 164 --------------------------LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRI 217 (365)
T ss_dssp --------------------------TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred --------------------------CCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeE
Confidence 257899999998 77643 3343 24567999999999998887764 7899
Q ss_pred EEEECC--CCeeE---EEEc-------cCCC------CEEEEE-EecCCCEEEEEeCCC------eEEEEecC-CCceee
Q psy9327 146 RIWYWQ--SRNCI---CVLT-------GHNH------YVMCAQ-FHPTDDIVVSASLDQ------TIRVWDIS-GLRKKN 199 (641)
Q Consensus 146 ~vWd~~--~~~~i---~~l~-------~h~~------~V~sl~-fsp~g~~lvSgs~Dg------tI~IWD~~-~~~~~~ 199 (641)
.+|++. +++.. ..+. +|.. .+..++ |+|+|++|++++.+. +|.+||+. +++...
T Consensus 218 ~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~ 297 (365)
T 1jof_A 218 CEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEK 297 (365)
T ss_dssp EEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEE
T ss_pred EEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEE
Confidence 999875 45432 1221 2232 588999 999999887766432 89999986 333211
Q ss_pred eccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcC---CccEEEEecC-CeEEEE
Q psy9327 200 VAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDE---SGVFIYTTSN-HIKYAI 275 (641)
Q Consensus 200 ~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p---~g~~L~t~s~-~~k~~l 275 (641)
... .+ . ........++|+| +|.+|++++. ++.+.+
T Consensus 298 ~~~----~~---~----------------------------------~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v 336 (365)
T 1jof_A 298 QLF----LS---P----------------------------------TPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEI 336 (365)
T ss_dssp EEE----EE---E----------------------------------CSSCCTTCCCEEECTTCTTEEEEECSSSCEEEE
T ss_pred eee----ee---e----------------------------------cCCCCcccceecCCCcCCCEEEEEEcCCCeEEE
Confidence 000 00 0 0112234478888 7999998875 477777
Q ss_pred EcCCCCeE
Q psy9327 276 VNGDHGII 283 (641)
Q Consensus 276 ~~~~~g~I 283 (641)
|..+.+.+
T Consensus 337 ~~~~~~~l 344 (365)
T 1jof_A 337 YRWKDEFL 344 (365)
T ss_dssp EEEETTEE
T ss_pred EEEchhhC
Confidence 76555433
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.50 E-value=4.3e-13 Score=152.86 Aligned_cols=238 Identities=11% Similarity=0.060 Sum_probs=164.0
Q ss_pred eeccCCCCeEEEEEccCCCeEEEE--eCCCcEEEEECccCcccccccccccCeE---------EEEEe--CCCCE-EEEe
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSS--LHNGVIQLWDYRMNTLLEKFDEHEGPVR---------GICFH--NQQPI-FVSG 69 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg--~~dg~I~iWD~~~~~~l~~~~~h~~~V~---------~i~fs--p~~~~-l~sg 69 (641)
.+.+|...+..++|++++-+++++ +.++...||....+.....+..|...+. ...|+ ||+.. |+.+
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 356799999999999887777777 5588999999655545556666666666 66676 99998 7766
Q ss_pred ceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC--C-CeeEEEEcc-----CCCCeEEEEEccCCCEEEEEeC
Q psy9327 70 GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK--Q-RKCIFTLLG-----HLDYIRTTFFHHEYPWILSASD 141 (641)
Q Consensus 70 s~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~--t-~~~~~~~~~-----h~~~V~~v~fsp~~~~l~sgs~ 141 (641)
+ ..+..|.+|+.. . +. ...+.. |...+.+++|+|||+.|++++.
T Consensus 98 ~---------------------------~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~ 149 (662)
T 3azo_A 98 H---------------------------FGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAE 149 (662)
T ss_dssp B---------------------------TTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEE
T ss_pred E---------------------------CCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEe
Confidence 5 146677777776 3 43 455555 6678899999999999999887
Q ss_pred C----------CeEEEEECCC------CeeEEEEc-cCCCCEEEEEEecCCCEEEEEeCCC--------eEEEEecC-CC
Q psy9327 142 D----------QTIRIWYWQS------RNCICVLT-GHNHYVMCAQFHPTDDIVVSASLDQ--------TIRVWDIS-GL 195 (641)
Q Consensus 142 D----------g~I~vWd~~~------~~~i~~l~-~h~~~V~sl~fsp~g~~lvSgs~Dg--------tI~IWD~~-~~ 195 (641)
| ..|++||+.+ ++. ..+. .+...+..++|+|||++|+.++.++ .|++||+. ++
T Consensus 150 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g 228 (662)
T 3azo_A 150 EFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDG 228 (662)
T ss_dssp EECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTS
T ss_pred cccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCC
Confidence 7 6899999988 554 4555 6667888999999999999887553 78888887 44
Q ss_pred ---ceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEecCCe-
Q psy9327 196 ---RKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHI- 271 (641)
Q Consensus 196 ---~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~- 271 (641)
+...... .+...+.+++|+|||.++++++.++
T Consensus 229 ~~~~~~~l~~--------------------------------------------~~~~~~~~~~~spdg~l~~~~~~~~~ 264 (662)
T 3azo_A 229 RFADTRTLLG--------------------------------------------GPEEAIAQAEWAPDGSLIVATDRTGW 264 (662)
T ss_dssp CEEEEEEEEE--------------------------------------------ETTBCEEEEEECTTSCEEEEECTTSS
T ss_pred cccccEEeCC--------------------------------------------CCCceEcceEECCCCeEEEEECCCCC
Confidence 1111111 1134556678888888666666555
Q ss_pred -EEEEEcCCCCeEecc-cc-------------ceEEEEEcCcEEEEEeCCCCeEEEEeC
Q psy9327 272 -KYAIVNGDHGIIRTL-DL-------------PIYITKIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 272 -k~~l~~~~~g~I~~~-d~-------------p~~~~~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
++++++.+++..+.+ .. ....+..++..+++.+. +..++|.++
T Consensus 265 ~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 265 WNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp CEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEE
T ss_pred eEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEE
Confidence 667776555544322 11 01112235666677777 778888665
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.50 E-value=1.8e-12 Score=147.78 Aligned_cols=246 Identities=7% Similarity=0.011 Sum_probs=159.9
Q ss_pred eeccCCCCeE---------EEEEc--cCCCe-EEEEeC-CCcEEEEECc--c-Ccccccccc-----cccCeEEEEEeCC
Q psy9327 4 KFETKSARVK---------GLSFH--PKRPW-ILSSLH-NGVIQLWDYR--M-NTLLEKFDE-----HEGPVRGICFHNQ 62 (641)
Q Consensus 4 ~~~~H~~~V~---------~l~fs--pdg~~-Lasg~~-dg~I~iWD~~--~-~~~l~~~~~-----h~~~V~~i~fsp~ 62 (641)
.+..|...+. +..|+ |||++ |+.++. +..|.+|+.. . + ....+.. |...+.+++|+||
T Consensus 62 ~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~-~~~~l~~~~~~~~~~~~~~~~~spD 140 (662)
T 3azo_A 62 SALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGA-VPRPLTPVSAVGGGLRWADPVLLPE 140 (662)
T ss_dssp ESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCC-CCEECSCCCCSTTCEEEEEEEEETT
T ss_pred eeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCC-CCEeccCCccCCCCccccCcEECCC
Confidence 4555655555 56565 99998 776654 5566666654 2 3 3444444 6778999999999
Q ss_pred CCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCC----------CeEEEEECCC------CeeEEEEc-cCCCCeE
Q psy9327 63 QPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDD----------YKIKVWNYKQ------RKCIFTLL-GHLDYIR 125 (641)
Q Consensus 63 ~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~D----------g~I~vWD~~t------~~~~~~~~-~h~~~V~ 125 (641)
|+.|++++ .+ ..|.+||+.+ ++. ..+. .+.+.+.
T Consensus 141 g~~l~~~~----------------------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~ 191 (662)
T 3azo_A 141 RGEVWCMA----------------------------EEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVT 191 (662)
T ss_dssp TTEEEEEE----------------------------EEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEEC
T ss_pred CCEEEEEE----------------------------ecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCccc
Confidence 99999886 33 5899999988 554 4555 6667888
Q ss_pred EEEEccCCCEEEEEeCC--------CeEEEEECC-CC---eeEEEEccCCCCEEEEEEecCCCEEEEEeCCC--eEEEEe
Q psy9327 126 TTFFHHEYPWILSASDD--------QTIRIWYWQ-SR---NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQ--TIRVWD 191 (641)
Q Consensus 126 ~v~fsp~~~~l~sgs~D--------g~I~vWd~~-~~---~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~Dg--tI~IWD 191 (641)
.++|+|||++|+.++.+ ..|++||+. ++ +......+|...+..+.|+|||+++++++.|+ .|.+||
T Consensus 192 ~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~ 271 (662)
T 3azo_A 192 GPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVD 271 (662)
T ss_dssp CCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEEC
T ss_pred CceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEE
Confidence 89999999999987755 479999998 56 44444555678999999999999888888888 566666
Q ss_pred cCCCceeeeccCCCceeeecccCCCcee-----eee-----eeeeeCCCeeEEEe--cCCCcceeeecC-CcceEEE-EE
Q psy9327 192 ISGLRKKNVAPGMGKLVLSMKSKHPIWK-----YCK-----PVKYCNPKHTLHIC--NRKMEPLCNIHE-NTRVKSG-AW 257 (641)
Q Consensus 192 ~~~~~~~~~~~~~~~~v~s~~~~~~v~~-----~~~-----~l~s~~~d~~I~i~--d~~~~~~~~~~~-~~~I~sl-a~ 257 (641)
..+++......++.. + ..|.|. +.+ -+.++.. +.+++| |.....+..+.. ...+.++ ++
T Consensus 272 ~~~~~~~~l~~~~~~-~-----~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~~s~ 344 (662)
T 3azo_A 272 PATGAATQLCRREEE-F-----AGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVDAAGPWTEWAATLTV 344 (662)
T ss_dssp TTTCCEEESSCCSSB-S-----SCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEECCSSCCEEEEEEEE
T ss_pred CCCCceeeccccccc-c-----cCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEecCCCCeEEEEEec
Confidence 656665544433211 1 111111 111 1333444 677777 544333444433 4456666 66
Q ss_pred cCCccEEEEecCC--eEEEEEcCCCCeEecc
Q psy9327 258 DESGVFIYTTSNH--IKYAIVNGDHGIIRTL 286 (641)
Q Consensus 258 ~p~g~~L~t~s~~--~k~~l~~~~~g~I~~~ 286 (641)
++++..+++++.+ ..++.++.+++..+.+
T Consensus 345 ~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 345 SGTRAVGVAASPRTAYEVVELDTVTGRARTI 375 (662)
T ss_dssp ETTEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred CCCEEEEEEcCCCCCCEEEEEECCCCceEEe
Confidence 6655555555544 3566666666655433
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.50 E-value=1.1e-11 Score=128.47 Aligned_cols=230 Identities=12% Similarity=0.073 Sum_probs=151.9
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
.+..+...+.+++|+|+|++++++..++.|.+||..+++.......+...+.+++|+|++.+++++.
T Consensus 39 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~------------- 105 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYL------------- 105 (333)
T ss_dssp EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEEC-------------
T ss_pred EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeC-------------
Confidence 4556677789999999999888888899999999988765443335667899999999999877765
Q ss_pred cccCCcceeeEEEeeCC----CeEEEEECCCCeeEEEEc--cCCCCeEEEEEccCCCEEEEEeC------CCeEEEEECC
Q psy9327 84 SRNEPCLFRIKSVLGDD----YKIKVWNYKQRKCIFTLL--GHLDYIRTTFFHHEYPWILSASD------DQTIRIWYWQ 151 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~D----g~I~vWD~~t~~~~~~~~--~h~~~V~~v~fsp~~~~l~sgs~------Dg~I~vWd~~ 151 (641)
.+ +.|.+||..+++....+. .+...+.+++++|++.++++... .+.|..||..
T Consensus 106 ---------------~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~ 170 (333)
T 2dg1_A 106 ---------------GDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD 170 (333)
T ss_dssp ---------------TTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT
T ss_pred ---------------CCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCC
Confidence 44 689999998887654443 24457899999999998877664 3567777766
Q ss_pred CCeeEEEEccCCCCEEEEEEecCCCEE-EEEeCCCeEEEEecCC-Cceeeec--------cCCCceeee--cccCCCcee
Q psy9327 152 SRNCICVLTGHNHYVMCAQFHPTDDIV-VSASLDQTIRVWDISG-LRKKNVA--------PGMGKLVLS--MKSKHPIWK 219 (641)
Q Consensus 152 ~~~~i~~l~~h~~~V~sl~fsp~g~~l-vSgs~DgtI~IWD~~~-~~~~~~~--------~~~~~~v~s--~~~~~~v~~ 219 (641)
+++... +..+...+..++|+|++..+ ++.+.++.|.+||..+ +.....+ .++ ..... ......+|
T Consensus 171 ~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~- 247 (333)
T 2dg1_A 171 FRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLY- 247 (333)
T ss_dssp SCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEE-
T ss_pred CCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEE-
Confidence 554432 33334568899999999855 4556688999999963 2222111 110 01111 11111111
Q ss_pred eeeeeeeeCCCeeEEEecCCCcceeeecCCc-------ceEEEEEcCCccEEEEecC
Q psy9327 220 YCKPVKYCNPKHTLHICNRKMEPLCNIHENT-------RVKSGAWDESGVFIYTTSN 269 (641)
Q Consensus 220 ~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~-------~I~sla~~p~g~~L~t~s~ 269 (641)
.+...++.|.+||.+...+..+.... .+.+++|+|++..|+.++.
T Consensus 248 -----v~~~~~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 248 -----VAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 299 (333)
T ss_dssp -----EEEETTTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred -----EEEcCCCEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeC
Confidence 12224567777776555544443321 4677888877766665543
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.49 E-value=5e-12 Score=146.43 Aligned_cols=238 Identities=11% Similarity=0.032 Sum_probs=153.4
Q ss_pred EEEEEccCCCeEEEEeCC---------CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 13 KGLSFHPKRPWILSSLHN---------GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 13 ~~l~fspdg~~Lasg~~d---------g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
..++|||||++|+.++.+ +.+.+||+.+++.. .+..|.+.+...+|||||+.|+.+
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-------------- 129 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-------------- 129 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE--------------
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE--------------
Confidence 448899999999998876 56779999998754 566788899999999999999988
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEE-EccCCCCe-----------------EEEEEccCCCEEEEEeCCC--
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT-LLGHLDYI-----------------RTTFFHHEYPWILSASDDQ-- 143 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~-~~~h~~~V-----------------~~v~fsp~~~~l~sgs~Dg-- 143 (641)
.|+.|.+||..+++.... ..++.+.+ .+++|||||+.|+.++.|.
T Consensus 130 ---------------~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~ 194 (740)
T 4a5s_A 130 ---------------WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTE 194 (740)
T ss_dssp ---------------ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTT
T ss_pred ---------------ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccC
Confidence 478999999998875442 23333333 3589999999999876332
Q ss_pred ----------------------------------eEEEEECCC---Ce--eEEEEc------cCCCCEEEEEEecCCCEE
Q psy9327 144 ----------------------------------TIRIWYWQS---RN--CICVLT------GHNHYVMCAQFHPTDDIV 178 (641)
Q Consensus 144 ----------------------------------~I~vWd~~~---~~--~i~~l~------~h~~~V~sl~fsp~g~~l 178 (641)
+|++||+.+ ++ ....+. +|...+..++|+|||+++
T Consensus 195 v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~ 274 (740)
T 4a5s_A 195 VPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERIS 274 (740)
T ss_dssp CCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEE
T ss_pred CceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEE
Confidence 588899988 73 233443 388899999999999966
Q ss_pred EEEeC----CCeEEEEecCCCc----eeeec----cCCCceeeecccCCCceeeeee-ee-ee---CCCeeEEEecCCCc
Q psy9327 179 VSASL----DQTIRVWDISGLR----KKNVA----PGMGKLVLSMKSKHPIWKYCKP-VK-YC---NPKHTLHICNRKME 241 (641)
Q Consensus 179 vSgs~----DgtI~IWD~~~~~----~~~~~----~~~~~~v~s~~~~~~v~~~~~~-l~-s~---~~d~~I~i~d~~~~ 241 (641)
+.... +..|++||..+++ +.... .++..++.......|.|..... ++ .. .....|.+||..+.
T Consensus 275 ~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~ 354 (740)
T 4a5s_A 275 LQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKK 354 (740)
T ss_dssp EEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCS
T ss_pred EEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCC
Confidence 65432 3479999999887 32222 2233333200012344432221 11 22 23457888885554
Q ss_pred ceeeecC-CcceEEEE-EcCCccEEEEecCC-------eEEEEEcCCCCe
Q psy9327 242 PLCNIHE-NTRVKSGA-WDESGVFIYTTSNH-------IKYAIVNGDHGI 282 (641)
Q Consensus 242 ~~~~~~~-~~~I~sla-~~p~g~~L~t~s~~-------~k~~l~~~~~g~ 282 (641)
....+.. ...+..+. ++ +..++..++. ..++..+.+.+.
T Consensus 355 ~~~~lT~g~~~v~~~~~~d--~~~i~f~~~~~~~~~~~~~ly~v~~~g~~ 402 (740)
T 4a5s_A 355 DCTFITKGTWEVIGIEALT--SDYLYYISNEYKGMPGGRNLYKIQLIDYT 402 (740)
T ss_dssp SCEESCCSSSCEEEEEEEC--SSEEEEEESCGGGCTTCBEEEEEETTEEE
T ss_pred ceEecccCCEEEEEEEEEe--CCEEEEEEecCCCCCceeEEEEEECCCCC
Confidence 4444443 33454443 55 4444443332 345555544443
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.48 E-value=2.1e-12 Score=135.54 Aligned_cols=160 Identities=8% Similarity=0.044 Sum_probs=117.3
Q ss_pred CCeEEEEEccCCCeEEEEe-CCCcEEEEECccCcc------c-------ccccccccCeEEEEEeCCCCEEEEeceeeEE
Q psy9327 10 ARVKGLSFHPKRPWILSSL-HNGVIQLWDYRMNTL------L-------EKFDEHEGPVRGICFHNQQPIFVSGGKMIVM 75 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~-~dg~I~iWD~~~~~~------l-------~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~ 75 (641)
..+.+++|+|+|+++++++ .++.|.+|++..... + .....+...+.+++|+|+++++++++
T Consensus 155 ~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~----- 229 (361)
T 3scy_A 155 PHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLIN----- 229 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE-----
T ss_pred CcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEc-----
Confidence 3468899999999776655 589999999875431 1 11123445678999999999887775
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee--EEEEc---cCCCCeEEEEEccCCCEEEEEeC--CCeEEEE
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLL---GHLDYIRTTFFHHEYPWILSASD--DQTIRIW 148 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~--~~~~~---~h~~~V~~v~fsp~~~~l~sgs~--Dg~I~vW 148 (641)
..++.|.+||+.+++. +..+. .+.....+++|+|+++++++++. ++.|.+|
T Consensus 230 ----------------------~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~ 287 (361)
T 3scy_A 230 ----------------------EIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIF 287 (361)
T ss_dssp ----------------------TTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEE
T ss_pred ----------------------CCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEE
Confidence 2689999999998764 33332 34456789999999998866655 5899999
Q ss_pred ECC--CCe--eEEEEccCCCCEEEEEEecCCCEEEEEe-CCCeEEEEecC--CCce
Q psy9327 149 YWQ--SRN--CICVLTGHNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDIS--GLRK 197 (641)
Q Consensus 149 d~~--~~~--~i~~l~~h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~--~~~~ 197 (641)
++. +++ .+..+.. ...+.+++|+|+|++|++++ .++.|.+|++. +++.
T Consensus 288 ~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~ 342 (361)
T 3scy_A 288 KVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLL 342 (361)
T ss_dssp EECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcE
Confidence 985 344 4445544 55788999999999888887 67899997554 5544
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=4.2e-10 Score=113.74 Aligned_cols=270 Identities=10% Similarity=0.050 Sum_probs=177.7
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc--ccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD--EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~--~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
+..+...+.+++++++|.+.++...++.|..||.. ++. ..+. .+...+.++++++++.+.++..
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~------------ 75 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI-TEYPLPTPDAKVMCLTISSDGEVWFTEN------------ 75 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-EEEECSSTTCCEEEEEECTTSCEEEEET------------
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-EEecCCcccCceeeEEECCCCCEEEeCC------------
Confidence 44566789999999999977776668899999987 543 3322 3456799999999999888775
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCee-EEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE-EEc
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC-IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC-VLT 160 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~-~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~-~l~ 160 (641)
.++.|..||.. ++. ...+......+.++++++++.++++...++.|..||. +++... ...
T Consensus 76 ----------------~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~ 137 (299)
T 2z2n_A 76 ----------------AANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELP 137 (299)
T ss_dssp ----------------TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECS
T ss_pred ----------------CCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCC
Confidence 68899999986 432 2222234567899999999998888888899999998 554332 233
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeee-ccCCCceeeecc--cCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNV-APGMGKLVLSMK--SKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~-~~~~~~~v~s~~--~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
.+...+.++++.++|.+.++...++.|..||. +++.... .+.....+.++. ....+| .+....+.|..+|
T Consensus 138 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~------v~~~~~~~i~~~~ 210 (299)
T 2z2n_A 138 NKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALW------FVEIIGNKIGRIT 210 (299)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEE------EEETTTTEEEEEC
T ss_pred CCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEE------EEccCCceEEEEC
Confidence 45567899999999988888777899999999 5554332 222122222211 111122 1223466788888
Q ss_pred CCCcceeeec---CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEecccc------ceEEEEEcCcEEEEEeCCCC
Q psy9327 238 RKMEPLCNIH---ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDL------PIYITKIKGNQVYYLDRECS 308 (641)
Q Consensus 238 ~~~~~~~~~~---~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~------p~~~~~~~g~~v~~~~~dg~ 308 (641)
.... +..+. ....+.+++++++|...++...++.+..++. ++.+..+.. |..+.. .+..++..+..+.
T Consensus 211 ~~g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~ 287 (299)
T 2z2n_A 211 TSGE-ITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAMECDK 287 (299)
T ss_dssp TTCC-EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTE
T ss_pred CCCc-EEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEecCCc
Confidence 6433 22232 2467889999999985555556677888876 566655432 222222 4445555554555
Q ss_pred eEEEEeCC
Q psy9327 309 PHVLRIDP 316 (641)
Q Consensus 309 i~v~~~~~ 316 (641)
+..++.++
T Consensus 288 l~~~~~~~ 295 (299)
T 2z2n_A 288 IGKLTLIK 295 (299)
T ss_dssp EEEEEEC-
T ss_pred EEEEEcCc
Confidence 55555544
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.47 E-value=5e-13 Score=150.12 Aligned_cols=153 Identities=9% Similarity=-0.042 Sum_probs=123.4
Q ss_pred eEEEEEccCCCe-EEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 12 VKGLSFHPKRPW-ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 12 V~~l~fspdg~~-Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
+...+|+|+|+. +++++.++.+.+||+.+++..... .+.. .+++|+|||+++++++
T Consensus 112 ~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~-~~~~--~~~~~spDG~~la~~~-------------------- 168 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELA-RLPG--FGFVSDIRGDLIAGLG-------------------- 168 (582)
T ss_dssp BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEE-EESS--CEEEEEEETTEEEEEE--------------------
T ss_pred ceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEee-cCCC--ceEEECCCCCEEEEEE--------------------
Confidence 446688888863 333444455669999888654433 3333 7899999999999876
Q ss_pred eeeEEEeeCC----CeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCC--eEEEEECCCCeeEEEEccCCC
Q psy9327 91 FRIKSVLGDD----YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ--TIRIWYWQSRNCICVLTGHNH 164 (641)
Q Consensus 91 ~~~~~~~s~D----g~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg--~I~vWd~~~~~~i~~l~~h~~ 164 (641)
.+ +.|++||+.+++.. .+..|.+.+..++|+|||++|++++.|+ .|++||+.+++.. .+.+|..
T Consensus 169 --------~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~ 238 (582)
T 3o4h_A 169 --------FFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSK 238 (582)
T ss_dssp --------EEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCS
T ss_pred --------EcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCc
Confidence 34 78999999988764 6788999999999999999999888888 8999999998887 7788888
Q ss_pred CEEEEE--------EecCCCEEEEEeCCCeEEEEecCCCceee
Q psy9327 165 YVMCAQ--------FHPTDDIVVSASLDQTIRVWDISGLRKKN 199 (641)
Q Consensus 165 ~V~sl~--------fsp~g~~lvSgs~DgtI~IWD~~~~~~~~ 199 (641)
.+..+. |+|||.++++++.|+++++|++ ++...
T Consensus 239 ~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~ 279 (582)
T 3o4h_A 239 DFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE 279 (582)
T ss_dssp HHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC
T ss_pred ChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec
Confidence 777777 9999999999999999999999 55443
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.46 E-value=2.5e-11 Score=126.22 Aligned_cols=255 Identities=13% Similarity=0.053 Sum_probs=163.2
Q ss_pred CCeEEEEEccCCCeEEEEe---------CCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 10 ARVKGLSFHPKRPWILSSL---------HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~---------~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
..+...++ ||++++... .++.|.+||..+++.. .+ ..+..++|+|||.+|+.++.
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~--------- 78 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI----ENATMPRISPDGKKIAFMRA--------- 78 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEE---------
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEe---------
Confidence 45778888 898887642 2577999999887642 33 57889999999999988761
Q ss_pred eeecccCCcceeeEEEeeCC--C--eEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC--------------
Q psy9327 81 ILESRNEPCLFRIKSVLGDD--Y--KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD-------------- 142 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~D--g--~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D-------------- 142 (641)
.+ + .|.+||+.+++.......+ . +..++|+|+++.|+.++.+
T Consensus 79 ------------------~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~ 138 (347)
T 2gop_A 79 ------------------NEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVP 138 (347)
T ss_dssp ------------------ETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CC
T ss_pred ------------------ccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccc
Confidence 21 3 4888899888766555433 3 9999999999988887642
Q ss_pred -------------CeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCC-------eEEEEecCCCceeeecc
Q psy9327 143 -------------QTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQ-------TIRVWDISGLRKKNVAP 202 (641)
Q Consensus 143 -------------g~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~Dg-------tI~IWD~~~~~~~~~~~ 202 (641)
..|++||+.+++.+..+.. . .+..+.|+|+| ++++++.++ ...+|.+.+++......
T Consensus 139 ~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~ 215 (347)
T 2gop_A 139 AWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFE 215 (347)
T ss_dssp CC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEE
T ss_pred eeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEecc
Confidence 5799999999887555554 3 78899999999 888886652 44555544444332222
Q ss_pred CCCceeeecccCCCceeeeeeeeeeC--------CCeeEEEecCCCcceeeecC-CcceEE-EEEcCCccEEEEecCCeE
Q psy9327 203 GMGKLVLSMKSKHPIWKYCKPVKYCN--------PKHTLHICNRKMEPLCNIHE-NTRVKS-GAWDESGVFIYTTSNHIK 272 (641)
Q Consensus 203 ~~~~~v~s~~~~~~v~~~~~~l~s~~--------~d~~I~i~d~~~~~~~~~~~-~~~I~s-la~~p~g~~L~t~s~~~k 272 (641)
+ ..+.+....... ++.++ ....|.+|| .+........ ...+.. ++|+ +| .+++++.++.
T Consensus 216 ~--~~~~~~spdg~~------l~~~~~~~~~~~~~~~~l~~~d-~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~ 284 (347)
T 2gop_A 216 K--VSFYAVDSDGER------ILLYGKPEKKYMSEHNKLYIYD-GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGS 284 (347)
T ss_dssp E--ESEEEEEECSSC------EEEEECCSSSCCCSSCEEEEEC-SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTE
T ss_pred C--cceeeECCCCCE------EEEEEccccCCccccceEEEEC-CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCc
Confidence 1 112211100000 22221 235788888 4433322222 456775 8999 88 8888887777
Q ss_pred EEEEcCCCCeEecc---ccceEEEEEcCcEEEEEeCCCCe-EEEEeC
Q psy9327 273 YAIVNGDHGIIRTL---DLPIYITKIKGNQVYYLDRECSP-HVLRID 315 (641)
Q Consensus 273 ~~l~~~~~g~I~~~---d~p~~~~~~~g~~v~~~~~dg~i-~v~~~~ 315 (641)
..+| .++|....+ +..+.........+++.+.++.. .+|.++
T Consensus 285 ~~l~-~~~g~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 285 VNLY-IWDGEIKPIAKGRHWIMGFDVDEIVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEE-EESSSEEEEECSSSEEEEEEESSSEEEEEECSSSCCEEEEES
T ss_pred EEEE-EcCCceEEEecCCCeEEeeeeeCcEEEEEcCCCChHHheEeC
Confidence 7777 555543322 22222222223566677766665 888887
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.44 E-value=2.8e-11 Score=122.48 Aligned_cols=197 Identities=11% Similarity=0.238 Sum_probs=145.2
Q ss_pred cCCCCeEEEEE-ccCCCeEEEEeC-CCcEEEEECccCcccccccc-cccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 7 TKSARVKGLSF-HPKRPWILSSLH-NGVIQLWDYRMNTLLEKFDE-HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 7 ~H~~~V~~l~f-spdg~~Lasg~~-dg~I~iWD~~~~~~l~~~~~-h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
+|...+.++++ .+++.++++... ++.|.+|| .+++.+..+.. +...+.+++++|++.++++..
T Consensus 74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~------------- 139 (286)
T 1q7f_A 74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVEC------------- 139 (286)
T ss_dssp TCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEET-------------
T ss_pred ccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEEC-------------
Confidence 34567899999 477776666643 88999999 56766666642 446789999999999877776
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc--cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL--GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~--~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~ 161 (641)
.++.|.+||.. ++.+..+. .+...+.++++++++.++++.+.++.|++||. +++.+..+..
T Consensus 140 ---------------~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~ 202 (286)
T 1q7f_A 140 ---------------KVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGG 202 (286)
T ss_dssp ---------------TTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESC
T ss_pred ---------------CCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEcc
Confidence 78999999964 66666664 45567899999999998888888999999997 4556666653
Q ss_pred C--CCCEEEEEEecCCCEEEEEeCCC-eEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC
Q psy9327 162 H--NHYVMCAQFHPTDDIVVSASLDQ-TIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 162 h--~~~V~sl~fsp~g~~lvSgs~Dg-tI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~ 238 (641)
+ ...+..++++|+|.++++.+.++ .|.+||... +....+..+
T Consensus 203 ~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g-~~~~~~~~~---------------------------------- 247 (286)
T 1q7f_A 203 EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG-QLISALESK---------------------------------- 247 (286)
T ss_dssp TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS-CEEEEEEES----------------------------------
T ss_pred CCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC-CEEEEEccc----------------------------------
Confidence 3 46789999999999999888886 999999543 222222100
Q ss_pred CCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcC
Q psy9327 239 KMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 239 ~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~ 278 (641)
.....+.+++++|+|..+++ +.++++.+|..
T Consensus 248 --------~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~ 278 (286)
T 1q7f_A 248 --------VKHAQCFDVALMDDGSVVLA-SKDYRLYIYRY 278 (286)
T ss_dssp --------SCCSCEEEEEEETTTEEEEE-ETTTEEEEEEC
T ss_pred --------CCCCcceeEEECCCCcEEEE-CCCCeEEEEEc
Confidence 01224567999999976665 55777777764
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.44 E-value=1.8e-11 Score=126.78 Aligned_cols=242 Identities=9% Similarity=-0.013 Sum_probs=166.2
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
+..|.+++|+|++..++..+.++.++.| .++....+..+...+.+++|+|++.+++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~------------------ 63 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDV------------------ 63 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEET------------------
T ss_pred ccccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEEC------------------
Confidence 4568899999998888777888999999 3555566666777889999999999877776
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC----CeEEEEECCCCeeEEEEc--cC
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD----QTIRIWYWQSRNCICVLT--GH 162 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D----g~I~vWd~~~~~~i~~l~--~h 162 (641)
.++.|.+||..+++.......+...+.+++|+|++.+++++..+ +.|.+||..++.....+. .+
T Consensus 64 ----------~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 133 (333)
T 2dg1_A 64 ----------FEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLST 133 (333)
T ss_dssp ----------TTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSS
T ss_pred ----------CCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCcc
Confidence 78999999999888665554567889999999999988887776 789999998876553443 34
Q ss_pred CCCEEEEEEecCCCEEEEEeC------CCeEEEEecCCCceeeeccCCCceeeec--ccCCCceeeeeeeeeeCCCeeEE
Q psy9327 163 NHYVMCAQFHPTDDIVVSASL------DQTIRVWDISGLRKKNVAPGMGKLVLSM--KSKHPIWKYCKPVKYCNPKHTLH 234 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~------DgtI~IWD~~~~~~~~~~~~~~~~v~s~--~~~~~v~~~~~~l~s~~~d~~I~ 234 (641)
...+.+++++|+|.++++.+. .+.|..||..+++......... ....+ ...... -..+...++.|.
T Consensus 134 ~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~i~~~~dg~~-----l~v~~~~~~~i~ 207 (333)
T 2dg1_A 134 AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNIS-VANGIALSTDEKV-----LWVTETTANRLH 207 (333)
T ss_dssp CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEES-SEEEEEECTTSSE-----EEEEEGGGTEEE
T ss_pred CCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCC-cccceEECCCCCE-----EEEEeCCCCeEE
Confidence 567999999999998887664 3556666665544332221110 11111 111100 012223467888
Q ss_pred EecC--CCcceeee--------cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEeccc
Q psy9327 235 ICNR--KMEPLCNI--------HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLD 287 (641)
Q Consensus 235 i~d~--~~~~~~~~--------~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d 287 (641)
+||. .+..+..+ .....+..++++++|...+++..++.+.+|+.+...+..+.
T Consensus 208 ~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~~ 270 (333)
T 2dg1_A 208 RIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQIL 270 (333)
T ss_dssp EEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEE
T ss_pred EEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCCCCEEEEEE
Confidence 8884 33322211 11236778999999987777667788888987655555543
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.6e-11 Score=141.44 Aligned_cols=257 Identities=7% Similarity=-0.041 Sum_probs=159.7
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCC-----cEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNG-----VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg-----~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
|...+.+++|||||++||.++.++ +|++||+.+++.+.... ....+.+++|+||++.|+.++.... .+.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~-~~~~~~~~~wspDg~~l~~~~~~~~---~~~-- 196 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQ---DGK-- 196 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-EEECSCCEEECTTSSEEEEEECCCC---SSC--
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc-cCcccceEEEEeCCCEEEEEEECCc---ccc--
Confidence 444688999999999998776543 89999999987655322 2233678999999999988761000 000
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCe----eEEEEccCCCCeEEEEEccCCCEEEEEeC-----CCeEEEEECCC-
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRK----CIFTLLGHLDYIRTTFFHHEYPWILSASD-----DQTIRIWYWQS- 152 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~----~~~~~~~h~~~V~~v~fsp~~~~l~sgs~-----Dg~I~vWd~~~- 152 (641)
.... .........|++|++.+++ .+.....|...+..+.|+|+|++|+.++. +..|++||+.+
T Consensus 197 ---~~~~----~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~ 269 (710)
T 2xdw_A 197 ---SDGT----ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQE 269 (710)
T ss_dssp ---CSSS----CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGS
T ss_pred ---cccc----ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccc
Confidence 0000 0000013349999998875 22233335667889999999999887765 67899999976
Q ss_pred -----Ce-eEEEEccCCCCEEEEEEecCCCEEEEEeCC----CeEEEEecCCCce---eeeccCCC-ceeeecccCCCce
Q psy9327 153 -----RN-CICVLTGHNHYVMCAQFHPTDDIVVSASLD----QTIRVWDISGLRK---KNVAPGMG-KLVLSMKSKHPIW 218 (641)
Q Consensus 153 -----~~-~i~~l~~h~~~V~sl~fsp~g~~lvSgs~D----gtI~IWD~~~~~~---~~~~~~~~-~~v~s~~~~~~v~ 218 (641)
+. ....+..+.+.+.. .|+|+|..|+..+.+ +.|.+||+.++.. ....+... ..+.++.....-
T Consensus 270 ~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~- 347 (710)
T 2xdw_A 270 SNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSN- 347 (710)
T ss_dssp SSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTT-
T ss_pred ccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCC-
Confidence 43 45667677776665 488999877766553 3699999987642 22223222 133322211000
Q ss_pred eeeeeeeeeCCCe--eEEEecC-CCcceeeecC-CcceEEEEEcCCccEEEEe-c---CCeEEEEEcCCCCe
Q psy9327 219 KYCKPVKYCNPKH--TLHICNR-KMEPLCNIHE-NTRVKSGAWDESGVFIYTT-S---NHIKYAIVNGDHGI 282 (641)
Q Consensus 219 ~~~~~l~s~~~d~--~I~i~d~-~~~~~~~~~~-~~~I~sla~~p~g~~L~t~-s---~~~k~~l~~~~~g~ 282 (641)
.-+.+...++ .|.+|+. .+..+..+.. ...+.+++++|++..++.+ + ..+.++.++..++.
T Consensus 348 ---~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 348 ---FLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp ---EEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred ---EEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 0123333344 4666774 4544444432 5567888999988655532 2 45788888876655
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.42 E-value=5e-12 Score=145.38 Aligned_cols=243 Identities=8% Similarity=-0.079 Sum_probs=157.9
Q ss_pred cCCCCeEEEEEccCCCeEEE-----EeCCCcEEEEECccCcccccccccccCe--EEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 7 TKSARVKGLSFHPKRPWILS-----SLHNGVIQLWDYRMNTLLEKFDEHEGPV--RGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Las-----g~~dg~I~iWD~~~~~~l~~~~~h~~~V--~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
+|...+.+++|||||++||. |+.+.+|++||+.+++.+.. .+-..+ .+++|+||++.|+.++
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~--~~~~~~~~~~~~wspDg~~l~~~~--------- 186 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV--DVIEGGKYATPKWTPDSKGFYYEW--------- 186 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS--CCBSCCTTCCCEECTTSSEEEEEE---------
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC--cccCcccccceEEecCCCEEEEEE---------
Confidence 45667999999999999983 34456899999999886511 122222 6799999999999886
Q ss_pred eeeecccCCcceeeEEEeeCCC-------------eEEEEECCCCe----eEEEEccCCCCeEEEEEccCCCEEEEEeCC
Q psy9327 80 CILESRNEPCLFRIKSVLGDDY-------------KIKVWNYKQRK----CIFTLLGHLDYIRTTFFHHEYPWILSASDD 142 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg-------------~I~vWD~~t~~----~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D 142 (641)
.|. .|++|++.++. .+.....|...+.++.|+|+|++++.++.+
T Consensus 187 -------------------~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 247 (695)
T 2bkl_A 187 -------------------LPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILR 247 (695)
T ss_dssp -------------------CCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEE
T ss_pred -------------------ecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeC
Confidence 443 49999998875 344444566788999999999988887766
Q ss_pred C----eEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEe---CCCeEEEEecCCCce---eeeccCC-Cceeeec
Q psy9327 143 Q----TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSAS---LDQTIRVWDISGLRK---KNVAPGM-GKLVLSM 211 (641)
Q Consensus 143 g----~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs---~DgtI~IWD~~~~~~---~~~~~~~-~~~v~s~ 211 (641)
+ .|++||..++. ...+..+...+....| |+|.+++++. .++.|.+||+.++.. ...++.. ...+.++
T Consensus 248 ~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~ 325 (695)
T 2bkl_A 248 GWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSV 325 (695)
T ss_dssp TTTEEEEEEECTTCSS-CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEE
T ss_pred CCCceEEEEEcCCCCc-eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEE
Confidence 5 67777765554 3445556666667767 5555555544 258999999987653 3333322 2223222
Q ss_pred ccCCCceeeeeeeeeeCCCeeEEEec--CCCcceeeec--CCcceEEEEEcCCccEEEE----ecCCeEEEEEcCCCCeE
Q psy9327 212 KSKHPIWKYCKPVKYCNPKHTLHICN--RKMEPLCNIH--ENTRVKSGAWDESGVFIYT----TSNHIKYAIVNGDHGII 283 (641)
Q Consensus 212 ~~~~~v~~~~~~l~s~~~d~~I~i~d--~~~~~~~~~~--~~~~I~sla~~p~g~~L~t----~s~~~k~~l~~~~~g~I 283 (641)
..... ..+.+...++..++|. ..+.....+. +...+..++++|++..++. ....+.+++|+..++..
T Consensus 326 ~~~~~-----~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 326 SIVGG-----HLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEETT-----EEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEECC-----EEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 21111 1134444566655554 3344333332 3556778889998876662 23457888998877765
Q ss_pred ecc
Q psy9327 284 RTL 286 (641)
Q Consensus 284 ~~~ 286 (641)
+.+
T Consensus 401 ~~l 403 (695)
T 2bkl_A 401 ELW 403 (695)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.42 E-value=8.3e-12 Score=131.87 Aligned_cols=243 Identities=9% Similarity=0.011 Sum_probs=162.9
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEe----------CCCcEEEEECccCccccccccc------ccCeEEEEEeCCCCEEE
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSL----------HNGVIQLWDYRMNTLLEKFDEH------EGPVRGICFHNQQPIFV 67 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~----------~dg~I~iWD~~~~~~l~~~~~h------~~~V~~i~fsp~~~~l~ 67 (641)
++..+..+ .++|||||++++++. .+++|.+||..+++.+.++... ......++|+|++++++
T Consensus 46 ~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~ 123 (361)
T 2oiz_A 46 MVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIV 123 (361)
T ss_dssp EEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEE
T ss_pred EecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEE
Confidence 44444444 899999999999886 3678999999988887776532 34567899999999999
Q ss_pred EeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEE-EccCCCCeEEEEEccCC-CEEEEEeCCCeE
Q psy9327 68 SGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT-LLGHLDYIRTTFFHHEY-PWILSASDDQTI 145 (641)
Q Consensus 68 sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~-~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~I 145 (641)
++.. +.+++|.+||..+++.+.+ +. +. ....+.+.|++ ..+++.+.||++
T Consensus 124 v~n~--------------------------~~~~~v~v~d~~~~~~~~~~i~-~~-~~~~v~~~p~~~~~~~~~~~dg~~ 175 (361)
T 2oiz_A 124 LQNA--------------------------SPATSIGIVDVAKGDYVEDVTA-AA-GCWSVIPQPNRPRSFMTICGDGGL 175 (361)
T ss_dssp EEEE--------------------------SSSEEEEEEETTTTEEEEEEGG-GT-TEEEEEECTTSSSEEEEEETTSSE
T ss_pred EECC--------------------------CCCCeEEEEECCCCcEEEEEec-CC-CcceeEEcCCCCeeEEEECCCCcE
Confidence 8861 1268999999999998887 54 32 22346677765 678899999999
Q ss_pred EEEECCC-CeeEEE------EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCcee--eeccC------------C
Q psy9327 146 RIWYWQS-RNCICV------LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK--NVAPG------------M 204 (641)
Q Consensus 146 ~vWd~~~-~~~i~~------l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~--~~~~~------------~ 204 (641)
.+|+... ++.... +..+..++ .+.++|++..++..+.++.+.+||+...... ..+.- .
T Consensus 176 ~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~ 254 (361)
T 2oiz_A 176 LTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPG 254 (361)
T ss_dssp EEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEEC
T ss_pred EEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccC
Confidence 9999865 544422 22222332 3345778888888889999999999754321 11100 0
Q ss_pred CceeeecccC-CCceeeeeeeeeeC------CCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEE
Q psy9327 205 GKLVLSMKSK-HPIWKYCKPVKYCN------PKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIV 276 (641)
Q Consensus 205 ~~~v~s~~~~-~~v~~~~~~l~s~~------~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~ 276 (641)
+...+.+... ..++-... . .+. ..+.|.+|| .+.+.+..+..+. ..+++|+|+|++|++++. +.+.+|
T Consensus 255 g~~~~a~~~dg~~lyv~~~-~-~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~ 330 (361)
T 2oiz_A 255 GYNLVGLHRASGRMYVFMH-P-DGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVY 330 (361)
T ss_dssp CSSCEEEETTTTEEEEEEE-S-SCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEE
T ss_pred CeeEEEEecCCCeEEEEEc-c-CCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEE
Confidence 1001111111 11110000 0 000 135899999 5667777777666 999999999999998886 889999
Q ss_pred cCCCC
Q psy9327 277 NGDHG 281 (641)
Q Consensus 277 ~~~~g 281 (641)
+..++
T Consensus 331 D~~t~ 335 (361)
T 2oiz_A 331 DISQP 335 (361)
T ss_dssp ECSSS
T ss_pred ECCCC
Confidence 88777
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.41 E-value=1.6e-11 Score=127.69 Aligned_cols=240 Identities=9% Similarity=0.037 Sum_probs=139.2
Q ss_pred CCeEEEEEccCCCeEEEEeCC---Cc--EEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee-e
Q psy9327 10 ARVKGLSFHPKRPWILSSLHN---GV--IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL-E 83 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~d---g~--I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~-~ 83 (641)
..+.+++|||||++|+.++.+ +. |.+||+.+++...... +.. +.+++|+|+++.|+.++......-...+. .
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEE-ESE-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 357789999999999887754 33 7777887776544333 334 99999999999988876210000000000 0
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCC-------eEEEEECCCCeeE
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ-------TIRIWYWQSRNCI 156 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg-------~I~vWd~~~~~~i 156 (641)
.........+ .......|.+||+.+++.+..+.. . .+..++|+|++ ++++++.+. ...+|.+.+++.
T Consensus 137 ~~~~~~g~~~--~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~- 210 (347)
T 2gop_A 137 VPAWFDDLGF--FDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE- 210 (347)
T ss_dssp CCCC-----------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-
T ss_pred cceeecCccc--ccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-
Confidence 0000000000 001235799999999987455554 3 78899999999 777776542 334444435553
Q ss_pred EEEccCCCCEEEEEEecCCCEEEEEeCC--------CeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeC
Q psy9327 157 CVLTGHNHYVMCAQFHPTDDIVVSASLD--------QTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCN 228 (641)
Q Consensus 157 ~~l~~h~~~V~sl~fsp~g~~lvSgs~D--------gtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~ 228 (641)
..+..+ ..+.++ +|+|+.|+.++.+ ..|.+|| +++......++...+.+. +.|. ..-+.++.
T Consensus 211 ~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~----~~~s-dg~~~~~~ 280 (347)
T 2gop_A 211 EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQA----KIKD-GKVYFTLF 280 (347)
T ss_dssp EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEE----EEET-TEEEEEEE
T ss_pred EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCc----cEEc-CcEEEEEe
Confidence 344444 555554 9999988877754 3688888 555444444444444320 1222 11234455
Q ss_pred CCeeEEEecCC-CcceeeecCCcceEEEEEcCCccEEEEecCC
Q psy9327 229 PKHTLHICNRK-MEPLCNIHENTRVKSGAWDESGVFIYTTSNH 270 (641)
Q Consensus 229 ~d~~I~i~d~~-~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~ 270 (641)
.++.+++| .. +...........|.+++|+| ..+++++.+
T Consensus 281 ~~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~--~~~~~~~~~ 320 (347)
T 2gop_A 281 EEGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE--IVVYLKETA 320 (347)
T ss_dssp ETTEEEEE-EESSSEEEEECSSSEEEEEEESS--SEEEEEECS
T ss_pred cCCcEEEE-EcCCceEEEecCCCeEEeeeeeC--cEEEEEcCC
Confidence 66677776 43 33333344466788999999 455555543
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.40 E-value=5.8e-11 Score=118.74 Aligned_cols=233 Identities=5% Similarity=-0.081 Sum_probs=152.9
Q ss_pred CeEEEEEccCCCeEE-EEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 11 RVKGLSFHPKRPWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 11 ~V~~l~fspdg~~La-sg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
...+++++|+|++++ +.+.++.|..||..++........+...+.++++++++.++++.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~-------------------- 84 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTD-------------------- 84 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEE--------------------
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEc--------------------
Confidence 678999999999766 44678999999976554322222334567899999999855554
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEc-cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLL-GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMC 168 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~-~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~s 168 (641)
.++.|.+||...+... .+. .....+.++++++++.++++...++.|.+|+..+.........+...+.+
T Consensus 85 ---------~~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~ 154 (270)
T 1rwi_B 85 ---------FNNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDG 154 (270)
T ss_dssp ---------TTTEEEEECTTCSCCE-ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCC
T ss_pred ---------CCCEEEEEeCCCceEe-eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCcee
Confidence 4789999998765433 332 33467899999999998888888899999987665543333334456789
Q ss_pred EEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecc--cCCCceeeeeeeeeeCCCeeEEEecCCCcceeee
Q psy9327 169 AQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMK--SKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNI 246 (641)
Q Consensus 169 l~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~--~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~ 246 (641)
++++|+|.++++...++.|.+||..+................+. ....+ ..+...++.|..|+.........
T Consensus 155 i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l------~v~~~~~~~v~~~~~~~~~~~~~ 228 (270)
T 1rwi_B 155 VAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTV------YVTEHNTNQVVKLLAGSTTSTVL 228 (270)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCE------EEEETTTSCEEEECTTCSCCEEC
T ss_pred EEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCE------EEEECCCCcEEEEcCCCCcceee
Confidence 99999999888877789999999987654432221111122211 11111 22333567888888554433333
Q ss_pred cC--CcceEEEEEcCCccEEEEecCCeEEEEEcCC
Q psy9327 247 HE--NTRVKSGAWDESGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 247 ~~--~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~ 279 (641)
.. ...+.+++++++|...++...++++.++..+
T Consensus 229 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 229 PFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp CCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred ccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 22 2567889999998866666666666666543
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.40 E-value=5.9e-11 Score=125.29 Aligned_cols=272 Identities=9% Similarity=0.025 Sum_probs=173.4
Q ss_pred CCCeEEEEe------CCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceee
Q psy9327 20 KRPWILSSL------HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRI 93 (641)
Q Consensus 20 dg~~Lasg~------~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~ 93 (641)
++.++++.. .|+.|.+||..+++.+..+..+..+ .++|+|++++++++..... .
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~------------------~ 73 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHE------------------R 73 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEET------------------T
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEeccc------------------c
Confidence 556666553 3789999999999988888777766 8999999999998851000 0
Q ss_pred EEEeeCCCeEEEEECCCCeeEEEEccC------CCCeEEEEEccCCCEEEEEeC--CCeEEEEECCCCeeEEE-EccCCC
Q psy9327 94 KSVLGDDYKIKVWNYKQRKCIFTLLGH------LDYIRTTFFHHEYPWILSASD--DQTIRIWYWQSRNCICV-LTGHNH 164 (641)
Q Consensus 94 ~~~~s~Dg~I~vWD~~t~~~~~~~~~h------~~~V~~v~fsp~~~~l~sgs~--Dg~I~vWd~~~~~~i~~-l~~h~~ 164 (641)
..-+..++.|.+||..+++.+.++... ......++|+|+++++++++. +++|.+||..+++.+.. +. +.+
T Consensus 74 ~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~-~~~ 152 (361)
T 2oiz_A 74 ITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA-AAG 152 (361)
T ss_dssp SSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG-GTT
T ss_pred cccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec-CCC
Confidence 000013678999999999988887632 245678999999999988863 68999999999998877 54 222
Q ss_pred CEEEEEEecCC-CEEEEEeCCCeEEEEecCC-CceeeeccCCCceeeecccCCCceeee----eeeeeeCCCeeEEEecC
Q psy9327 165 YVMCAQFHPTD-DIVVSASLDQTIRVWDISG-LRKKNVAPGMGKLVLSMKSKHPIWKYC----KPVKYCNPKHTLHICNR 238 (641)
Q Consensus 165 ~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~-~~~~~~~~~~~~~v~s~~~~~~v~~~~----~~l~s~~~d~~I~i~d~ 238 (641)
...+.+.|++ ..+++.+.||++.+|++.. ++....... ..+.. ....|++... ..+...+.++.+.++|.
T Consensus 153 -~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~--~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~ 228 (361)
T 2oiz_A 153 -CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRS--KQMFS-VKDDPIFIAPALDKDKAHFVSYYGNVYSADF 228 (361)
T ss_dssp -EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEEC--CCCSC-TTTSCBCSCCEECSSEEEEEBTTSEEEEEEC
T ss_pred -cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccc--cceEc-CCCCceEEEecccCCEEEEEeCCCeEEEEEe
Confidence 2335677876 6888999999999999865 443311100 00000 0001111000 01222335667888884
Q ss_pred CCcce---eeec--------CC---cceEEEEEcCCccEEEEecC-----------CeEEEEEcCCCCeE-ecccc--ce
Q psy9327 239 KMEPL---CNIH--------EN---TRVKSGAWDESGVFIYTTSN-----------HIKYAIVNGDHGII-RTLDL--PI 290 (641)
Q Consensus 239 ~~~~~---~~~~--------~~---~~I~sla~~p~g~~L~t~s~-----------~~k~~l~~~~~g~I-~~~d~--p~ 290 (641)
..... ..+. .. .....++++|++..++.+.. ...+.+|+..++.+ ..+.. |.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~p~ 308 (361)
T 2oiz_A 229 SGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRDAL 308 (361)
T ss_dssp SSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTTCC
T ss_pred cCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCCee
Confidence 32211 1110 00 11112689999888887643 34788998877653 33322 32
Q ss_pred E-EEEEcCcEEEEEeCCCCeEEEEeCCc
Q psy9327 291 Y-ITKIKGNQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 291 ~-~~~~~g~~v~~~~~dg~i~v~~~~~~ 317 (641)
. .+..+|..+++.+. +.+.+|+..+.
T Consensus 309 ~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 309 SMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred EEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 2 24567889998887 99999988876
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.38 E-value=3.5e-12 Score=134.71 Aligned_cols=239 Identities=8% Similarity=-0.016 Sum_probs=142.3
Q ss_pred EEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceee
Q psy9327 14 GLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRI 93 (641)
Q Consensus 14 ~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~ 93 (641)
.+.|+|||++|+.++.++.|.+||..+++....+..+.+ |+|++..++..+......... ......|+....
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~------~~~~g~~l~~~~~~~~~~~~~--~~~~~spdg~~~ 156 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEE------WKGYGTWVANSDCTKLVGIEI--LKRDWQPLTSWE 156 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT------EEEEEEEEECTTSSEEEEEEE--EGGGCCCCCSHH
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccc------cCCCCCEEEeccCCccccccc--cccccCCCCcce
Confidence 378999999999999999999999988865444443333 555555555443111100000 001112222111
Q ss_pred EEEe----eCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeCC------CeEEEEECCCCeeEEEEccC
Q psy9327 94 KSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH-EYPWILSASDD------QTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 94 ~~~~----s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~D------g~I~vWd~~~~~~i~~l~~h 162 (641)
.... ..+..|.+||+.+++..... .+...+..+.|+| ++..|+.++.+ ..|.+||...++.. .+..+
T Consensus 157 ~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~ 234 (396)
T 3c5m_A 157 KFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEH 234 (396)
T ss_dssp HHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCC
T ss_pred eeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-Eeecc
Confidence 1111 35678999999988765544 4677899999999 78877766543 46889998765533 33333
Q ss_pred --CCCEEEEEEecCCCEEEEEeCC-----CeEEEEecCCCceeeeccCCCceeeeccc-CCCceeeeeeeeee-------
Q psy9327 163 --NHYVMCAQFHPTDDIVVSASLD-----QTIRVWDISGLRKKNVAPGMGKLVLSMKS-KHPIWKYCKPVKYC------- 227 (641)
Q Consensus 163 --~~~V~sl~fsp~g~~lvSgs~D-----gtI~IWD~~~~~~~~~~~~~~~~v~s~~~-~~~v~~~~~~l~s~------- 227 (641)
...+..+.|+|+|+.|+.++.+ +.|++||+.+++........+.. ..... .... ++..
T Consensus 235 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~-~~~s~~dg~~------l~~~~~~~p~~ 307 (396)
T 3c5m_A 235 AEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCS-HLMSNFDGSL------MVGDGCDAPVD 307 (396)
T ss_dssp CTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEE-EEEECSSSSE------EEEEECCC---
T ss_pred CCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCC-CCccCCCCce------EEEecCCccee
Confidence 2358889999999987776554 45999999887654332211111 11111 1111 1111
Q ss_pred ---------CCCeeEEEecCCCcceeeecC-Cc-----------ceEEEEEcCCccEEEEecC
Q psy9327 228 ---------NPKHTLHICNRKMEPLCNIHE-NT-----------RVKSGAWDESGVFIYTTSN 269 (641)
Q Consensus 228 ---------~~d~~I~i~d~~~~~~~~~~~-~~-----------~I~sla~~p~g~~L~t~s~ 269 (641)
..+..|.+||........+.. .. .+.+.+|+|+|..|+.++.
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 308 VADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp -------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred eccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEec
Confidence 134689999944332223322 22 2566899999998887663
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.2e-11 Score=130.94 Aligned_cols=152 Identities=6% Similarity=0.007 Sum_probs=121.0
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc----------cccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL----------LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~----------l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
.+++.|++++.+.++++|+.++ +++|+...... ......+.+ |+.++| ++.+|+++
T Consensus 38 ~~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~---------- 103 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS---------- 103 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE----------
T ss_pred ccccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE----------
Confidence 3699999999999999999986 66699764431 111223556 999999 88999988
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l 159 (641)
.++.|++||+.+.........|..++.++.+.+.. +++++.||.+.+||++++....
T Consensus 104 -------------------~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~-- 160 (388)
T 1xip_A 104 -------------------TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ-- 160 (388)
T ss_dssp -------------------ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE--
T ss_pred -------------------cCCcEEEEEchhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc--
Confidence 47899999998776666677788889888776553 9999999999999999887643
Q ss_pred ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce--eeecc
Q psy9327 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK--KNVAP 202 (641)
Q Consensus 160 ~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~--~~~~~ 202 (641)
+...|+|++|||+| ++.|..||++++|+..+... +.+++
T Consensus 161 --~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~ 201 (388)
T 1xip_A 161 --LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFS 201 (388)
T ss_dssp --EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEEC
T ss_pred --ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceec
Confidence 44689999999999 67899999999999988764 44443
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.3e-10 Score=118.00 Aligned_cols=210 Identities=9% Similarity=-0.020 Sum_probs=151.2
Q ss_pred CCCeEEEEeCCCcEEEEECccCcccccccccc-cCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEee
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHE-GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLG 98 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~-~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s 98 (641)
.+++|++++.|+.|++||.++|+.+.++..+. ..+.+++++|+|+++++
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs------------------------------ 53 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS------------------------------ 53 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE------------------------------
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe------------------------------
Confidence 45789999999999999998999999998776 57899999999998883
Q ss_pred CCCeEEEEECCCCeeEEEEccCC-CCeEEEEEccCCCEEEEEeC-CCeEEEEECCCCeeEEEEc------cCCCCEEEEE
Q psy9327 99 DDYKIKVWNYKQRKCIFTLLGHL-DYIRTTFFHHEYPWILSASD-DQTIRIWYWQSRNCICVLT------GHNHYVMCAQ 170 (641)
Q Consensus 99 ~Dg~I~vWD~~t~~~~~~~~~h~-~~V~~v~fsp~~~~l~sgs~-Dg~I~vWd~~~~~~i~~l~------~h~~~V~sl~ 170 (641)
.++.|..||. +|+.+..+..+. ..+.++.+.++|..+++.+. ++.|..+|. +++.+..+. ++......+.
T Consensus 54 ~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~ 131 (276)
T 3no2_A 54 YSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQIN 131 (276)
T ss_dssp CBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCE
T ss_pred CCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCce
Confidence 4677999998 899999998753 57889999999999999887 888888885 677666654 2223455667
Q ss_pred EecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC-CcceeeecCC
Q psy9327 171 FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK-MEPLCNIHEN 249 (641)
Q Consensus 171 fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~-~~~~~~~~~~ 249 (641)
+.++|+++++.+.++.|..||.. ++.+-.+...+........... ..+.++..++.|..+|.. ++.+..+...
T Consensus 132 ~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g-----~~~v~~~~~~~v~~~d~~tG~~~w~~~~~ 205 (276)
T 3no2_A 132 KNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNG-----DCLVACGDAHCFVQLNLESNRIVRRVNAN 205 (276)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTS-----CEEEECBTTSEEEEECTTTCCEEEEEEGG
T ss_pred ECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCC-----CEEEEeCCCCeEEEEeCcCCcEEEEecCC
Confidence 89999999999999999999998 7776665532111110000000 013334455667777755 6666555421
Q ss_pred -------cceEEEEEcCCccEEEEe
Q psy9327 250 -------TRVKSGAWDESGVFIYTT 267 (641)
Q Consensus 250 -------~~I~sla~~p~g~~L~t~ 267 (641)
..+.+++..++|..+++.
T Consensus 206 ~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 206 DIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp GSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CCCCccccccccceEcCCCCEEEEe
Confidence 125566666776666554
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.35 E-value=4.3e-11 Score=138.59 Aligned_cols=257 Identities=9% Similarity=0.007 Sum_probs=158.5
Q ss_pred CCCCeEEEEEccCCCeEEEEeCC-----CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHN-----GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~d-----g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
|...+.+++|||||++||.++.+ .+|++||+.+++.+.. ..+...+.+++|+|| ..|+.+..... ..+
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~--~~~--- 233 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEP--KEG--- 233 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCc--ccc---
Confidence 33468899999999999877654 3599999999976543 122223357899999 88887751000 000
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCee--EEEEc--cCCCCeEEEEEccCCCEEEEEeCCC-----eEEEEECCCC
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLL--GHLDYIRTTFFHHEYPWILSASDDQ-----TIRIWYWQSR 153 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~--~~~~~--~h~~~V~~v~fsp~~~~l~sgs~Dg-----~I~vWd~~~~ 153 (641)
...........|.+|++.++.. ...+. .+...+..+.|+|+|++|+..+.++ .|++||+.++
T Consensus 234 ---------~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 234 ---------QAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp --------------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred ---------cccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCC
Confidence 0000001134699999987652 23333 3444688999999999888777544 8999999877
Q ss_pred --eeEEEEccCCCCEEEEEEecCCCEEEEEeCC----CeEEEEecCCC--ceeeeccCCCceeeecccCCCceeeeeeee
Q psy9327 154 --NCICVLTGHNHYVMCAQFHPTDDIVVSASLD----QTIRVWDISGL--RKKNVAPGMGKLVLSMKSKHPIWKYCKPVK 225 (641)
Q Consensus 154 --~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~D----gtI~IWD~~~~--~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~ 225 (641)
++...+..+...+.... +|+|..|+..+.+ +.|.+||+.++ +....++.....+.++..... .-+.
T Consensus 305 ~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~-----~lv~ 378 (741)
T 1yr2_A 305 KIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGN-----RLFA 378 (741)
T ss_dssp EECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBT-----EEEE
T ss_pred CCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECC-----EEEE
Confidence 32455666666665554 4889888877764 45999999874 334444443333322211110 1133
Q ss_pred eeCCCeeEEEe--cCCCcceeeec--CCcceEEEEEcCCccEEEE----ecCCeEEEEEcCCCCeEecc
Q psy9327 226 YCNPKHTLHIC--NRKMEPLCNIH--ENTRVKSGAWDESGVFIYT----TSNHIKYAIVNGDHGIIRTL 286 (641)
Q Consensus 226 s~~~d~~I~i~--d~~~~~~~~~~--~~~~I~sla~~p~g~~L~t----~s~~~k~~l~~~~~g~I~~~ 286 (641)
+...++..++| +..+.....+. +...+..++++|++..++. ....+.+++|+..++..+.+
T Consensus 379 ~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 379 SYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp EEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred EEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 44445554554 44444444443 3567888999998775552 23467889998888776655
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=3.9e-11 Score=124.71 Aligned_cols=158 Identities=8% Similarity=0.081 Sum_probs=127.4
Q ss_pred cCCCCeEEEEEcc-CCCeEEEEe-CCCcEEEEECccCcccccccc----------cccCeEEEEEeCC-CCEEEEeceee
Q psy9327 7 TKSARVKGLSFHP-KRPWILSSL-HNGVIQLWDYRMNTLLEKFDE----------HEGPVRGICFHNQ-QPIFVSGGKMI 73 (641)
Q Consensus 7 ~H~~~V~~l~fsp-dg~~Lasg~-~dg~I~iWD~~~~~~l~~~~~----------h~~~V~~i~fsp~-~~~l~sgs~~~ 73 (641)
++-....+++|+| ++.++++.+ .++.|++|| .+++.+..+.. +-....+|+++|+ +.++++..
T Consensus 140 ~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~--- 215 (329)
T 3fvz_A 140 NHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR--- 215 (329)
T ss_dssp TCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET---
T ss_pred cccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC---
Confidence 4555789999999 788888886 699999999 56777766643 2234899999998 66656655
Q ss_pred EEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc--cCCCCeEEEEEccCCCEEEEE-------eCCCe
Q psy9327 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL--GHLDYIRTTFFHHEYPWILSA-------SDDQT 144 (641)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~--~h~~~V~~v~fsp~~~~l~sg-------s~Dg~ 144 (641)
.++.|++||..+|+.+.++. .+...+.+++|+| +..+++. +.+.+
T Consensus 216 -------------------------~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~ 269 (329)
T 3fvz_A 216 -------------------------ENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQ 269 (329)
T ss_dssp -------------------------TTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCC
T ss_pred -------------------------CCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcE
Confidence 88999999999899888884 4667889999999 4334433 33458
Q ss_pred EEEEECCCCeeEEEE---ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 145 IRIWYWQSRNCICVL---TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 145 I~vWd~~~~~~i~~l---~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
|++||..+++.+..+ .++...+..++++|+|.++++.+.+++|++|++..
T Consensus 270 v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 270 GFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 999999999999888 46788899999999998889999999999999865
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.3e-08 Score=102.66 Aligned_cols=241 Identities=9% Similarity=-0.002 Sum_probs=161.6
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccc-cccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLE-KFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~-~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
.....+.+++++++|.+.++...++.|..||.. ++... .+..+...+.++++.+++.+.++..
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~--------------- 80 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTEN--------------- 80 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEET---------------
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEec---------------
Confidence 345688999999999977777778999999977 54332 1223346789999999998777765
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEE-EEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE-EEccCC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIF-TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC-VLTGHN 163 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~-~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~-~l~~h~ 163 (641)
.++.|..||.. ++... ........+.++++.+++.++++...++.|..||.. ++... .+....
T Consensus 81 -------------~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~ 145 (300)
T 2qc5_A 81 -------------GANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKG 145 (300)
T ss_dssp -------------TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTT
T ss_pred -------------CCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCC
Confidence 67899999988 65432 223344678999999999988888778999999987 55432 233345
Q ss_pred CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeee-ccCCCceeeecc--cCCCceeeeeeeeeeCCCeeEEEecCCC
Q psy9327 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNV-APGMGKLVLSMK--SKHPIWKYCKPVKYCNPKHTLHICNRKM 240 (641)
Q Consensus 164 ~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~-~~~~~~~v~s~~--~~~~v~~~~~~l~s~~~d~~I~i~d~~~ 240 (641)
..+.++++.+++.+.++...++.|..||. +++.... .+........+. ....+| .+....+.|..+|..+
T Consensus 146 ~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~------v~~~~~~~i~~~~~~g 218 (300)
T 2qc5_A 146 SYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALW------FVEIMGNKIGRITTTG 218 (300)
T ss_dssp CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEE------EEETTTTEEEEECTTC
T ss_pred CCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEE------EEccCCCEEEEEcCCC
Confidence 67899999999997777777889999998 4443322 222112222211 111121 1222455688888643
Q ss_pred cceee-ec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEecc
Q psy9327 241 EPLCN-IH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTL 286 (641)
Q Consensus 241 ~~~~~-~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~ 286 (641)
..... .. ....+.+++++++|...++...++.+..++. ++.+..+
T Consensus 219 ~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~ 265 (300)
T 2qc5_A 219 EISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEY 265 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEE
T ss_pred cEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEE
Confidence 32222 11 2456789999999985555556678888876 4555544
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=4.3e-09 Score=117.54 Aligned_cols=237 Identities=9% Similarity=0.068 Sum_probs=164.7
Q ss_pred CeEEEEEccCCCeEEEEeCCCcEEEEECc--cCcccccccccccCeEEEEEe----CCCCEEEEeceeeEEeeeceeeec
Q psy9327 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYR--MNTLLEKFDEHEGPVRGICFH----NQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~dg~I~iWD~~--~~~~l~~~~~h~~~V~~i~fs----p~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
.+.++.|+|||+++++++.||.|.+||+. +++.+.++....+ ...++|+ |+|+++++++.
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P~~ia~s~~~~pDGk~l~v~n~------------- 263 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-ARSIETSKMEGWEDKYAIAGAY------------- 263 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-EEEEEECCSTTCTTTEEEEEEE-------------
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-CceeEEccccCCCCCEEEEEEc-------------
Confidence 56799999999999999999999999995 7777777765443 5789999 69999999873
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc----------CCC-CeEEEEEccCCCE-EEEEeCCCeEEEEECCC
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG----------HLD-YIRTTFFHHEYPW-ILSASDDQTIRIWYWQS 152 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~----------h~~-~V~~v~fsp~~~~-l~sgs~Dg~I~vWd~~~ 152 (641)
.+++|.|+|..+.+.+.++.. |.. .+..+.++++++. +++..++|.|.++|+.+
T Consensus 264 --------------~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~ 329 (567)
T 1qks_A 264 --------------WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTD 329 (567)
T ss_dssp --------------ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTC
T ss_pred --------------cCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCC
Confidence 789999999999998887652 222 6788999998774 45556779999999987
Q ss_pred CeeE--EEEccCCCCEEEEEEecCCCEEEEEe-CCCeEEEEecCCCceeeeccC-C-----Cceeeecc-cCCCceeeee
Q psy9327 153 RNCI--CVLTGHNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDISGLRKKNVAPG-M-----GKLVLSMK-SKHPIWKYCK 222 (641)
Q Consensus 153 ~~~i--~~l~~h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~~~~~~~~~~-~-----~~~v~s~~-~~~~v~~~~~ 222 (641)
.+.. ..+ ........+.|+|+++++++++ .+++|.++|..+++.....+. . +....-.. ...++|.
T Consensus 330 ~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~--- 405 (567)
T 1qks_A 330 LNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWA--- 405 (567)
T ss_dssp SSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEE---
T ss_pred Cccceeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEE---
Confidence 5422 222 2345677889999999877665 578999999999887665542 1 00110000 0122221
Q ss_pred eeeeeCCCeeEEEecCC--------CcceeeecCC-cceEEEEEcCCccEEEEecC-------CeEEEEEcCCCC
Q psy9327 223 PVKYCNPKHTLHICNRK--------MEPLCNIHEN-TRVKSGAWDESGVFIYTTSN-------HIKYAIVNGDHG 281 (641)
Q Consensus 223 ~l~s~~~d~~I~i~d~~--------~~~~~~~~~~-~~I~sla~~p~g~~L~t~s~-------~~k~~l~~~~~g 281 (641)
.+...++.|.++|.. .+.+..+... ..-.-+..+|++.++|.... ...+.+++..+.
T Consensus 406 --t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 406 --TSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp --EEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred --eCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 112256789999833 3344554432 22233678999999998662 246777775544
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.26 E-value=2.1e-09 Score=111.67 Aligned_cols=237 Identities=9% Similarity=-0.048 Sum_probs=157.4
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
....++.++ ++.+.++...++.|.+||..+++.+.++. .......+++++++...++..
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~------------------- 102 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQI------------------- 102 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEB-------------------
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEEC-------------------
Confidence 346778875 34455566668999999999999888884 456788999999986555553
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCC-----CCeEEEEEccCCCEEEEEe-CCCeEEEEECCCCeeEEEEccCC
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL-----DYIRTTFFHHEYPWILSAS-DDQTIRIWYWQSRNCICVLTGHN 163 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~-----~~V~~v~fsp~~~~l~sgs-~Dg~I~vWd~~~~~~i~~l~~h~ 163 (641)
.++.|.+||..+++...++.... .....+++ .++.++++.. .+++|.+||..+++.+.++...
T Consensus 103 ---------~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g- 171 (328)
T 3dsm_A 103 ---------WDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG- 171 (328)
T ss_dssp ---------SCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-
T ss_pred ---------CCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-
Confidence 68999999999999887776433 14556777 4454455544 4899999999999988777643
Q ss_pred CCEEEEEEecCCCEEEEEeCC----------CeEEEEecCCCceeeeccCC-Cceeeec--ccCCCceeeeeeeeeeCCC
Q psy9327 164 HYVMCAQFHPTDDIVVSASLD----------QTIRVWDISGLRKKNVAPGM-GKLVLSM--KSKHPIWKYCKPVKYCNPK 230 (641)
Q Consensus 164 ~~V~sl~fsp~g~~lvSgs~D----------gtI~IWD~~~~~~~~~~~~~-~~~v~s~--~~~~~v~~~~~~l~s~~~d 230 (641)
.....+.++|+|++++++..+ +.|.+||..+++....+... +.....+ ...... +..+..
T Consensus 172 ~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~------lyv~~~- 244 (328)
T 3dsm_A 172 IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDT------LYWINN- 244 (328)
T ss_dssp SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCE------EEEESS-
T ss_pred CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCE------EEEEcc-
Confidence 345688999999987777665 79999999988776554311 1111111 111110 111112
Q ss_pred eeEEEecCCCccee---eecC-CcceEEEEEcCCccEEEEe-----cCCeEEEEEcCCCCeEecc
Q psy9327 231 HTLHICNRKMEPLC---NIHE-NTRVKSGAWDESGVFIYTT-----SNHIKYAIVNGDHGIIRTL 286 (641)
Q Consensus 231 ~~I~i~d~~~~~~~---~~~~-~~~I~sla~~p~g~~L~t~-----s~~~k~~l~~~~~g~I~~~ 286 (641)
.+.++|.....+. .+.. ......++++|++..++.+ ..++.+.+|+.+...+..+
T Consensus 245 -~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~i 308 (328)
T 3dsm_A 245 -DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEF 308 (328)
T ss_dssp -SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEEE
T ss_pred -EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEEE
Confidence 7888884322221 1222 4567889999954445444 4678888888774445444
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=9.9e-10 Score=126.46 Aligned_cols=241 Identities=12% Similarity=0.029 Sum_probs=147.6
Q ss_pred cCCCeEEEEeCC-C----cEEEEECccCcccc-----cc-cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 19 PKRPWILSSLHN-G----VIQLWDYRMNTLLE-----KF-DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 19 pdg~~Lasg~~d-g----~I~iWD~~~~~~l~-----~~-~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
|+|.+++....+ + .+.+.+...++... .+ .+|...+.+++|||||++|+.+...
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~--------------- 145 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSA--------------- 145 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEE---------------
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcC---------------
Confidence 889987765433 2 23333433343211 11 2344578999999999999987510
Q ss_pred CcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCe----------------EEEEECC
Q psy9327 88 PCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQT----------------IRIWYWQ 151 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~----------------I~vWd~~ 151 (641)
.++....|++||+.+++.+.....+ ..+..++|+||++.|+.++.|+. |++|++.
T Consensus 146 --------~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~ 216 (710)
T 2xdw_A 146 --------SGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLG 216 (710)
T ss_dssp --------TTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETT
T ss_pred --------CCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECC
Confidence 0011238999999999876643222 23667999999999999888766 9999998
Q ss_pred CCe----eEEEEccCCCCEEEEEEecCCCEEEEEeC-----CCeEEEEecCC------Cc-eeeeccCCCceeeecccCC
Q psy9327 152 SRN----CICVLTGHNHYVMCAQFHPTDDIVVSASL-----DQTIRVWDISG------LR-KKNVAPGMGKLVLSMKSKH 215 (641)
Q Consensus 152 ~~~----~i~~l~~h~~~V~sl~fsp~g~~lvSgs~-----DgtI~IWD~~~------~~-~~~~~~~~~~~v~s~~~~~ 215 (641)
+++ .+.....|...+..+.|+|||++|+.++. +..|++||+.+ +. ....+..+...+..
T Consensus 217 t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~----- 291 (710)
T 2xdw_A 217 TDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD----- 291 (710)
T ss_dssp SCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-----
T ss_pred CCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-----
Confidence 865 33333345667889999999999887765 67899999976 42 23333322211111
Q ss_pred Cceeeee-eeee-eC---CCeeEEEecCCC-c--ceeee-cCC--cceEEEEEcCCccEEEEecCCe--EEEEEcCCCC-
Q psy9327 216 PIWKYCK-PVKY-CN---PKHTLHICNRKM-E--PLCNI-HEN--TRVKSGAWDESGVFIYTTSNHI--KYAIVNGDHG- 281 (641)
Q Consensus 216 ~v~~~~~-~l~s-~~---~d~~I~i~d~~~-~--~~~~~-~~~--~~I~sla~~p~g~~L~t~s~~~--k~~l~~~~~g- 281 (641)
.|.... .+.. .. ....|.+||... . .+..+ .+. ..+.+++|++++.++++...++ ++++++..+|
T Consensus 292 -~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 292 -YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGA 370 (710)
T ss_dssp -EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCC
T ss_pred -EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCC
Confidence 111000 0111 11 245688888432 2 22332 332 3678899998888888887665 5666776444
Q ss_pred eEeccccc
Q psy9327 282 IIRTLDLP 289 (641)
Q Consensus 282 ~I~~~d~p 289 (641)
.++.+..+
T Consensus 371 ~~~~l~~~ 378 (710)
T 2xdw_A 371 LLKIFPLE 378 (710)
T ss_dssp EEEEECCC
T ss_pred EEEecCCC
Confidence 35555543
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.4e-09 Score=109.82 Aligned_cols=232 Identities=8% Similarity=0.028 Sum_probs=151.9
Q ss_pred eeeccCCCCeEEEEEccCCC-eEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 3 TKFETKSARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
..+..+.....+..|+|+|+ +++++..++.|..|+. +++ ...+..+...+.+++++++|.++++..
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~----------- 104 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEH----------- 104 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEET-----------
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEEC-----------
Confidence 34555566778999999998 5667777899999997 454 455666778899999999999776664
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccC----CCCeEEEEEccCCCEEEE----EeC------------
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH----LDYIRTTFFHHEYPWILS----ASD------------ 141 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h----~~~V~~v~fsp~~~~l~s----gs~------------ 141 (641)
.++.|.+||.. ++........ ...+.+++++|+|.++++ |..
T Consensus 105 -----------------~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~ 166 (305)
T 3dr2_A 105 -----------------GRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPEL 166 (305)
T ss_dssp -----------------TTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSS
T ss_pred -----------------CCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccccccccc
Confidence 56789999986 5533222111 234678999999998886 332
Q ss_pred -CCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCC------CeEEEEecCCCcee--eeccCC-Cce--ee
Q psy9327 142 -DQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLD------QTIRVWDISGLRKK--NVAPGM-GKL--VL 209 (641)
Q Consensus 142 -Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~D------gtI~IWD~~~~~~~--~~~~~~-~~~--v~ 209 (641)
.+.|..||..+++..... .......++|+|++..|+.+..+ +.|.+||+...... ..+... ... -+
T Consensus 167 ~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi 244 (305)
T 3dr2_A 167 AHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGF 244 (305)
T ss_dssp SCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSE
T ss_pred CCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeE
Confidence 356888887666644333 44567889999999987777665 78999998754310 111000 000 00
Q ss_pred ecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEE
Q psy9327 210 SMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAI 275 (641)
Q Consensus 210 s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l 275 (641)
....... +..+.. +.|.+|+..+..+..+.....+.+++|++++..|+.++.++-+.+
T Consensus 245 ~~d~~G~-------lwv~~~-~gv~~~~~~g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 245 CVDRGGW-------LWSSSG-TGVCVFDSDGQLLGHIPTPGTASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp EECTTSC-------EEECCS-SEEEEECTTSCEEEEEECSSCCCEEEECTTSCEEEEEETTEEEEE
T ss_pred EECCCCC-------EEEecC-CcEEEECCCCCEEEEEECCCceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 1111111 222222 348888877776666665556788888888888887776655444
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.3e-10 Score=131.50 Aligned_cols=270 Identities=8% Similarity=-0.027 Sum_probs=160.9
Q ss_pred EccCCCeEEEEeCCC---cEEEEEC--ccCcccccc------cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 17 FHPKRPWILSSLHNG---VIQLWDY--RMNTLLEKF------DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 17 fspdg~~Lasg~~dg---~I~iWD~--~~~~~l~~~------~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
.+|+|.+++....++ .-.+|-. ..++...-+ ++|...+.+++|||||++|+.+..
T Consensus 75 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~-------------- 140 (695)
T 2bkl_A 75 PSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQK-------------- 140 (695)
T ss_dssp CEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEE--------------
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEEC--------------
Confidence 348899888776544 3445543 334321111 235567999999999999985531
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCe--EEEEEccCCCEEEEEeCCCe-------------EEEEEC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYI--RTTFFHHEYPWILSASDDQT-------------IRIWYW 150 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V--~~v~fsp~~~~l~sgs~Dg~-------------I~vWd~ 150 (641)
..++.+.+|++||+.+++.+. ..+...+ ..++|+||++.|+.++.|.. |++|++
T Consensus 141 ---------~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l 209 (695)
T 2bkl_A 141 ---------PNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTL 209 (695)
T ss_dssp ---------ETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEET
T ss_pred ---------CCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEEC
Confidence 011256799999999998641 1122223 67899999999999998776 999999
Q ss_pred CCCe----eEEEEccCCCCEEEEEEecCCCEEEEEeCCC----eEEEEecCCCceeeeccCCCceeeecccCCCceeeee
Q psy9327 151 QSRN----CICVLTGHNHYVMCAQFHPTDDIVVSASLDQ----TIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCK 222 (641)
Q Consensus 151 ~~~~----~i~~l~~h~~~V~sl~fsp~g~~lvSgs~Dg----tI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~ 222 (641)
.++. ++....+|...+.++.|+|+|++|+.++.++ .|.+||..++..................... +
T Consensus 210 ~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~g~---l-- 284 (695)
T 2bkl_A 210 GTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKDR---F-- 284 (695)
T ss_dssp TSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEEETTE---E--
T ss_pred CCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEecCCc---E--
Confidence 8775 4444445667899999999999888877666 6777776555433333322211111110111 1
Q ss_pred eeeeeC---CCeeEEEecCC-Ccc---eeeecC--CcceEEEEEcCCccEEEEecCCeEEEE--EcCCCCeEeccccc--
Q psy9327 223 PVKYCN---PKHTLHICNRK-MEP---LCNIHE--NTRVKSGAWDESGVFIYTTSNHIKYAI--VNGDHGIIRTLDLP-- 289 (641)
Q Consensus 223 ~l~s~~---~d~~I~i~d~~-~~~---~~~~~~--~~~I~sla~~p~g~~L~t~s~~~k~~l--~~~~~g~I~~~d~p-- 289 (641)
+.... .++.|.+||.. ... ...+.+ ...+.+++|+ ++..+++...++...+ ++.+.+.++.+..|
T Consensus 285 -~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~ 362 (695)
T 2bkl_A 285 -YVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGV 362 (695)
T ss_dssp -EEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSS
T ss_pred -EEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCC
Confidence 11111 36789999843 221 222222 4467888888 5677777776665544 44444455555443
Q ss_pred eEE----EEEcCcEEE-EEe---CCCCeEEEEeCCcc
Q psy9327 290 IYI----TKIKGNQVY-YLD---RECSPHVLRIDPTE 318 (641)
Q Consensus 290 ~~~----~~~~g~~v~-~~~---~dg~i~v~~~~~~~ 318 (641)
.++ +..++..++ ..+ ..+.++.|++.+++
T Consensus 363 ~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 363 GAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp SEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred eEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 111 112344444 222 33566777766544
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.22 E-value=4.3e-09 Score=106.64 Aligned_cols=178 Identities=8% Similarity=-0.025 Sum_probs=134.5
Q ss_pred CCCeEEEEECCCCeeEEEEccCC-CCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC-CCCEEEEEEecCCC
Q psy9327 99 DDYKIKVWNYKQRKCIFTLLGHL-DYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH-NHYVMCAQFHPTDD 176 (641)
Q Consensus 99 ~Dg~I~vWD~~t~~~~~~~~~h~-~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h-~~~V~sl~fsp~g~ 176 (641)
.|+.|.+||.++|+.+.++..+. ..+.+++++|+|++++ +.++.|..||. +++.+..+..+ ...+.++.+.|+|.
T Consensus 13 ~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~ 89 (276)
T 3no2_A 13 GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGN 89 (276)
T ss_dssp TCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSC
T ss_pred CCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCC
Confidence 99999999999999999998876 4788999999999888 45788999998 89888888865 35788999999999
Q ss_pred EEEEEeC-CCeEEEEecCCCceeeeccCCCceeeecccCCCceeee-----eeeeeeCCCeeEEEecCCCcceeeecCCc
Q psy9327 177 IVVSASL-DQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYC-----KPVKYCNPKHTLHICNRKMEPLCNIHENT 250 (641)
Q Consensus 177 ~lvSgs~-DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~-----~~l~s~~~d~~I~i~d~~~~~~~~~~~~~ 250 (641)
.+++.+. ++.+..+|. .++.+..+..... +. ....+...+. .-+.+...++.|..||..++.+..+....
T Consensus 90 ~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~-~~--~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~~ 165 (276)
T 3no2_A 90 ALVAWCGHPSTILEVNM-KGEVLSKTEFETG-IE--RPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKLSG 165 (276)
T ss_dssp EEEEEESTTEEEEEECT-TSCEEEEEEECCS-CS--SGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEEECSS
T ss_pred EEEEecCCCCEEEEEeC-CCCEEEEEeccCC-CC--cccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEEEECCC
Confidence 9999887 788888886 4554433321000 00 0000000000 01455667899999997788888887766
Q ss_pred ceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE
Q psy9327 251 RVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII 283 (641)
Q Consensus 251 ~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I 283 (641)
...++...++|..+++++.++++..++.++|.+
T Consensus 166 ~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 166 TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp CCCEEEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 777888899999999998888999999886654
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.22 E-value=2.5e-09 Score=111.02 Aligned_cols=248 Identities=9% Similarity=-0.029 Sum_probs=161.3
Q ss_pred CCCcEEEEECccCccccccc------ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCe
Q psy9327 29 HNGVIQLWDYRMNTLLEKFD------EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYK 102 (641)
Q Consensus 29 ~dg~I~iWD~~~~~~l~~~~------~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~ 102 (641)
.+++|.+||..+++....+. .......++++.. +...++.. .++.
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~-~~lyv~~~----------------------------~~~~ 65 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD-GIGWIVVN----------------------------NSHV 65 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET-TEEEEEEG----------------------------GGTE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC-CEEEEEEc----------------------------CCCE
Confidence 37899999999988765442 1223467788753 34444444 6899
Q ss_pred EEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCC-----CCEEEEEEecCCCE
Q psy9327 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN-----HYVMCAQFHPTDDI 177 (641)
Q Consensus 103 I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~-----~~V~sl~fsp~g~~ 177 (641)
|.+||..+++.+.++. .......+++++++.++++...++.|.+||..+++....+.... .....+++ .++.+
T Consensus 66 v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~l 143 (328)
T 3dsm_A 66 IFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYV 143 (328)
T ss_dssp EEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEE
T ss_pred EEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEE
Confidence 9999999999988885 45678899999998666666589999999999998877765332 14556777 34444
Q ss_pred EEEEe-CCCeEEEEecCCCceeeeccCCCce-eeecccCCCceeeeeeeeeeCC----------CeeEEEecCC-Cccee
Q psy9327 178 VVSAS-LDQTIRVWDISGLRKKNVAPGMGKL-VLSMKSKHPIWKYCKPVKYCNP----------KHTLHICNRK-MEPLC 244 (641)
Q Consensus 178 lvSgs-~DgtI~IWD~~~~~~~~~~~~~~~~-v~s~~~~~~v~~~~~~l~s~~~----------d~~I~i~d~~-~~~~~ 244 (641)
+++.. .+++|.+||..+++....++....+ -+.+.....+| .++.. .+.|.++|.. .+...
T Consensus 144 yv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~------v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~ 217 (328)
T 3dsm_A 144 YVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMW------TITDGGYEGSPYGYEAPSLYRIDAETFTVEK 217 (328)
T ss_dssp EEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEE------EEBCCBCTTCSSCBCCCEEEEEETTTTEEEE
T ss_pred EEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEE------EEECCCccCCccccCCceEEEEECCCCeEEE
Confidence 44443 4899999999998877665421111 01111111121 11222 2689999944 44443
Q ss_pred eecC--CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEec---c----ccceEEEEE-cCcEEEEEe-----CCCCe
Q psy9327 245 NIHE--NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRT---L----DLPIYITKI-KGNQVYYLD-----RECSP 309 (641)
Q Consensus 245 ~~~~--~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~---~----d~p~~~~~~-~g~~v~~~~-----~dg~i 309 (641)
.+.. +.....++++|++..++.+.. .+.+++.+++.+.. + ..|-.+.-. ++..++..+ .++.+
T Consensus 218 ~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V 295 (328)
T 3dsm_A 218 QFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIV 295 (328)
T ss_dssp EEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEE
T ss_pred EEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEE
Confidence 4433 457889999999999998776 77788877776531 1 223333222 355565554 56777
Q ss_pred EEEEeC
Q psy9327 310 HVLRID 315 (641)
Q Consensus 310 ~v~~~~ 315 (641)
.+|+.+
T Consensus 296 ~v~d~~ 301 (328)
T 3dsm_A 296 YRYSPQ 301 (328)
T ss_dssp EEECTT
T ss_pred EEECCC
Confidence 777766
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.20 E-value=5.9e-09 Score=106.33 Aligned_cols=236 Identities=11% Similarity=0.040 Sum_probs=151.6
Q ss_pred eccCCCCeEEEEEccCCCeEEE-------EeCCCcEEEEECccCcccccccc-----cccCeEEEEEeCC-CCEEEEece
Q psy9327 5 FETKSARVKGLSFHPKRPWILS-------SLHNGVIQLWDYRMNTLLEKFDE-----HEGPVRGICFHNQ-QPIFVSGGK 71 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Las-------g~~dg~I~iWD~~~~~~l~~~~~-----h~~~V~~i~fsp~-~~~l~sgs~ 71 (641)
+...-....+++|+++|.++++ +..++.|..||..+++.. .+.. +...+.+++++++ +.++++..
T Consensus 13 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~- 90 (314)
T 1pjx_A 13 VTEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-VICKPEVNGYGGIPAGCQCDRDANQLFVADM- 90 (314)
T ss_dssp EECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEE-EEECCEETTEECCEEEEEECSSSSEEEEEET-
T ss_pred hhccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEE-EEEecccCCCCCCCceEEEecCCCcEEEEEC-
Confidence 3344456789999999987777 577899999998777643 2322 5578999999999 76555553
Q ss_pred eeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEE-Ecc----CCCCeEEEEEccCCCEEEEEeCC----
Q psy9327 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT-LLG----HLDYIRTTFFHHEYPWILSASDD---- 142 (641)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~-~~~----h~~~V~~v~fsp~~~~l~sgs~D---- 142 (641)
+..|.+||.. ++.... ... +...+.++++++++.++++...+
T Consensus 91 ----------------------------~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~ 141 (314)
T 1pjx_A 91 ----------------------------RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAP 141 (314)
T ss_dssp ----------------------------TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTT
T ss_pred ----------------------------CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCccccc
Confidence 4479999988 765433 221 12358899999999988877665
Q ss_pred -----------CeEEEEECCCCeeEEEEccCCCCEEEEEEe----cCCCEE-EEEeCCCeEEEEecC-CCce-----eee
Q psy9327 143 -----------QTIRIWYWQSRNCICVLTGHNHYVMCAQFH----PTDDIV-VSASLDQTIRVWDIS-GLRK-----KNV 200 (641)
Q Consensus 143 -----------g~I~vWd~~~~~~i~~l~~h~~~V~sl~fs----p~g~~l-vSgs~DgtI~IWD~~-~~~~-----~~~ 200 (641)
+.|..||.. ++... +..+......++|+ |+++.+ ++.+.++.|.+||.. +++. ...
T Consensus 142 ~~~~~~~~~~~~~l~~~~~~-g~~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~ 219 (314)
T 1pjx_A 142 ADYTRSMQEKFGSIYCFTTD-GQMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGH 219 (314)
T ss_dssp SCCCBTTSSSCEEEEEECTT-SCEEE-EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEE
T ss_pred ccccccccCCCCeEEEECCC-CCEEE-eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEE
Confidence 577788765 54433 33344567889999 999655 445568999999986 3331 122
Q ss_pred ccCCC-ceeeec--ccCCCceeeeeeeeeeCCCeeEEEecCC-CcceeeecC-CcceEEEEEcCCccEEEEec-CCeEEE
Q psy9327 201 APGMG-KLVLSM--KSKHPIWKYCKPVKYCNPKHTLHICNRK-MEPLCNIHE-NTRVKSGAWDESGVFIYTTS-NHIKYA 274 (641)
Q Consensus 201 ~~~~~-~~v~s~--~~~~~v~~~~~~l~s~~~d~~I~i~d~~-~~~~~~~~~-~~~I~sla~~p~g~~L~t~s-~~~k~~ 274 (641)
+++.. .....+ .....+| .+...++.|..||.. +.....+.. ...+.+++++++|..|+.++ .++.+.
T Consensus 220 ~~~~~~~~p~~i~~d~~G~l~------v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~ 293 (314)
T 1pjx_A 220 IPGTHEGGADGMDFDEDNNLL------VANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVW 293 (314)
T ss_dssp CCCCSSCEEEEEEEBTTCCEE------EEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CCCCCCCCCCceEECCCCCEE------EEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEE
Confidence 22211 111111 1111121 222356788899855 555444443 36788999999998666554 445555
Q ss_pred EEcCC
Q psy9327 275 IVNGD 279 (641)
Q Consensus 275 l~~~~ 279 (641)
.++.+
T Consensus 294 ~~~~~ 298 (314)
T 1pjx_A 294 KFEWQ 298 (314)
T ss_dssp EEECS
T ss_pred EEeCC
Confidence 55543
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=3.6e-08 Score=99.36 Aligned_cols=230 Identities=8% Similarity=-0.005 Sum_probs=152.7
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc--ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD--EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~--~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
+...+.+++++++|.+.++...++.|..||.. ++. ..+. .....+.++++.|++.+.++..
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~--------------- 117 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEM--------------- 117 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEET---------------
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEec---------------
Confidence 45679999999999987777778899999975 332 2232 2455789999999998888775
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEEE-EccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE-EccCC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT-LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV-LTGHN 163 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~-~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~-l~~h~ 163 (641)
.++.|.+||. +++.... ...+...+.++++++++.++++...++.|..||. +++.... +..+.
T Consensus 118 -------------~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~ 182 (299)
T 2z2n_A 118 -------------NGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPA 182 (299)
T ss_dssp -------------TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTT
T ss_pred -------------CCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCC
Confidence 6889999998 5554332 3335567899999999998888877899999998 6654432 33455
Q ss_pred CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeee-ccCCCceeeeccc--CCCceeeeeeeeeeCCCeeEEEecCCC
Q psy9327 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNV-APGMGKLVLSMKS--KHPIWKYCKPVKYCNPKHTLHICNRKM 240 (641)
Q Consensus 164 ~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~-~~~~~~~v~s~~~--~~~v~~~~~~l~s~~~d~~I~i~d~~~ 240 (641)
..+.+++++++|.+.++...++.|.+||. +++.... .+.....+.++.. ...+| .+...++.|..+|..+
T Consensus 183 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~------v~~~~~~~i~~~d~~g 255 (299)
T 2z2n_A 183 SGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLW------FTEWGANKIGRLTSNN 255 (299)
T ss_dssp CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEE------EEETTTTEEEEEETTT
T ss_pred CcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEE------EeccCCceEEEECCCC
Confidence 67899999999998877777889999999 5543322 2212222222211 11122 2222467788888543
Q ss_pred cceeeec---CCcceEEEEEcCCccEEEEecCCeEEEEEcCC
Q psy9327 241 EPLCNIH---ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 241 ~~~~~~~---~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~ 279 (641)
. +..+. ....+.++++ ++|...++++. +.+..++.+
T Consensus 256 ~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~-~~l~~~~~~ 294 (299)
T 2z2n_A 256 I-IEEYPIQIKSAEPHGICF-DGETIWFAMEC-DKIGKLTLI 294 (299)
T ss_dssp E-EEEEECSSSSCCEEEEEE-CSSCEEEEETT-TEEEEEEEC
T ss_pred c-eEEEeCCCCCCccceEEe-cCCCEEEEecC-CcEEEEEcC
Confidence 2 22221 2356788888 77776555443 344444433
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=9.6e-09 Score=114.75 Aligned_cols=225 Identities=14% Similarity=0.093 Sum_probs=163.6
Q ss_pred cCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEee
Q psy9327 19 PKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLG 98 (641)
Q Consensus 19 pdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s 98 (641)
|.+.++++...+++|.++|..+++.+.++.. ...+.++.|+||++++++++
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~---------------------------- 215 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIG---------------------------- 215 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEE----------------------------
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEc----------------------------
Confidence 4455667777899999999999998888753 33567999999999999987
Q ss_pred CCCeEEEEECC--CCeeEEEEccCCCCeEEEEEc----cCCCEEEEEe-CCCeEEEEECCCCeeEEEEcc----------
Q psy9327 99 DDYKIKVWNYK--QRKCIFTLLGHLDYIRTTFFH----HEYPWILSAS-DDQTIRIWYWQSRNCICVLTG---------- 161 (641)
Q Consensus 99 ~Dg~I~vWD~~--t~~~~~~~~~h~~~V~~v~fs----p~~~~l~sgs-~Dg~I~vWd~~~~~~i~~l~~---------- 161 (641)
.|+.|.+||+. +++.+.++.... ..+.++|+ |+|+++++++ .+++|.++|..+.+.+.++.-
T Consensus 216 ~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~ 294 (567)
T 1qks_A 216 RDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEY 294 (567)
T ss_dssp TTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCE
T ss_pred CCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccc
Confidence 89999999996 888888887544 45789999 6999877665 469999999999988877642
Q ss_pred CCC-CEEEEEEecCCC-EEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC
Q psy9327 162 HNH-YVMCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK 239 (641)
Q Consensus 162 h~~-~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~ 239 (641)
|.. .+..+.+++++. ++++...+|.|.++|....+....
T Consensus 295 ~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v--------------------------------------- 335 (567)
T 1qks_A 295 HPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKT--------------------------------------- 335 (567)
T ss_dssp ESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEE---------------------------------------
T ss_pred cCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcccee---------------------------------------
Confidence 222 677888888765 455566678999999876331110
Q ss_pred CcceeeecCCcceEEEEEcCCccEEEEec-CCeEEEEEcCCCCeEe-cccc----c-----eEEEEEcCcEEEEEe--CC
Q psy9327 240 MEPLCNIHENTRVKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIR-TLDL----P-----IYITKIKGNQVYYLD--RE 306 (641)
Q Consensus 240 ~~~~~~~~~~~~I~sla~~p~g~~L~t~s-~~~k~~l~~~~~g~I~-~~d~----p-----~~~~~~~g~~v~~~~--~d 306 (641)
..+........+.|+|+|+++++++ ...++.+++..++.+. .++. | ....+.++..++..+ .+
T Consensus 336 ----~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~ 411 (567)
T 1qks_A 336 ----TEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGD 411 (567)
T ss_dssp ----EEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSS
T ss_pred ----eeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCC
Confidence 1111234455689999999988766 5678888998887643 3333 2 122344556777654 46
Q ss_pred CCeEEEEeCC
Q psy9327 307 CSPHVLRIDP 316 (641)
Q Consensus 307 g~i~v~~~~~ 316 (641)
+.+.++..++
T Consensus 412 ~~Vsvid~~~ 421 (567)
T 1qks_A 412 DSVALIGTDP 421 (567)
T ss_dssp SEEEEEECCT
T ss_pred CeEEEecCCC
Confidence 7899998886
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.16 E-value=8.1e-09 Score=109.01 Aligned_cols=283 Identities=8% Similarity=-0.006 Sum_probs=177.6
Q ss_pred EEEccCCCeEEEEeC-----CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 15 LSFHPKRPWILSSLH-----NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 15 l~fspdg~~Lasg~~-----dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
....|+++++++... ++.|.+.|..+++.+.++..-..+ . ++++|+++++.++.....-
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r-------------- 101 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSR-------------- 101 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEE--------------
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccc--------------
Confidence 456789998888865 689999999999999888765666 4 9999999988777410000
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCC-------CCeEEEEEccCCCEEEEEeC--CCeEEEEECCCCeeEEEEc
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL-------DYIRTTFFHHEYPWILSASD--DQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~-------~~V~~v~fsp~~~~l~sgs~--Dg~I~vWd~~~~~~i~~l~ 160 (641)
..-+..++.|.+||..+++.+.++.-.. .....++|+|+|++++.+.. ++.|.++|..+++.+.++.
T Consensus 102 ----~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~ 177 (386)
T 3sjl_D 102 ----IARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD 177 (386)
T ss_dssp ----TTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred ----cccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEE
Confidence 0000136789999999999988875321 24567999999998887763 6899999999999988885
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC-CceeeeccCCCceeeecccCCCcee-eeeeeeeeCCCeeEEEecC
Q psy9327 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG-LRKKNVAPGMGKLVLSMKSKHPIWK-YCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~-~~~~~~~~~~~~~v~s~~~~~~v~~-~~~~l~s~~~d~~I~i~d~ 238 (641)
-.. . ...+....+.+++.+.||++.+.++.. ++........-.........++.|. ....+...+.++.+.+.|.
T Consensus 178 v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~ 254 (386)
T 3sjl_D 178 VPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDL 254 (386)
T ss_dssp CCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEEC
T ss_pred CCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEEC
Confidence 321 1 222333446777888899999999876 4432211110000000011122221 1112334455788898985
Q ss_pred CCcc---eeeec--------C---CcceEEEEEcCCccEEEEecC----------CeEEEEEcCCCCe-EeccccceEE-
Q psy9327 239 KMEP---LCNIH--------E---NTRVKSGAWDESGVFIYTTSN----------HIKYAIVNGDHGI-IRTLDLPIYI- 292 (641)
Q Consensus 239 ~~~~---~~~~~--------~---~~~I~sla~~p~g~~L~t~s~----------~~k~~l~~~~~g~-I~~~d~p~~~- 292 (641)
.... ...+. . ......+++++++..++.... ...+++.+..++. ++.+..+-..
T Consensus 255 ~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~ 334 (386)
T 3sjl_D 255 SSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEID 334 (386)
T ss_dssp TTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEEC
T ss_pred CCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcc
Confidence 4332 11111 0 122334777898888887642 3578888887765 4555443211
Q ss_pred ---EEEcCc-EEEEEeC-CCCeEEEEeCCcchh
Q psy9327 293 ---TKIKGN-QVYYLDR-ECSPHVLRIDPTEFK 320 (641)
Q Consensus 293 ---~~~~g~-~v~~~~~-dg~i~v~~~~~~~~~ 320 (641)
...++. .+|+.++ ++.+.+++..+.+..
T Consensus 335 ~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 335 SINVSQDEKPLLYALSTGDKTLYIHDAESGEEL 367 (386)
T ss_dssp EEEECSSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred eEEECCCCCeEEEEEcCCCCeEEEEECCCCcEE
Confidence 223454 6777665 788988887765543
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.14 E-value=5.9e-10 Score=118.10 Aligned_cols=134 Identities=10% Similarity=0.086 Sum_probs=111.7
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeeccc
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRN 86 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~ 86 (641)
.+.+ |+.++| |+++|+++ .+|.|++||+++.........|..++.++.+.+.. ++++.
T Consensus 86 ~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~---------------- 143 (388)
T 1xip_A 86 EIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNT--LVILN---------------- 143 (388)
T ss_dssp ECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSE--EEEEE----------------
T ss_pred eCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCCC--EEEEE----------------
Confidence 3566 999999 99999999 88999999998776555666788888888776543 66665
Q ss_pred CCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee--EEEE-----
Q psy9327 87 EPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC--ICVL----- 159 (641)
Q Consensus 87 ~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~--i~~l----- 159 (641)
.||.+.+||++++.... +...|++++|||+| ++.|..||++++|+.....+ ..++
T Consensus 144 ------------~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~ 205 (388)
T 1xip_A 144 ------------SVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSE 205 (388)
T ss_dssp ------------TTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHH
T ss_pred ------------CCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcc
Confidence 89999999999887643 45689999999999 78899999999999988776 6666
Q ss_pred -c---cCCCCEEEEEEecCCCEEEE
Q psy9327 160 -T---GHNHYVMCAQFHPTDDIVVS 180 (641)
Q Consensus 160 -~---~h~~~V~sl~fsp~g~~lvS 180 (641)
. +|...|.++.|.+++.++++
T Consensus 206 ~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 206 LEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp HHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred cccccCCCeeEEEEEEecCCeEEEE
Confidence 3 47889999999999988876
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.14 E-value=2.6e-09 Score=108.65 Aligned_cols=184 Identities=9% Similarity=-0.065 Sum_probs=122.9
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccc----cccCeEEEEEeCCCCEEEEeceeeEEeee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDE----HEGPVRGICFHNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~----h~~~V~~i~fsp~~~~l~sgs~~~~~~~~ 78 (641)
+.+..+...+.+++++|+|.++++...++.|.+||..+++....... ....+..++++|+|.++++.+..
T Consensus 62 ~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~------ 135 (296)
T 3e5z_A 62 SPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTY------ 135 (296)
T ss_dssp EEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSH------
T ss_pred EEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcc------
Confidence 34556778899999999999887777778999999877764332221 12356789999999988873200
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC-CCee--
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ-SRNC-- 155 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~-~~~~-- 155 (641)
|........ ........+.|..+|.. ++ ...+..+.....+++|+|+++.+++.+.++.|++||+. +++.
T Consensus 136 g~~~~~~~~-----~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~ 208 (296)
T 3e5z_A 136 GIDKPEEGY-----GGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEY 208 (296)
T ss_dssp HHHCGGGSS-----CCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEE
T ss_pred ccccccccc-----cccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcC
Confidence 000000000 00000013456666655 44 34455577788999999999988888888999999987 4544
Q ss_pred -EEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 156 -ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 156 -i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
...+..+...+.+++++++|.+.++. ++.|.+||.. ++....+.
T Consensus 209 ~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~ 253 (296)
T 3e5z_A 209 QGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVL 253 (296)
T ss_dssp EEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEE
T ss_pred CCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEE
Confidence 33344456677889999999876666 8899999987 55554444
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.5e-08 Score=108.71 Aligned_cols=215 Identities=10% Similarity=0.024 Sum_probs=141.2
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
....+++|+|+++++++...++.|+.||..+++..........+ . ++|+|++..+++++
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~-~-ia~~~~g~~l~~~d------------------- 189 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGG-K-PAVTKDKQRVYSIG------------------- 189 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBC-B-CEECTTSSEEEEEB-------------------
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCC-c-eeEecCCCcEEEEe-------------------
Confidence 46889999999998788777899999999877654444332233 3 99999999888886
Q ss_pred ceeeEEEeeCCC--eEEEEECCCCeeEEEE----ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE----E
Q psy9327 90 LFRIKSVLGDDY--KIKVWNYKQRKCIFTL----LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV----L 159 (641)
Q Consensus 90 ~~~~~~~~s~Dg--~I~vWD~~t~~~~~~~----~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~----l 159 (641)
.++ .|.+||...+.....+ ..+...+.+++++|++..|..+..++.|+.||..++..... .
T Consensus 190 ---------~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~ 260 (409)
T 3hrp_A 190 ---------WEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLEL 260 (409)
T ss_dssp ---------SSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCC
T ss_pred ---------cCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccc
Confidence 444 8999998766544444 22456778999999555555577788999999987764322 2
Q ss_pred ccCCCCE-E-EEEEecC-CCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEe
Q psy9327 160 TGHNHYV-M-CAQFHPT-DDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236 (641)
Q Consensus 160 ~~h~~~V-~-sl~fsp~-g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~ 236 (641)
.++...- . .++|+|+ +.++++-+.++.|+.||.... ...+.+... . .+..++
T Consensus 261 ~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~--------~----------~g~~dg----- 315 (409)
T 3hrp_A 261 SGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSAT--------Q----------KTVQDG----- 315 (409)
T ss_dssp CSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTT--------C----------CSCBCE-----
T ss_pred cCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCC--------C----------CCcCCC-----
Confidence 2222222 3 8999995 667777777899999997653 111111100 0 000000
Q ss_pred cCCCcceeeecCCcceEEEEEcCCccEEEEec-CCeEEEEEcCCCCeEec
Q psy9327 237 NRKMEPLCNIHENTRVKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIRT 285 (641)
Q Consensus 237 d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s-~~~k~~l~~~~~g~I~~ 285 (641)
......-.....++++++|.+.++-+ .+.++..++..+|.+..
T Consensus 316 ------~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~ 359 (409)
T 3hrp_A 316 ------LREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVST 359 (409)
T ss_dssp ------EGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEE
T ss_pred ------cccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEE
Confidence 00000113456789999988666666 77888888766676653
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.12 E-value=7.9e-08 Score=101.74 Aligned_cols=275 Identities=11% Similarity=-0.009 Sum_probs=170.1
Q ss_pred EEccCCCeEEEEeC--CC---cEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 16 SFHPKRPWILSSLH--NG---VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 16 ~fspdg~~Lasg~~--dg---~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
...|+++++++... .+ +|.++|..+++.+.++.....+ .++||||++++.++......
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~--------------- 89 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSR--------------- 89 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccc---------------
Confidence 34578887777653 22 8899999999988877655555 99999999999888510000
Q ss_pred eeeEEEeeCCCeEEEEECCCCeeEEEEccC-------CCCeEEEEEccCCCEEEEEeC--CCeEEEEECCCCeeEEE-Ec
Q psy9327 91 FRIKSVLGDDYKIKVWNYKQRKCIFTLLGH-------LDYIRTTFFHHEYPWILSASD--DQTIRIWYWQSRNCICV-LT 160 (641)
Q Consensus 91 ~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h-------~~~V~~v~fsp~~~~l~sgs~--Dg~I~vWd~~~~~~i~~-l~ 160 (641)
..-+..++.|.+||..+.+.+.++.-. ......++|+|+|++++.++. ++.|.++| .+++.+.. +.
T Consensus 90 ---~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~ 165 (373)
T 2mad_H 90 ---IAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS 165 (373)
T ss_pred ---cccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC
Confidence 000003678999999998887776422 133568999999999998874 58899999 99988777 54
Q ss_pred cCCCCEEEEEEecCC-CEEEEEeCCCeEEEEecCCCceeeeccC-----CCceeeecccCCCceeee-eeeeeeCCCeeE
Q psy9327 161 GHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPG-----MGKLVLSMKSKHPIWKYC-KPVKYCNPKHTL 233 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~~~~~~~~~~-----~~~~v~s~~~~~~v~~~~-~~l~s~~~d~~I 233 (641)
- .. ++.+.|++ ..+++.+.||++.+||. +++....... ....+. .++.+... ..+......+.+
T Consensus 166 ~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~----~~~~~~~~~~~~~~~~~~~~v 236 (373)
T 2mad_H 166 S-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLL----TQPAQANKSGRIVWPVYSGKI 236 (373)
T ss_pred C-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCccee----ecceeEecCCEEEEEcCCceE
Confidence 2 22 24556665 46677888999999999 7765532210 000000 01100000 001122234566
Q ss_pred EEecCCCc---ceeeecC-----------CcceEEEEEcCCccEEEEecC----------CeEEEEEcCCCCeE-ecccc
Q psy9327 234 HICNRKME---PLCNIHE-----------NTRVKSGAWDESGVFIYTTSN----------HIKYAIVNGDHGII-RTLDL 288 (641)
Q Consensus 234 ~i~d~~~~---~~~~~~~-----------~~~I~sla~~p~g~~L~t~s~----------~~k~~l~~~~~g~I-~~~d~ 288 (641)
.+.|.... .+..+.. ......++++|++..++.+.. .+.+.+.+..++.+ +.+..
T Consensus 237 ~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~ 316 (373)
T 2mad_H 237 LQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL 316 (373)
T ss_pred EEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC
Confidence 66663221 1111110 122334678999888887653 24688888877654 55544
Q ss_pred c---eE-EEEEcCc-EEEEEe-CCCCeEEEEeCCcchh
Q psy9327 289 P---IY-ITKIKGN-QVYYLD-RECSPHVLRIDPTEFK 320 (641)
Q Consensus 289 p---~~-~~~~~g~-~v~~~~-~dg~i~v~~~~~~~~~ 320 (641)
+ .. .+..+|+ .++... .++.+.+++..+.+..
T Consensus 317 g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 317 GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEE
Confidence 3 12 2445566 777777 5899999988875543
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=3.7e-09 Score=121.42 Aligned_cols=257 Identities=12% Similarity=0.039 Sum_probs=151.8
Q ss_pred cCCCCeEEEEEccCCCeEEEEe-----CCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 7 TKSARVKGLSFHPKRPWILSSL-----HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~-----~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+|...+.+++|||||++||-+. ...+|++||+.+++.+.. ..+.....+++|+ |++.|+.+....
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~-------- 195 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDK-------- 195 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSC--------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecC--------
Confidence 4566789999999999988443 235799999999976432 1111113578999 999888876100
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCe----eEEEEcc-CCCCeEEEEEccCCCEEEEEeC----CCeEEEEECCC
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRK----CIFTLLG-HLDYIRTTFFHHEYPWILSASD----DQTIRIWYWQS 152 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~----~~~~~~~-h~~~V~~v~fsp~~~~l~sgs~----Dg~I~vWd~~~ 152 (641)
+. ............|++|++.++. .+..... |...+..+.|+|++++++..+. +..|++||+.+
T Consensus 196 ------~~-~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~ 268 (693)
T 3iuj_A 196 ------PD-GSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQ 268 (693)
T ss_dssp ------CC--------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTS
T ss_pred ------cc-cccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCC
Confidence 00 0000000123469999998764 3333333 4556788999999998754332 35899999987
Q ss_pred Ce-eEEEEccCCCCEEEEEEecCCCEE-EEEeCC---CeEEEEecCCCce--eeeccCCCceeeecccCCCceeeeeeee
Q psy9327 153 RN-CICVLTGHNHYVMCAQFHPTDDIV-VSASLD---QTIRVWDISGLRK--KNVAPGMGKLVLSMKSKHPIWKYCKPVK 225 (641)
Q Consensus 153 ~~-~i~~l~~h~~~V~sl~fsp~g~~l-vSgs~D---gtI~IWD~~~~~~--~~~~~~~~~~v~s~~~~~~v~~~~~~l~ 225 (641)
+. ....+..+.+..... |+++|..+ ++...| +.|..||+.++.. ...+..+...+.++....... +.
T Consensus 269 ~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~s~~g~~l-----v~ 342 (693)
T 3iuj_A 269 ENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVLTVHSGSGYL-----FA 342 (693)
T ss_dssp TTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEETTEE-----EE
T ss_pred CCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEEEEEEECCEE-----EE
Confidence 63 455666676666665 56666554 444443 6899999987654 122222222221211111100 11
Q ss_pred eeC--CCeeEEEecCCCcceeeec--CCcceEEEEEcCCccEEEEecC----CeEEEEEcCCCCeEecc
Q psy9327 226 YCN--PKHTLHICNRKMEPLCNIH--ENTRVKSGAWDESGVFIYTTSN----HIKYAIVNGDHGIIRTL 286 (641)
Q Consensus 226 s~~--~d~~I~i~d~~~~~~~~~~--~~~~I~sla~~p~g~~L~t~s~----~~k~~l~~~~~g~I~~~ 286 (641)
... ....|.+||..+.....+. ....+..+++++++..++.... -+.++.++.+++..+.+
T Consensus 343 ~~~~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l 411 (693)
T 3iuj_A 343 EYMVDATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLY 411 (693)
T ss_dssp EEEETTEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEE
T ss_pred EEEECCeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEE
Confidence 111 2236888886655544443 3456777788888766554432 36788888777655443
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.09 E-value=2.7e-09 Score=106.50 Aligned_cols=159 Identities=6% Similarity=-0.009 Sum_probs=122.9
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
..+.+++++|+|.++++...++.|.+||..+.............+.+++++|++.++++..
T Consensus 108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~------------------- 168 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDT------------------- 168 (270)
T ss_dssp SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEG-------------------
T ss_pred CCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEEC-------------------
Confidence 5789999999999777777789999998654433222223334678999999998777765
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl 169 (641)
.++.|.+||...+........+...+.++++++++.++++...++.|.+||............+...+.++
T Consensus 169 ---------~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i 239 (270)
T 1rwi_B 169 ---------DNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAV 239 (270)
T ss_dssp ---------GGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEE
T ss_pred ---------CCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeE
Confidence 67899999988776544333444678999999999888888889999999987665443333344678999
Q ss_pred EEecCCCEEEEEeCCCeEEEEecCCCc
Q psy9327 170 QFHPTDDIVVSASLDQTIRVWDISGLR 196 (641)
Q Consensus 170 ~fsp~g~~lvSgs~DgtI~IWD~~~~~ 196 (641)
+++|+|.++++.+.+++|++++....+
T Consensus 240 ~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 240 AVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred EECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 999999999999999999999987644
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.8e-07 Score=94.25 Aligned_cols=228 Identities=9% Similarity=0.003 Sum_probs=147.4
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc--ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD--EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~--~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
+...+.+++++++|.+.++...++.|..||.. ++. ..+. .....+.++++.+++.+.++..
T Consensus 60 ~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~--------------- 122 (300)
T 2qc5_A 60 PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF-TEYPLPQPDSGPYGITEGLNGDIWFTQL--------------- 122 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECSTTCEEEEET---------------
T ss_pred CCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe-EEecCCCCCCCCccceECCCCCEEEEcc---------------
Confidence 34678999999999977777668899999977 544 2232 2346789999999998887775
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEE-EEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE-EEccCC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIF-TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC-VLTGHN 163 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~-~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~-~l~~h~ 163 (641)
.++.|..||.. ++... .+......+.++++.+++.++++...++.|..||. +++... ....+.
T Consensus 123 -------------~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~ 187 (300)
T 2qc5_A 123 -------------NGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNA 187 (300)
T ss_dssp -------------TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTT
T ss_pred -------------CCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCC
Confidence 67899999987 65442 23334567899999999997777777889999998 554433 223455
Q ss_pred CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeee-ccCCCceeeecc--cCCCceeeeeeeeeeCCCeeEEEecCCC
Q psy9327 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNV-APGMGKLVLSMK--SKHPIWKYCKPVKYCNPKHTLHICNRKM 240 (641)
Q Consensus 164 ~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~-~~~~~~~v~s~~--~~~~v~~~~~~l~s~~~d~~I~i~d~~~ 240 (641)
..+.+++++++|.+.++...++.|.+||. +++.... .+.....+.++. ....+| .+...++.|..+|..+
T Consensus 188 ~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~------v~~~~~~~i~~~~~~g 260 (300)
T 2qc5_A 188 AAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIW------FTEWGANQIGRITNDN 260 (300)
T ss_dssp CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEE------EEETTTTEEEEECTTS
T ss_pred CCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEE------EeccCCCeEEEECCCC
Confidence 67899999999988887777889999998 3333222 222122222211 111121 1222356677777543
Q ss_pred cceee-ec-CCcceEEEEEcCCccEEEEecCCeEEEEE
Q psy9327 241 EPLCN-IH-ENTRVKSGAWDESGVFIYTTSNHIKYAIV 276 (641)
Q Consensus 241 ~~~~~-~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~ 276 (641)
..... .. ....+.+++.+++|...+++. . .+..+
T Consensus 261 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~ 296 (300)
T 2qc5_A 261 TIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKL 296 (300)
T ss_dssp CEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEE
T ss_pred cEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEe
Confidence 22111 11 234567778888776444433 3 44433
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.07 E-value=6.3e-09 Score=120.37 Aligned_cols=269 Identities=9% Similarity=-0.015 Sum_probs=152.0
Q ss_pred ccCCCeEEEEeCCCc---EEEEECc-----cCcccccc-------cccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 18 HPKRPWILSSLHNGV---IQLWDYR-----MNTLLEKF-------DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 18 spdg~~Lasg~~dg~---I~iWD~~-----~~~~l~~~-------~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
+|+|++++....++. -.+|-.. .++. ..+ .+|...+.+++|||||++|+.+...
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~---------- 183 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKG-RVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQD---------- 183 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCC-EEEECGGGCC----EEEEEEEECTTSSEEEEEEEE----------
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCC-EEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcC----------
Confidence 489998887665433 5566543 2322 221 2244478899999999999987610
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCe--------------EEEE
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQT--------------IRIW 148 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~--------------I~vW 148 (641)
.++...+|++||+.+++.+... .+...+..++|+|| +.|+.++.|.. |++|
T Consensus 184 -------------~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~ 248 (741)
T 1yr2_A 184 -------------GGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLH 248 (741)
T ss_dssp -------------TTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEE
T ss_pred -------------CCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEE
Confidence 0001146999999999875431 12222357899999 98888876654 9999
Q ss_pred ECCCCe----eEEEEccCCCCEEEEEEecCCCEEEEEeCCC-----eEEEEecCCC--ceeeeccCCCceeeecccCCCc
Q psy9327 149 YWQSRN----CICVLTGHNHYVMCAQFHPTDDIVVSASLDQ-----TIRVWDISGL--RKKNVAPGMGKLVLSMKSKHPI 217 (641)
Q Consensus 149 d~~~~~----~i~~l~~h~~~V~sl~fsp~g~~lvSgs~Dg-----tI~IWD~~~~--~~~~~~~~~~~~v~s~~~~~~v 217 (641)
++.++. .+.....|...+.++.|+|||++|+..+.++ .|++||+.++ +....+.......... +
T Consensus 249 ~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-----~ 323 (741)
T 1yr2_A 249 RLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-----V 323 (741)
T ss_dssp ETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-----E
T ss_pred ECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-----E
Confidence 997765 3333334445689999999999888777544 8999999876 3122222221111110 0
Q ss_pred eeeeeeeeee----CCCeeEEEecCCC--cceee-ecC-CcceEEEEEcCCccEEEEecCCeE--EEEEcCCCCeEeccc
Q psy9327 218 WKYCKPVKYC----NPKHTLHICNRKM--EPLCN-IHE-NTRVKSGAWDESGVFIYTTSNHIK--YAIVNGDHGIIRTLD 287 (641)
Q Consensus 218 ~~~~~~l~s~----~~d~~I~i~d~~~--~~~~~-~~~-~~~I~sla~~p~g~~L~t~s~~~k--~~l~~~~~g~I~~~d 287 (641)
+.....+... .....|.+||... ..+.. +.+ ...+.+++|+ ++..+++...++. +++++.+.+.++.+.
T Consensus 324 ~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~ 402 (741)
T 1yr2_A 324 DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVS 402 (741)
T ss_dssp EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECB
T ss_pred eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeecc
Confidence 1000001111 1245688888433 22222 222 3346677887 5566777766654 445554455566665
Q ss_pred cc--eEE--E--EEcCcEEE-EEe---CCCCeEEEEeCCcc
Q psy9327 288 LP--IYI--T--KIKGNQVY-YLD---RECSPHVLRIDPTE 318 (641)
Q Consensus 288 ~p--~~~--~--~~~g~~v~-~~~---~dg~i~v~~~~~~~ 318 (641)
.| .++ . ..++..++ +.+ ..+.+..|++.+++
T Consensus 403 ~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 403 LPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp CSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred CCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 43 111 1 12344333 332 23556666665543
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.04 E-value=4.8e-08 Score=99.65 Aligned_cols=225 Identities=8% Similarity=0.087 Sum_probs=142.0
Q ss_pred cCCCCeEEEEEccCC-CeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 7 TKSARVKGLSFHPKR-PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 7 ~H~~~V~~l~fspdg-~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
.+..--.+..|+|++ .++++...++.|..||..+++. ..+ .....+.+++++|++.++++.
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~-~~~~~~~~i~~~~dG~l~v~~---------------- 71 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRV-TMDAPVSSVALRQSGGYVATI---------------- 71 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEE-ECSSCEEEEEEBTTSSEEEEE----------------
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEE-eCCCceEEEEECCCCCEEEEE----------------
Confidence 344556788999965 4566666789999999887754 333 345789999999999955543
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc----CCCCeEEEEEccCCCEEEEEeCC---------CeEEEEECCC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG----HLDYIRTTFFHHEYPWILSASDD---------QTIRIWYWQS 152 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~----h~~~V~~v~fsp~~~~l~sgs~D---------g~I~vWd~~~ 152 (641)
++.|.+||.++++....... ....+.+++++|+|.++++...+ ..-.+|.+..
T Consensus 72 --------------~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~ 137 (297)
T 3g4e_A 72 --------------GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFP 137 (297)
T ss_dssp --------------TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECT
T ss_pred --------------CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEEC
Confidence 45799999998875433322 12357889999999977655322 2334554432
Q ss_pred CeeEEEEccCCCCEEEEEEecCCCEE-EEEeCCCeEEEEec--CCCcee-----eeccCCCceee--ecccCCCceeeee
Q psy9327 153 RNCICVLTGHNHYVMCAQFHPTDDIV-VSASLDQTIRVWDI--SGLRKK-----NVAPGMGKLVL--SMKSKHPIWKYCK 222 (641)
Q Consensus 153 ~~~i~~l~~h~~~V~sl~fsp~g~~l-vSgs~DgtI~IWD~--~~~~~~-----~~~~~~~~~v~--s~~~~~~v~~~~~ 222 (641)
......+..+......++|+|+++.+ ++.+.++.|.+||+ .++... ..+........ .+.....+|.
T Consensus 138 ~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwv--- 214 (297)
T 3g4e_A 138 DHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWV--- 214 (297)
T ss_dssp TSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEE---
T ss_pred CCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEE---
Confidence 22223333344567899999999866 55566889999997 344321 11111111111 1112222222
Q ss_pred eeeeeCCCeeEEEecCC-CcceeeecCC-cceEEEEEc-CCccEEEEecC
Q psy9327 223 PVKYCNPKHTLHICNRK-MEPLCNIHEN-TRVKSGAWD-ESGVFIYTTSN 269 (641)
Q Consensus 223 ~l~s~~~d~~I~i~d~~-~~~~~~~~~~-~~I~sla~~-p~g~~L~t~s~ 269 (641)
+....+.|..||.. ++.+..+... ..+++++|. |++..|+.++.
T Consensus 215 ---a~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 215 ---ACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp ---EEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred ---EEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 22345678999964 7776666653 689999998 88888877653
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.03 E-value=1.4e-07 Score=99.83 Aligned_cols=238 Identities=8% Similarity=-0.094 Sum_probs=150.8
Q ss_pred EEEEccCCCeEEEEe----------CCCcEEEEECccCccccccccc-------ccCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 14 GLSFHPKRPWILSSL----------HNGVIQLWDYRMNTLLEKFDEH-------EGPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 14 ~l~fspdg~~Lasg~----------~dg~I~iWD~~~~~~l~~~~~h-------~~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
.++|||||++++++. .++.|.+||..+.+.+..+... ...-..++|+|+|++++++..
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~----- 144 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQF----- 144 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEec-----
Confidence 899999999998885 3678999999888776665321 123458999999999998861
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEE-EccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEECCCCe
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT-LLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRN 154 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~-~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~I~vWd~~~~~ 154 (641)
..++.|.++| .+++.+.+ +... + ++.+.|++ ..+++.+.|+++.+||. +++
T Consensus 145 ---------------------~~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~ 197 (373)
T 2mad_H 145 ---------------------AAGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGG 197 (373)
T ss_pred ---------------------CCCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCc
Confidence 0257899999 99998877 5422 2 24455655 45677788999999999 777
Q ss_pred eEEEEc-----cCCCC-EEEEEEecCCCEEEEEeCCCeEEEEecCCCce--eeeccC------------CCceeeecccC
Q psy9327 155 CICVLT-----GHNHY-VMCAQFHPTDDIVVSASLDQTIRVWDISGLRK--KNVAPG------------MGKLVLSMKSK 214 (641)
Q Consensus 155 ~i~~l~-----~h~~~-V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~--~~~~~~------------~~~~v~s~~~~ 214 (641)
...... ....+ .....+.+++..++..+.++.+.+.|+.+... ...+.- .+...+.+...
T Consensus 198 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d 277 (373)
T 2mad_H 198 AAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKS 277 (373)
T ss_pred EEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCC
Confidence 653321 11122 23345677665555455788999999975432 111110 00000111110
Q ss_pred -CCceeeeeeeee---eCCCeeEEEec-CCCcceeeecCCcceEEEEEcCCcc-EEEEec-CCeEEEEEcCCCCeE
Q psy9327 215 -HPIWKYCKPVKY---CNPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGV-FIYTTS-NHIKYAIVNGDHGII 283 (641)
Q Consensus 215 -~~v~~~~~~l~s---~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~-~L~t~s-~~~k~~l~~~~~g~I 283 (641)
..+|-....... -...+.|.+.| .+.+.+..+..+....+++|+|||+ .++++. .++.+.+++..++.+
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCE
Confidence 001100000000 00235788889 5566667887777889999999999 788776 578888888776553
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=98.98 E-value=2.1e-07 Score=96.39 Aligned_cols=217 Identities=7% Similarity=-0.043 Sum_probs=136.7
Q ss_pred CeEEEEEccCCC-eEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 11 RVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 11 ~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
-..+..|+|++. +++++..++.|..||..+++. ..+. ....+.+++|+|++.++++.
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~v~~i~~~~dg~l~v~~-------------------- 107 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRK-TVHA-LPFMGSALAKISDSKQLIAS-------------------- 107 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEEE-CSSCEEEEEEEETTEEEEEE--------------------
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEE-CCCcceEEEEeCCCeEEEEE--------------------
Confidence 457889999755 556666789999999887653 2332 35689999999999877765
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEcc----CCCCeEEEEEccCCCEEEEEeC------CCeEEEEECCCCeeEEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLG----HLDYIRTTFFHHEYPWILSASD------DQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~----h~~~V~~v~fsp~~~~l~sgs~------Dg~I~vWd~~~~~~i~~l 159 (641)
.+ .|.+||..+++....... ....+.+++++|+|.++++... .+.|..+| +++.. .+
T Consensus 108 ---------~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~ 174 (326)
T 2ghs_A 108 ---------DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KL 174 (326)
T ss_dssp ---------TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EE
T ss_pred ---------CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-Ee
Confidence 33 399999988875433221 1235889999999997766543 24566666 45533 33
Q ss_pred ccCCCCEEEEEEecCCCEEE-EEeCCCeEEEEecC--CC-ce-----eeeccCCCceeee--cccCCCceeeeeeeeeeC
Q psy9327 160 TGHNHYVMCAQFHPTDDIVV-SASLDQTIRVWDIS--GL-RK-----KNVAPGMGKLVLS--MKSKHPIWKYCKPVKYCN 228 (641)
Q Consensus 160 ~~h~~~V~sl~fsp~g~~lv-Sgs~DgtI~IWD~~--~~-~~-----~~~~~~~~~~v~s--~~~~~~v~~~~~~l~s~~ 228 (641)
..+......++|+|+++.++ +.+.++.|.+||+. ++ .. ...+......... ......+|. +..
T Consensus 175 ~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwv------a~~ 248 (326)
T 2ghs_A 175 FADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWN------ARW 248 (326)
T ss_dssp EEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEE------EEE
T ss_pred eCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEE------EEe
Confidence 33445678999999998664 44567899999986 44 21 1111111111111 111111221 122
Q ss_pred CCeeEEEecCCCcceeeecC-CcceEEEEEc-CCccEEEEec
Q psy9327 229 PKHTLHICNRKMEPLCNIHE-NTRVKSGAWD-ESGVFIYTTS 268 (641)
Q Consensus 229 ~d~~I~i~d~~~~~~~~~~~-~~~I~sla~~-p~g~~L~t~s 268 (641)
.++.|..||..+..+..+.. ...+.+++|+ +++..|+.++
T Consensus 249 ~~~~v~~~d~~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 249 GEGAVDRYDTDGNHIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp TTTEEEEECTTCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred CCCEEEEECCCCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 35678888866655555543 3468899998 8877776654
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.4e-07 Score=98.46 Aligned_cols=227 Identities=11% Similarity=0.056 Sum_probs=141.8
Q ss_pred CCeEEEEEccCCCeEEEEe--CCCcEEEEECccCcccccc-------cccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 10 ARVKGLSFHPKRPWILSSL--HNGVIQLWDYRMNTLLEKF-------DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~--~dg~I~iWD~~~~~~l~~~-------~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
..+.+++++|+|+++++.. .++.++||.+.+++. ..| ..|-..+.+++|++++.+.++-.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~---------- 85 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDN---------- 85 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEEC----------
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcC----------
Confidence 6799999999999888864 245466676655543 222 23556899999999987666543
Q ss_pred eeecccCCcceeeEEEeeC----CCeEEEEECCCCeeEEEEccC------CCCeEEEEEccCCC-EEEEEe---CCCeEE
Q psy9327 81 ILESRNEPCLFRIKSVLGD----DYKIKVWNYKQRKCIFTLLGH------LDYIRTTFFHHEYP-WILSAS---DDQTIR 146 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~----Dg~I~vWD~~t~~~~~~~~~h------~~~V~~v~fsp~~~-~l~sgs---~Dg~I~ 146 (641)
+. +..|.+||..+++.+.++... ...+..+++++++. .+++.+ .++.|.
T Consensus 86 -----------------g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~ 148 (343)
T 2qe8_A 86 -----------------GNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALI 148 (343)
T ss_dssp -----------------HHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEE
T ss_pred -----------------CCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEE
Confidence 11 678999999999977776532 24568999998654 445555 688999
Q ss_pred EEECCCCeeEEEEccCC-----------------------------CCEEEEEEecCCCEEEEEeCCC-eEEEEecC---
Q psy9327 147 IWYWQSRNCICVLTGHN-----------------------------HYVMCAQFHPTDDIVVSASLDQ-TIRVWDIS--- 193 (641)
Q Consensus 147 vWd~~~~~~i~~l~~h~-----------------------------~~V~sl~fsp~g~~lvSgs~Dg-tI~IWD~~--- 193 (641)
+||+.+++....+.+|. ..+..++|+|+++.|+.+..++ .+..+|..
T Consensus 149 v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~ 228 (343)
T 2qe8_A 149 RVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLS 228 (343)
T ss_dssp EEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHT
T ss_pred EEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhc
Confidence 99999887766665431 2368899999999888887766 44444432
Q ss_pred CCce-----eeecc--C-CCc-eeeecccCCCceeeeeeeeeeCCCeeEEEecC-CCcceeeecC--CcceEEEEEcCCc
Q psy9327 194 GLRK-----KNVAP--G-MGK-LVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR-KMEPLCNIHE--NTRVKSGAWDESG 261 (641)
Q Consensus 194 ~~~~-----~~~~~--~-~~~-~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~-~~~~~~~~~~--~~~I~sla~~p~g 261 (641)
.+.. ...+. + .+. .-+++.....+ ..+....+.|..||. .+........ .....+++++++|
T Consensus 229 ~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l------~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g 302 (343)
T 2qe8_A 229 NLQLTDAELGSKIERYSEKPICDGISIDKDHNI------YVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDG 302 (343)
T ss_dssp CTTCCHHHHHTTCEEEEECCSCSCEEECTTCCE------EEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTS
T ss_pred CCCCChhhhhcceEecccCCCCceEEECCCCCE------EEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCC
Confidence 1100 00000 0 000 00111111112 223335678899986 5543222222 3457889999888
Q ss_pred cEEEEecCC
Q psy9327 262 VFIYTTSNH 270 (641)
Q Consensus 262 ~~L~t~s~~ 270 (641)
..+++.+..
T Consensus 303 ~l~v~~~~~ 311 (343)
T 2qe8_A 303 YLYFDCNQL 311 (343)
T ss_dssp CEEEEECCG
T ss_pred cEEEEeCcc
Confidence 766665543
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=98.94 E-value=3.1e-08 Score=100.95 Aligned_cols=156 Identities=10% Similarity=0.073 Sum_probs=117.4
Q ss_pred CCeEEEEEccCCCeEEEEeCC---------------CcEEEEECccCcccccccccccCeEEEEEe----CCCCEEEEec
Q psy9327 10 ARVKGLSFHPKRPWILSSLHN---------------GVIQLWDYRMNTLLEKFDEHEGPVRGICFH----NQQPIFVSGG 70 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~d---------------g~I~iWD~~~~~~l~~~~~h~~~V~~i~fs----p~~~~l~sgs 70 (641)
..+.+++++|+|++.++...+ +.|..||.. ++. ..+..+.....+++|+ |++..+..+.
T Consensus 117 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 117 QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM-IQVDTAFQFPNGIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE-EEEEEEESSEEEEEEEECTTSCEEEEEEEE
T ss_pred cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE-EEeccCCCCcceEEEecccCCCCCEEEEEE
Confidence 458899999999877776655 567777654 443 3333445567899999 9997665553
Q ss_pred eeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC-CCe-----eEEEEccCC-CCeEEEEEccCCCEEEEEeCCC
Q psy9327 71 KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK-QRK-----CIFTLLGHL-DYIRTTFFHHEYPWILSASDDQ 143 (641)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~-t~~-----~~~~~~~h~-~~V~~v~fsp~~~~l~sgs~Dg 143 (641)
+.++.|.+||.. +++ ....+.++. ..+..+++++++.++++...++
T Consensus 195 ---------------------------~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~ 247 (314)
T 1pjx_A 195 ---------------------------TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSS 247 (314)
T ss_dssp ---------------------------TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTT
T ss_pred ---------------------------CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCC
Confidence 267899999986 454 233344444 6788999999999888888899
Q ss_pred eEEEEECCCCeeEEEEccCCCCEEEEEEecCCCE-EEEEeCCCeEEEEecCC
Q psy9327 144 TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISG 194 (641)
Q Consensus 144 ~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~-lvSgs~DgtI~IWD~~~ 194 (641)
.|.+||.++++.+..+..+...+.+++|+|++.. +++.+.++.|..||+..
T Consensus 248 ~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 248 HIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 9999999877777777777788999999999994 45555678999999864
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.92 E-value=2.8e-10 Score=120.54 Aligned_cols=204 Identities=12% Similarity=0.117 Sum_probs=110.4
Q ss_pred CCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeC
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGD 99 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 99 (641)
++..+++++.||.|..||..+|+.+.+++. +++.+..+..++..+++++ .
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s----------------------------~ 57 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDP----------------------------N 57 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECT----------------------------T
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeC----------------------------C
Confidence 577899999999999999999999888866 5565555666777777766 8
Q ss_pred CCeEEEEECCCCeeEEEEccCCCC-eEE-EEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCE
Q psy9327 100 DYKIKVWNYKQRKCIFTLLGHLDY-IRT-TFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177 (641)
Q Consensus 100 Dg~I~vWD~~t~~~~~~~~~h~~~-V~~-v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~ 177 (641)
|+.|..||.++|+.+..+..+... +.+ ..+. .+..+++|+.|+.++.||.++++.+..+..+. ...++|++..
T Consensus 58 dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~ 132 (369)
T 2hz6_A 58 DGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSL 132 (369)
T ss_dssp TCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC--------------------------
T ss_pred CCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCE
Confidence 999999999999887776544221 100 0111 34567888889999999999999887776553 2356678889
Q ss_pred EEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeecCCcceEE-E
Q psy9327 178 VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIHENTRVKS-G 255 (641)
Q Consensus 178 lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~s-l 255 (641)
+++++.|+.|+.||.++++.+-...... ..+....... .....+..++.++.+..|| .+++.+.......++.. .
T Consensus 133 v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~-~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~ 209 (369)
T 2hz6_A 133 LYLGRTEYTITMYDTKTRELRWNATYFD--YAASLPEDDV-DYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFY 209 (369)
T ss_dssp EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBCCCCCT-TCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEE
T ss_pred EEEEecCCEEEEEECCCCCEEEeEeccc--ccCccccCCc-cccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEE
Confidence 9999999999999999887654432110 0000000000 0001234456788899999 45665555554444433 3
Q ss_pred EEcCCc
Q psy9327 256 AWDESG 261 (641)
Q Consensus 256 a~~p~g 261 (641)
+++++|
T Consensus 210 ~~~~dg 215 (369)
T 2hz6_A 210 VWQREG 215 (369)
T ss_dssp ECTTSS
T ss_pred EecCCc
Confidence 344444
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.91 E-value=2e-07 Score=99.93 Aligned_cols=273 Identities=11% Similarity=0.035 Sum_probs=167.7
Q ss_pred cCCCeEEEEeC-C----CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceee
Q psy9327 19 PKRPWILSSLH-N----GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRI 93 (641)
Q Consensus 19 pdg~~Lasg~~-d----g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~ 93 (641)
|++++++++.. + +.|.+.|..+++.+.++..-..+ +++++||+++++++.... ..
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~------------------~~ 141 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVF------------------ER 141 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEE------------------EE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccc------------------cc
Confidence 46676665554 2 69999999999999988766667 899999999888875100 00
Q ss_pred EEEeeCCCeEEEEECCCCeeEEEEccC-------CCCeEEEEEccCCCEEEEEeC--CCeEEEEECCCCeeEEEEccCCC
Q psy9327 94 KSVLGDDYKIKVWNYKQRKCIFTLLGH-------LDYIRTTFFHHEYPWILSASD--DQTIRIWYWQSRNCICVLTGHNH 164 (641)
Q Consensus 94 ~~~~s~Dg~I~vWD~~t~~~~~~~~~h-------~~~V~~v~fsp~~~~l~sgs~--Dg~I~vWd~~~~~~i~~l~~h~~ 164 (641)
..-+..++.|.++|..+++.+.++.-. ......++|+|++++++.+.. +++|.+.|..+++.+.++.-..
T Consensus 142 ~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g- 220 (426)
T 3c75_H 142 IARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD- 220 (426)
T ss_dssp TTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS-
T ss_pred cccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC-
Confidence 000013678999999999988877521 133467899999999988874 6899999999999888876321
Q ss_pred CEEEEEEecCC-CEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeee------eeeeeeCCCeeEEEec
Q psy9327 165 YVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYC------KPVKYCNPKHTLHICN 237 (641)
Q Consensus 165 ~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~------~~l~s~~~d~~I~i~d 237 (641)
+....|++ ..+++.+.||++.+.|..+++...... .+.. ....|++... ..+......+.+.+.|
T Consensus 221 ---~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~----~~~~-v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD 292 (426)
T 3c75_H 221 ---CYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNT----EVFH-TEDELLINHPAFSLRSGRLVWPTYTGKIFQAD 292 (426)
T ss_dssp ---EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEEC----CCCS-CTTSCBCSCCEECTTTCEEEEEBTTSEEEEEE
T ss_pred ---ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEee----eeec-cCCCceeeEeeecCCCCEEEEEeCCCcEEEEe
Confidence 12334443 566677778888877775544332110 0000 0000111000 0011222345677777
Q ss_pred CCCcceeeec-----------C---CcceEEEEEcCCccEEEEecC----------CeEEEEEcCCCCe-EeccccceE-
Q psy9327 238 RKMEPLCNIH-----------E---NTRVKSGAWDESGVFIYTTSN----------HIKYAIVNGDHGI-IRTLDLPIY- 291 (641)
Q Consensus 238 ~~~~~~~~~~-----------~---~~~I~sla~~p~g~~L~t~s~----------~~k~~l~~~~~g~-I~~~d~p~~- 291 (641)
.......... . ......++++|++..++.+.. .+.+.+.+..++. +..+..+-.
T Consensus 293 ~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P 372 (426)
T 3c75_H 293 LTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEI 372 (426)
T ss_dssp ECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred ccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCc
Confidence 4322211110 0 011123689999888887642 3578888877654 455544321
Q ss_pred ---EEEEcCc-EEEEEe-CCCCeEEEEeCCcchh
Q psy9327 292 ---ITKIKGN-QVYYLD-RECSPHVLRIDPTEFK 320 (641)
Q Consensus 292 ---~~~~~g~-~v~~~~-~dg~i~v~~~~~~~~~ 320 (641)
.+..+++ .+++.. .++.+.+++..+.+..
T Consensus 373 ~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 373 DSINVSQDAEPLLYALSAGTQTLHIYDAATGEEL 406 (426)
T ss_dssp CEEEECCSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred CeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEE
Confidence 1345677 888888 5899999988875543
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=98.91 E-value=2.1e-07 Score=98.15 Aligned_cols=245 Identities=9% Similarity=0.055 Sum_probs=155.3
Q ss_pred EEEEccCCCeEEEEe----------CCCcEEEEECccCcccccccccc-------cCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 14 GLSFHPKRPWILSSL----------HNGVIQLWDYRMNTLLEKFDEHE-------GPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 14 ~l~fspdg~~Lasg~----------~dg~I~iWD~~~~~~l~~~~~h~-------~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
.++++|||++++++. .++.|.+||..+++.+.++.... ..-..++|+|||+++.++..
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~----- 156 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQF----- 156 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEEC-----
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEc-----
Confidence 499999999887765 36789999999998887774321 23457999999999888751
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCC-Cee
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS-RNC 155 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~-~~~ 155 (641)
..++.|.++|..+++.+.++.-. + . ...+......+++.+.||++.+.+..+ ++.
T Consensus 157 ---------------------~~~~~VsVID~~t~~vv~tI~v~-g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 157 ---------------------SPAPAVGVVDLEGKAFKRMLDVP-D-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp ---------------------SSSCEEEEEETTTTEEEEEEECC-S-E-EEEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred ---------------------CCCCeEEEEECCCCcEEEEEECC-C-c-ceeecCCCceeEEECCCCCEEEEECCCCCeE
Confidence 13689999999999999988532 1 1 223333455777888899999999876 554
Q ss_pred EEEEccCC----CCEE-EEEEe-cCCCEEEEEeCCCeEEEEecCCCce--eeecc---------C---CCceeeeccc-C
Q psy9327 156 ICVLTGHN----HYVM-CAQFH-PTDDIVVSASLDQTIRVWDISGLRK--KNVAP---------G---MGKLVLSMKS-K 214 (641)
Q Consensus 156 i~~l~~h~----~~V~-sl~fs-p~g~~lvSgs~DgtI~IWD~~~~~~--~~~~~---------~---~~~~v~s~~~-~ 214 (641)
..+...+. .++. ...|. ++|++++ .+.+|+|.+.|..+... ...+. + .+.....+.. .
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~ 291 (386)
T 3sjl_D 213 EITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL 291 (386)
T ss_dssp EEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTT
T ss_pred EEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCC
Confidence 33222121 2221 23554 5675555 66689999999976542 21111 0 0101111111 1
Q ss_pred CCceeeeeeeeee---CCCeeEEEec-CCCcceeeecCCcceEEEEEcCCcc-EEEEec-CCeEEEEEcCCCCe-Eeccc
Q psy9327 215 HPIWKYCKPVKYC---NPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGV-FIYTTS-NHIKYAIVNGDHGI-IRTLD 287 (641)
Q Consensus 215 ~~v~~~~~~l~s~---~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~-~L~t~s-~~~k~~l~~~~~g~-I~~~d 287 (641)
+..|-....-.-+ ...+.|.+.| .+.+.+..+.-+.++.+++++++++ .|++++ .++.+.+++..++. ++.++
T Consensus 292 ~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~ 371 (386)
T 3sjl_D 292 DRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN 371 (386)
T ss_dssp TEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred CeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEec
Confidence 1111100000000 1236788888 6677778887778899999999986 777765 47788888876654 45555
Q ss_pred c
Q psy9327 288 L 288 (641)
Q Consensus 288 ~ 288 (641)
.
T Consensus 372 ~ 372 (386)
T 3sjl_D 372 Q 372 (386)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=98.84 E-value=3.3e-07 Score=98.25 Aligned_cols=152 Identities=9% Similarity=0.057 Sum_probs=110.0
Q ss_pred EEEccCCCeEEEEeCCC--cEEEEECccCcccccc----cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 15 LSFHPKRPWILSSLHNG--VIQLWDYRMNTLLEKF----DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 15 l~fspdg~~Lasg~~dg--~I~iWD~~~~~~l~~~----~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
++|+|+++.|+++..++ .|.+||...+.....+ ......+.+++++|++..|..+.
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d------------------ 237 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVD------------------ 237 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEEC------------------
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEE------------------
Confidence 89999999998888766 7888887665443333 22456778999999555555565
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEE----EccCCCCe--EEEEEccC-CCEEEEEeCCCeEEEEECCCCeeEEEEcc
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFT----LLGHLDYI--RTTFFHHE-YPWILSASDDQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~----~~~h~~~V--~~v~fsp~-~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~ 161 (641)
.++.|..||..++..... ..++.+.- ..++|+|+ +.++++...++.|+.|+.... +..+.+
T Consensus 238 ----------~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g 305 (409)
T 3hrp_A 238 ----------SNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCG 305 (409)
T ss_dssp ----------TTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEE
T ss_pred ----------CCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEe
Confidence 688999999987764322 22222222 39999995 666777778899999997654 334433
Q ss_pred CC---------------CCEEEEEEecCCCEEEEEe-CCCeEEEEecCCCc
Q psy9327 162 HN---------------HYVMCAQFHPTDDIVVSAS-LDQTIRVWDISGLR 196 (641)
Q Consensus 162 h~---------------~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~~~ 196 (641)
+. .....++|+|+|.++++-+ .++.|+.||..++.
T Consensus 306 ~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 306 SATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp CTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred CCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE
Confidence 32 4588999999999888887 89999999987655
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.78 E-value=4.4e-07 Score=97.24 Aligned_cols=240 Identities=8% Similarity=-0.021 Sum_probs=155.0
Q ss_pred EEEEccCCCeEEEEe----------CCCcEEEEECccCccccccccc-------ccCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 14 GLSFHPKRPWILSSL----------HNGVIQLWDYRMNTLLEKFDEH-------EGPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 14 ~l~fspdg~~Lasg~----------~dg~I~iWD~~~~~~l~~~~~h-------~~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
.++++|||++++++. .++.|.++|..+++.+.++.-. ......++|+||+++++++..
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~----- 196 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQF----- 196 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEEC-----
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEec-----
Confidence 899999999888775 4678999999999887776421 223467899999999998851
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEECCCCee
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
..++.|.+.|..+++.+.++.-- .. ....|++ +.+++.+.||++.+.+..+++.
T Consensus 197 ---------------------~~~~~VsVID~~t~kvv~~I~v~--g~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v 251 (426)
T 3c75_H 197 ---------------------SPAPAVGVVDLEGKTFDRMLDVP--DC--YHIFPASPTVFYMNCRDGSLARVDFADGET 251 (426)
T ss_dssp ---------------------SSSCEEEEEETTTTEEEEEEECC--SE--EEEEEEETTEEEEEETTSSEEEEECCTTCC
T ss_pred ---------------------CCCCeEEEEECCCCeEEEEEEcC--Cc--eeeccCCCcEEEEEcCCCCEEEEECCCCcE
Confidence 02688999999999998887642 11 2333433 5667777788888888765554
Q ss_pred EEE----EccCCCCE-EEEEEecCCCEEEEEeCCCeEEEEecCCCceee--ecc---C---------CCceeeecccC-C
Q psy9327 156 ICV----LTGHNHYV-MCAQFHPTDDIVVSASLDQTIRVWDISGLRKKN--VAP---G---------MGKLVLSMKSK-H 215 (641)
Q Consensus 156 i~~----l~~h~~~V-~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~--~~~---~---------~~~~v~s~~~~-~ 215 (641)
... +.....++ ..+.|.+++..++..+.++++.+.|..+..... .+. . .+...+.+... +
T Consensus 252 ~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~ 331 (426)
T 3c75_H 252 KVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSD 331 (426)
T ss_dssp EEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGT
T ss_pred EEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCC
Confidence 422 11111111 235678998887777888999999997543211 100 0 00000011100 1
Q ss_pred Cceeeeeeeeee---CCCeeEEEec-CCCcceeeecCCcceEEEEEcCCcc-EEEEec-CCeEEEEEcCCCCeE
Q psy9327 216 PIWKYCKPVKYC---NPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGV-FIYTTS-NHIKYAIVNGDHGII 283 (641)
Q Consensus 216 ~v~~~~~~l~s~---~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~-~L~t~s-~~~k~~l~~~~~g~I 283 (641)
.+|-....-..+ ...+.|.+.| .+.+.+..+.-+.....++|+|+|+ .++++. .++.+.+++..++.+
T Consensus 332 rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kv 405 (426)
T 3c75_H 332 RIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEE 405 (426)
T ss_dssp EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred EEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCE
Confidence 111100000000 0246799999 6677777887777789999999999 888887 588888888776653
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=98.77 E-value=3e-07 Score=93.65 Aligned_cols=147 Identities=8% Similarity=0.068 Sum_probs=108.2
Q ss_pred CCeEEEEEccCCCeEEEEeCC---------CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 10 ARVKGLSFHPKRPWILSSLHN---------GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~d---------g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
..+++++++|+|++.++...+ +.-.||.+.....+..+..+....++++|+|++..+..+.
T Consensus 98 ~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~---------- 167 (297)
T 3g4e_A 98 NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYID---------- 167 (297)
T ss_dssp EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEE----------
T ss_pred CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEec----------
Confidence 458899999999966654332 3345666543323333334455678999999999776654
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEEC--CCCee-----EEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNY--KQRKC-----IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR 153 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~--~t~~~-----~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~ 153 (641)
+.++.|.+||+ .++.. ...+..+.+...++++.++|.+.++...++.|.+||..++
T Consensus 168 -----------------~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG 230 (297)
T 3g4e_A 168 -----------------SLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG 230 (297)
T ss_dssp -----------------GGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC
T ss_pred -----------------CCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc
Confidence 36889999997 45543 2333445567889999999998888888899999999999
Q ss_pred eeEEEEccCCCCEEEEEEe-cCCCEEEEEeC
Q psy9327 154 NCICVLTGHNHYVMCAQFH-PTDDIVVSASL 183 (641)
Q Consensus 154 ~~i~~l~~h~~~V~sl~fs-p~g~~lvSgs~ 183 (641)
+.+..+..+...+++++|. |+++.|+.++.
T Consensus 231 ~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 231 KRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp CEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred eEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 9998888777889999998 88876655554
|
| >3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.70 E-value=2.4e-08 Score=92.59 Aligned_cols=73 Identities=23% Similarity=0.364 Sum_probs=61.7
Q ss_pred chHHHHHHHHhcCCccchhhhhhhcCCcHHHHHHHhhcCCCCCCCccCCCCCCCccccCCccccccCCCcccee
Q psy9327 345 EVGERIKILKSCGQTSLAYLTAATHGLSEEAAELESNLRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPLLT 418 (641)
Q Consensus 345 D~~~r~~~l~~~g~~~la~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (641)
|+++|+++|.++|+++.||++|++||.++.++++.+..+.++++..||.. ..+....||+|+....+|||++.
T Consensus 104 dv~~~i~lL~~~~r~~eA~~~A~t~g~~~~a~~~~~~~~~~~~~~~~p~~-~~~~~~~p~~~~~~~~~nwp~~~ 176 (177)
T 3mkq_B 104 STKERSSIFAEGGSLPLAYAVAKANGDEAAASAFLEQAEVDEQDVTLPDQ-MDASNFVQRPVISKPLEKWPLKE 176 (177)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHTTCCGGGCCCCSC-CCCSCCSCCCCCSSCCSSCCBCC
T ss_pred CHHHHHHHHHHCCChHHHHHHHHHcCcHHHHHHHHHHhCCccccccCCCc-CCcccCCCCCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999988777778876 33333256666656789999964
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.69 E-value=5.5e-06 Score=86.93 Aligned_cols=265 Identities=8% Similarity=-0.034 Sum_probs=162.8
Q ss_pred CCCeEEEEeCCCcEEEEECccCccccccccc---------ccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNTLLEKFDEH---------EGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h---------~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
.+..+++++.+|.|..+|..+|+.+.++... ...+.+.-. .++..+++++
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~~-------------------- 110 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVT-VSGGHVYIGS-------------------- 110 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEE-EETTEEEEEE--------------------
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCce-EeCCEEEEEc--------------------
Confidence 3567888888999999999999887766542 122322211 1334555554
Q ss_pred eeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCE----
Q psy9327 91 FRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYV---- 166 (641)
Q Consensus 91 ~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V---- 166 (641)
.++.|..+|.++|+.+..+............. +..++.++.++.+..+|..+++.+..........
T Consensus 111 --------~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~ 180 (376)
T 3q7m_A 111 --------EKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG 180 (376)
T ss_dssp --------TTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC
T ss_pred --------CCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC
Confidence 78999999999999888776543222122222 4468888899999999999998877765432211
Q ss_pred -EEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCce----eeec--ccCCCceeeeeeeeeeCCCeeEEEecC-
Q psy9327 167 -MCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKL----VLSM--KSKHPIWKYCKPVKYCNPKHTLHICNR- 238 (641)
Q Consensus 167 -~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~----v~s~--~~~~~v~~~~~~l~s~~~d~~I~i~d~- 238 (641)
...... +..++.++.++.+..+|..+++..-........ +..+ ....|+.. ...+..+..++.+..+|.
T Consensus 181 ~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~v~~~~~~g~l~~~d~~ 257 (376)
T 3q7m_A 181 ESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVV-NGVVFALAYNGNLTALDLR 257 (376)
T ss_dssp CCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEE-TTEEEEECTTSCEEEEETT
T ss_pred CCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEE-CCEEEEEecCcEEEEEECC
Confidence 112222 457888888999999999988776444321100 0000 01112111 112444556778888884
Q ss_pred CCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEeccccc------eEEEEEcCcEEEEEeCCCCeEEE
Q psy9327 239 KMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLP------IYITKIKGNQVYYLDRECSPHVL 312 (641)
Q Consensus 239 ~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~p------~~~~~~~g~~v~~~~~dg~i~v~ 312 (641)
+++.+..... ....+...+ +..++.++.++.+..++..+|.+. |..+ .......++.++..+.+|.+.++
T Consensus 258 tG~~~w~~~~-~~~~~~~~~--~~~l~~~~~~g~l~~~d~~tG~~~-w~~~~~~~~~~~~~~~~~~~l~v~~~~g~l~~~ 333 (376)
T 3q7m_A 258 SGQIMWKREL-GSVNDFIVD--GNRIYLVDQNDRVMALTIDGGVTL-WTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWI 333 (376)
T ss_dssp TCCEEEEECC-CCEEEEEEE--TTEEEEEETTCCEEEEETTTCCEE-EEECTTTTSCCCCCEEETTEEEEECTTSEEEEE
T ss_pred CCcEEeeccC-CCCCCceEE--CCEEEEEcCCCeEEEEECCCCcEE-EeecccCCCcccCCEEECCEEEEEeCCCeEEEE
Confidence 4555444433 233444444 456777778888888888887653 2111 11112357889999999999999
Q ss_pred EeCCcchhhh
Q psy9327 313 RIDPTEFKFK 322 (641)
Q Consensus 313 ~~~~~~~~~k 322 (641)
+..+++...+
T Consensus 334 d~~tG~~~~~ 343 (376)
T 3q7m_A 334 NVEDGRFVAQ 343 (376)
T ss_dssp ETTTCCEEEE
T ss_pred ECCCCcEEEE
Confidence 8887766543
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=5e-07 Score=103.59 Aligned_cols=208 Identities=13% Similarity=0.101 Sum_probs=124.8
Q ss_pred cccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEE-EccCCCCeEEEE
Q psy9327 50 HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT-LLGHLDYIRTTF 128 (641)
Q Consensus 50 h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~-~~~h~~~V~~v~ 128 (641)
|...+.+++|||||++++-+.+ ..++....|++||+.+|+.+.. +.+ .....++
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~-----------------------~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~ 181 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLS-----------------------LAGSDWREIHLMDVESKQPLETPLKD--VKFSGIS 181 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEE-----------------------CSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCE
T ss_pred CcEEEEEEEECCCCCEEEEEEe-----------------------cCCCceEEEEEEECCCCCCCccccCC--ceeccEE
Confidence 5567899999999999886531 0001446899999999986543 221 1124678
Q ss_pred EccCCCEEEEEeCCC-------------eEEEEECCCCe----eEEEEcc-CCCCEEEEEEecCCCEEEEEeC----CCe
Q psy9327 129 FHHEYPWILSASDDQ-------------TIRIWYWQSRN----CICVLTG-HNHYVMCAQFHPTDDIVVSASL----DQT 186 (641)
Q Consensus 129 fsp~~~~l~sgs~Dg-------------~I~vWd~~~~~----~i~~l~~-h~~~V~sl~fsp~g~~lvSgs~----Dgt 186 (641)
|+ |++.|+.++.|. .|++|++.+.. ++..... |.....++.|+|||++|+..+. +..
T Consensus 182 Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 260 (693)
T 3iuj_A 182 WL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNR 260 (693)
T ss_dssp EE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCE
T ss_pred Ee-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcE
Confidence 99 999998888774 49999998764 3433344 5566889999999997754332 358
Q ss_pred EEEEecCCCc-eeeeccCCCceeee-cccCCCceeeeeeeeeeC--CCeeEEEecCCC-cc--eee-ecCCcceEEEEEc
Q psy9327 187 IRVWDISGLR-KKNVAPGMGKLVLS-MKSKHPIWKYCKPVKYCN--PKHTLHICNRKM-EP--LCN-IHENTRVKSGAWD 258 (641)
Q Consensus 187 I~IWD~~~~~-~~~~~~~~~~~v~s-~~~~~~v~~~~~~l~s~~--~d~~I~i~d~~~-~~--~~~-~~~~~~I~sla~~ 258 (641)
|++||+.++. ....+......... .......+- +.+.. ....|..+|... .. +.. ..+...+. .|+
T Consensus 261 i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~----~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s 334 (693)
T 3iuj_A 261 LYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLY----LLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVH 334 (693)
T ss_dssp EEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEE----EEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEE
T ss_pred EEEEECCCCCCceEEEeCCCCceEEEEeccCCEEE----EEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEE
Confidence 9999997763 22222222111111 000000000 11111 246788887332 22 222 33333443 788
Q ss_pred CCccEEEEecC-C--eEEEEEcCCCCeEeccccc
Q psy9327 259 ESGVFIYTTSN-H--IKYAIVNGDHGIIRTLDLP 289 (641)
Q Consensus 259 p~g~~L~t~s~-~--~k~~l~~~~~g~I~~~d~p 289 (641)
+++.+|+.... + .++.+++.+.+..+.+..|
T Consensus 335 ~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p 368 (693)
T 3iuj_A 335 SGSGYLFAEYMVDATARVEQFDYEGKRVREVALP 368 (693)
T ss_dssp EETTEEEEEEEETTEEEEEEECTTSCEEEEECCS
T ss_pred EECCEEEEEEEECCeeEEEEEECCCCeeEEeecC
Confidence 88887776653 3 3678888777777666543
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.68 E-value=8e-07 Score=91.01 Aligned_cols=206 Identities=11% Similarity=-0.056 Sum_probs=128.8
Q ss_pred eCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCE
Q psy9327 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177 (641)
Q Consensus 98 s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~ 177 (641)
+.++.+..+|.. ++....+..+...+.++...+++. +..++.++.+..+|.. ++....+......+.++.+.+++.+
T Consensus 114 t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l 190 (330)
T 3hxj_A 114 SMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTI 190 (330)
T ss_dssp CTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCE
T ss_pred ecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEE
Confidence 478899999988 877777766666667777777776 5667788999999998 7777676655666777777777775
Q ss_pred EEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCC-cceEEEE
Q psy9327 178 VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHEN-TRVKSGA 256 (641)
Q Consensus 178 lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~-~~I~sla 256 (641)
.+. + +.+..+| .+++...........+.++.... ...+..+..++.+..+|.++..+..+... ..+.++.
T Consensus 191 ~v~-t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~-----~g~l~v~t~~~gl~~~~~~g~~~~~~~~~~~~~~~~~ 261 (330)
T 3hxj_A 191 YFG-S--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISE-----DGTIYVTSLDGHLYAINPDGTEKWRFKTGKRIESSPV 261 (330)
T ss_dssp EEE-S--SSEEEEC-TTSCEEEEECCSSCCCSCCEECT-----TSCEEEEETTTEEEEECTTSCEEEEEECSSCCCSCCE
T ss_pred EEE-e--CEEEEEC-CCCcEEEEEccCCcceeceEECC-----CCeEEEEcCCCeEEEECCCCCEeEEeeCCCCccccce
Confidence 544 4 7899999 66555444332222222211110 01133344566677778666655555443 2334456
Q ss_pred EcCCccEEEEecCCeEEEEEcCCCCeEeccccc----eEEEEEcCcEEEEEeCCCCeEEEEeCC
Q psy9327 257 WDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLP----IYITKIKGNQVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 257 ~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~p----~~~~~~~g~~v~~~~~dg~i~v~~~~~ 316 (641)
.+++| .|+.++.++.+..++.+...+.....+ .....+.+..++.++.+|.+.+.....
T Consensus 262 ~~~~g-~l~v~t~~ggl~~~d~~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 262 IGNTD-TIYFGSYDGHLYAINPDGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKFYALFNLE 324 (330)
T ss_dssp ECTTS-CEEEECTTCEEEEECTTSCEEEEEECSSCCCSCCEECTTCCEEEECTTSCEEEEEC--
T ss_pred EcCCC-eEEEecCCCCEEEECCCCcEEEEEEcCCccccceEEcCCCEEEEEcCCCeEEEEeccc
Confidence 66665 477777777777777643333333222 112334667788889999888876554
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.66 E-value=1.5e-06 Score=99.48 Aligned_cols=274 Identities=9% Similarity=-0.013 Sum_probs=169.3
Q ss_pred CCeEEEEeCCCcEEEEECccCcccccccccccC----------e-EEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 21 RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGP----------V-RGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 21 g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~----------V-~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
+..+++++.++.|..+|..+|+.+.+++.+... + .+++. .+..+++++
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~------------------- 128 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGV------------------- 128 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEEC-------------------
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEc-------------------
Confidence 556788888999999999999988887543210 0 11222 234556665
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccC--CCCeEEEEEcc---CCCEEEEEe-----CCCeEEEEECCCCeeEEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH--LDYIRTTFFHH---EYPWILSAS-----DDQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h--~~~V~~v~fsp---~~~~l~sgs-----~Dg~I~vWd~~~~~~i~~l 159 (641)
.|+.|..+|.++|+.+..+... ......+..+| ++..++..+ .|+.|+.||.++++.+..+
T Consensus 129 ---------~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 129 ---------LDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp ---------TTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ---------cCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 8999999999999999887642 11111111122 444444332 3789999999999988776
Q ss_pred ccC--C-----------------------------CCEEEEEEecCCCEEEEEeCCCe-------------------EEE
Q psy9327 160 TGH--N-----------------------------HYVMCAQFHPTDDIVVSASLDQT-------------------IRV 189 (641)
Q Consensus 160 ~~h--~-----------------------------~~V~sl~fsp~g~~lvSgs~Dgt-------------------I~I 189 (641)
... . ..-..+++.|++.+++.++.++. |..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 421 0 01125788999999999988864 999
Q ss_pred EecCCCceeeeccCCCceeeecccCC-Cce-eee------eeeeeeCCCeeEEEec-CCCcceeeecCC-----------
Q psy9327 190 WDISGLRKKNVAPGMGKLVLSMKSKH-PIW-KYC------KPVKYCNPKHTLHICN-RKMEPLCNIHEN----------- 249 (641)
Q Consensus 190 WD~~~~~~~~~~~~~~~~v~s~~~~~-~v~-~~~------~~l~s~~~d~~I~i~d-~~~~~~~~~~~~----------- 249 (641)
||..+++.+=.+....+......... ++. ++. ..+..+..++.+.++| .+++.+......
T Consensus 280 lD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~ 359 (689)
T 1yiq_A 280 VNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMK 359 (689)
T ss_dssp EETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETT
T ss_pred EEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCcc
Confidence 99999987654432111111001111 111 000 0255667889999999 445544221110
Q ss_pred -----------------------------cceEEEEEcCCccEEEEecC-------------------------------
Q psy9327 250 -----------------------------TRVKSGAWDESGVFIYTTSN------------------------------- 269 (641)
Q Consensus 250 -----------------------------~~I~sla~~p~g~~L~t~s~------------------------------- 269 (641)
..-..+++||+...++..++
T Consensus 360 ~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 439 (689)
T 1yiq_A 360 TGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMM 439 (689)
T ss_dssp TTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCC
T ss_pred CCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccccc
Confidence 01123688998777776533
Q ss_pred --------------CeEEEEEcCCCCeEecccc----ce--EEEEEcCcEEEEEeCCCCeEEEEeCCcchhhhHHH
Q psy9327 270 --------------HIKYAIVNGDHGIIRTLDL----PI--YITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLAL 325 (641)
Q Consensus 270 --------------~~k~~l~~~~~g~I~~~d~----p~--~~~~~~g~~v~~~~~dg~i~v~~~~~~~~~~k~~l 325 (641)
++.+..|+..+|.+. |.. |. ......+..++.++.||.+++|+..+++..++..+
T Consensus 440 p~~~~~~~~~~~~~~g~l~A~D~~tG~~~-W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~ 514 (689)
T 1yiq_A 440 PEGAEGLLEMAKSWSGKLIAWDPVKQQAA-WEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPA 514 (689)
T ss_dssp CSSHHHHHHHHTTCEEEEEEEETTTTEEE-EEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CcccccCCCCCCCcceeEEEEECCCCCeE-eEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeC
Confidence 266777777776643 211 11 12445788999999999999999999988766544
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.62 E-value=2.3e-06 Score=97.69 Aligned_cols=273 Identities=8% Similarity=-0.040 Sum_probs=172.3
Q ss_pred CCeEEEEeCCCcEEEEECccCccccccccccc-----------CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 21 RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEG-----------PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 21 g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~-----------~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
+..+++++.++.|..+|..+|+.+.+++.... ...+++. .+..+++++
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~------------------- 135 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGA------------------- 135 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEEC-------------------
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEc-------------------
Confidence 44677778889999999999998887754321 0112232 344556655
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccC-C----CCeEEEEEccCCCEEEEEeC------CCeEEEEECCCCeeEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH-L----DYIRTTFFHHEYPWILSASD------DQTIRIWYWQSRNCICV 158 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h-~----~~V~~v~fsp~~~~l~sgs~------Dg~I~vWd~~~~~~i~~ 158 (641)
.|+.+..+|..+|+.+.++..+ . ..+.+.-...++ .++.++. ++.|+.+|..+++.+..
T Consensus 136 ---------~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~-~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 136 ---------WDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKG-KVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp ---------TTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ---------CCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECC-EEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 8999999999999999988755 2 112111111134 4444443 79999999999998877
Q ss_pred EccCCCC--------------------------------EEEEEEecCCCEEEEEeCCC-------------------eE
Q psy9327 159 LTGHNHY--------------------------------VMCAQFHPTDDIVVSASLDQ-------------------TI 187 (641)
Q Consensus 159 l~~h~~~--------------------------------V~sl~fsp~g~~lvSgs~Dg-------------------tI 187 (641)
+...... ...++++|++..++.++.++ +|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv 285 (677)
T 1kb0_A 206 WFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASI 285 (677)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred eccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEE
Confidence 7532211 13578899999999888764 59
Q ss_pred EEEecCCCceeeeccC--CCceeeecccCCCceeee-------eeeeeeCCCeeEEEec-CCCcceeeecCC--------
Q psy9327 188 RVWDISGLRKKNVAPG--MGKLVLSMKSKHPIWKYC-------KPVKYCNPKHTLHICN-RKMEPLCNIHEN-------- 249 (641)
Q Consensus 188 ~IWD~~~~~~~~~~~~--~~~~v~s~~~~~~v~~~~-------~~l~s~~~d~~I~i~d-~~~~~~~~~~~~-------- 249 (641)
..+|..+++.+=.+.. +...-+. ....|+..-. ..+..+..++.+.++| .+++.+..+...
T Consensus 286 ~AlD~~TG~~~W~~~~~~~d~wd~~-~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~ 364 (677)
T 1kb0_A 286 VALDPDTGKYKWHYQETPGDNWDYT-STQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGY 364 (677)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCC-CCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEEECCCCCEEEEEecCCCcccccc-cCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccccc
Confidence 9999999887654432 1111000 0112221110 2255667889999999 455555443311
Q ss_pred ----cce------------------------EEEEEcCCccEEEEecCC-------------------------------
Q psy9327 250 ----TRV------------------------KSGAWDESGVFIYTTSNH------------------------------- 270 (641)
Q Consensus 250 ----~~I------------------------~sla~~p~g~~L~t~s~~------------------------------- 270 (641)
.++ ..+++||++..++...++
T Consensus 365 d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 444 (677)
T 1kb0_A 365 DKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAK 444 (677)
T ss_dssp CTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCE
T ss_pred CCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccc
Confidence 111 156889988788775432
Q ss_pred ------------eEEEEEcCCCCeEeccccc----e--EEEEEcCcEEEEEeCCCCeEEEEeCCcchhhhHHHh
Q psy9327 271 ------------IKYAIVNGDHGIIRTLDLP----I--YITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALI 326 (641)
Q Consensus 271 ------------~k~~l~~~~~g~I~~~d~p----~--~~~~~~g~~v~~~~~dg~i~v~~~~~~~~~~k~~l~ 326 (641)
+.+..|+..+|.+. |..+ . ......+..++..+.||.+++|+..+++..++..+.
T Consensus 445 ~~~~~~~~~~~~g~l~A~D~~tG~~~-W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 517 (677)
T 1kb0_A 445 FFNAEPPKSKPFGRLLAWDPVAQKAA-WSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTG 517 (677)
T ss_dssp EECSSCCCSCCEEEEEEEETTTTEEE-EEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ccccccCCCCCccEEEEEeCCCCcEE-eecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCC
Confidence 66777777777653 2221 1 123456788999999999999999988877665443
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.62 E-value=4.1e-07 Score=94.82 Aligned_cols=163 Identities=10% Similarity=-0.017 Sum_probs=114.0
Q ss_pred cCCCCeEEEEEccCCCeEEEEeC-----CCcEEEEECccCcccccccc------cccCeEEEEEeCCCCEEEEeceeeEE
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLH-----NGVIQLWDYRMNTLLEKFDE------HEGPVRGICFHNQQPIFVSGGKMIVM 75 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~-----dg~I~iWD~~~~~~l~~~~~------h~~~V~~i~fsp~~~~l~sgs~~~~~ 75 (641)
+|-..+.+++|+++|+++++... ++.|.+||..+++.+..+.. +...+..+++++++..+..+.
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd----- 138 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISD----- 138 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEE-----
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEc-----
Confidence 45678999999999886665543 57899999998887666542 234568999998655554443
Q ss_pred eeeceeeecccCCcceeeEEEee---CCCeEEEEECCCCeeEEEEccCC-----------------------------CC
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLG---DDYKIKVWNYKQRKCIFTLLGHL-----------------------------DY 123 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s---~Dg~I~vWD~~t~~~~~~~~~h~-----------------------------~~ 123 (641)
+ .++.|.+||..+++....+.+|. ..
T Consensus 139 ----------------------~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~ 196 (343)
T 2qe8_A 139 ----------------------PAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLG 196 (343)
T ss_dssp ----------------------CCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCC
T ss_pred ----------------------CccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecc
Confidence 2 46789999998887766554431 23
Q ss_pred eEEEEEccCCCEEEEEeCCC-eEEEEECC---CCe-----eE--EEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEec
Q psy9327 124 IRTTFFHHEYPWILSASDDQ-TIRIWYWQ---SRN-----CI--CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192 (641)
Q Consensus 124 V~~v~fsp~~~~l~sgs~Dg-~I~vWd~~---~~~-----~i--~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~ 192 (641)
+.+++|+|++..++.+..++ .+..++.. .+. .. ....++......++++++|.++++...++.|.+||.
T Consensus 197 ~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 197 VNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp EEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred cceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 68899999999888777665 55444431 110 00 011234445667899999999999999999999998
Q ss_pred CCCc
Q psy9327 193 SGLR 196 (641)
Q Consensus 193 ~~~~ 196 (641)
.+++
T Consensus 277 ~~G~ 280 (343)
T 2qe8_A 277 ADRA 280 (343)
T ss_dssp TTTE
T ss_pred CCCC
Confidence 5444
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=98.61 E-value=2.9e-06 Score=87.65 Aligned_cols=145 Identities=11% Similarity=0.085 Sum_probs=103.1
Q ss_pred CCeEEEEEccCCCeEEEEeCC----CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHN----GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~d----g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
..+.+++++|+|+++++...+ +...||.+.+++. ..+..+.....+++|+|+++.++.+.
T Consensus 134 ~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~-~~~~~~~~~~~~i~~s~dg~~lyv~~--------------- 197 (326)
T 2ghs_A 134 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKV-TKLFADISIPNSICFSPDGTTGYFVD--------------- 197 (326)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEE-EEEEEEESSEEEEEECTTSCEEEEEE---------------
T ss_pred CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcE-EEeeCCCcccCCeEEcCCCCEEEEEE---------------
Confidence 468999999999976655422 2334444434433 33334445678999999998776654
Q ss_pred cCCcceeeEEEeeCCCeEEEEECC--CC-e-----eEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYK--QR-K-----CIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~--t~-~-----~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~ 157 (641)
+.++.|.+||+. ++ + ....+....+...++++.++|.++++...++.|.+||. +++.+.
T Consensus 198 ------------~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~ 264 (326)
T 2ghs_A 198 ------------TKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIA 264 (326)
T ss_dssp ------------TTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEE
T ss_pred ------------CCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEE
Confidence 267899999986 56 3 23334444566789999999998888777889999998 567777
Q ss_pred EEccCCCCEEEEEEe-cCCCEEEEEeC
Q psy9327 158 VLTGHNHYVMCAQFH-PTDDIVVSASL 183 (641)
Q Consensus 158 ~l~~h~~~V~sl~fs-p~g~~lvSgs~ 183 (641)
.+..+...+++++|+ |++..|+.++.
T Consensus 265 ~i~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 265 RYEVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred EEECCCCCcEEEEEecCCCCEEEEEec
Confidence 777777789999998 88876655443
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.60 E-value=1.1e-05 Score=84.73 Aligned_cols=252 Identities=5% Similarity=-0.029 Sum_probs=153.2
Q ss_pred CCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeC
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGD 99 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 99 (641)
++..++.++.+|.|..+|..+|+.+.++............. +..+++++ .
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~----------------------------~ 151 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHT----------------------------S 151 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEEC----------------------------T
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEc----------------------------C
Confidence 45678888899999999999998877665432221111222 33555555 7
Q ss_pred CCeEEEEECCCCeeEEEEccCCCCe-----EEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCC-------EE
Q psy9327 100 DYKIKVWNYKQRKCIFTLLGHLDYI-----RTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY-------VM 167 (641)
Q Consensus 100 Dg~I~vWD~~t~~~~~~~~~h~~~V-----~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~-------V~ 167 (641)
++.|..+|..+|+.+..+....... ...... +..++.++.++.+..+|..+++.+......... +.
T Consensus 152 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~ 229 (376)
T 3q7m_A 152 NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLS 229 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------
T ss_pred CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCccccccc
Confidence 9999999999999888776432211 111222 446788888999999999999887666422110 00
Q ss_pred EEEEec--CCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCccee
Q psy9327 168 CAQFHP--TDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLC 244 (641)
Q Consensus 168 sl~fsp--~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~ 244 (641)
.+.-.| .+..++.++.++.+..+|..+++..-...... ..++.. ....+..+..++.+..+| .+++...
T Consensus 230 ~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~--~~~~~~------~~~~l~~~~~~g~l~~~d~~tG~~~w 301 (376)
T 3q7m_A 230 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS--VNDFIV------DGNRIYLVDQNDRVMALTIDGGVTLW 301 (376)
T ss_dssp CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCC--EEEEEE------ETTEEEEEETTCCEEEEETTTCCEEE
T ss_pred ccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCC--CCCceE------ECCEEEEEcCCCeEEEEECCCCcEEE
Confidence 011111 35678888889999999999887664443211 111000 001133444677888888 4455444
Q ss_pred eecC--CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe-cccc---ceE-EEEEcCcEEEEEeCCCCeEEEE
Q psy9327 245 NIHE--NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR-TLDL---PIY-ITKIKGNQVYYLDRECSPHVLR 313 (641)
Q Consensus 245 ~~~~--~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~-~~d~---p~~-~~~~~g~~v~~~~~dg~i~v~~ 313 (641)
.... ...+.+.... +..++.++.++.+..++.++|.+. ..+. ++. .....++.++..+.+|.+.+++
T Consensus 302 ~~~~~~~~~~~~~~~~--~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 302 TQSDLLHRLLTSPVLY--NGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EECTTTTSCCCCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred eecccCCCcccCCEEE--CCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEEeCCCEEEEEe
Confidence 4431 2222223332 457888888999999998888654 1111 111 1123578889999999988875
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.58 E-value=3.3e-06 Score=83.67 Aligned_cols=165 Identities=13% Similarity=0.086 Sum_probs=114.4
Q ss_pred ceeeccCC--CCeEEEEEccCCCeEEEEeCCC--cEEEEECccCcccccccccccCe--EEEEEeCCCCEEEEeceeeEE
Q psy9327 2 LTKFETKS--ARVKGLSFHPKRPWILSSLHNG--VIQLWDYRMNTLLEKFDEHEGPV--RGICFHNQQPIFVSGGKMIVM 75 (641)
Q Consensus 2 l~~~~~H~--~~V~~l~fspdg~~Lasg~~dg--~I~iWD~~~~~~l~~~~~h~~~V--~~i~fsp~~~~l~sgs~~~~~ 75 (641)
+.+| .|. ....+|.|+ ++.+..+.+.+| .|+.+|..+++.+.+.... ... .++++. +..+....
T Consensus 34 v~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~--g~~ly~lt----- 103 (262)
T 3nol_A 34 VHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDW--KDKIVGLT----- 103 (262)
T ss_dssp EEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEE--TTEEEEEE-----
T ss_pred EEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEe--CCEEEEEE-----
Confidence 3455 344 335889999 677777777776 8999999999988877543 233 335544 33444333
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
-.++.+.++|..+.+.+.++.....+ .++ .+++..++.+..++.|.++|..+.+.
T Consensus 104 ----------------------w~~~~v~v~D~~t~~~~~ti~~~~eG-~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v 158 (262)
T 3nol_A 104 ----------------------WKNGLGFVWNIRNLRQVRSFNYDGEG-WGL--THNDQYLIMSDGTPVLRFLDPESLTP 158 (262)
T ss_dssp ----------------------SSSSEEEEEETTTCCEEEEEECSSCC-CCE--EECSSCEEECCSSSEEEEECTTTCSE
T ss_pred ----------------------eeCCEEEEEECccCcEEEEEECCCCc-eEE--ecCCCEEEEECCCCeEEEEcCCCCeE
Confidence 17899999999999999998753322 233 35666666655688999999999887
Q ss_pred EEEEcc----CC-CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 156 ICVLTG----HN-HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 156 i~~l~~----h~-~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
+.++.- .. ..++.+.|. +|...+..-.+..|.+.|..+++....+.
T Consensus 159 ~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id 209 (262)
T 3nol_A 159 VRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIID 209 (262)
T ss_dssp EEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEE
T ss_pred EEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEE
Confidence 777642 11 345567776 67666555578899999999988777665
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.57 E-value=6.7e-05 Score=74.65 Aligned_cols=146 Identities=10% Similarity=0.006 Sum_probs=93.4
Q ss_pred CCeEEEEeCCCcEEEEECccCccc-----ccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEE
Q psy9327 21 RPWILSSLHNGVIQLWDYRMNTLL-----EKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKS 95 (641)
Q Consensus 21 g~~Lasg~~dg~I~iWD~~~~~~l-----~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (641)
|++|+.+.. +.|+.+|+...... ..+......+.+++|++++..+..+.
T Consensus 1 ~~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d------------------------- 54 (267)
T 1npe_A 1 GTHLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTD------------------------- 54 (267)
T ss_dssp CEEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEE-------------------------
T ss_pred CcEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEE-------------------------
Confidence 345555553 47888987654321 11222345678999999776666655
Q ss_pred EeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecC
Q psy9327 96 VLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174 (641)
Q Consensus 96 ~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~ 174 (641)
..++.|.++|...+.....+........++++++++. ++++....+.|.+++...................++++|+
T Consensus 55 --~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~ 132 (267)
T 1npe_A 55 --ISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPV 132 (267)
T ss_dssp --TTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETT
T ss_pred --CCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeC
Confidence 2678999999986654444433335778999999755 5555566789999998754332223322356789999997
Q ss_pred CCEEEEEeC---CCeEEEEecCC
Q psy9327 175 DDIVVSASL---DQTIRVWDISG 194 (641)
Q Consensus 175 g~~lvSgs~---DgtI~IWD~~~ 194 (641)
+..|+.+.. .+.|..+++..
T Consensus 133 ~g~lyv~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 133 RGNLYWTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp TTEEEEEECCSSSCEEEEEETTS
T ss_pred CCEEEEEECCCCCcEEEEEecCC
Confidence 665554443 35777777653
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=7.8e-06 Score=81.70 Aligned_cols=160 Identities=4% Similarity=-0.118 Sum_probs=113.6
Q ss_pred CeEEEEEccCCCeEEEEeC--CCcEEEEECccCcccccccccc-cCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 11 RVKGLSFHPKRPWILSSLH--NGVIQLWDYRMNTLLEKFDEHE-GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~--dg~I~iWD~~~~~~l~~~~~h~-~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
...+++|+|++.+.++.+. ++.|.+.|..+++.+.++.... ....+++++ +..+..+.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t----------------- 82 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVV----------------- 82 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEE-----------------
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEE-----------------
Confidence 4689999998755555543 5799999999999888765322 223456665 34444443
Q ss_pred CcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC-----
Q psy9327 88 PCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH----- 162 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h----- 162 (641)
-.++.+.++|..+++.+.++..-... ...+++++..++.+..+++|.++|..+.+.+..+.--
T Consensus 83 ----------~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p 150 (266)
T 2iwa_A 83 ----------WLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHR 150 (266)
T ss_dssp ----------TTCSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEE
T ss_pred ----------ecCCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcc
Confidence 27899999999999999988633121 2345567776666667899999999998877776421
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
-..+..+.|. ++...+....++.|.+.|..+++....++
T Consensus 151 ~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~ 189 (266)
T 2iwa_A 151 VIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWIL 189 (266)
T ss_dssp CCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEE
T ss_pred cccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEE
Confidence 1246788888 67555555568899999999988776664
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.55 E-value=1.7e-05 Score=84.56 Aligned_cols=154 Identities=13% Similarity=0.110 Sum_probs=106.8
Q ss_pred cCCCeEEE-EeCCCcEEEEECccC----ccccccc------cc-ccCeEEEEEeCCCCEEEEeceeeEEeeeceeeeccc
Q psy9327 19 PKRPWILS-SLHNGVIQLWDYRMN----TLLEKFD------EH-EGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRN 86 (641)
Q Consensus 19 pdg~~Las-g~~dg~I~iWD~~~~----~~l~~~~------~h-~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~ 86 (641)
+++++|+. |..++.|.+.|+.+. +..+.++ .. ...-..+...|+| +++++...
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~-------------- 157 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGN-------------- 157 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEE--------------
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCC--------------
Confidence 78887665 556899999998654 4555552 11 1244667888999 66655400
Q ss_pred CCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC---CeEEEEEccCCCEEEEEe-------------------CCCe
Q psy9327 87 EPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD---YIRTTFFHHEYPWILSAS-------------------DDQT 144 (641)
Q Consensus 87 ~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~---~V~~v~fsp~~~~l~sgs-------------------~Dg~ 144 (641)
..+...+.|.+.|.++++.+.++....+ .-..+.|+|+++.++++. .+.+
T Consensus 158 --------~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~ 229 (462)
T 2ece_A 158 --------EEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNR 229 (462)
T ss_dssp --------TTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCE
T ss_pred --------cCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCE
Confidence 0001237899999999999999873222 234588899999888885 3789
Q ss_pred EEEEECCCCeeEEEEccC-C-CCEEEEEE--ecCCCEEEEEe------CCCeEEEEecCCC
Q psy9327 145 IRIWYWQSRNCICVLTGH-N-HYVMCAQF--HPTDDIVVSAS------LDQTIRVWDISGL 195 (641)
Q Consensus 145 I~vWd~~~~~~i~~l~~h-~-~~V~sl~f--sp~g~~lvSgs------~DgtI~IWD~~~~ 195 (641)
|.+||+.+++.+.++.-- . .....+.| +|+++++..++ .+++|.+|....+
T Consensus 230 V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g 290 (462)
T 2ece_A 230 IHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDG 290 (462)
T ss_dssp EEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETT
T ss_pred EEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCC
Confidence 999999999888887642 1 23455656 99999877766 5678888776543
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.53 E-value=5.1e-05 Score=75.51 Aligned_cols=162 Identities=9% Similarity=-0.029 Sum_probs=105.6
Q ss_pred CCeEEEEEccCCCeEE-EEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 10 ARVKGLSFHPKRPWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 10 ~~V~~l~fspdg~~La-sg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
..+.+++|+|++..|+ +...++.|..+|...+.....+........+++++|++..+..+.
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d------------------ 97 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTD------------------ 97 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEE------------------
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEE------------------
Confidence 3467899999766555 444578999999875543222222234678999999766666554
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeC---CCeEEEEECCCCeeEEEEccCCCC
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD---DQTIRIWYWQSRNCICVLTGHNHY 165 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~---Dg~I~vWd~~~~~~i~~l~~h~~~ 165 (641)
...+.|.++|...................++++|++..+..+.. .+.|..+++...............
T Consensus 98 ---------~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~ 168 (267)
T 1npe_A 98 ---------SQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGL 168 (267)
T ss_dssp ---------TTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSC
T ss_pred ---------CCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCC
Confidence 26789999998754322223323356789999996655544443 468888887643322122233456
Q ss_pred EEEEEEecCCCEE-EEEeCCCeEEEEecCCCcee
Q psy9327 166 VMCAQFHPTDDIV-VSASLDQTIRVWDISGLRKK 198 (641)
Q Consensus 166 V~sl~fsp~g~~l-vSgs~DgtI~IWD~~~~~~~ 198 (641)
...++++|++..| ++-...+.|.++|..+....
T Consensus 169 P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~ 202 (267)
T 1npe_A 169 PNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRR 202 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTEEEEE
T ss_pred CcEEEEcCCCCEEEEEECCCCEEEEEecCCCceE
Confidence 8899999987655 45556789999999865433
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=98.51 E-value=1.6e-06 Score=91.29 Aligned_cols=198 Identities=5% Similarity=-0.170 Sum_probs=123.1
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEe----------CCCcEEEEECccCccccccccc-------ccCeEEEEEeCCCCE
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSL----------HNGVIQLWDYRMNTLLEKFDEH-------EGPVRGICFHNQQPI 65 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~----------~dg~I~iWD~~~~~~l~~~~~h-------~~~V~~i~fsp~~~~ 65 (641)
.++..-..+ .+.|+|||++++++. .++.|.+||..+++.+.++... ......++|+|||++
T Consensus 60 ~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~ 137 (368)
T 1mda_H 60 GHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSAC 137 (368)
T ss_dssp EEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSC
T ss_pred EEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCE
Confidence 344434455 799999999888886 3688999999999998888643 123568999999998
Q ss_pred EEEece---eeEEe--eece----eee-c--ccCCcceeeEEEeeCCCeEEEEECCC-----Ce----------------
Q psy9327 66 FVSGGK---MIVMA--YQGC----ILE-S--RNEPCLFRIKSVLGDDYKIKVWNYKQ-----RK---------------- 112 (641)
Q Consensus 66 l~sgs~---~~~~~--~~~~----~~~-~--~~~~~~~~~~~~~s~Dg~I~vWD~~t-----~~---------------- 112 (641)
++++.. ..... ++-. +.. . ...|......++.+.|+++.+.|+.+ ++
T Consensus 138 lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~ 217 (368)
T 1mda_H 138 LLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA 217 (368)
T ss_dssp EEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE
T ss_pred EEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc
Confidence 887641 11111 1110 000 0 00111111222233344444444433 11
Q ss_pred ---------------------------eEEEEcc-------C---CCCeEEEEEccCCCEEEEEeC---------CCeEE
Q psy9327 113 ---------------------------CIFTLLG-------H---LDYIRTTFFHHEYPWILSASD---------DQTIR 146 (641)
Q Consensus 113 ---------------------------~~~~~~~-------h---~~~V~~v~fsp~~~~l~sgs~---------Dg~I~ 146 (641)
.+..+.- + ......++|+|++..++.+.. +..+.
T Consensus 218 ~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ 297 (368)
T 1mda_H 218 QANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTS 297 (368)
T ss_dssp EETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEE
T ss_pred ccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEE
Confidence 1111110 0 001112689999887776532 23566
Q ss_pred EEECCCCeeEEEEccCCCCEEEEEEecCCC-EEEEEe-CCCeEEEEecCCCceeeeccC
Q psy9327 147 IWYWQSRNCICVLTGHNHYVMCAQFHPTDD-IVVSAS-LDQTIRVWDISGLRKKNVAPG 203 (641)
Q Consensus 147 vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~-~lvSgs-~DgtI~IWD~~~~~~~~~~~~ 203 (641)
++|..+++.+.++.... ....+.|+|+|+ .+++.. .+++|.++|..+++.+.+++.
T Consensus 298 ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~v 355 (368)
T 1mda_H 298 SVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVEL 355 (368)
T ss_dssp EEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCC
T ss_pred EEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEEC
Confidence 99999999888775332 578999999997 566777 599999999999998888763
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.48 E-value=5e-06 Score=85.00 Aligned_cols=167 Identities=11% Similarity=0.019 Sum_probs=105.6
Q ss_pred eeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCC
Q psy9327 97 LGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176 (641)
Q Consensus 97 ~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~ 176 (641)
++.++.|..+|.. ++.+..+......+.++.+.+++.+++. + +.+..+| .+++...........+.++...++|.
T Consensus 153 gt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~-t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~ 227 (330)
T 3hxj_A 153 GSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFG-S--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT 227 (330)
T ss_dssp ECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEE-S--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC
T ss_pred EcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEE-e--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe
Confidence 3478999999998 8877777766667777888778875544 4 8899999 77777777766666788888888775
Q ss_pred EEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecC-CcceEEE
Q psy9327 177 IVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHE-NTRVKSG 255 (641)
Q Consensus 177 ~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~-~~~I~sl 255 (641)
+..++.++.+..+|.. ++............. .++......+..+..++.+..+|.++........ ...+.++
T Consensus 228 -l~v~t~~~gl~~~~~~-g~~~~~~~~~~~~~~-----~~~~~~~g~l~v~t~~ggl~~~d~~g~~~~~~~~~~~~~~~~ 300 (330)
T 3hxj_A 228 -IYVTSLDGHLYAINPD-GTEKWRFKTGKRIES-----SPVIGNTDTIYFGSYDGHLYAINPDGTEKWNFETGSWIIATP 300 (330)
T ss_dssp -EEEEETTTEEEEECTT-SCEEEEEECSSCCCS-----CCEECTTSCEEEECTTCEEEEECTTSCEEEEEECSSCCCSCC
T ss_pred -EEEEcCCCeEEEECCC-CCEeEEeeCCCCccc-----cceEcCCCeEEEecCCCCEEEECCCCcEEEEEEcCCccccce
Confidence 4456677888888853 333333322111111 1111111124455567778888866555544443 4456667
Q ss_pred EEcCCccEEEEecCCeEEEEE
Q psy9327 256 AWDESGVFIYTTSNHIKYAIV 276 (641)
Q Consensus 256 a~~p~g~~L~t~s~~~k~~l~ 276 (641)
..+++|. |+.++.+|.+.+.
T Consensus 301 ~~d~~g~-l~~gt~~G~~~~~ 320 (330)
T 3hxj_A 301 VIDENGT-IYFGTRNGKFYAL 320 (330)
T ss_dssp EECTTCC-EEEECTTSCEEEE
T ss_pred EEcCCCE-EEEEcCCCeEEEE
Confidence 7777765 5556655555544
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.47 E-value=7.4e-06 Score=81.18 Aligned_cols=157 Identities=10% Similarity=-0.002 Sum_probs=112.6
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCe--EEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPV--RGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V--~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
....+|.|+. +.+..+.+.+|.|+.+|..+++.+.+. -.... .++++..+. ..+...
T Consensus 55 ~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~g~~-Ly~ltw----------------- 113 (268)
T 3nok_A 55 AFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLASDGER-LYQLTW----------------- 113 (268)
T ss_dssp CCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEECSSC-EEEEES-----------------
T ss_pred cccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEEeCCE-EEEEEc-----------------
Confidence 3457899984 567778888899999999999988877 22333 346655433 223333
Q ss_pred CcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc--CC--
Q psy9327 88 PCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG--HN-- 163 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~--h~-- 163 (641)
.++.+.+||.++.+.+.++..-..+ .+++ +++..|+.+..++.|.++|..+.+.+.++.- +.
T Consensus 114 -----------~~~~v~V~D~~Tl~~~~ti~~~~eG-wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~ 179 (268)
T 3nok_A 114 -----------TEGLLFTWSGMPPQRERTTRYSGEG-WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQP 179 (268)
T ss_dssp -----------SSCEEEEEETTTTEEEEEEECSSCC-CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEE
T ss_pred -----------cCCEEEEEECCcCcEEEEEeCCCce-eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcc
Confidence 7899999999999999998753222 3444 5677777776799999999999888777642 21
Q ss_pred -CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 164 -HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 164 -~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
..++.+.|. +|...+..-.+..|.+.|..+++....+.
T Consensus 180 v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Id 218 (268)
T 3nok_A 180 VELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVID 218 (268)
T ss_dssp CCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEE
T ss_pred cccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEE
Confidence 245667777 67655555568899999999988776664
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=8.9e-05 Score=76.03 Aligned_cols=153 Identities=11% Similarity=0.147 Sum_probs=103.0
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc--------------------ccccCeEEEEEeC-CCCEEEE
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD--------------------EHEGPVRGICFHN-QQPIFVS 68 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~--------------------~h~~~V~~i~fsp-~~~~l~s 68 (641)
....+++|+++|+++.++..++.|..||..+++. ..+. .....+.++++.+ ++.++++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 4567889999999888888899999999765532 2221 1124678999998 6655444
Q ss_pred eceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc-----CCCCeEEEEEcc-CCCEEEEEeC-
Q psy9327 69 GGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG-----HLDYIRTTFFHH-EYPWILSASD- 141 (641)
Q Consensus 69 gs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~-----h~~~V~~v~fsp-~~~~l~sgs~- 141 (641)
. ..+.|..+|..++.. ..+.. .......+++.+ +|.+.++...
T Consensus 98 d-----------------------------~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~ 147 (322)
T 2fp8_A 98 D-----------------------------CYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVST 147 (322)
T ss_dssp E-----------------------------TTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCS
T ss_pred E-----------------------------CCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcc
Confidence 3 344588888776542 22211 123578899999 9987776532
Q ss_pred ----------------CCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEE-eCCCeEEEEecCC
Q psy9327 142 ----------------DQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSA-SLDQTIRVWDISG 194 (641)
Q Consensus 142 ----------------Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSg-s~DgtI~IWD~~~ 194 (641)
++.|..||..+++...... .......++|+|++..++.+ +.++.|.+||+.+
T Consensus 148 ~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 148 LYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp SCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred cccccccceehcccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 3779999987776432222 22345678999999865554 5678999999875
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.45 E-value=3.3e-08 Score=104.45 Aligned_cols=173 Identities=13% Similarity=0.033 Sum_probs=96.3
Q ss_pred CCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCC-EE-EEEEecCCC
Q psy9327 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY-VM-CAQFHPTDD 176 (641)
Q Consensus 99 ~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~-V~-sl~fsp~g~ 176 (641)
.|+.|..||..+|+.+.++.. +.+.+..+..++..+++++.|+.|+.||.++++.+..+..+... +. +..+. .+.
T Consensus 17 ~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~ 93 (369)
T 2hz6_A 17 LDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDG 93 (369)
T ss_dssp TTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----
T ss_pred CCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCC
Confidence 899999999999999998876 55656666677878888899999999999998876665433211 10 00111 355
Q ss_pred EEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeecCCcceEEE
Q psy9327 177 IVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIHENTRVKSG 255 (641)
Q Consensus 177 ~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sl 255 (641)
.+++++.|+.++.||..+++.+-.+...+... ..| ....+..++.++.+..|| .+++.+..+... ...+.
T Consensus 94 ~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~~~-----~~p---~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~-~~~~~ 164 (369)
T 2hz6_A 94 ILYMGKKQDIWYVIDLLTGEKQQTLSSAFADS-----LSP---STSLLYLGRTEYTITMYDTKTRELRWNATYF-DYAAS 164 (369)
T ss_dssp -CCCCEEEEEEEEECCC------------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE-EECCB
T ss_pred EEEEEeCCCEEEEEECCCCcEEEEecCCCccc-----ccc---cCCEEEEEecCCEEEEEECCCCCEEEeEecc-cccCc
Confidence 78888999999999999988776554332111 111 111245566788999999 455554443321 12223
Q ss_pred EEcCCc---cEEEEecCCeEEEEEcCCCCeE
Q psy9327 256 AWDESG---VFIYTTSNHIKYAIVNGDHGII 283 (641)
Q Consensus 256 a~~p~g---~~L~t~s~~~k~~l~~~~~g~I 283 (641)
++++++ ..++.++.++.+..++..+|.+
T Consensus 165 ~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 165 LPEDDVDYKMSHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp CCCCCTTCCCCEEEEETSCEEEEECTTTCCE
T ss_pred cccCCccccceEEEECCCCEEEEEECCCCcE
Confidence 344432 4577788889999999888765
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.39 E-value=3.5e-05 Score=75.64 Aligned_cols=166 Identities=9% Similarity=0.005 Sum_probs=113.0
Q ss_pred ceeeccCC--CCeEEEEEccCCCeEEEEeCCC--cEEEEECccCcccccccccccC-eEEEEEeCCCCEEEEeceeeEEe
Q psy9327 2 LTKFETKS--ARVKGLSFHPKRPWILSSLHNG--VIQLWDYRMNTLLEKFDEHEGP-VRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 2 l~~~~~H~--~~V~~l~fspdg~~Lasg~~dg--~I~iWD~~~~~~l~~~~~h~~~-V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
+.+| .|. ....+|.|++ +.+..+.+.+| .|+.+|..+++.+.+..-.... -.++++.. ..+....
T Consensus 12 ~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~--~~ly~lt------ 81 (243)
T 3mbr_X 12 VKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR--DRLIQLT------ 81 (243)
T ss_dssp EEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET--TEEEEEE------
T ss_pred EEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC--CEEEEEE------
Confidence 4455 454 4577999997 55666666654 8999999999988877533221 13445543 3333332
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeE
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i 156 (641)
-.++.+.++|.++.+.+.++.....+ .+++ +++..|+.+..+++|.++|..+.+.+
T Consensus 82 ---------------------w~~~~v~v~D~~tl~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~ 137 (243)
T 3mbr_X 82 ---------------------WRNHEGFVYDLATLTPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQV 137 (243)
T ss_dssp ---------------------SSSSEEEEEETTTTEEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEE
T ss_pred ---------------------eeCCEEEEEECCcCcEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEE
Confidence 17899999999999999998753333 3444 45665555556899999999998877
Q ss_pred EEEccCC-----CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 157 CVLTGHN-----HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 157 ~~l~~h~-----~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
.++.-.. ..++.+.|. +|...+..-.+..|.+.|..+++....+.
T Consensus 138 ~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~id 187 (243)
T 3mbr_X 138 GSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWID 187 (243)
T ss_dssp EEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEE
T ss_pred EEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEE
Confidence 7764211 345566665 56655555567899999999988777664
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.38 E-value=7.8e-06 Score=83.35 Aligned_cols=176 Identities=10% Similarity=-0.003 Sum_probs=109.8
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccccc-----ccCeEEEEEeCCCCEEEE----eceeeE
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEH-----EGPVRGICFHNQQPIFVS----GGKMIV 74 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h-----~~~V~~i~fsp~~~~l~s----gs~~~~ 74 (641)
.+..+...+.+++++++|+++++...++.|..||.. ++. ..+..+ ...+..++++|+|.+.++ |...
T Consensus 80 ~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~-~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~-- 155 (305)
T 3dr2_A 80 VLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQA-HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRK-- 155 (305)
T ss_dssp EEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSC--
T ss_pred EEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCE-EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccc--
Confidence 455567789999999999966666566889999975 543 222111 234678999999998886 3200
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC------CeEEEE
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD------QTIRIW 148 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D------g~I~vW 148 (641)
.+.+. ........+.|..||..+++..... .......++|+|++..++.+..+ +.|.+|
T Consensus 156 -~~~~~------------~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~ 220 (305)
T 3dr2_A 156 -PSQGC------------PADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAF 220 (305)
T ss_dssp -GGGSC------------CCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEE
T ss_pred -ccccc------------ccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEE
Confidence 00000 0000001356888888777654433 44567889999999977766554 789999
Q ss_pred ECCCCee--EEEE-ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeec
Q psy9327 149 YWQSRNC--ICVL-TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 149 d~~~~~~--i~~l-~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~ 201 (641)
|+..... ...+ .........+++.++|++.++ +.+ .|.+||.. ++....+
T Consensus 221 ~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~~-g~~~~~~ 273 (305)
T 3dr2_A 221 AWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGT-GVCVFDSD-GQLLGHI 273 (305)
T ss_dssp EEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC-CSS-EEEEECTT-SCEEEEE
T ss_pred EecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe-cCC-cEEEECCC-CCEEEEE
Confidence 9876541 1111 112344567889999995544 444 59999985 4444333
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=98.37 E-value=1.1e-05 Score=84.96 Aligned_cols=101 Identities=5% Similarity=-0.277 Sum_probs=75.9
Q ss_pred cEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC
Q psy9327 32 VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR 111 (641)
Q Consensus 32 ~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~ 111 (641)
+|.+.|..+++.+.++..-..+ ++.|+|+++.+.++..... ...-+..++.|.+||..++
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~------------------r~~~G~~~~~VsviD~~T~ 106 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFA------------------RSAKGKRTDYVEVFDPVTF 106 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEET------------------TTTSSSEEEEEEEECTTTC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEccccc------------------ccccCCCCCEEEEEECCCC
Confidence 8889999999999998766667 7999999998888740000 0000003689999999999
Q ss_pred eeEEEEccC-------CCCeEEEEEccCCCEEEEEeC--CCeEEE--EECCC
Q psy9327 112 KCIFTLLGH-------LDYIRTTFFHHEYPWILSASD--DQTIRI--WYWQS 152 (641)
Q Consensus 112 ~~~~~~~~h-------~~~V~~v~fsp~~~~l~sgs~--Dg~I~v--Wd~~~ 152 (641)
+.+.++..+ ......++|+|+|++++.+.. +..|.+ +|..+
T Consensus 107 ~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 107 LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 999998643 123567999999999888864 467888 99876
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.35 E-value=1.5e-05 Score=91.09 Aligned_cols=242 Identities=10% Similarity=0.053 Sum_probs=148.3
Q ss_pred CCCeEEEEeCCCcEEEEECccCccccccccc--ccCeEEEEEeC---CCCEEEEeceeeEEeeeceeeecccCCcceeeE
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNTLLEKFDEH--EGPVRGICFHN---QQPIFVSGGKMIVMAYQGCILESRNEPCLFRIK 94 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h--~~~V~~i~fsp---~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~ 94 (641)
.+..+++++.||.|..+|..+|+.+.++... ......+..+| ++ .++++... ..
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~---------------~~----- 178 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGG---------------AE----- 178 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBC---------------TT-----
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCC---------------Cc-----
Confidence 3557888999999999999999988776542 11111111112 33 33333200 00
Q ss_pred EEeeCCCeEEEEECCCCeeEEEEccC--C-----------------------------CCeEEEEEccCCCEEEEEeCCC
Q psy9327 95 SVLGDDYKIKVWNYKQRKCIFTLLGH--L-----------------------------DYIRTTFFHHEYPWILSASDDQ 143 (641)
Q Consensus 95 ~~~s~Dg~I~vWD~~t~~~~~~~~~h--~-----------------------------~~V~~v~fsp~~~~l~sgs~Dg 143 (641)
.+.++.|..||.++|+.+..+... . .....++++|+...++.++.++
T Consensus 179 --~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g 256 (689)
T 1yiq_A 179 --FGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNG 256 (689)
T ss_dssp --TCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCE
T ss_pred --cCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCC
Confidence 013789999999999998887521 0 0012578889888899888876
Q ss_pred e-------------------EEEEECCCCeeEEEEcc--CC-------CCEEEEEEecCCC---EEEEEeCCCeEEEEec
Q psy9327 144 T-------------------IRIWYWQSRNCICVLTG--HN-------HYVMCAQFHPTDD---IVVSASLDQTIRVWDI 192 (641)
Q Consensus 144 ~-------------------I~vWd~~~~~~i~~l~~--h~-------~~V~sl~fsp~g~---~lvSgs~DgtI~IWD~ 192 (641)
. |..||.++++.+..+.. |. ..........+|. .++.++.+|.++++|.
T Consensus 257 ~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~ 336 (689)
T 1yiq_A 257 SLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDR 336 (689)
T ss_dssp ESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEET
T ss_pred CccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEEC
Confidence 4 99999999998877753 32 1222233334564 7889999999999999
Q ss_pred CCCceeeeccCC------------Ccee----------------ee-------------cccCCC-ceeeeee-------
Q psy9327 193 SGLRKKNVAPGM------------GKLV----------------LS-------------MKSKHP-IWKYCKP------- 223 (641)
Q Consensus 193 ~~~~~~~~~~~~------------~~~v----------------~s-------------~~~~~~-v~~~~~~------- 223 (641)
.+++.+...+-. +..+ .+ ...... ++.....
T Consensus 337 ~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~ 416 (689)
T 1yiq_A 337 ATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEH 416 (689)
T ss_dssp TTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEEC
T ss_pred CCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeee
Confidence 999876321100 0000 00 000000 0000000
Q ss_pred e-------------eee------------------CCCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCe
Q psy9327 224 V-------------KYC------------------NPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHI 271 (641)
Q Consensus 224 l-------------~s~------------------~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~ 271 (641)
. ..+ ..++.+..|| .+++.+..+....+.....+...+..++.++.++
T Consensus 417 ~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg 496 (689)
T 1yiq_A 417 IPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADG 496 (689)
T ss_dssp CSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTS
T ss_pred ccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCC
Confidence 0 000 0147899999 5566666666655565566666777888999999
Q ss_pred EEEEEcCCCCeEe
Q psy9327 272 KYAIVNGDHGIIR 284 (641)
Q Consensus 272 k~~l~~~~~g~I~ 284 (641)
.+..++.++|.+.
T Consensus 497 ~l~a~D~~tG~~l 509 (689)
T 1yiq_A 497 RVIAYAADTGEKL 509 (689)
T ss_dssp EEEEEETTTCCEE
T ss_pred cEEEEECCCCccc
Confidence 9999998888653
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.34 E-value=1.6e-05 Score=90.83 Aligned_cols=241 Identities=9% Similarity=0.049 Sum_probs=150.9
Q ss_pred CCCeEEEEeCCCcEEEEECccCccccccccc-c----cCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeE
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNTLLEKFDEH-E----GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIK 94 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h-~----~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~ 94 (641)
++..+++++.|+.+..+|..+|+.+.++..+ . ..+.+--.. .+..+++++.. ..
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~---------------~~----- 185 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGG---------------AE----- 185 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBC---------------TT-----
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecc---------------cc-----
Confidence 3567888899999999999999998877654 1 111110000 12334444300 00
Q ss_pred EEeeCCCeEEEEECCCCeeEEEEccCCCC--------------------------------eEEEEEccCCCEEEEEeCC
Q psy9327 95 SVLGDDYKIKVWNYKQRKCIFTLLGHLDY--------------------------------IRTTFFHHEYPWILSASDD 142 (641)
Q Consensus 95 ~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~--------------------------------V~~v~fsp~~~~l~sgs~D 142 (641)
.+.++.|..||..+|+.+.++...... ...++++|++..++.++.+
T Consensus 186 --~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~ 263 (677)
T 1kb0_A 186 --YGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGN 263 (677)
T ss_dssp --TCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCC
T ss_pred --cCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCC
Confidence 002789999999999999887643211 1247889988888888766
Q ss_pred C-------------------eEEEEECCCCeeEEEEcc--CC-------CCEEEEEEecCC---CEEEEEeCCCeEEEEe
Q psy9327 143 Q-------------------TIRIWYWQSRNCICVLTG--HN-------HYVMCAQFHPTD---DIVVSASLDQTIRVWD 191 (641)
Q Consensus 143 g-------------------~I~vWd~~~~~~i~~l~~--h~-------~~V~sl~fsp~g---~~lvSgs~DgtI~IWD 191 (641)
+ +|..+|.++++.+..+.. |. .....+....+| ..++.++.+|.++++|
T Consensus 264 ~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD 343 (677)
T 1kb0_A 264 GSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLD 343 (677)
T ss_dssp EESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEE
T ss_pred CccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEE
Confidence 4 599999999998877653 31 123333444577 6899999999999999
Q ss_pred cCCCceeeeccCC-----------Cceee--------------------------ecccCCC-ceeeeee----ee----
Q psy9327 192 ISGLRKKNVAPGM-----------GKLVL--------------------------SMKSKHP-IWKYCKP----VK---- 225 (641)
Q Consensus 192 ~~~~~~~~~~~~~-----------~~~v~--------------------------s~~~~~~-v~~~~~~----l~---- 225 (641)
..+++.+...+-. +..+. +...... ++..... +.
T Consensus 344 ~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~ 423 (677)
T 1kb0_A 344 RTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKK 423 (677)
T ss_dssp TTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTT
T ss_pred CCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccc
Confidence 9999876543210 11110 0000000 0000000 00
Q ss_pred --ee--------------------------CCCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEE
Q psy9327 226 --YC--------------------------NPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIV 276 (641)
Q Consensus 226 --s~--------------------------~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~ 276 (641)
.+ ...+.|..|| .+++.+..+....++.+..+...+..++.++.++.+.++
T Consensus 424 ~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~ 503 (677)
T 1kb0_A 424 WEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAY 503 (677)
T ss_dssp CCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEE
T ss_pred cccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEE
Confidence 00 0237899999 556666666666666666677777788888999999999
Q ss_pred cCCCCeE
Q psy9327 277 NGDHGII 283 (641)
Q Consensus 277 ~~~~g~I 283 (641)
+..+|.+
T Consensus 504 D~~tG~~ 510 (677)
T 1kb0_A 504 HAATGEK 510 (677)
T ss_dssp ETTTCCE
T ss_pred ECCCCce
Confidence 9887764
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.21 E-value=4.9e-05 Score=80.98 Aligned_cols=174 Identities=18% Similarity=0.199 Sum_probs=114.4
Q ss_pred CeEEEEEccCCCeEEEEeCC------CcEEEEECccCcccccccccccC---eEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 11 RVKGLSFHPKRPWILSSLHN------GVIQLWDYRMNTLLEKFDEHEGP---VRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~d------g~I~iWD~~~~~~l~~~~~h~~~---V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.-..+..+|+| +++++..+ |.|.+.|..+++.+.++..-.++ -..+.|+|+++.++++. |+.....
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~----wg~p~~~ 213 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSE----WAVPNTI 213 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECB----CCCHHHH
T ss_pred cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEcc----CcCcccc
Confidence 34567788999 77777666 78999999999988888633222 34588899999998884 0000000
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccC-C-CCeEEEEE--ccCCCEEEEEe------CCCeEEEEECC
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH-L-DYIRTTFF--HHEYPWILSAS------DDQTIRIWYWQ 151 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h-~-~~V~~v~f--sp~~~~l~sgs------~Dg~I~vWd~~ 151 (641)
..+. .+. ... . ..+.+|.+||+.+++.+.++..- . ...+.+.| +|+++++..++ .+++|.+|.+.
T Consensus 214 ~~g~-~~~--~~~-~-~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d 288 (462)
T 2ece_A 214 EDGL-KLE--HLK-D-RYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYE 288 (462)
T ss_dssp TTCC-CTT--THH-H-HSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEE
T ss_pred cccc-chh--hhh-h-ccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEec
Confidence 0000 000 000 0 14789999999999988888653 1 34556666 99999877666 57799888776
Q ss_pred CCee--EEEE--ccC----------------CCCEEEEEEecCCCEEEEEeC-CCeEEEEecCC
Q psy9327 152 SRNC--ICVL--TGH----------------NHYVMCAQFHPTDDIVVSASL-DQTIRVWDISG 194 (641)
Q Consensus 152 ~~~~--i~~l--~~h----------------~~~V~sl~fsp~g~~lvSgs~-DgtI~IWD~~~ 194 (641)
.++. ...+ ... ......+.+||||++|.++.. .+.|.++|+..
T Consensus 289 ~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 289 DGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp TTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred CCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 5431 1111 110 234678999999998876665 78999999863
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.21 E-value=0.00012 Score=83.27 Aligned_cols=273 Identities=10% Similarity=-0.010 Sum_probs=164.7
Q ss_pred CCeEEEEeCCCcEEEEECccCcccccccccccC----------e-EEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 21 RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGP----------V-RGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 21 g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~----------V-~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
+..+++++.++.|..+|..+|+.+.+++..... + .+++. .+..++.++
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~------------------- 124 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGT------------------- 124 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEEC-------------------
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEc-------------------
Confidence 456778888999999999999988877543211 0 11222 233455554
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC----CeEEEEEccCCCEEEEEeC------CCeEEEEECCCCeeEEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD----YIRTTFFHHEYPWILSASD------DQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~----~V~~v~fsp~~~~l~sgs~------Dg~I~vWd~~~~~~i~~l 159 (641)
.|+.|..+|.++|+.+.++..... .+.+.-.-.++ .++.++. ++.|..+|.++++.+..+
T Consensus 125 ---------~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 125 ---------LDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp ---------TTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ---------CCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 799999999999999988764211 11110000134 4444433 589999999999988777
Q ss_pred ccC---CC----------------------------CEEEEEEecCCCEEEEEeCCCe-------------------EEE
Q psy9327 160 TGH---NH----------------------------YVMCAQFHPTDDIVVSASLDQT-------------------IRV 189 (641)
Q Consensus 160 ~~h---~~----------------------------~V~sl~fsp~g~~lvSgs~Dgt-------------------I~I 189 (641)
... .. ....+++.|+...++.++.++. |..
T Consensus 195 ~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~A 274 (668)
T 1kv9_A 195 YTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILA 274 (668)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred cccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 521 00 1124688888889988887764 999
Q ss_pred EecCCCceeeeccCCCceeeecccCCC-ce-ee--e----eeeeeeCCCeeEEEec-CCCcceeeecC------------
Q psy9327 190 WDISGLRKKNVAPGMGKLVLSMKSKHP-IW-KY--C----KPVKYCNPKHTLHICN-RKMEPLCNIHE------------ 248 (641)
Q Consensus 190 WD~~~~~~~~~~~~~~~~v~s~~~~~~-v~-~~--~----~~l~s~~~d~~I~i~d-~~~~~~~~~~~------------ 248 (641)
+|..+++.+=......+.........| +. .+ . ..+..+..++.+.++| .+++.+.....
T Consensus 275 lD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~ 354 (668)
T 1kv9_A 275 IRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLA 354 (668)
T ss_dssp ECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTT
T ss_pred EcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccc
Confidence 999998876544321111100011111 10 00 0 0155666888899998 44554422111
Q ss_pred -Ccce------------------------EEEEEcCCccEEEEec-----------------------------------
Q psy9327 249 -NTRV------------------------KSGAWDESGVFIYTTS----------------------------------- 268 (641)
Q Consensus 249 -~~~I------------------------~sla~~p~g~~L~t~s----------------------------------- 268 (641)
..++ ..+++||+...++...
T Consensus 355 ~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~ 434 (668)
T 1kv9_A 355 TGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAA 434 (668)
T ss_dssp TCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGG
T ss_pred cCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCC
Confidence 0011 1267888766655421
Q ss_pred -CCeEEEEEcCCCCeEecccc----ce--EEEEEcCcEEEEEeCCCCeEEEEeCCcchhhhHHH
Q psy9327 269 -NHIKYAIVNGDHGIIRTLDL----PI--YITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLAL 325 (641)
Q Consensus 269 -~~~k~~l~~~~~g~I~~~d~----p~--~~~~~~g~~v~~~~~dg~i~v~~~~~~~~~~k~~l 325 (641)
.++.+..|+..+|.+. |.. +. ......++.++.++.|+.+++|+..+++..++..+
T Consensus 435 ~~~g~l~A~D~~tG~~~-W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~ 497 (668)
T 1kv9_A 435 VVSGALLAWDPVKQKAA-WKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEA 497 (668)
T ss_dssp GCEEEEEEEETTTTEEE-EEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CccceEEEEeCCCCcEE-EEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecC
Confidence 2367777887777653 211 11 12445788999999999999999998887765544
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=0.0028 Score=73.42 Aligned_cols=267 Identities=10% Similarity=0.099 Sum_probs=160.3
Q ss_pred eEEEEEccCCCeEEEEeCCCcEEEEECccCcccccc-cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 12 V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~-~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
|.++...+++.+.+ |+.++.+..||..+++..... ..+...|.++...+++.+.+..
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt--------------------- 232 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVAT--------------------- 232 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEE---------------------
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEE---------------------
Confidence 88888888886444 665545888997766543221 1235678888888877755544
Q ss_pred eeeEEEeeCCCeEEEEECCCCeeEEEEcc-------CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc--
Q psy9327 91 FRIKSVLGDDYKIKVWNYKQRKCIFTLLG-------HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG-- 161 (641)
Q Consensus 91 ~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~-------h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~-- 161 (641)
.++-+..||..+++....... ....|.++...+++.+.+ |+.+ -|.+||..+++.......
T Consensus 233 --------~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~ 302 (795)
T 4a2l_A 233 --------EGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPV 302 (795)
T ss_dssp --------BSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTT
T ss_pred --------CCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCC
Confidence 344488999887765433221 135799999998887554 4444 689999887764433211
Q ss_pred -----CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC------CCceeeecccCCCceeeeeeeeeeCCC
Q psy9327 162 -----HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG------MGKLVLSMKSKHPIWKYCKPVKYCNPK 230 (641)
Q Consensus 162 -----h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~------~~~~v~s~~~~~~v~~~~~~l~s~~~d 230 (641)
....|.++...++|.+ ..|+.++-|..||..+......... .+..|.++..... ..+..|..+
T Consensus 303 ~~~~l~~~~i~~i~~D~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~-----g~lWiGt~~ 376 (795)
T 4a2l_A 303 ENGSLSQRSVRSIFMDSQGGM-WLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKD-----KNLWIGTND 376 (795)
T ss_dssp STTSCSSSCEEEEEECTTSCE-EEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTT-----SCEEEEESS
T ss_pred CCCCCCCCcEEEEEEeCCcCE-EEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCC-----CCEEEEECC
Confidence 2356999999888874 4577778899998765443221110 1122333221110 113344456
Q ss_pred eeEEEecCCCcceeeec----------CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEecccc--------ceE-
Q psy9327 231 HTLHICNRKMEPLCNIH----------ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDL--------PIY- 291 (641)
Q Consensus 231 ~~I~i~d~~~~~~~~~~----------~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~--------p~~- 291 (641)
+-+..+|.....+..+. ....|.+++.+++|..|+.|+.++-+..++.+++.+..+.. .+.
T Consensus 377 ~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~ 456 (795)
T 4a2l_A 377 GGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYA 456 (795)
T ss_dssp SCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEE
T ss_pred CCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEE
Confidence 67788885544443332 13568899999998867777765557777777776654421 122
Q ss_pred EEEEcCcEEEEEeCCCCeEEEEeCCc
Q psy9327 292 ITKIKGNQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 292 ~~~~~g~~v~~~~~dg~i~v~~~~~~ 317 (641)
+..+....++.++.+ .+..++.++.
T Consensus 457 i~~d~~g~lwigt~~-Gl~~~~~~~~ 481 (795)
T 4a2l_A 457 ILPDGEGNLWLGTLS-ALVRFNPEQR 481 (795)
T ss_dssp EEECSSSCEEEEESS-CEEEEETTTT
T ss_pred EEECCCCCEEEEecC-ceeEEeCCCC
Confidence 233445566666663 3555555443
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.15 E-value=0.00041 Score=68.73 Aligned_cols=162 Identities=10% Similarity=0.097 Sum_probs=107.5
Q ss_pred eeccCCCCeEEEEEccCCCeE-EEEeCCCcEEEEECccCcccccccc-cccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 4 KFETKSARVKGLSFHPKRPWI-LSSLHNGVIQLWDYRMNTLLEKFDE-HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~L-asg~~dg~I~iWD~~~~~~l~~~~~-h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.+.+-.+.+.+++|+|++..| ++...++.|...|.. ++.+.++.- -.....+|++.+++.++++.-
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E----------- 88 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDE----------- 88 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEET-----------
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEEC-----------
Confidence 344556789999999987655 457778999999987 877777632 225678899999888767654
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCee---EEEEc------cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC-
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC---IFTLL------GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ- 151 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~---~~~~~------~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~- 151 (641)
.++.+.++++..... +.... ......-+++|+|.+..|.++.......+|.++
T Consensus 89 -----------------~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g 151 (255)
T 3qqz_A 89 -----------------RDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNG 151 (255)
T ss_dssp -----------------TTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEES
T ss_pred -----------------CCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcc
Confidence 667788887654432 22221 134457899999998777766665544555443
Q ss_pred --CCeeEEEEc-------cCCCCEEEEEEecCC-CEEEEEeCCCeEEEEecCC
Q psy9327 152 --SRNCICVLT-------GHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 152 --~~~~i~~l~-------~h~~~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~ 194 (641)
....+..+. .+...+.+++++|.. .+++....++.+.++|.+.
T Consensus 152 ~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g 204 (255)
T 3qqz_A 152 LLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVG 204 (255)
T ss_dssp TTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTC
T ss_pred cccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCC
Confidence 111122221 133457899999964 5566666677888888765
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.13 E-value=0.0013 Score=66.90 Aligned_cols=223 Identities=10% Similarity=0.034 Sum_probs=128.6
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
....+++|+++|+++++...++.|..||...+ ....+ ...+...++++.+++.++++..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~-~~~~~p~gia~~~dG~l~vad~------------------- 90 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHA-TVEGKVSGLAFTSNGDLVATGW------------------- 90 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEE-ECSSEEEEEEECTTSCEEEEEE-------------------
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEE-eCCCCceeEEEcCCCcEEEEec-------------------
Confidence 56789999999997777768899999997643 33322 2335688999999999666553
Q ss_pred ceeeEEEeeCC-CeEEEEECCCCeeEEEEc-cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee-EEEEc------
Q psy9327 90 LFRIKSVLGDD-YKIKVWNYKQRKCIFTLL-GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC-ICVLT------ 160 (641)
Q Consensus 90 ~~~~~~~~s~D-g~I~vWD~~t~~~~~~~~-~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~-i~~l~------ 160 (641)
..+ ..|..+|..+++...... ........++..+++..+++...++.|.++|..+++. +....
T Consensus 91 --------~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~ 162 (306)
T 2p4o_A 91 --------NADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARS 162 (306)
T ss_dssp --------CTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCS
T ss_pred --------cCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccc
Confidence 122 357777877776543222 1223345566656555555555688999999876532 22111
Q ss_pred ---cCCCCEEEEEEecCCCEE-EEEeCCCeEEEEecCC-Cce--eeeccCC-CceeeecccCCCceeeeeeeeeeCCCee
Q psy9327 161 ---GHNHYVMCAQFHPTDDIV-VSASLDQTIRVWDISG-LRK--KNVAPGM-GKLVLSMKSKHPIWKYCKPVKYCNPKHT 232 (641)
Q Consensus 161 ---~h~~~V~sl~fsp~g~~l-vSgs~DgtI~IWD~~~-~~~--~~~~~~~-~~~v~s~~~~~~v~~~~~~l~s~~~d~~ 232 (641)
+.......+ +|++..+ ++-+..++|..+|+.. ++. ...+... ...-+++.....+| .+....+.
T Consensus 163 ~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~------va~~~~~~ 234 (306)
T 2p4o_A 163 NSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLY------GATHIYNS 234 (306)
T ss_dssp STTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEE------EECBTTCC
T ss_pred cccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEE------EEeCCCCe
Confidence 112234555 8888655 4555678999999875 221 1111000 00000111111111 12224567
Q ss_pred EEEecCCCcc--eeeecC-CcceEEEEEc---CCccEEEEecC
Q psy9327 233 LHICNRKMEP--LCNIHE-NTRVKSGAWD---ESGVFIYTTSN 269 (641)
Q Consensus 233 I~i~d~~~~~--~~~~~~-~~~I~sla~~---p~g~~L~t~s~ 269 (641)
|..+|..+.. +..+.. .....+++|. |++..|+.++.
T Consensus 235 V~~~~~~G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 235 VVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EEEECTTCCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred EEEECCCCCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 8888865543 222333 2567889998 78777776654
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=0.0013 Score=76.39 Aligned_cols=267 Identities=9% Similarity=0.088 Sum_probs=156.1
Q ss_pred eEEEEEccCCCeEEEEeCCCcEEEEECccCccccccccc-ccC-eEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEH-EGP-VRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 12 V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h-~~~-V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
|.++...++|.+.+ ++. +.+..||..+++.......+ ... |.++...+++.+.+..
T Consensus 133 i~~i~~d~~g~lwi-~t~-~gl~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt-------------------- 190 (795)
T 4a2l_A 133 VNGIEEISPEQLLI-STP-EGLIMFDIKESKFIDDSFSTAMHKTIASTLYRQGDQIYIGT-------------------- 190 (795)
T ss_dssp CCEEEEEETTEEEE-EET-TEEEEEETTTTEEECSSSCHHHHTCCEEEEEEETTEEEEEE--------------------
T ss_pred EEEEEECCCCCEEE-EEC-CceEEEECCCCEEEeccCCCCCCcceEEEEECCCCCEEEEE--------------------
Confidence 88888888887554 444 44889997765432211111 223 8889888888665543
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEE-ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc-------
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTL-LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG------- 161 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~-~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~------- 161 (641)
.++.+..||..+++..... ..+...|.++...+++.+.+ |+.++.+..||..+++.......
T Consensus 191 ---------~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l 260 (795)
T 4a2l_A 191 ---------STDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYLHSPSNPKSI 260 (795)
T ss_dssp ---------SSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEECCCTTCTTSC
T ss_pred ---------CCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEeecCCCCcccc
Confidence 4545889998877643321 12356788898888876554 44455588999887765433221
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC-------CceeeecccCCCceeeeeeeeeeCCCeeEE
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM-------GKLVLSMKSKHPIWKYCKPVKYCNPKHTLH 234 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~-------~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~ 234 (641)
....|.++...++|.+.+ |+.+ -+.+||..+.+........ +..|.++.... ...+..|..++-+.
T Consensus 261 ~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~-----~g~lWigt~~~Gl~ 333 (795)
T 4a2l_A 261 SSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDS-----QGGMWLGTYFGGLN 333 (795)
T ss_dssp SCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECT-----TSCEEEEESSSCEE
T ss_pred CCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeC-----CcCEEEEECCCCeE
Confidence 135699999988887554 4445 5889998776544332111 12222221110 01133444556677
Q ss_pred EecCCCcceeeec--------CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEecccc------------ceE-EE
Q psy9327 235 ICNRKMEPLCNIH--------ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDL------------PIY-IT 293 (641)
Q Consensus 235 i~d~~~~~~~~~~--------~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~------------p~~-~~ 293 (641)
.++.....+..+. ....|.++..+++|. |+.|+.++-+..++...+.+..+.. .+. +.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~ 412 (795)
T 4a2l_A 334 YYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVY 412 (795)
T ss_dssp EECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEE
T ss_pred EeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEE
Confidence 7774433333222 145689999998876 6667766556667766665543321 122 23
Q ss_pred EEcCcE-EEEEeCCCCeEEEEeCCcc
Q psy9327 294 KIKGNQ-VYYLDRECSPHVLRIDPTE 318 (641)
Q Consensus 294 ~~~g~~-v~~~~~dg~i~v~~~~~~~ 318 (641)
.+.... ++.+..++-+..++.+++.
T Consensus 413 ~d~~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 413 VDEKKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp EETTTTEEEEEETTTEEEEEETTTCC
T ss_pred EcCCCCEEEEEeCcCceeEEeCCCCc
Confidence 344455 7777776667776655543
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.12 E-value=2.5e-05 Score=86.03 Aligned_cols=177 Identities=10% Similarity=-0.025 Sum_probs=118.0
Q ss_pred CCeEEEEE-c-cCCCeEEEEe------------------CCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEe
Q psy9327 10 ARVKGLSF-H-PKRPWILSSL------------------HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69 (641)
Q Consensus 10 ~~V~~l~f-s-pdg~~Lasg~------------------~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sg 69 (641)
....++++ + |++.++++++ .++.+.+.|..+.+.+.++.--. .-..++++|+|.+++++
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt 212 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFST 212 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEE
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEE
Confidence 45788998 5 9999998885 24689999999988877775322 44778999999999998
Q ss_pred ceeeEEeeec---------eeeec------ccCCcceeeEEEeeCCCeEEEEECCC--Cee-EEEEccCCCCeEEEEEcc
Q psy9327 70 GKMIVMAYQG---------CILES------RNEPCLFRIKSVLGDDYKIKVWNYKQ--RKC-IFTLLGHLDYIRTTFFHH 131 (641)
Q Consensus 70 s~~~~~~~~~---------~~~~~------~~~~~~~~~~~~~s~Dg~I~vWD~~t--~~~-~~~~~~h~~~V~~v~fsp 131 (641)
+......+.- .+... ...+...... -+.|.|.|..+ ++. +..+..- ....++.++|
T Consensus 213 ~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~-----i~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sP 286 (595)
T 1fwx_A 213 SYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE-----LNGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAP 286 (595)
T ss_dssp ESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE-----ETTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECT
T ss_pred ecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE-----ECcEEEEeCcccCCceeEEEEecC-CCceEEEEcC
Confidence 7322110000 00000 0000000111 14599999998 555 5555432 2446899999
Q ss_pred CCCEEEEEe-CCCeEEEEECCCCe------------eEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 132 EYPWILSAS-DDQTIRIWYWQSRN------------CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 132 ~~~~l~sgs-~Dg~I~vWd~~~~~------------~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
||+++++++ .+.+|.++|+.+.+ ...... -......++|+|+|...++.-.|+.|.+||+..
T Consensus 287 DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 287 DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 999776655 68899999998653 223332 334678899999995556677899999999876
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.08 E-value=9.5e-05 Score=81.41 Aligned_cols=215 Identities=10% Similarity=0.053 Sum_probs=139.6
Q ss_pred cCCCeEEEEeC-CCcEEEEECccCcccccccc-cccCeEEEEE-e-CCCCEEEEeceeeEE-eeeceeeecccCCcceee
Q psy9327 19 PKRPWILSSLH-NGVIQLWDYRMNTLLEKFDE-HEGPVRGICF-H-NQQPIFVSGGKMIVM-AYQGCILESRNEPCLFRI 93 (641)
Q Consensus 19 pdg~~Lasg~~-dg~I~iWD~~~~~~l~~~~~-h~~~V~~i~f-s-p~~~~l~sgs~~~~~-~~~~~~~~~~~~~~~~~~ 93 (641)
+||+++..... ++.|.+-|+.+.+....++- ......++++ + |++.+++++++.... .-+|.. .
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~-----------l 167 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTN-----------M 167 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSS-----------T
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcc-----------c
Confidence 38888877665 56799999999887664432 2345789998 5 999999888621110 001111 1
Q ss_pred EEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCC------------------------------
Q psy9327 94 KSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ------------------------------ 143 (641)
Q Consensus 94 ~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg------------------------------ 143 (641)
...--.++.+.+.|..+.+...++.--. ....++++|+|+++++++.+.
T Consensus 168 ~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~ 246 (595)
T 1fwx_A 168 EDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIA 246 (595)
T ss_dssp TCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHH
T ss_pred ccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEecc
Confidence 1111256789999999999988876322 456788999999999888553
Q ss_pred --------eEEEEECCC--Cee-EEEEccCCCCEEEEEEecCCCEEEEEe-CCCeEEEEecCCCceeeeccCCCceeeec
Q psy9327 144 --------TIRIWYWQS--RNC-ICVLTGHNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDISGLRKKNVAPGMGKLVLSM 211 (641)
Q Consensus 144 --------~I~vWd~~~--~~~-i~~l~~h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~~~~~~~~~~~~~~v~s~ 211 (641)
.|.|.|.++ ++. +..+.. .....++.++|||+++++++ .+.+|.++|+.+.+.. +.+ + +
T Consensus 247 ~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~--~~~--~----l 317 (595)
T 1fwx_A 247 AGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAV--FYE--N----A 317 (595)
T ss_dssp HTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHH--HHS--C----C
T ss_pred CCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccc--ccc--c----c
Confidence 366777766 433 344431 12345789999999777665 5789999999864321 000 0 0
Q ss_pred ccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEec-CCeEEEEEcCCC
Q psy9327 212 KSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTS-NHIKYAIVNGDH 280 (641)
Q Consensus 212 ~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s-~~~k~~l~~~~~ 280 (641)
+.+......+..+.....++|+|+| .+|++. -+..+..|+.+.
T Consensus 318 -------------------------~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 318 -------------------------DPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp -------------------------CGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred -------------------------CcccceEEEcCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 0011222333446677889999999 777765 677888888654
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.06 E-value=0.00062 Score=78.54 Aligned_cols=158 Identities=9% Similarity=0.046 Sum_probs=98.7
Q ss_pred CeEEEEEc-cCCCeEEEEeC-CC----cEEEEECccC-ccccc-ccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 11 RVKGLSFH-PKRPWILSSLH-NG----VIQLWDYRMN-TLLEK-FDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 11 ~V~~l~fs-pdg~~Lasg~~-dg----~I~iWD~~~~-~~l~~-~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
.+.+.+|| |||++||-+.. +| +|+++|+.++ +.+.. +. ....+++|+||++.|+..... .
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d------~--- 242 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKD------E--- 242 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEEC------T---
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEEC------C---
Confidence 57889999 99998885543 33 4999999988 64321 21 223568999999888776510 0
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCee--EEEEc-cCCCCeEEEEEccCCCEEEEEe---CCCeEEEEECCCC--e
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLL-GHLDYIRTTFFHHEYPWILSAS---DDQTIRIWYWQSR--N 154 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~--~~~~~-~h~~~V~~v~fsp~~~~l~sgs---~Dg~I~vWd~~~~--~ 154 (641)
......|.++++.++.. ...+. .+......+.|+|++++|+..+ ....|+++|+.++ .
T Consensus 243 --------------~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~ 308 (751)
T 2xe4_A 243 --------------TLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAH 308 (751)
T ss_dssp --------------TCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTC
T ss_pred --------------CCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCC
Confidence 00113688888887642 23333 2334567889999999887655 3457888998875 2
Q ss_pred e-EEEE-ccCCCCEEEEEEecCCCEEEEEeCC--C--eEEEEecCC
Q psy9327 155 C-ICVL-TGHNHYVMCAQFHPTDDIVVSASLD--Q--TIRVWDISG 194 (641)
Q Consensus 155 ~-i~~l-~~h~~~V~sl~fsp~g~~lvSgs~D--g--tI~IWD~~~ 194 (641)
. +..+ .+..+...++.|+..+.+++....+ + .|..+|+.+
T Consensus 309 ~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 309 NTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp CCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred ceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 2 1333 3344555666666544455555444 2 566667664
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.01 E-value=0.0015 Score=70.06 Aligned_cols=155 Identities=12% Similarity=0.125 Sum_probs=100.8
Q ss_pred CCeEEEEEcc-CCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 10 ARVKGLSFHP-KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 10 ~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
.....++++| ++..|..+...+.|+.+|...++. ..+........+|+|++++.+|.++..
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v-~~~~~~~~~P~~ia~d~~G~~lyvad~----------------- 198 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYV-STVYSGLSKVRTICWTHEADSMIITND----------------- 198 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEE-EEEECCCSCEEEEEECTTSSEEEEEEC-----------------
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEE-EEEecCCCCcceEEEeCCCCEEEEEeC-----------------
Confidence 3567899998 455566665558899999876654 333334556789999999996666641
Q ss_pred cceeeEEEeeCCC----eEEEEECCCCeeE--EEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeeEEEEc-
Q psy9327 89 CLFRIKSVLGDDY----KIKVWNYKQRKCI--FTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQSRNCICVLT- 160 (641)
Q Consensus 89 ~~~~~~~~~s~Dg----~I~vWD~~t~~~~--~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~- 160 (641)
.++ .+.+.+. .+... ..+.. .....+++++| ++.++++-..++.|..+|...+.......
T Consensus 199 ----------~~~~~~~~v~~~~~-~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~ 266 (430)
T 3tc9_A 199 ----------QNNNDRPNNYILTR-ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTI 266 (430)
T ss_dssp ----------CSCTTSEEEEEEEG-GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred ----------CCCcccceEEEEeC-CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEc
Confidence 111 2333332 22111 22221 23456788999 77777777778899999998776422222
Q ss_pred cCCCCEEEEEEecCCC-EEEEEeCCCeEEEEecCC
Q psy9327 161 GHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISG 194 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~ 194 (641)
+.......++|+|+|+ ++++-...+.|..+|...
T Consensus 267 ~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 267 QDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 2224578899999999 455555678999988764
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=0.00077 Score=75.42 Aligned_cols=274 Identities=8% Similarity=0.017 Sum_probs=161.0
Q ss_pred CCeEEEEeC-CCcEEEEEC-ccCccccccccccc-----------CeEEEEEeCCCCE----EEEeceeeEEeeeceeee
Q psy9327 21 RPWILSSLH-NGVIQLWDY-RMNTLLEKFDEHEG-----------PVRGICFHNQQPI----FVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 21 g~~Lasg~~-dg~I~iWD~-~~~~~l~~~~~h~~-----------~V~~i~fsp~~~~----l~sgs~~~~~~~~~~~~~ 83 (641)
+..++.++. ++.|.-+|. .+|+.+.+++.... ...+++.+|.+.. ++.++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t------------- 128 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQ------------- 128 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEEC-------------
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEc-------------
Confidence 446777777 899999999 89998877753221 1123455443322 55555
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC----CeEE-EEEccCCCEEEEEe------CCCeEEEEECCC
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD----YIRT-TFFHHEYPWILSAS------DDQTIRIWYWQS 152 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~----~V~~-v~fsp~~~~l~sgs------~Dg~I~vWd~~~ 152 (641)
.|+.+..+|.++|+.+........ .+.+ -.. .++ .++.++ .++.|+-+|.++
T Consensus 129 ---------------~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~T 191 (599)
T 1w6s_A 129 ---------------LDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKT 191 (599)
T ss_dssp ---------------TTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTT
T ss_pred ---------------CCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCC
Confidence 799999999999999887653220 1111 111 134 444444 389999999999
Q ss_pred CeeEEEEccCCCC-------------------------------------E-EEEEEecCCCEEEEEeCCC---------
Q psy9327 153 RNCICVLTGHNHY-------------------------------------V-MCAQFHPTDDIVVSASLDQ--------- 185 (641)
Q Consensus 153 ~~~i~~l~~h~~~-------------------------------------V-~sl~fsp~g~~lvSgs~Dg--------- 185 (641)
++.+..+...... + ...++.++..+++.++.++
T Consensus 192 G~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~ 271 (599)
T 1w6s_A 192 GEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRP 271 (599)
T ss_dssp CCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSC
T ss_pred CcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccC
Confidence 9988776532111 0 1345667777888777653
Q ss_pred -------eEEEEecCCCceeeeccCCCceeeecc-cCCCce-eee-------eeeeeeCCCeeEEEec-CCCcceeeecC
Q psy9327 186 -------TIRVWDISGLRKKNVAPGMGKLVLSMK-SKHPIW-KYC-------KPVKYCNPKHTLHICN-RKMEPLCNIHE 248 (641)
Q Consensus 186 -------tI~IWD~~~~~~~~~~~~~~~~v~s~~-~~~~v~-~~~-------~~l~s~~~d~~I~i~d-~~~~~~~~~~~ 248 (641)
+|..+|..+++.+=.+....+....+. ...|+. +.. ..+..+..++.+.+.| .+++.+.....
T Consensus 272 gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~ 351 (599)
T 1w6s_A 272 GDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKL 351 (599)
T ss_dssp SCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred CCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccc
Confidence 899999999887644432111100000 011111 110 1134466788888888 44555443321
Q ss_pred C--------------cce--------------------------EEEEEcCCccEEEEecC-------------------
Q psy9327 249 N--------------TRV--------------------------KSGAWDESGVFIYTTSN------------------- 269 (641)
Q Consensus 249 ~--------------~~I--------------------------~sla~~p~g~~L~t~s~------------------- 269 (641)
. .++ ..+++||+...++...+
T Consensus 352 ~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~ 431 (599)
T 1w6s_A 352 DDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFF 431 (599)
T ss_dssp STTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCC
T ss_pred cCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcce
Confidence 1 111 24678887666665432
Q ss_pred --------------------CeEEEEEcCCCCeEecccc----ceE--EEEEcCcEEEEEeCCCCeEEEEeCCcchhhhH
Q psy9327 270 --------------------HIKYAIVNGDHGIIRTLDL----PIY--ITKIKGNQVYYLDRECSPHVLRIDPTEFKFKL 323 (641)
Q Consensus 270 --------------------~~k~~l~~~~~g~I~~~d~----p~~--~~~~~g~~v~~~~~dg~i~v~~~~~~~~~~k~ 323 (641)
.+.+..++..+|.+. |.. |.. .....+..+|..+.|+.+++++..+++...+.
T Consensus 432 ~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~-W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~ 510 (599)
T 1w6s_A 432 VGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYK-WEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKF 510 (599)
T ss_dssp CCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEE-EEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ecccceeccCCcCCcccCCCcCeEEEEECCCCCEE-eEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEe
Confidence 245555555555432 211 111 12346788999999999999999998877665
Q ss_pred HH
Q psy9327 324 AL 325 (641)
Q Consensus 324 ~l 325 (641)
.+
T Consensus 511 ~l 512 (599)
T 1w6s_A 511 KI 512 (599)
T ss_dssp EC
T ss_pred eC
Confidence 44
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.98 E-value=0.0053 Score=63.75 Aligned_cols=155 Identities=11% Similarity=0.010 Sum_probs=98.5
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
+..+|.+..+ ..+|+.+.. ..|+..+....... .+......+.+++|++.+..|..+.
T Consensus 34 d~~~C~~~~~-~~~ll~~~~-~~I~~i~~~g~~~~-~~~~~~~~~~~l~~d~~~~~ly~~D------------------- 91 (349)
T 3v64_C 34 DRRSCKALGP-EPVLLFANR-IDIRQVLPHRSEYT-LLLNNLENAIALDFHHRRELVFWSD------------------- 91 (349)
T ss_dssp TSSCEEESSS-CCEEEEECB-SCEEEECTTSCCEE-EEECSCSCEEEEEEETTTTEEEEEE-------------------
T ss_pred CCCccccccc-CceeEeecc-cceEEEeCCCCeeE-EeecCCCceEEEEEeccccEEEEEe-------------------
Confidence 4445555555 344554433 45877887654332 2222334578999998766666654
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMC 168 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~s 168 (641)
...+.|..++...+.....+........++++.+.+ .++++-...+.|.+.+.........+.........
T Consensus 92 --------~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~ 163 (349)
T 3v64_C 92 --------VTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRA 163 (349)
T ss_dssp --------TTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEE
T ss_pred --------ccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcce
Confidence 277899999998765444444344556789999754 45566667789999998765443344445567889
Q ss_pred EEEecCCCEEE-EEeCC-CeEEEEecCC
Q psy9327 169 AQFHPTDDIVV-SASLD-QTIRVWDISG 194 (641)
Q Consensus 169 l~fsp~g~~lv-Sgs~D-gtI~IWD~~~ 194 (641)
++++|.+..|+ +-..+ +.|...++..
T Consensus 164 iavdp~~g~ly~td~~~~~~I~r~~~dG 191 (349)
T 3v64_C 164 IALHPMEGTIYWTDWGNTPRIEASSMDG 191 (349)
T ss_dssp EEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred EEEecCcCeEEEeccCCCCEEEEEeCCC
Confidence 99999655444 44444 6677776654
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=97.97 E-value=0.00034 Score=79.55 Aligned_cols=242 Identities=9% Similarity=0.031 Sum_probs=145.6
Q ss_pred CCeEEEEeCCCcEEEEECccCcccccccccccC-eEEEEEeC--CCCEEEEeceeeEEeeeceeeecccCCcceeeEEEe
Q psy9327 21 RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGP-VRGICFHN--QQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVL 97 (641)
Q Consensus 21 g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~-V~~i~fsp--~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (641)
+..++.++.||.|..+|..+|+.+.+++..... ...+..+| .+..++++... .. .
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~---------------~~-------~ 174 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGG---------------AE-------Y 174 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBC---------------TT-------T
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCC---------------CC-------c
Confidence 457888889999999999999988777542110 00000011 12234443200 00 0
Q ss_pred eCCCeEEEEECCCCeeEEEEccC--C-C----------------------------CeEEEEEccCCCEEEEEeCCC---
Q psy9327 98 GDDYKIKVWNYKQRKCIFTLLGH--L-D----------------------------YIRTTFFHHEYPWILSASDDQ--- 143 (641)
Q Consensus 98 s~Dg~I~vWD~~t~~~~~~~~~h--~-~----------------------------~V~~v~fsp~~~~l~sgs~Dg--- 143 (641)
+.++.|..+|.++|+.+.++... . . ....+++.|+...++.++.++
T Consensus 175 ~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w 254 (668)
T 1kv9_A 175 GVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPW 254 (668)
T ss_dssp CCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESS
T ss_pred CCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcc
Confidence 02689999999999999887531 0 0 012368888888888887776
Q ss_pred ----------------eEEEEECCCCeeEEEEcc--CC-------CCEEEEEEecCCC---EEEEEeCCCeEEEEecCCC
Q psy9327 144 ----------------TIRIWYWQSRNCICVLTG--HN-------HYVMCAQFHPTDD---IVVSASLDQTIRVWDISGL 195 (641)
Q Consensus 144 ----------------~I~vWd~~~~~~i~~l~~--h~-------~~V~sl~fsp~g~---~lvSgs~DgtI~IWD~~~~ 195 (641)
.|..+|.++++.+..+.. |. .+.....+..+|. .++.++.+|.+.++|..++
T Consensus 255 ~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG 334 (668)
T 1kv9_A 255 NREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNG 334 (668)
T ss_dssp CHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred ccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCC
Confidence 499999999998877753 32 2333333444665 6889999999999999999
Q ss_pred ceeeeccC------------CCceee--------------------------ecccCCCceee-----ee----------
Q psy9327 196 RKKNVAPG------------MGKLVL--------------------------SMKSKHPIWKY-----CK---------- 222 (641)
Q Consensus 196 ~~~~~~~~------------~~~~v~--------------------------s~~~~~~v~~~-----~~---------- 222 (641)
+.+...+- .+..+. +.......+-+ +.
T Consensus 335 ~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~ 414 (668)
T 1kv9_A 335 KLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFV 414 (668)
T ss_dssp CEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCC
T ss_pred CEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccc
Confidence 87632211 011110 00000000000 00
Q ss_pred ---eee------------eeCCCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe
Q psy9327 223 ---PVK------------YCNPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR 284 (641)
Q Consensus 223 ---~l~------------s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~ 284 (641)
.+. ....++.+..|| .+++.+.......+.........+..++.++.++.+..++.++|.+.
T Consensus 415 ~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 415 TRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp CCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence 000 112347899999 56666656555555554555556778888889999999998877643
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.96 E-value=0.0077 Score=69.57 Aligned_cols=256 Identities=10% Similarity=0.089 Sum_probs=152.5
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccc----cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF----DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~----~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
...|.++...++|. |..|+.++-+..||..+++.. .+ ......|.++...+++.+.+..
T Consensus 362 ~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~~v~~i~~d~~g~lWigt--------------- 424 (781)
T 3v9f_A 362 NKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAI-YNKENRELLSNSVLCSLKDSEGNLWFGT--------------- 424 (781)
T ss_dssp SSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEE-CC-----CCCSBEEEEEECTTSCEEEEE---------------
T ss_pred CcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEE-EccCCCCCCCcceEEEEECCCCCEEEEe---------------
Confidence 35699999988887 556665666889997665332 22 1234678999888777765533
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc--cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL--GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~--~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h 162 (641)
.++-+..+|..+++...... .....|.++...+++.+.+ |+. +.+..||..+++........
T Consensus 425 --------------~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~ 488 (781)
T 3v9f_A 425 --------------YLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTS 488 (781)
T ss_dssp --------------TTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTT
T ss_pred --------------ccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCc
Confidence 55678889988776433221 1346799999888887544 444 56889998876543332222
Q ss_pred -----CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC---Cceeeeccc--CCCceeeeeeeeeeCCCee
Q psy9327 163 -----NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM---GKLVLSMKS--KHPIWKYCKPVKYCNPKHT 232 (641)
Q Consensus 163 -----~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~---~~~v~s~~~--~~~v~~~~~~l~s~~~d~~ 232 (641)
...|.++...++|.+.+ |+.++-+..||..+.+........ ...+.++.. ...+| .+..+|.
T Consensus 489 ~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW-------i~T~~Gl 560 (781)
T 3v9f_A 489 NSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMW-------LATGEGL 560 (781)
T ss_dssp TSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEE-------EEETTEE
T ss_pred ccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEE-------EEECCCc
Confidence 46799999888887655 444344777888766543322111 122333221 12222 2334555
Q ss_pred EEEecCCCcceeeecC-----CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEeccccc----------eEEEEEcC
Q psy9327 233 LHICNRKMEPLCNIHE-----NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLP----------IYITKIKG 297 (641)
Q Consensus 233 I~i~d~~~~~~~~~~~-----~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~p----------~~~~~~~g 297 (641)
+..+|.....+..+.. ...|.++..+++|. |+.++.+| +..++.+++.++.++.. -......+
T Consensus 561 v~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~-lW~~t~~G-l~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~ 638 (781)
T 3v9f_A 561 VCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGN-IWASTNTG-ISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHN 638 (781)
T ss_dssp EEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSC-EEEECSSC-EEEEETTTTEEEEECGGGTCCSSCEEEEEEEECTT
T ss_pred eEEECCCCCcEEEccccCCCCCceEEEEEECCCCC-EEEEcCCc-eEEEECCCCceEEecccCCccccccccCceEECCC
Confidence 4777754443433322 34578889998886 55555555 45556677776655321 12233445
Q ss_pred cEEEEEeCCC
Q psy9327 298 NQVYYLDREC 307 (641)
Q Consensus 298 ~~v~~~~~dg 307 (641)
..++-++.+|
T Consensus 639 G~l~~g~~~G 648 (781)
T 3v9f_A 639 GLIYFGSING 648 (781)
T ss_dssp SCEEEEETTE
T ss_pred CEEEEECCCc
Confidence 5566666666
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=97.91 E-value=0.002 Score=72.00 Aligned_cols=273 Identities=10% Similarity=0.001 Sum_probs=156.3
Q ss_pred CeEEEEeCCCcEEEEECccCcccccccccccCe---------EEEEEeCCCCEEEEeceeeEEeeeceeeecccCCccee
Q psy9327 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPV---------RGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFR 92 (641)
Q Consensus 22 ~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V---------~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~ 92 (641)
..++.++.++.|..+|..+|+.+.+++.....- .+++. .+..++.++
T Consensus 69 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t---------------------- 124 (582)
T 1flg_A 69 GVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGT---------------------- 124 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEE----------------------
T ss_pred CEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEe----------------------
Confidence 345666664459999999999888775432210 11222 123444444
Q ss_pred eEEEeeCCCeEEEEECCCCeeEEEEccCCC----CeE-EEEEcc---CCC-EEEEEe------CCCeEEEEECCCCeeEE
Q psy9327 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLD----YIR-TTFFHH---EYP-WILSAS------DDQTIRIWYWQSRNCIC 157 (641)
Q Consensus 93 ~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~----~V~-~v~fsp---~~~-~l~sgs------~Dg~I~vWd~~~~~~i~ 157 (641)
.|+.+..+|.++|+.+..+..... .+. .-.... +++ .++.++ .++.|.-+|..+++.+.
T Consensus 125 ------~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W 198 (582)
T 1flg_A 125 ------LDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIW 198 (582)
T ss_dssp ------TTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEE
T ss_pred ------CCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEe
Confidence 799999999999999887754321 111 011111 122 555554 37899999999998876
Q ss_pred EEccCCCCE-----------------------------------------EEEEEecCCCEEEEEeC-------------
Q psy9327 158 VLTGHNHYV-----------------------------------------MCAQFHPTDDIVVSASL------------- 183 (641)
Q Consensus 158 ~l~~h~~~V-----------------------------------------~sl~fsp~g~~lvSgs~------------- 183 (641)
........+ ..+++.|+..+++.++.
T Consensus 199 ~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~ 278 (582)
T 1flg_A 199 MRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAK 278 (582)
T ss_dssp EEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCT
T ss_pred ecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccC
Confidence 654211000 13466777777776663
Q ss_pred -------C----CeEEEEecCCCceeeeccCCCceeeecc-cCCCceeee--------eeeeeeCCCeeEEEec-CCCcc
Q psy9327 184 -------D----QTIRVWDISGLRKKNVAPGMGKLVLSMK-SKHPIWKYC--------KPVKYCNPKHTLHICN-RKMEP 242 (641)
Q Consensus 184 -------D----gtI~IWD~~~~~~~~~~~~~~~~v~s~~-~~~~v~~~~--------~~l~s~~~d~~I~i~d-~~~~~ 242 (641)
| +.|..+|..+++.+=.+....+...... ...|+..-. ..+..++.++.+.++| .+++.
T Consensus 279 gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 358 (582)
T 1flg_A 279 GGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKL 358 (582)
T ss_dssp TSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCE
T ss_pred CCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCE
Confidence 2 6899999999887654432111000000 012222110 1244566788888888 44554
Q ss_pred eeeecCCc--------------c--------------------------------eEEEEEcCCccEEEEec--------
Q psy9327 243 LCNIHENT--------------R--------------------------------VKSGAWDESGVFIYTTS-------- 268 (641)
Q Consensus 243 ~~~~~~~~--------------~--------------------------------I~sla~~p~g~~L~t~s-------- 268 (641)
+....... + -..+++||+...++...
T Consensus 359 lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~ 438 (582)
T 1flg_A 359 QNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYW 438 (582)
T ss_dssp EEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEE
T ss_pred ecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeee
Confidence 43332211 0 01356777655555433
Q ss_pred -------------------------CCeEEEEEcCCCCeEecccc----ceE--EEEEcCcEEEEEeCCCCeEEEEeCCc
Q psy9327 269 -------------------------NHIKYAIVNGDHGIIRTLDL----PIY--ITKIKGNQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 269 -------------------------~~~k~~l~~~~~g~I~~~d~----p~~--~~~~~g~~v~~~~~dg~i~v~~~~~~ 317 (641)
..+.+..++..+|.+. |.. |.. .....+..++.++.|+.+++++..++
T Consensus 439 ~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~-W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG 517 (582)
T 1flg_A 439 TEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVV-WEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSG 517 (582)
T ss_dssp ECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEE-EEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred cccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEE-EEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCC
Confidence 2466667776666553 221 111 12345788999999999999999988
Q ss_pred chhhhHHH
Q psy9327 318 EFKFKLAL 325 (641)
Q Consensus 318 ~~~~k~~l 325 (641)
+...+..+
T Consensus 518 ~~lW~~~~ 525 (582)
T 1flg_A 518 KELWKFQT 525 (582)
T ss_dssp CEEEEEEC
T ss_pred CEEEEecC
Confidence 87766543
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=97.91 E-value=0.012 Score=59.99 Aligned_cols=143 Identities=5% Similarity=-0.081 Sum_probs=90.1
Q ss_pred eEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCe
Q psy9327 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYK 102 (641)
Q Consensus 23 ~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~ 102 (641)
+|+.+.. ..|+..|+.+.+..... .......+++|++.+..+..+. ..++.
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~-~~~~~p~g~~~d~~~~~ly~~D---------------------------~~~~~ 53 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSD---------------------------LSQRM 53 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEE-CSCSSEEEEEEETTTTEEEEEE---------------------------TTTTE
T ss_pred EEEEECC-CeEEEEECCCcceEehh-cCCCceEEEEEEeCCCEEEEEE---------------------------CCCCc
Confidence 4555544 46899998876544333 2345678999998766666554 26789
Q ss_pred EEEEECCC----CeeEEEEccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCE
Q psy9327 103 IKVWNYKQ----RKCIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177 (641)
Q Consensus 103 I~vWD~~t----~~~~~~~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~ 177 (641)
|..+|... ......+........++++.+.+ .+.++-..++.|.+.|.........+.........++++|.+..
T Consensus 54 I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ 133 (316)
T 1ijq_A 54 ICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGF 133 (316)
T ss_dssp EEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTE
T ss_pred EEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCE
Confidence 99999876 22222333333456789998754 45566677889999998755433333434567889999996665
Q ss_pred EEEEeCC--CeEEEEecCC
Q psy9327 178 VVSASLD--QTIRVWDISG 194 (641)
Q Consensus 178 lvSgs~D--gtI~IWD~~~ 194 (641)
++.+... +.|...++..
T Consensus 134 ly~~d~~~~~~I~~~~~dG 152 (316)
T 1ijq_A 134 MYWTDWGTPAKIKKGGLNG 152 (316)
T ss_dssp EEEEECSSSCEEEEEETTS
T ss_pred EEEEccCCCCeEEEEcCCC
Confidence 5544432 5666666543
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=0.0015 Score=72.77 Aligned_cols=272 Identities=10% Similarity=0.005 Sum_probs=159.2
Q ss_pred CCeEEEEeC-CCcEEEEEC-ccCccccccccccc-C----------eEEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 21 RPWILSSLH-NGVIQLWDY-RMNTLLEKFDEHEG-P----------VRGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 21 g~~Lasg~~-dg~I~iWD~-~~~~~l~~~~~h~~-~----------V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
+..++.++. ++.|..+|. .+|+.+.+++.... . -.+++. .+..++.++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~----------------- 122 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQ----------------- 122 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEEC-----------------
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEe-----------------
Confidence 445667777 899999999 89988877643211 0 011222 234555554
Q ss_pred CcceeeEEEeeCCCeEEEEECCCCeeEEEEccCC--C--CeEE-EEEccCCCEEEEEeC------CCeEEEEECCCCeeE
Q psy9327 88 PCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL--D--YIRT-TFFHHEYPWILSASD------DQTIRIWYWQSRNCI 156 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~--~--~V~~-v~fsp~~~~l~sgs~------Dg~I~vWd~~~~~~i 156 (641)
.|+.+..+|..+|+.+.++.... . .+.+ -.. .++ .++.++. ++.|..+|.++++.+
T Consensus 123 -----------~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 123 -----------ANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV-AKD-TVLMGCSGAELGVRGAVNAFDLKTGELK 189 (571)
T ss_dssp -----------TTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred -----------CCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE-ECC-EEEEEecCCccCCCCEEEEEECCCCcEE
Confidence 79999999999999988765321 0 1111 011 134 4555544 799999999999988
Q ss_pred EEEccCCCC--------------------------------------EEEEEEecCCCEEEEEeCC--------------
Q psy9327 157 CVLTGHNHY--------------------------------------VMCAQFHPTDDIVVSASLD-------------- 184 (641)
Q Consensus 157 ~~l~~h~~~--------------------------------------V~sl~fsp~g~~lvSgs~D-------------- 184 (641)
.++...... -..+++.++...++.++.+
T Consensus 190 W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~ 269 (571)
T 2ad6_A 190 WRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNK 269 (571)
T ss_dssp EEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCT
T ss_pred EEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCce
Confidence 776532110 0135667776777766532
Q ss_pred --CeEEEEecCCCceeeeccCCCceeeec-ccCCCceeee-------eeeeeeCCCeeEEEec-CCCcceeeecCC----
Q psy9327 185 --QTIRVWDISGLRKKNVAPGMGKLVLSM-KSKHPIWKYC-------KPVKYCNPKHTLHICN-RKMEPLCNIHEN---- 249 (641)
Q Consensus 185 --gtI~IWD~~~~~~~~~~~~~~~~v~s~-~~~~~v~~~~-------~~l~s~~~d~~I~i~d-~~~~~~~~~~~~---- 249 (641)
+.|..+|..+++.+=..+...+..... ....|+..-. ..+..+..++.+...| .+++.+......
T Consensus 270 y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~ 349 (571)
T 2ad6_A 270 WTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVN 349 (571)
T ss_dssp TTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCC
T ss_pred eEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcc
Confidence 369999999988764443211100000 0112221110 1134456678888888 445544433221
Q ss_pred ----------cce--------------------------EEEEEcCCccEEEEecC------------------------
Q psy9327 250 ----------TRV--------------------------KSGAWDESGVFIYTTSN------------------------ 269 (641)
Q Consensus 250 ----------~~I--------------------------~sla~~p~g~~L~t~s~------------------------ 269 (641)
.++ ..++++|++..++..++
T Consensus 350 w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~ 429 (571)
T 2ad6_A 350 VFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATL 429 (571)
T ss_dssp SEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred ccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccc
Confidence 111 24578888777776542
Q ss_pred -------------CeEEEEEcCCCCeEeccccc----e--EEEEEcCcEEEEEeCCCCeEEEEeCCcchhhhHHH
Q psy9327 270 -------------HIKYAIVNGDHGIIRTLDLP----I--YITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLAL 325 (641)
Q Consensus 270 -------------~~k~~l~~~~~g~I~~~d~p----~--~~~~~~g~~v~~~~~dg~i~v~~~~~~~~~~k~~l 325 (641)
.+.+..++..+|.+. |..+ . ......+..++..+.||.+++++..+++...+..+
T Consensus 430 ~~~~~~~~~~~~~~g~l~a~D~~tG~~~-W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~ 503 (571)
T 2ad6_A 430 AMYPGPNGPTKKEMGQIRAFDLTTGKAK-WTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKM 503 (571)
T ss_dssp EEEECTTSTTSCCCEEEEEECTTTCCEE-EEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred eeccCccccCCCCCCeEEEEECCCCCEE-EEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeC
Confidence 467777777776653 2111 1 11234578888899999999999988877665443
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.86 E-value=0.0099 Score=62.59 Aligned_cols=152 Identities=11% Similarity=0.007 Sum_probs=96.6
Q ss_pred EEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCccee
Q psy9327 13 KGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFR 92 (641)
Q Consensus 13 ~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~ 92 (641)
.|-+..+ ..+|+.+.. ..|+..+...+...... .......+++|++.+..|..+.
T Consensus 80 ~C~~~~~-~~~l~~~~~-~~I~~i~~~~~~~~~~~-~~~~~~~gl~~d~~~~~ly~~D---------------------- 134 (386)
T 3v65_B 80 SCKALGP-EPVLLFANR-IDIRQVLPHRSEYTLLL-NNLENAIALDFHHRRELVFWSD---------------------- 134 (386)
T ss_dssp CEEECSS-CCEEEEECB-SCEEEECTTSCCCEEEE-CSCSCEEEEEEETTTTEEEEEE----------------------
T ss_pred eECCccc-cceeEeecC-ccceeeccCCCcEEEEe-cCCCccEEEEEecCCCeEEEEe----------------------
Confidence 3444444 345554443 56888887665433222 3344678999998766666554
Q ss_pred eEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEE
Q psy9327 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQF 171 (641)
Q Consensus 93 ~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~f 171 (641)
...+.|+.++...+.....+........++++.+.+ .++++-...+.|.+.++........+.........+++
T Consensus 135 -----~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giav 209 (386)
T 3v65_B 135 -----VTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIAL 209 (386)
T ss_dssp -----TTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEE
T ss_pred -----CCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEE
Confidence 278899999998765444444444456789999754 45566666788999988755444444445567889999
Q ss_pred ecCCCEEEEEe-CC-CeEEEEecCC
Q psy9327 172 HPTDDIVVSAS-LD-QTIRVWDISG 194 (641)
Q Consensus 172 sp~g~~lvSgs-~D-gtI~IWD~~~ 194 (641)
+|.+..|+.+. .+ +.|...+...
T Consensus 210 dp~~g~ly~td~~~~~~I~r~~~dG 234 (386)
T 3v65_B 210 HPMEGTIYWTDWGNTPRIEASSMDG 234 (386)
T ss_dssp ETTTTEEEEEECSSSCEEEEEETTS
T ss_pred EcCCCeEEEeccCCCCEEEEEeCCC
Confidence 98766554443 33 5666666554
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.85 E-value=0.014 Score=67.33 Aligned_cols=257 Identities=11% Similarity=0.066 Sum_probs=152.9
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc----------ccccCeEEEEEeCCCCEEEEeceeeEEeee
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD----------EHEGPVRGICFHNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~----------~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~ 78 (641)
...|.++...++|. |..|+.++-|..++..++.. ..+. .....|.++...+++.+.+..
T Consensus 312 ~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt--------- 380 (781)
T 3v9f_A 312 NASARYIFQDSFNN-IWIGTWGGGINFISNAPPTF-HTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGT--------- 380 (781)
T ss_dssp SSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSC-EEEC----CCCSSCCSSSCEEEEEECTTSCEEEEE---------
T ss_pred CCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcc-eeeccCccccccCCCCCcceEEEEEcCCCCEEEEe---------
Confidence 46799999999887 66677667788898765432 2221 124579999988877755443
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE---ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL---LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~---~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
.++-|..||..+++..... ......|.++...+++.+.+ |+.++.+..+|.++++.
T Consensus 381 --------------------~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~ 439 (781)
T 3v9f_A 381 --------------------DGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKF 439 (781)
T ss_dssp --------------------BSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEE
T ss_pred --------------------CCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcE
Confidence 4566888887755432211 12346789999888887544 66677899999887764
Q ss_pred EEEEc--cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC-----Cceeeeccc--CCCceeeeeeeee
Q psy9327 156 ICVLT--GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM-----GKLVLSMKS--KHPIWKYCKPVKY 226 (641)
Q Consensus 156 i~~l~--~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~-----~~~v~s~~~--~~~v~~~~~~l~s 226 (641)
..... .....|.++...+++.+.+ |+. +-+..||..+++........ ...+.++.. ...+ ..
T Consensus 440 ~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l-------Wi 510 (781)
T 3v9f_A 440 QIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRF-------WI 510 (781)
T ss_dssp EECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCE-------EE
T ss_pred EEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCE-------EE
Confidence 32221 1346799998887776444 455 56888998776543322111 122332211 1122 22
Q ss_pred eCCCeeEEEecCCCcceeeecC-----CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEecccc----c---e-EEE
Q psy9327 227 CNPKHTLHICNRKMEPLCNIHE-----NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDL----P---I-YIT 293 (641)
Q Consensus 227 ~~~d~~I~i~d~~~~~~~~~~~-----~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~----p---~-~~~ 293 (641)
+..++-+..+|.....+..+.. ...|.++..+++|. ++.++..|-+..++.+++.+..+.. | + .+.
T Consensus 511 gt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWi~T~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~ 589 (781)
T 3v9f_A 511 GTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQ-MWLATGEGLVCFPSARNFDYQVFQRKEGLPNTHIRAIS 589 (781)
T ss_dssp EESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSC-EEEEETTEEEEESCTTTCCCEEECGGGTCSCCCCCEEE
T ss_pred EEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCC-EEEEECCCceEEECCCCCcEEEccccCCCCCceEEEEE
Confidence 3333346667754444443332 45688999998887 4445557765777776665544321 1 2 223
Q ss_pred EEcCcEEEEEeCCC
Q psy9327 294 KIKGNQVYYLDREC 307 (641)
Q Consensus 294 ~~~g~~v~~~~~dg 307 (641)
.+....++.++.+|
T Consensus 590 ~d~~g~lW~~t~~G 603 (781)
T 3v9f_A 590 EDKNGNIWASTNTG 603 (781)
T ss_dssp ECSSSCEEEECSSC
T ss_pred ECCCCCEEEEcCCc
Confidence 44456677776665
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00071 Score=67.44 Aligned_cols=149 Identities=9% Similarity=-0.011 Sum_probs=108.8
Q ss_pred EEEEccCCCeEEE-EeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCccee
Q psy9327 14 GLSFHPKRPWILS-SLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFR 92 (641)
Q Consensus 14 ~l~fspdg~~Las-g~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~ 92 (641)
+++++ +..|+. ...++.+.++|..+.+.+.++..- .+ .+..+++++..++++.
T Consensus 70 Gi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~~-~g~glt~Dg~~l~vs~---------------------- 123 (266)
T 2iwa_A 70 GLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-MK-DGWGLATDGKILYGSD---------------------- 123 (266)
T ss_dssp EEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEECC-SS-SCCEEEECSSSEEEEC----------------------
T ss_pred EEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEECC-CC-CeEEEEECCCEEEEEC----------------------
Confidence 44444 444544 446899999999999988888532 11 2345667887777776
Q ss_pred eEEEeeCCCeEEEEECCCCeeEEEEccCC-----CCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC-----
Q psy9327 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHL-----DYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH----- 162 (641)
Q Consensus 93 ~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~-----~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h----- 162 (641)
.+++|.++|..+.+.+.++.-.. ..+..+.|. ++..++....++.|.+.|..+++.+..+.-.
T Consensus 124 ------gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~ 196 (266)
T 2iwa_A 124 ------GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKK 196 (266)
T ss_dssp ------SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHH
T ss_pred ------CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccc
Confidence 68899999999998888776322 246788888 6766666667899999999999988887521
Q ss_pred --------CCCEEEEEEecCCC-EEEEEeCCCeEEEEecCCC
Q psy9327 163 --------NHYVMCAQFHPTDD-IVVSASLDQTIRVWDISGL 195 (641)
Q Consensus 163 --------~~~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~~ 195 (641)
......++|+|+++ +++++...+++.+.++...
T Consensus 197 ~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 197 LIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp HHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred cccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 13568999999986 5556667889999988664
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=97.73 E-value=0.036 Score=58.59 Aligned_cols=144 Identities=5% Similarity=-0.086 Sum_probs=93.3
Q ss_pred CeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCC
Q psy9327 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDY 101 (641)
Q Consensus 22 ~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg 101 (641)
.+|+.+. ...|+..|+....... +-.....+.+++|++.+..|..+. ...+
T Consensus 84 ~~ll~~~-~~~I~~i~l~~~~~~~-~~~~~~~~~~l~~d~~~~~lywsD---------------------------~~~~ 134 (400)
T 3p5b_L 84 AYLFFTN-RHEVRKMTLDRSEYTS-LIPNLRNVVALDTEVASNRIYWSD---------------------------LSQR 134 (400)
T ss_dssp CEEEEEE-TTEEEEECTTSCSCEE-EECSCSCEEEEEEETTTTEEEEEE---------------------------TTTT
T ss_pred ceeEEec-cceeEEEccCCcceeE-eccccCcceEEeeeeccCceEEEe---------------------------cCCC
Confidence 3555554 4678888887654333 233456788999999766666655 2678
Q ss_pred eEEEEECCCC----eeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCC
Q psy9327 102 KIKVWNYKQR----KCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176 (641)
Q Consensus 102 ~I~vWD~~t~----~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~ 176 (641)
.|+.+++... .....+........++++.+ .+.+.++-...+.|.+.++........+.........++++|.+.
T Consensus 135 ~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g 214 (400)
T 3p5b_L 135 MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHG 214 (400)
T ss_dssp EEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTT
T ss_pred eEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccC
Confidence 9999998752 23333444556788999998 455666667788999999876654444444556688999999665
Q ss_pred EEEEEe-C-CCeEEEEecCC
Q psy9327 177 IVVSAS-L-DQTIRVWDISG 194 (641)
Q Consensus 177 ~lvSgs-~-DgtI~IWD~~~ 194 (641)
.|+.+. . .+.|...++..
T Consensus 215 ~ly~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 215 FMYWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp EEEEEECSSSCCEEEEETTS
T ss_pred eEEEEeCCCCCEEEEEeCCC
Confidence 555443 2 25666666544
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.007 Score=64.85 Aligned_cols=157 Identities=11% Similarity=0.038 Sum_probs=96.0
Q ss_pred CCeEEEEEccC--CCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 10 ARVKGLSFHPK--RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 10 ~~V~~l~fspd--g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
....+++|+|+ +..|+.+...+.|+.+|..+++... +........+++|++++.++++....
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~-~~~~~~~P~giavd~dG~lyVad~~~--------------- 202 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI-KTTNIGQCADVNFTLNGDMVVVDDQS--------------- 202 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE-ECCCCSCEEEEEECTTCCEEEEECCS---------------
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE-eecCCCCccEEEECCCCCEEEEcCCC---------------
Confidence 35678999995 4445555544889999987775543 33345568999999999944443200
Q ss_pred CcceeeEEEeeCCC-eEEEEECCCCee-EEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeeEEEE-c-cC
Q psy9327 88 PCLFRIKSVLGDDY-KIKVWNYKQRKC-IFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQSRNCICVL-T-GH 162 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg-~I~vWD~~t~~~-~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~~~~~i~~l-~-~h 162 (641)
..+. .+...+...+.. ...+. ......+++++| ++.++++-..++.|+.+|..++.....+ . +.
T Consensus 203 ----------~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~ 271 (433)
T 4hw6_A 203 ----------SDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT 271 (433)
T ss_dssp ----------CTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC
T ss_pred ----------CcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC
Confidence 0011 122222221110 01121 233456788999 7776667667889999998877652222 1 12
Q ss_pred CCCEEEEEEecCCCE-EEEEeCCCeEEEEecC
Q psy9327 163 NHYVMCAQFHPTDDI-VVSASLDQTIRVWDIS 193 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~-lvSgs~DgtI~IWD~~ 193 (641)
...-..++|+|+++. .++-...+.|+.+|..
T Consensus 272 ~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 272 KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp CSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 223357999999984 4555567899998875
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=97.71 E-value=0.034 Score=56.55 Aligned_cols=157 Identities=12% Similarity=-0.015 Sum_probs=99.2
Q ss_pred CCeEEEEEccCCCeEE-EEeCCCcEEEEECcc---Cccccc-ccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 10 ARVKGLSFHPKRPWIL-SSLHNGVIQLWDYRM---NTLLEK-FDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 10 ~~V~~l~fspdg~~La-sg~~dg~I~iWD~~~---~~~l~~-~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
....+++|++++..|+ +-..++.|..+|... +..... +...-....++++.+.+..|..+.
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d-------------- 95 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD-------------- 95 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEE--------------
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEE--------------
Confidence 4567999998766555 445578999999875 122222 222223557899987555554443
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeC-C-CeEEEEECCCCeeEEEE-cc
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD-D-QTIRIWYWQSRNCICVL-TG 161 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~-D-g~I~vWd~~~~~~i~~l-~~ 161 (641)
...+.|.+.|.........+.......++++++|.+..+..+.. . +.|...+..... ...+ ..
T Consensus 96 -------------~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~~ 161 (316)
T 1ijq_A 96 -------------SVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTE 161 (316)
T ss_dssp -------------TTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECS
T ss_pred -------------CCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEEEC
Confidence 26789999998754433333334467789999996665544443 3 688888875433 3333 33
Q ss_pred CCCCEEEEEEecCCCEEEEE-eCCCeEEEEecCC
Q psy9327 162 HNHYVMCAQFHPTDDIVVSA-SLDQTIRVWDISG 194 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSg-s~DgtI~IWD~~~ 194 (641)
.......++++|++..|+.+ +..+.|..+|..+
T Consensus 162 ~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 162 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 44568899999977665554 4567899998864
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=0.005 Score=68.84 Aligned_cols=161 Identities=9% Similarity=0.047 Sum_probs=101.7
Q ss_pred EEEccCCCe----EEEEeCCCcEEEEECccCccccccccccc----CeEE-EEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 15 LSFHPKRPW----ILSSLHNGVIQLWDYRMNTLLEKFDEHEG----PVRG-ICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 15 l~fspdg~~----Lasg~~dg~I~iWD~~~~~~l~~~~~h~~----~V~~-i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
++++|.+.. ++.++.|+.+..+|..+|+.+.+...... .+.+ -... ++ .+++++...
T Consensus 111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~------------ 176 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGA------------ 176 (599)
T ss_dssp CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCG------------
T ss_pred eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEeccc------------
Confidence 455444444 88888999999999999998776543210 1110 0111 23 334432000
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCC-------------------------------------e-EEE
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY-------------------------------------I-RTT 127 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~-------------------------------------V-~~v 127 (641)
. .+.++.|..+|.++|+.+.++...... + ..+
T Consensus 177 ------e----~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~ 246 (599)
T 1w6s_A 177 ------E----LGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWY 246 (599)
T ss_dssp ------G----GTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCC
T ss_pred ------c----cCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccce
Confidence 0 003789999999999998887642211 0 134
Q ss_pred EEccCCCEEEEEeCC----------------CeEEEEECCCCeeEEEEcc--CC--------CCEEEEEEe-cCC---CE
Q psy9327 128 FFHHEYPWILSASDD----------------QTIRIWYWQSRNCICVLTG--HN--------HYVMCAQFH-PTD---DI 177 (641)
Q Consensus 128 ~fsp~~~~l~sgs~D----------------g~I~vWd~~~~~~i~~l~~--h~--------~~V~sl~fs-p~g---~~ 177 (641)
++.++...++.++.+ +.|..+|.++++.+..+.. |. .++. +... .+| ..
T Consensus 247 a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~ 325 (599)
T 1w6s_A 247 AYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKL 325 (599)
T ss_dssp EEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEE
T ss_pred eEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEE
Confidence 566777777777655 4899999999998877653 21 1222 2232 467 56
Q ss_pred EEEEeCCCeEEEEecCCCceeee
Q psy9327 178 VVSASLDQTIRVWDISGLRKKNV 200 (641)
Q Consensus 178 lvSgs~DgtI~IWD~~~~~~~~~ 200 (641)
++.++.+|.+.+.|..+++.+-.
T Consensus 326 v~~~~~~G~l~~lD~~tG~~lw~ 348 (599)
T 1w6s_A 326 LTHPDRNGIVYTLDRTDGALVSA 348 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEE
T ss_pred EEEECCCcEEEEEECCCCCEeec
Confidence 78899999999999999887644
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=97.66 E-value=0.0011 Score=65.65 Aligned_cols=134 Identities=7% Similarity=0.021 Sum_probs=98.4
Q ss_pred cCCCeEEEEe-CCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEe
Q psy9327 19 PKRPWILSSL-HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVL 97 (641)
Q Consensus 19 pdg~~Lasg~-~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (641)
++++.|.... .++.+.+||..+.+.+.++.... .+..+++++..|+.+.
T Consensus 94 ~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~Sd--------------------------- 143 (262)
T 3nol_A 94 DWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSD--------------------------- 143 (262)
T ss_dssp EETTEEEEEESSSSEEEEEETTTCCEEEEEECSS---CCCCEEECSSCEEECC---------------------------
T ss_pred EeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC---CceEEecCCCEEEEEC---------------------------
Confidence 3455555444 58999999999999998886432 3344556777777776
Q ss_pred eCCCeEEEEECCCCeeEEEEccCC-----CCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC----------
Q psy9327 98 GDDYKIKVWNYKQRKCIFTLLGHL-----DYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH---------- 162 (641)
Q Consensus 98 s~Dg~I~vWD~~t~~~~~~~~~h~-----~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h---------- 162 (641)
.+++|.++|..+.+.+.++.-.. ..++.+.|. +|..++..-.+..|.+.|.++++.+..+.-.
T Consensus 144 -Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~ 221 (262)
T 3nol_A 144 -GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLP 221 (262)
T ss_dssp -SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCC
T ss_pred -CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCcccccccc
Confidence 57889999999999888876422 334567776 6766666667889999999999988887532
Q ss_pred --CCCEEEEEEecCCCEEEEEeCC
Q psy9327 163 --NHYVMCAQFHPTDDIVVSASLD 184 (641)
Q Consensus 163 --~~~V~sl~fsp~g~~lvSgs~D 184 (641)
.+..+.++|+|+++.|+..+..
T Consensus 222 ~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 222 SPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp SSCCCEEEEEEETTTTEEEEEETT
T ss_pred CcCCceEEEEEcCCCCEEEEECCC
Confidence 2356899999998877776653
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.018 Score=59.66 Aligned_cols=158 Identities=12% Similarity=0.041 Sum_probs=102.3
Q ss_pred CCeEEEEEccCCCeEEEE-eCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 10 ARVKGLSFHPKRPWILSS-LHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg-~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
..+.+++|++.+..|..+ ...+.|..++...+.....+........++++.+.+..|..+.
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d------------------ 134 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTD------------------ 134 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEE------------------
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEc------------------
Confidence 346889999866655544 4678899999876543222222234457899998655555444
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCE-EEEEeCC-CeEEEEECCCCeeEEEEccCCCCE
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPW-ILSASDD-QTIRIWYWQSRNCICVLTGHNHYV 166 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~-l~sgs~D-g~I~vWd~~~~~~i~~l~~h~~~V 166 (641)
...+.|.+.+.........+.......++++++|.+.. +++-..+ +.|...++................
T Consensus 135 ---------~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~P 205 (349)
T 3v64_C 135 ---------SGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWP 205 (349)
T ss_dssp ---------TTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCE
T ss_pred ---------CCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCc
Confidence 26789999998755433334444567799999996554 4454445 788888876433222222334567
Q ss_pred EEEEEecCCCEEEEE-eCCCeEEEEecCC
Q psy9327 167 MCAQFHPTDDIVVSA-SLDQTIRVWDISG 194 (641)
Q Consensus 167 ~sl~fsp~g~~lvSg-s~DgtI~IWD~~~ 194 (641)
..++|+|++..|..+ +..+.|..+|+..
T Consensus 206 nGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 206 NGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 899999876655544 4567888888865
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.021 Score=60.05 Aligned_cols=158 Identities=13% Similarity=0.060 Sum_probs=102.8
Q ss_pred CCeEEEEEccCCCeEE-EEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 10 ARVKGLSFHPKRPWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 10 ~~V~~l~fspdg~~La-sg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
..+.+++|++.+..|+ +-...+.|..++...+.....+........++++.+.+..|..+.
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d------------------ 177 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTD------------------ 177 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEE------------------
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEc------------------
Confidence 4577899998665555 445678899999876543222222233457899998665555544
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEE-EEeCC-CeEEEEECCCCeeEEEEccCCCCE
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDD-QTIRIWYWQSRNCICVLTGHNHYV 166 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~-sgs~D-g~I~vWd~~~~~~i~~l~~h~~~V 166 (641)
...+.|.+.++........+........+++++|.+..+. +-..+ +.|...+.................
T Consensus 178 ---------~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~P 248 (386)
T 3v65_B 178 ---------SGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWP 248 (386)
T ss_dssp ---------TTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCE
T ss_pred ---------CCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCe
Confidence 2677899998875543344444456789999998666544 44444 788888876543333333344567
Q ss_pred EEEEEecCCCEEEE-EeCCCeEEEEecCC
Q psy9327 167 MCAQFHPTDDIVVS-ASLDQTIRVWDISG 194 (641)
Q Consensus 167 ~sl~fsp~g~~lvS-gs~DgtI~IWD~~~ 194 (641)
..++|+|++..|.. -+..+.|..+|+..
T Consensus 249 nGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 249 NGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred eeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 89999987655544 45567888888765
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.007 Score=59.82 Aligned_cols=126 Identities=8% Similarity=0.043 Sum_probs=87.8
Q ss_pred ccccccccccc--CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc
Q psy9327 42 TLLEKFDEHEG--PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG 119 (641)
Q Consensus 42 ~~l~~~~~h~~--~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~ 119 (641)
+.+.++ .|+. -..++.|+. +.+..+.+ .+|.|+++|+++++.+.++ -
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~~-~~Ly~stG----------------------------~~g~v~~iD~~Tgkv~~~~-l 92 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFHQ-GHFFESTG----------------------------HQGTLRQLSLESAQPVWME-R 92 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEET----------------------------TTTEEEECCSSCSSCSEEE-E
T ss_pred EEEEEE-cCCCccccceEEEEC-CEEEEEcC----------------------------CCCEEEEEECCCCcEEeEE-C
Confidence 344555 4543 457899984 55556665 8889999999999988877 2
Q ss_pred CCCC-eEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCcee
Q psy9327 120 HLDY-IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK 198 (641)
Q Consensus 120 h~~~-V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~ 198 (641)
.... --++++.. +.+.++.-.++.+.+||.++.+.+.++..... -..+ .+++..|+.+..+++|.++|..+.+..
T Consensus 93 ~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~e-GwGL--t~Dg~~L~vSdGs~~l~~iDp~T~~v~ 168 (268)
T 3nok_A 93 LGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTRYSGE-GWGL--CYWNGKLVRSDGGTMLTFHEPDGFALV 168 (268)
T ss_dssp CTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEEECSSC-CCCE--EEETTEEEEECSSSEEEEECTTTCCEE
T ss_pred CCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEEeCCCc-eeEE--ecCCCEEEEECCCCEEEEEcCCCCeEE
Confidence 2222 23466643 34555666789999999999999998874322 2333 356888777777999999999998776
Q ss_pred eecc
Q psy9327 199 NVAP 202 (641)
Q Consensus 199 ~~~~ 202 (641)
..++
T Consensus 169 ~~I~ 172 (268)
T 3nok_A 169 GAVQ 172 (268)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6554
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=97.51 E-value=0.06 Score=56.84 Aligned_cols=160 Identities=10% Similarity=-0.053 Sum_probs=104.6
Q ss_pred CCCeEEEEEccCCCeEEEE-eCCCcEEEEECccCc----ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 9 SARVKGLSFHPKRPWILSS-LHNGVIQLWDYRMNT----LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg-~~dg~I~iWD~~~~~----~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
-..+.+++|++.+..|..+ ..++.|+.++..... ....+........++++.+.+..|..+.
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d------------- 177 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD------------- 177 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEE-------------
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEE-------------
Confidence 4568899999866655554 457889999876521 2222222345678999998555555544
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEe-C-CCeEEEEECCCCeeEEEEcc
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS-D-DQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs-~-Dg~I~vWd~~~~~~i~~l~~ 161 (641)
...+.|.+.|.........+.......++++++|.+..|..+. . .+.|...++...........
T Consensus 178 --------------~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~ 243 (400)
T 3p5b_L 178 --------------SVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 243 (400)
T ss_dssp --------------TTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS
T ss_pred --------------CCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC
Confidence 2678999999886654444444556689999999666555443 2 47888888865443333344
Q ss_pred CCCCEEEEEEecCCCEEEEEe-CCCeEEEEecCCC
Q psy9327 162 HNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDISGL 195 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~~ 195 (641)
.......++++|++..|+.+. ..+.|..+|+...
T Consensus 244 ~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 244 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 446788999998777666554 4678888888653
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=97.50 E-value=0.1 Score=52.50 Aligned_cols=199 Identities=11% Similarity=-0.032 Sum_probs=110.2
Q ss_pred cCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc
Q psy9327 52 GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131 (641)
Q Consensus 52 ~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp 131 (641)
....+++|++++.++++-. .++.|..||...+ ....+. -.+.+.++++.+
T Consensus 32 ~~pegia~~~~g~lyv~d~----------------------------~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~ 81 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNH----------------------------EVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTS 81 (306)
T ss_dssp CCEEEEEECTTSCEEEEET----------------------------TTTEEEEECTTCC-EEEEEE-CSSEEEEEEECT
T ss_pred CCcceEEECCCCCEEEEeC----------------------------CCCeEEEECCCCc-eEEEEe-CCCCceeEEEcC
Confidence 4567899999998777765 7889999998754 333332 235688999999
Q ss_pred CCCEEEEEeCC--CeEEEEECCCCeeEEEEc-cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce-eeeccCC---
Q psy9327 132 EYPWILSASDD--QTIRIWYWQSRNCICVLT-GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK-KNVAPGM--- 204 (641)
Q Consensus 132 ~~~~l~sgs~D--g~I~vWd~~~~~~i~~l~-~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~-~~~~~~~--- 204 (641)
++.++++.... ..|..+|..+++...... ........++..+++..+++-+.++.|.++|..+++. .....+.
T Consensus 82 dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~ 161 (306)
T 2p4o_A 82 NGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLAR 161 (306)
T ss_dssp TSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSC
T ss_pred CCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCcccc
Confidence 99976665443 247777877776432222 1223344555555555555555688999999875421 1100000
Q ss_pred CceeeecccCCCceeeee--eeeeeCCCeeEEEecCCC--c--ceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcC
Q psy9327 205 GKLVLSMKSKHPIWKYCK--PVKYCNPKHTLHICNRKM--E--PLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 205 ~~~v~s~~~~~~v~~~~~--~l~s~~~d~~I~i~d~~~--~--~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~ 278 (641)
....-.+...+.+ .... -..+-...+.|..++... . ....+........++++++|.+.++....+++..++.
T Consensus 162 ~~~~~~~~~pngi-s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~ 240 (306)
T 2p4o_A 162 SNSESVFPAANGL-KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAP 240 (306)
T ss_dssp SSTTCCSCSEEEE-EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECT
T ss_pred ccccCCCCcCCCc-CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECC
Confidence 0000000000001 0000 012223456777777332 1 1111212234556889999976666556778888876
Q ss_pred CCCe
Q psy9327 279 DHGI 282 (641)
Q Consensus 279 ~~g~ 282 (641)
+ |.
T Consensus 241 ~-G~ 243 (306)
T 2p4o_A 241 D-RS 243 (306)
T ss_dssp T-CC
T ss_pred C-CC
Confidence 5 44
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=97.50 E-value=0.047 Score=55.76 Aligned_cols=144 Identities=8% Similarity=-0.026 Sum_probs=89.8
Q ss_pred eEEEEeCCCcEEEEECccCcc-cccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCC
Q psy9327 23 WILSSLHNGVIQLWDYRMNTL-LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDY 101 (641)
Q Consensus 23 ~Lasg~~dg~I~iWD~~~~~~-l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg 101 (641)
+|+.+. ...|+..|+..... ....-.....+.+++|++.+..|..+. ...+
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D---------------------------~~~~ 57 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSD---------------------------VSEE 57 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEE---------------------------TTTT
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEE---------------------------CCCC
Confidence 444443 46799999876531 111112234567899998666555554 2788
Q ss_pred eEEEEECCCCee-EEEEccCCCCeEEEEEccC-CCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEE
Q psy9327 102 KIKVWNYKQRKC-IFTLLGHLDYIRTTFFHHE-YPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVV 179 (641)
Q Consensus 102 ~I~vWD~~t~~~-~~~~~~h~~~V~~v~fsp~-~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lv 179 (641)
.|+.++...+.. ...+........++++.+. +.++++-...+.|.+++.........+.........++++|.+..|+
T Consensus 58 ~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly 137 (318)
T 3sov_A 58 AIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY 137 (318)
T ss_dssp EEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEE
T ss_pred cEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEE
Confidence 999999876632 1222223345678999974 55556666778999999875443333334556788999999765555
Q ss_pred EEeC--CCeEEEEecCC
Q psy9327 180 SASL--DQTIRVWDISG 194 (641)
Q Consensus 180 Sgs~--DgtI~IWD~~~ 194 (641)
.+.. .+.|...+...
T Consensus 138 ~td~~~~~~I~r~~~dG 154 (318)
T 3sov_A 138 WTDWGEVPKIERAGMDG 154 (318)
T ss_dssp EEECSSSCEEEEEETTS
T ss_pred EEecCCCCEEEEEEcCC
Confidence 4442 45666666553
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=0.0024 Score=71.16 Aligned_cols=159 Identities=11% Similarity=-0.011 Sum_probs=107.0
Q ss_pred EEEEccCCCeEEEEeCC----------------CcEEEEECccCcccccccc--cc--------cCeEEEEEeCCCC---
Q psy9327 14 GLSFHPKRPWILSSLHN----------------GVIQLWDYRMNTLLEKFDE--HE--------GPVRGICFHNQQP--- 64 (641)
Q Consensus 14 ~l~fspdg~~Lasg~~d----------------g~I~iWD~~~~~~l~~~~~--h~--------~~V~~i~fsp~~~--- 64 (641)
.+++.++...++.+..+ +.|..+|..+|+.+.+++. |+ .++. +...++|.
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~ 317 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTP 317 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEE
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEE
Confidence 36777777777766532 3599999999998877753 21 2222 22224553
Q ss_pred EEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCC-------------CCe-------
Q psy9327 65 IFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL-------------DYI------- 124 (641)
Q Consensus 65 ~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~-------------~~V------- 124 (641)
.++.++ .+|.+.++|..+|+.+..+.-.. .++
T Consensus 318 ~v~~~~----------------------------~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~ 369 (571)
T 2ad6_A 318 LLSHID----------------------------RNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFAT 369 (571)
T ss_dssp EEEEEC----------------------------TTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCC
T ss_pred EEEEeC----------------------------CCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCC
Confidence 455555 89999999999999887764221 111
Q ss_pred -------------------EEEEEccCCCEEEEEe-------------------------------------CCCeEEEE
Q psy9327 125 -------------------RTTFFHHEYPWILSAS-------------------------------------DDQTIRIW 148 (641)
Q Consensus 125 -------------------~~v~fsp~~~~l~sgs-------------------------------------~Dg~I~vW 148 (641)
..++++|+..+++..+ .++.+..|
T Consensus 370 ~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~ 449 (571)
T 2ad6_A 370 RMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAF 449 (571)
T ss_dssp CTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEE
T ss_pred CCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEE
Confidence 2357888777666553 35789999
Q ss_pred ECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 149 d~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
|..+++.+.++... ..+.+..+...+..++.++.|+.++.||.++++.+-.+.
T Consensus 450 D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 450 DLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp CTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEe
Confidence 99999887776522 233333333456788889999999999999988776554
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0037 Score=63.86 Aligned_cols=173 Identities=10% Similarity=0.099 Sum_probs=112.0
Q ss_pred ccCCCCeEEEEEccCCCeEEEEe-CCCcEEEEECccCcccc-cccc----c--ccCeEEEEE---eCCCCEEEEeceeeE
Q psy9327 6 ETKSARVKGLSFHPKRPWILSSL-HNGVIQLWDYRMNTLLE-KFDE----H--EGPVRGICF---HNQQPIFVSGGKMIV 74 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~~Lasg~-~dg~I~iWD~~~~~~l~-~~~~----h--~~~V~~i~f---sp~~~~l~sgs~~~~ 74 (641)
++..---.+.+|++.+..+..++ ..|+|..||...+.... .+.. . ...+.+|.| .|+++++++.....
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~- 87 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK- 87 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT-
T ss_pred cCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc-
Confidence 33344455789998666666555 79999999987553322 3322 1 124689999 68877777542000
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEECC---CCeeEEEEc--cC-----------CCCeEEEEEccCCCEEEE
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK---QRKCIFTLL--GH-----------LDYIRTTFFHHEYPWILS 138 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~---t~~~~~~~~--~h-----------~~~V~~v~fsp~~~~l~s 138 (641)
........ -+.+..+..+|+. +++.+.... .. .....+++..++|+..++
T Consensus 88 ----------af~~~g~~----~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt 153 (334)
T 2p9w_A 88 ----------SFNFADQS----SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVA 153 (334)
T ss_dssp ----------TTCTTSCC----SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEE
T ss_pred ----------cccccccc----cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEe
Confidence 00000000 0136789999999 887766554 11 124789999999999999
Q ss_pred EeCC-CeEEEEECCCCeeEEEEc--c----CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 139 ASDD-QTIRIWYWQSRNCICVLT--G----HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 139 gs~D-g~I~vWd~~~~~~i~~l~--~----h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
++.- +.|...+.... .+..+. . .....+.++++|+|..|+....++.+..+|+..
T Consensus 154 ~s~~~~~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 154 FALGMPAIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEESSCEEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CCCCCCeEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 9888 88888776543 233221 1 112356899999999888887799999999883
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0042 Score=60.78 Aligned_cols=131 Identities=10% Similarity=0.019 Sum_probs=95.2
Q ss_pred CCeEE-EEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeC
Q psy9327 21 RPWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGD 99 (641)
Q Consensus 21 g~~La-sg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 99 (641)
++.|. ....++.+.+||..+.+.+.++..... +..+.+++..|+++. .
T Consensus 74 ~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~---Gwglt~dg~~L~vSd----------------------------g 122 (243)
T 3mbr_X 74 RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGE---GWALTSDDSHLYMSD----------------------------G 122 (243)
T ss_dssp TTEEEEEESSSSEEEEEETTTTEEEEEEECSSC---CCEEEECSSCEEEEC----------------------------S
T ss_pred CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCC---ceEEeeCCCEEEEEC----------------------------C
Confidence 44444 445689999999999999988864332 334446777777776 5
Q ss_pred CCeEEEEECCCCeeEEEEccCC-----CCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC------------
Q psy9327 100 DYKIKVWNYKQRKCIFTLLGHL-----DYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH------------ 162 (641)
Q Consensus 100 Dg~I~vWD~~t~~~~~~~~~h~-----~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h------------ 162 (641)
+++|.++|..+.+.+.++.-.. ..+..+.+. +|..++..-.+..|.+.|.++++.+..+.-.
T Consensus 123 s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~ 201 (243)
T 3mbr_X 123 TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDS 201 (243)
T ss_dssp SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCT
T ss_pred CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCC
Confidence 8899999999999888876432 345667766 5665655556889999999999988887511
Q ss_pred -CCCEEEEEEecCCCEEEEEeC
Q psy9327 163 -NHYVMCAQFHPTDDIVVSASL 183 (641)
Q Consensus 163 -~~~V~sl~fsp~g~~lvSgs~ 183 (641)
.+..+.++++|+++.|+..+.
T Consensus 202 ~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 202 TNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TSSCEEEEEEETTTTEEEEEET
T ss_pred cCCceEEEEEcCCCCEEEEECC
Confidence 135689999998877766664
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.004 Score=63.47 Aligned_cols=154 Identities=8% Similarity=-0.043 Sum_probs=101.1
Q ss_pred CCeEEEEEcc-CCCeEEEEeC-----------------CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEece
Q psy9327 10 ARVKGLSFHP-KRPWILSSLH-----------------NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71 (641)
Q Consensus 10 ~~V~~l~fsp-dg~~Lasg~~-----------------dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~ 71 (641)
.....+++.| +|.+.++-.. +|.|..||..+++.. .+........+|+|+|++..+..+.
T Consensus 126 ~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~-~~~~~~~~p~gia~~~dg~~lyv~d- 203 (322)
T 2fp8_A 126 KWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETT-LLLKELHVPGGAEVSADSSFVLVAE- 203 (322)
T ss_dssp SCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEE-EEEEEESCCCEEEECTTSSEEEEEE-
T ss_pred cccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEE-EeccCCccCcceEECCCCCEEEEEe-
Confidence 3578899999 9986665432 367888887666432 2222223456899999998776664
Q ss_pred eeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe--eEEEEccCCCCeEEEEEccCCCEEEEEeC--------
Q psy9327 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK--CIFTLLGHLDYIRTTFFHHEYPWILSASD-------- 141 (641)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~--~~~~~~~h~~~V~~v~fsp~~~~l~sgs~-------- 141 (641)
+.++.|.++|+.... ....+....+ ...+++.++|.++++...
T Consensus 204 --------------------------~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~ 256 (322)
T 2fp8_A 204 --------------------------FLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHG 256 (322)
T ss_dssp --------------------------GGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTS
T ss_pred --------------------------CCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccC
Confidence 267899999987421 1112211223 788999999997777654
Q ss_pred --CCeEEEEECCCCeeEEEEccC----CCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 142 --DQTIRIWYWQSRNCICVLTGH----NHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 142 --Dg~I~vWd~~~~~~i~~l~~h----~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
.+.|..+|.. ++.+..+... ...++++++ .++.+.++...++.|.++++..
T Consensus 257 ~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 257 RVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp CEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred CCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 4678888864 6666666533 235667776 4666666666788999998764
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.055 Score=58.57 Aligned_cols=156 Identities=11% Similarity=0.081 Sum_probs=96.4
Q ss_pred CeEEEEEccC-C-CeEEEEeCCCcEEEEECccCcccccccc---cccCeEEEEE-------eCCCCEEEEeceeeEEeee
Q psy9327 11 RVKGLSFHPK-R-PWILSSLHNGVIQLWDYRMNTLLEKFDE---HEGPVRGICF-------HNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 11 ~V~~l~fspd-g-~~Lasg~~dg~I~iWD~~~~~~l~~~~~---h~~~V~~i~f-------sp~~~~l~sgs~~~~~~~~ 78 (641)
....|+|+|. + +++++....+.|++.|...+........ .......|+| ++++..++++..
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~------- 212 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAID------- 212 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEEC-------
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeC-------
Confidence 4679999983 4 4444444457799999877654332222 2235799999 999997766651
Q ss_pred ceeeecccCCcceeeEEEeeCC------CeEEEEECCC-CeeE-----EEEccCCCCeEEEEEcc-CCCEEEEEeCCCeE
Q psy9327 79 GCILESRNEPCLFRIKSVLGDD------YKIKVWNYKQ-RKCI-----FTLLGHLDYIRTTFFHH-EYPWILSASDDQTI 145 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~D------g~I~vWD~~t-~~~~-----~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I 145 (641)
.+ ..|.+.+... +... ..+... ....+++++| ++.++++-..++.|
T Consensus 213 --------------------~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V 271 (496)
T 3kya_A 213 --------------------YDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQV 271 (496)
T ss_dssp --------------------CCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEE
T ss_pred --------------------CCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEE
Confidence 22 1355665333 1211 122211 1334678899 55666777788899
Q ss_pred EEEECC-------CCee-----------EEE-E-ccCCCCEEEEEEecCCCE-EEEEeCCCeEEEEecCC
Q psy9327 146 RIWYWQ-------SRNC-----------ICV-L-TGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISG 194 (641)
Q Consensus 146 ~vWd~~-------~~~~-----------i~~-l-~~h~~~V~sl~fsp~g~~-lvSgs~DgtI~IWD~~~ 194 (641)
..+|+. ++.. ... + .+.......++|+|+|+. .++=+....|+.+|...
T Consensus 272 ~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 272 FRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp EEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 999987 5543 112 1 122345679999999995 45555678899977643
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=97.43 E-value=0.0077 Score=68.15 Aligned_cols=114 Identities=13% Similarity=0.125 Sum_probs=72.0
Q ss_pred EEEEcc-CCCeEEEEeCCC-----------cEEEEECccCcccc--ccc-ccccCeEEEEEeCCCCEEEEeceeeEEeee
Q psy9327 14 GLSFHP-KRPWILSSLHNG-----------VIQLWDYRMNTLLE--KFD-EHEGPVRGICFHNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 14 ~l~fsp-dg~~Lasg~~dg-----------~I~iWD~~~~~~l~--~~~-~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~ 78 (641)
+.++.| ++++++.|+.++ .+.+||..+++-.. .+. .+.....++++.+++.+++.||.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~------- 262 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGN------- 262 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSS-------
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCC-------
Confidence 567777 888888887643 58899988775322 121 13334456788899999999982
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC-CeEEEEEccCCCEEEEEe-CC-----CeEEEEECC
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD-YIRTTFFHHEYPWILSAS-DD-----QTIRIWYWQ 151 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~-~V~~v~fsp~~~~l~sgs-~D-----g~I~vWd~~ 151 (641)
.+..+.+||..+++....-..+.. .-.+++..+++++++.|+ .+ ..+.+||..
T Consensus 263 --------------------~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 263 --------------------DAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp --------------------STTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred --------------------CCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 445788888777654332111111 112445566777777777 34 467788877
Q ss_pred CCe
Q psy9327 152 SRN 154 (641)
Q Consensus 152 ~~~ 154 (641)
+.+
T Consensus 323 t~~ 325 (656)
T 1k3i_A 323 SKT 325 (656)
T ss_dssp TTE
T ss_pred CCc
Confidence 654
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.013 Score=57.86 Aligned_cols=212 Identities=12% Similarity=0.085 Sum_probs=123.6
Q ss_pred ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc-CCCCeEEE
Q psy9327 49 EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG-HLDYIRTT 127 (641)
Q Consensus 49 ~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~-h~~~V~~v 127 (641)
+-...+.+++|+|++..|.+... .++.|...|.. ++.+.++.- -....-++
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d---------------------------~~~~I~~ld~~-g~v~~~i~l~g~~D~EGI 75 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTIN---------------------------KPAAIVEMTTN-GDLIRTIPLDFVKDLETI 75 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEE---------------------------TTEEEEEEETT-CCEEEEEECSSCSSEEEE
T ss_pred CcccCcceeEEeCCCCEEEEEEC---------------------------CCCeEEEEeCC-CCEEEEEecCCCCChHHe
Confidence 33457999999998765555431 78899999998 888777632 22457789
Q ss_pred EEccCCCEEEEEeCCCeEEEEECCCCee---EEEEc------cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCcee
Q psy9327 128 FFHHEYPWILSASDDQTIRIWYWQSRNC---ICVLT------GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK 198 (641)
Q Consensus 128 ~fsp~~~~l~sgs~Dg~I~vWd~~~~~~---i~~l~------~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~ 198 (641)
++.+++.++++.-.++.+.++++..... +.... ..+.....++|+|++..|+++.......+|.++..
T Consensus 76 a~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~--- 152 (255)
T 3qqz_A 76 EYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGL--- 152 (255)
T ss_dssp EECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEEST---
T ss_pred EEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEccc---
Confidence 9999887767766778899998765442 22221 13445689999999988887777666666666520
Q ss_pred eeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEE-EecCCeEEEEEc
Q psy9327 199 NVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIY-TTSNHIKYAIVN 277 (641)
Q Consensus 199 ~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~-t~s~~~k~~l~~ 277 (641)
..+..-.+. ..+. ++... ....+.+++++|....++ .......+..++
T Consensus 153 --~~~~~l~i~----~~~~------------------~~~~~-------~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d 201 (255)
T 3qqz_A 153 --LSSNELHIS----KDKA------------------LQRQF-------TLDDVSGAEFNQQKNTLLVLSHESRALQEVT 201 (255)
T ss_dssp --TCSSCCEEE----ECHH------------------HHHTC-------CSSCCCEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred --ccCCceeee----cchh------------------hcccc-------ccCCceeEEEcCCCCeEEEEECCCCeEEEEc
Confidence 000000000 0000 00000 123457789998754444 444566677777
Q ss_pred CCCCeEeccccceEE--E--EEcCcEEEEEeCCCCeEEEEeCCcchhhh
Q psy9327 278 GDHGIIRTLDLPIYI--T--KIKGNQVYYLDRECSPHVLRIDPTEFKFK 322 (641)
Q Consensus 278 ~~~g~I~~~d~p~~~--~--~~~g~~v~~~~~dg~i~v~~~~~~~~~~k 322 (641)
.+...+..+.++-.. . ...+.-=++.+.+|++++.+=.+..|+|+
T Consensus 202 ~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~ 250 (255)
T 3qqz_A 202 LVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFT 250 (255)
T ss_dssp TTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEE
T ss_pred CCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEE
Confidence 665555555443100 0 00111225666777766665555555553
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0046 Score=71.22 Aligned_cols=117 Identities=8% Similarity=0.063 Sum_probs=78.4
Q ss_pred CeEEEEEe-CCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC-eeEE-EEccCCCCeEEEEE
Q psy9327 53 PVRGICFH-NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR-KCIF-TLLGHLDYIRTTFF 129 (641)
Q Consensus 53 ~V~~i~fs-p~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~-~~~~-~~~~h~~~V~~v~f 129 (641)
.+...+|| |||++++-+.+. .++...+|+++|+.++ +.+. .+. .....++|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~-----------------------~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~W 228 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDM-----------------------SGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVW 228 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEES-----------------------SSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEE
T ss_pred EEeeeEecCCCCCEEEEEEeC-----------------------CCCceEEEEEEECCCCCEeCCcccc---CceeeEEE
Confidence 67889999 999988866410 0012346999999998 6321 111 11346789
Q ss_pred ccCCCEEEEEeCC-----CeEEEEECCCCee--EEEEc-cCCCCEEEEEEecCCCEEEEEeC---CCeEEEEecCCC
Q psy9327 130 HHEYPWILSASDD-----QTIRIWYWQSRNC--ICVLT-GHNHYVMCAQFHPTDDIVVSASL---DQTIRVWDISGL 195 (641)
Q Consensus 130 sp~~~~l~sgs~D-----g~I~vWd~~~~~~--i~~l~-~h~~~V~sl~fsp~g~~lvSgs~---DgtI~IWD~~~~ 195 (641)
+||++.|+....| ..|+.+++.++.. ...+. .+......+.|+|||++|+..+. ...|.++|+.++
T Consensus 229 spDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 229 GPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp CSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred ecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 9999888776655 3688899887642 22332 23345678899999998776553 346888898775
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0039 Score=69.53 Aligned_cols=159 Identities=8% Similarity=-0.017 Sum_probs=104.9
Q ss_pred EEEEccCCCeEEEEeC--------------------C----CcEEEEECccCcccccccc--cc--------cCeEEEEE
Q psy9327 14 GLSFHPKRPWILSSLH--------------------N----GVIQLWDYRMNTLLEKFDE--HE--------GPVRGICF 59 (641)
Q Consensus 14 ~l~fspdg~~Lasg~~--------------------d----g~I~iWD~~~~~~l~~~~~--h~--------~~V~~i~f 59 (641)
..+++|+..+++.+.. | +.|..+|..+|+.+..++. |+ .++. +..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~ 328 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDY 328 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eee
Confidence 4678888787776663 2 6899999999998887753 32 1222 122
Q ss_pred e-CCCC---EEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCC-------------C
Q psy9327 60 H-NQQP---IFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL-------------D 122 (641)
Q Consensus 60 s-p~~~---~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~-------------~ 122 (641)
. .+|. .++.++ .+|.+.++|..+|+.+..+.... .
T Consensus 329 ~~~~G~~~~~v~~~~----------------------------~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~ 380 (582)
T 1flg_A 329 KAKDGKIVKATAHAD----------------------------RNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGR 380 (582)
T ss_dssp ECSSSCEEEEEEEEC----------------------------TTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCC
T ss_pred ecCCCCEEEEEEEEC----------------------------CCceEEEEECCCCCEecccccccCccccccccccCCC
Confidence 1 3453 555555 89999999999999887765331 0
Q ss_pred Ce--------------------------------EEEEEccCCCEEEEEe------------------------------
Q psy9327 123 YI--------------------------------RTTFFHHEYPWILSAS------------------------------ 140 (641)
Q Consensus 123 ~V--------------------------------~~v~fsp~~~~l~sgs------------------------------ 140 (641)
++ ..++++|+...+++..
T Consensus 381 p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~ 460 (582)
T 1flg_A 381 PVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRM 460 (582)
T ss_dssp EEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEES
T ss_pred EeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCC
Confidence 00 1345666554444332
Q ss_pred ---CCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 141 ---DDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 141 ---~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
.++.|..||..+++.+.....+. ++..-.....+.+++.++.|+.++.||.++++.+-.+.
T Consensus 461 ~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~ 524 (582)
T 1flg_A 461 YDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp CSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCCCcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEec
Confidence 36889999999998876665322 22221122247788889999999999999988775554
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=97.27 E-value=0.26 Score=51.95 Aligned_cols=289 Identities=11% Similarity=0.097 Sum_probs=178.2
Q ss_pred EEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeE
Q psy9327 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIK 94 (641)
Q Consensus 15 l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~ 94 (641)
.-.||..+.+|.=. ..+++|+|+++.+.+..+.- ..+|.--.|-.+..+-++
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~~l~lV-------------------------- 122 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTVALV-------------------------- 122 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETTEEEEE--------------------------
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCCCeEEEE--------------------------
Confidence 45788888777665 67899999999887777643 446666777655544333
Q ss_pred EEeeCCCeEEEEECCC-CeeEEEEccCC----CCeEEEEEccCCCEEEEEeC-------CCeEEEEECCCCeeEEEEccC
Q psy9327 95 SVLGDDYKIKVWNYKQ-RKCIFTLLGHL----DYIRTTFFHHEYPWILSASD-------DQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 95 ~~~s~Dg~I~vWD~~t-~~~~~~~~~h~----~~V~~v~fsp~~~~l~sgs~-------Dg~I~vWd~~~~~~i~~l~~h 162 (641)
.+..|..|++.. ..+...|..|. ..|..-..+++++|++..|- .|.+.+|..+.+ .-+.+.||
T Consensus 123 ----T~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGh 197 (494)
T 1bpo_A 123 ----TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGH 197 (494)
T ss_dssp ----CSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCS
T ss_pred ----cCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheee
Confidence 356899999974 46777777664 35777788899999875442 478889997644 45677888
Q ss_pred CCCEEEEEEecCC---CEEEEEeCC---CeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEe
Q psy9327 163 NHYVMCAQFHPTD---DIVVSASLD---QTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236 (641)
Q Consensus 163 ~~~V~sl~fsp~g---~~lvSgs~D---gtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~ 236 (641)
.....++.+.-+. .++.-+... +.++|-++.....- .+...+.... +.++
T Consensus 198 aa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~--~~~f~kk~vd---------v~fp------------- 253 (494)
T 1bpo_A 198 AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG--NQPFPKKAVD---------VFFP------------- 253 (494)
T ss_dssp EEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTT--CCCCCCEEEE---------CCCC-------------
T ss_pred eeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccC--CCCccceeee---------eeCC-------------
Confidence 6554333332111 233334432 57777777431000 0111000000 0000
Q ss_pred cCCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe----ccccceEEEEE--cCcEEEEEeCCCCeE
Q psy9327 237 NRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR----TLDLPIYITKI--KGNQVYYLDRECSPH 310 (641)
Q Consensus 237 d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~----~~d~p~~~~~~--~g~~v~~~~~dg~i~ 310 (641)
. . ....-..++..++.-..++..+.-|-+.+++.++|+.- +-..+++.... ...-+++..+.|.+.
T Consensus 254 --p-----e-~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl 325 (494)
T 1bpo_A 254 --P-----E-AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVL 325 (494)
T ss_dssp --T-----T-STTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEE
T ss_pred --c-----c-cccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEE
Confidence 0 0 01333445677777677888888888999999888743 33445555443 356788899999999
Q ss_pred EEEeCCcchhhhHHHhccchHHHHHHHhcCcccc---chHHHHHHHHhcCCccchhhhhhh
Q psy9327 311 VLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVG---EVGERIKILKSCGQTSLAYLTAAT 368 (641)
Q Consensus 311 v~~~~~~~~~~k~~l~~~~~~~~l~~~~~s~l~~---D~~~r~~~l~~~g~~~la~~~a~~ 368 (641)
...+|....+--..-...+.+-.+++....+|-| =..++.+.+...|++.-|-..|..
T Consensus 326 ~v~v~e~~ivpyi~~~l~n~~lA~~lA~R~~LpGAd~L~~~~F~~l~~~g~y~~AA~~aA~ 386 (494)
T 1bpo_A 326 SVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGAEELFARKFNALFAQGNYSEAAKVAAN 386 (494)
T ss_dssp EEEECTTTHHHHHHHTTCCHHHHHHHHHHTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred EEEEccccchhhhhhccCCHHHHHHHHHhcCCccHHHHHHHHHHHHHHcCCHHHHHHHHHh
Confidence 9999987776333322344455677777777766 344556667777777665554443
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=97.14 E-value=0.04 Score=56.27 Aligned_cols=164 Identities=10% Similarity=-0.026 Sum_probs=102.5
Q ss_pred CeEEEEEccCC-CeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 11 RVKGLSFHPKR-PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 11 ~V~~l~fspdg-~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
...++++.+.+ .+.++-...+.|.+++.........+........++++.|.+..+..+..
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~------------------ 141 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDW------------------ 141 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEEC------------------
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEec------------------
Confidence 45678888744 44455556788999997643222222233445689999997665555530
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEE-EEEeCCCeEEEEECCCCeeEEEEccCCCCEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWI-LSASDDQTIRIWYWQSRNCICVLTGHNHYVMC 168 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l-~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~s 168 (641)
+..+.|...+.............-....++++++++..| ++-+..+.|..+|+..........+.......
T Consensus 142 --------~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~g 213 (318)
T 3sov_A 142 --------GEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFA 213 (318)
T ss_dssp --------SSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEE
T ss_pred --------CCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceE
Confidence 135788888876433222233334567899999965544 55556789999998743332223334556677
Q ss_pred EEEecCCCEEEEEeCCCeEEEEecCCCceeeec
Q psy9327 169 AQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 169 l~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~ 201 (641)
+++. .+..+++-...+.|..+|..+++....+
T Consensus 214 lav~-~~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 214 LTLF-EDILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp EEEE-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEEe-CCEEEEEecCCCeEEEEECCCCCceEEE
Confidence 7775 3456666667789999998776654444
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.18 Score=58.04 Aligned_cols=160 Identities=10% Similarity=-0.040 Sum_probs=104.5
Q ss_pred CCCeEEEEEccCCCeEE-EEeCCCcEEEEECccC----cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 9 SARVKGLSFHPKRPWIL-SSLHNGVIQLWDYRMN----TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 9 ~~~V~~l~fspdg~~La-sg~~dg~I~iWD~~~~----~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
...+.+|+|++.+..|+ +-...+.|+.+++... .....+........+|++.+.+..|..+.
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD------------- 489 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD------------- 489 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEE-------------
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEe-------------
Confidence 35678999998555444 5555788988887642 22222222345567899998776666655
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEe-CC-CeEEEEECCCCeeEEEEcc
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS-DD-QTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs-~D-g~I~vWd~~~~~~i~~l~~ 161 (641)
...+.|.+.++........+.......++|+++|.+.+|+.+. .+ ..|...++........+..
T Consensus 490 --------------~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~ 555 (791)
T 3m0c_C 490 --------------SVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 555 (791)
T ss_dssp --------------TTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS
T ss_pred --------------cCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeC
Confidence 3788999999885544333444556789999999765555443 33 7899988865444334444
Q ss_pred CCCCEEEEEEecCCCEEEEEe-CCCeEEEEecCCC
Q psy9327 162 HNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDISGL 195 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~~ 195 (641)
.......|++.+.+..|+.+. ....|...|+.+.
T Consensus 556 ~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 556 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 456789999998766665554 4567888887653
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.32 Score=49.50 Aligned_cols=258 Identities=10% Similarity=-0.007 Sum_probs=130.9
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccc----cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF----DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~----~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
...+.++.|.+++..++ ++.+|.| +...+.|+.-... ......+.+|.|++ +..++++
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~g--------------- 96 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIVG--------------- 96 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEEE---------------
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEEE---------------
Confidence 45799999988777777 4567765 3333444332222 12345789999987 4444444
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCC---eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE-EEc
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQR---KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC-VLT 160 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~---~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~-~l~ 160 (641)
.++.|.. ....| +.+.....+.+.+..+.+.+++..++++ .++.|.. ....++... ...
T Consensus 97 --------------~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~ 159 (327)
T 2xbg_A 97 --------------EPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQ 159 (327)
T ss_dssp --------------ETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEEC
T ss_pred --------------CCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeec
Confidence 4454433 22222 2221111233557788887777666555 4565432 122233222 233
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEec--CCCceeeeccCCCceeeeccc--CCCceeeeeeeeeeCCCeeEEEe
Q psy9327 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI--SGLRKKNVAPGMGKLVLSMKS--KHPIWKYCKPVKYCNPKHTLHIC 236 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~--~~~~~~~~~~~~~~~v~s~~~--~~~v~~~~~~l~s~~~d~~I~i~ 236 (641)
++...+..+.+.|++.+++.+...+..+-+|- .+.+.... .....+..+.. ...+ ..+..++.+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~--~~~~~~~~~~~~~~g~~-------~~~~~~G~~~~s 230 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNR--TTSRRLHNMGFTPDGRL-------WMIVNGGKIAFS 230 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEEC--CSSSCEEEEEECTTSCE-------EEEETTTEEEEE
T ss_pred CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCC--CCCCccceeEECCCCCE-------EEEeCCceEEEe
Confidence 55667899999999888877655555555553 33333321 11122222111 1111 122234555555
Q ss_pred c-CCCcceeeec-----CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCC-eEeccc----c--ceEEE-EEcCcEEEE
Q psy9327 237 N-RKMEPLCNIH-----ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG-IIRTLD----L--PIYIT-KIKGNQVYY 302 (641)
Q Consensus 237 d-~~~~~~~~~~-----~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g-~I~~~d----~--p~~~~-~~~g~~v~~ 302 (641)
+ ..+..+..+. ....+.++++++++..++.+. ++.++.. .+.| +-..+. . .++.. ..++..++.
T Consensus 231 ~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i~~S-~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~ 308 (327)
T 2xbg_A 231 DPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGALLCS-QDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFI 308 (327)
T ss_dssp ETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCEEEE-SSTTSSCEECGGGTTSSSCCCEEEEEETTEEEE
T ss_pred cCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeEEEe-CCCCcccEEcCccCCCCCCeEEEEEECCCceEE
Confidence 2 2233222222 124588899998877666655 4444333 2323 111111 1 12222 235677888
Q ss_pred EeCCCCeEEE
Q psy9327 303 LDRECSPHVL 312 (641)
Q Consensus 303 ~~~dg~i~v~ 312 (641)
...+|.+..+
T Consensus 309 ~G~~G~i~~~ 318 (327)
T 2xbg_A 309 LGQKGILLRY 318 (327)
T ss_dssp ECSTTEEEEE
T ss_pred EcCCceEEEE
Confidence 8888866554
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.26 Score=56.72 Aligned_cols=143 Identities=5% Similarity=-0.090 Sum_probs=90.6
Q ss_pred eEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCe
Q psy9327 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYK 102 (641)
Q Consensus 23 ~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~ 102 (641)
+|+.+. ...|+..++....... +......+.+|+|++....|..+. ...+.
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~-l~~~~~~~~gl~~d~~~~~lY~sD---------------------------~~~~~ 447 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTS-LIPNLRNVVALDTEVASNRIYWSD---------------------------LSQRM 447 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEE-EECSCSSEEEEEEETTTTEEEEEE---------------------------TTTTE
T ss_pred cccccc-ccceeEeeccCCccee-eecCCCceEEEeecccCCeeEEee---------------------------cccee
Confidence 444443 3568888876554322 323445678999999666555554 26788
Q ss_pred EEEEECCCC----eeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCE
Q psy9327 103 IKVWNYKQR----KCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177 (641)
Q Consensus 103 I~vWD~~t~----~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~ 177 (641)
|+.+++... .....+........++++.+.+. ++++-...+.|.+.++........+.........|+++|.+..
T Consensus 448 I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~ 527 (791)
T 3m0c_C 448 ICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGF 527 (791)
T ss_dssp EEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTE
T ss_pred EEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCC
Confidence 999998753 23334443556677899998764 5556667889999998765544344445567899999997655
Q ss_pred EEEEe-CC-CeEEEEecCC
Q psy9327 178 VVSAS-LD-QTIRVWDISG 194 (641)
Q Consensus 178 lvSgs-~D-gtI~IWD~~~ 194 (641)
|+.+. .+ +.|.+.++.+
T Consensus 528 LYwtD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 528 MYWTDWGTPAKIKKGGLNG 546 (791)
T ss_dssp EEEEECSSSCEEEEEETTS
T ss_pred EEEecCCCCCeEEEEecCC
Confidence 55444 22 5677776654
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.075 Score=56.77 Aligned_cols=155 Identities=9% Similarity=0.029 Sum_probs=91.7
Q ss_pred CCCCeEEEEEccCCCeEEEEeCC---Cc-EEEEECccCccc--ccccccccCeEEEEEeC-CCCEEEEeceeeEEeeece
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHN---GV-IQLWDYRMNTLL--EKFDEHEGPVRGICFHN-QQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~d---g~-I~iWD~~~~~~l--~~~~~h~~~V~~i~fsp-~~~~l~sgs~~~~~~~~~~ 80 (641)
......+++|+++|+++++...+ .. +...+. .+... ..+ .......+++++| ++.+.++-.
T Consensus 180 ~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~-~~~~~~~~~~-~~~~~P~giavd~~~G~lyv~d~---------- 247 (433)
T 4hw6_A 180 NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTR-ASGFTERLSL-CNARGAKTCAVHPQNGKIYYTRY---------- 247 (433)
T ss_dssp CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECG-GGTTCCEEEE-EECSSBCCCEECTTTCCEEECBT----------
T ss_pred CCCCccEEEECCCCCEEEEcCCCCcccceEEEEEC-CCCeeccccc-cccCCCCEEEEeCCCCeEEEEEC----------
Confidence 34568899999999944444321 12 322332 22111 111 1223456788999 666555544
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE-cc-CCCCeEEEEEccCCC-EEEEEeCCCeEEEEECC--CCee
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL-LG-HLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQ--SRNC 155 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~-~~-h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~--~~~~ 155 (641)
.++.|+.+|..++.....+ .. ....-..++|+|+++ ++++-...+.|+.+++. ++..
T Consensus 248 ------------------~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~ 309 (433)
T 4hw6_A 248 ------------------HHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKL 309 (433)
T ss_dssp ------------------TCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCB
T ss_pred ------------------CCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCccc
Confidence 7789999999877652322 21 122335799999998 55566667899998865 2321
Q ss_pred --EEEEccC---------------CCCEEEEEE---------ecCCCEEEEEeCCCeEEEEec
Q psy9327 156 --ICVLTGH---------------NHYVMCAQF---------HPTDDIVVSASLDQTIRVWDI 192 (641)
Q Consensus 156 --i~~l~~h---------------~~~V~sl~f---------sp~g~~lvSgs~DgtI~IWD~ 192 (641)
...+.+. ......+++ .+++.+.++-+..+.|+.+|.
T Consensus 310 ~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 310 AVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp CCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred CcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 1122211 234667888 566677776666778888874
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.31 Score=54.54 Aligned_cols=164 Identities=9% Similarity=-0.026 Sum_probs=97.4
Q ss_pred CCeEEEEEccCCC-eEEEEeCCCcEEEEECccCcccccc-cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 10 ARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 10 ~~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~~l~~~-~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
....++++++.+. +.++-..++.|.+.+.... ....+ ...-....+|++.|.+..|..+.-
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~-~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~---------------- 146 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS-LRKVLFWQELDQPRAIALDPSSGFMYWTDW---------------- 146 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSCCCCEEEETTTTEEEEEEC----------------
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC-CEEEEEeCCCCCCceEEEecCCCeEEEecc----------------
Confidence 5678999999555 4455556789999998644 32222 233345678999997665555530
Q ss_pred CcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEE-EEeCCCeEEEEECCCCeeEEEEccCCCCE
Q psy9327 88 PCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWYWQSRNCICVLTGHNHYV 166 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~-sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V 166 (641)
+..+.|...++.................++++++++..|. +-+..+.|...|+..........+.....
T Consensus 147 ----------g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P 216 (619)
T 3s94_A 147 ----------GEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHP 216 (619)
T ss_dssp ----------SSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------C
T ss_pred ----------CCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCc
Confidence 1346777777664333333333445678999998755554 44556789999886543322222122223
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEecCCCceeeec
Q psy9327 167 MCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 167 ~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~ 201 (641)
..+++..+ ...++-...+.|...|..+++....+
T Consensus 217 ~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i 250 (619)
T 3s94_A 217 FALTLFED-ILYWTDWSTHSILACNKYTGEGLREI 250 (619)
T ss_dssp CCEEESSS-EEEEECTTTCSEEEEESSSCCCCEEC
T ss_pred eEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEE
Confidence 45566543 45555556778999998777654443
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.6 Score=47.42 Aligned_cols=226 Identities=8% Similarity=-0.056 Sum_probs=117.4
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc---ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD---EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~---~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
...+.++.|+| +..++ ++.+|.|.. ..+.|+.-.... .+.+.+..+.+.+++..++++.
T Consensus 79 ~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--------------- 140 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN--------------- 140 (327)
T ss_dssp CCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET---------------
T ss_pred CccEEEEEecC-CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC---------------
Confidence 34688999987 44444 456675544 223344333222 2345678888887777666653
Q ss_pred cCCcceeeEEEeeCCCeE-EEEECCCCe-eEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEEC--CCCeeEEEEcc
Q psy9327 86 NEPCLFRIKSVLGDDYKI-KVWNYKQRK-CIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYW--QSRNCICVLTG 161 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I-~vWD~~t~~-~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~--~~~~~i~~l~~ 161 (641)
++.| +-+| .|+ ......++...+..+++.+++.+++.+...+..+-+|- .+-+.+ -.+
T Consensus 141 --------------~g~v~~S~D--gG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~--~~~ 202 (327)
T 2xbg_A 141 --------------VGAIYRTKD--SGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH--NRT 202 (327)
T ss_dssp --------------TCCEEEESS--TTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE--ECC
T ss_pred --------------CccEEEEcC--CCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC--CCC
Confidence 4433 2222 222 22223445667899999999887776654444444442 222332 134
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc-C---CCceeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP-G---MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~-~---~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
....+..+.+.+++..+ .++.+|.+++++...++.-.... + .+..+.++....+ ..+..+..++.+..-.
T Consensus 203 ~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~g~~g~i~~S~ 276 (327)
T 2xbg_A 203 TSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTP-----NEVWLAGGAGALLCSQ 276 (327)
T ss_dssp SSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSS-----SCEEEEESTTCEEEES
T ss_pred CCCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCC-----CEEEEEeCCCeEEEeC
Confidence 55678899999988765 45567888877433222211111 0 1112222221111 0122222355554333
Q ss_pred CCCcceeeecC----CcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 238 RKMEPLCNIHE----NTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 238 ~~~~~~~~~~~----~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
..+..+..+.. ...+.++.|++++. ++.++++|.+.-++
T Consensus 277 DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 277 DGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp STTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred CCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 34444444431 35677888876555 44444555555444
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=1.2 Score=49.78 Aligned_cols=146 Identities=9% Similarity=-0.031 Sum_probs=93.8
Q ss_pred CeEEEEeCCCcEEEEECccCccccccc-ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCC
Q psy9327 22 PWILSSLHNGVIQLWDYRMNTLLEKFD-EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDD 100 (641)
Q Consensus 22 ~~Lasg~~dg~I~iWD~~~~~~l~~~~-~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~D 100 (641)
.+|+.+ ..+.|+..|+.+......+. ..-..+.+|+|++.+..+..+. ..+
T Consensus 7 ~~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD---------------------------~~~ 58 (628)
T 4a0p_A 7 AFLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTD---------------------------ISL 58 (628)
T ss_dssp CEEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEE---------------------------TTT
T ss_pred cEEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEE---------------------------CCC
Confidence 355554 45679999987654322221 1234678999999777666665 278
Q ss_pred CeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEE
Q psy9327 101 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVV 179 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lv 179 (641)
+.|+.+++........+........++++.+.+. +.++-...+.|.+.++........+.......+.++++|....|+
T Consensus 59 ~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY 138 (628)
T 4a0p_A 59 KTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMY 138 (628)
T ss_dssp TEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEE
T ss_pred CeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEE
Confidence 8999999876544444443345677899987655 555666678999999875443323334556688999999655555
Q ss_pred EEeC--CCeEEEEecCCC
Q psy9327 180 SASL--DQTIRVWDISGL 195 (641)
Q Consensus 180 Sgs~--DgtI~IWD~~~~ 195 (641)
.+.. .+.|...++...
T Consensus 139 ~tD~g~~~~I~r~~~dG~ 156 (628)
T 4a0p_A 139 WTEWGGKPKIDRAAMDGS 156 (628)
T ss_dssp EEECSSSCEEEEEETTSC
T ss_pred EeCCCCCCEEEEEeCCCC
Confidence 4442 456766666543
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.72 Score=47.44 Aligned_cols=142 Identities=15% Similarity=0.145 Sum_probs=82.3
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc--cccc---cccccCeEEEEEeCC---CCEEEEeceeeEEeeecee
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL--LEKF---DEHEGPVRGICFHNQ---QPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~--l~~~---~~h~~~V~~i~fsp~---~~~l~sgs~~~~~~~~~~~ 81 (641)
..-.+++|.|+|.++ ++..+|.|.+++ .++. +..+ ........+|+|+|+ +..|.++..
T Consensus 31 ~~P~~ia~~pdG~l~-V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~---------- 97 (352)
T 2ism_A 31 EVPWALAFLPDGGML-IAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRT---------- 97 (352)
T ss_dssp SCEEEEEECTTSCEE-EEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEE----------
T ss_pred CCceEEEEcCCCeEE-EEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEe----------
Confidence 456799999999854 455679999998 3431 1111 122456789999998 555555531
Q ss_pred eecccCCcceeeEEEeeCC-----CeEEEEECCCC-----eeE-EEEc---cCCCCeEEEEEccCCCEEEEEeCC-----
Q psy9327 82 LESRNEPCLFRIKSVLGDD-----YKIKVWNYKQR-----KCI-FTLL---GHLDYIRTTFFHHEYPWILSASDD----- 142 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~D-----g~I~vWD~~t~-----~~~-~~~~---~h~~~V~~v~fsp~~~~l~sgs~D----- 142 (641)
.. ..|..|+...+ +.+ ..+. +.......++|.|+|.+.++.++.
T Consensus 98 -----------------~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~ 160 (352)
T 2ism_A 98 -----------------VAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYEREL 160 (352)
T ss_dssp -----------------ECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGG
T ss_pred -----------------cCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCcc
Confidence 11 56777776643 112 2233 111123689999999877765432
Q ss_pred --------CeEEEEECCC--------------CeeEEEEccCCCCEEEEEEec-CCCEEEEEeC
Q psy9327 143 --------QTIRIWYWQS--------------RNCICVLTGHNHYVMCAQFHP-TDDIVVSASL 183 (641)
Q Consensus 143 --------g~I~vWd~~~--------------~~~i~~l~~h~~~V~sl~fsp-~g~~lvSgs~ 183 (641)
++|.-+|... ...+.. .+|. ....++|+| ++.+.++-..
T Consensus 161 ~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a-~G~r-np~g~a~d~~~g~l~v~d~g 222 (352)
T 2ism_A 161 AQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYS-LGHR-NPQGLAWHPKTGELFSSEHG 222 (352)
T ss_dssp GGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEE-ECCS-EECCCEECTTTCCEEEEEEC
T ss_pred ccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEE-EcCC-CcccEEEECCCCCEEEEEcC
Confidence 4666666542 011111 2332 356789999 6666555433
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0074 Score=68.84 Aligned_cols=136 Identities=4% Similarity=-0.123 Sum_probs=78.6
Q ss_pred CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC
Q psy9327 30 NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK 109 (641)
Q Consensus 30 dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~ 109 (641)
.+.|+..++...+....... ...+.+++|++.+..|..+. ...+.|+.+++.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD---------------------------~~~~~I~~~~~~ 436 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSD---------------------------LSQRMICSTQLD 436 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECC---------------------------TTTTSBEEEESC
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEe---------------------------cCCCeEEEEecC
Confidence 35788888776654433332 34567899999877777765 267889999987
Q ss_pred C----CeeEEEEccCCCCeEEEEEccC-CCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEe-C
Q psy9327 110 Q----RKCIFTLLGHLDYIRTTFFHHE-YPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSAS-L 183 (641)
Q Consensus 110 t----~~~~~~~~~h~~~V~~v~fsp~-~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs-~ 183 (641)
. ......+........++++.+. +.++++-...+.|.+.+.........+.........++++|.+.+|+.+. .
T Consensus 437 g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~ 516 (699)
T 1n7d_A 437 RAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWG 516 (699)
T ss_dssp CCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCS
T ss_pred CCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccC
Confidence 5 2222222222234567888854 45555556678899999875543333333334567788888654443332 2
Q ss_pred C-CeEEEEecC
Q psy9327 184 D-QTIRVWDIS 193 (641)
Q Consensus 184 D-gtI~IWD~~ 193 (641)
. +.|.++++.
T Consensus 517 ~~~~I~~~~~d 527 (699)
T 1n7d_A 517 TPAKIKKGGLN 527 (699)
T ss_dssp SSCCEEBCCSS
T ss_pred CCCeEEEEeCC
Confidence 2 455555443
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.091 Score=56.03 Aligned_cols=115 Identities=7% Similarity=0.057 Sum_probs=73.5
Q ss_pred CCCCeEEEEEccCCCeEEEEeC-CC---cEEEEECccCccc--ccccccccCeEEEEEeC-CCCEEEEeceeeEEeeece
Q psy9327 8 KSARVKGLSFHPKRPWILSSLH-NG---VIQLWDYRMNTLL--EKFDEHEGPVRGICFHN-QQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~-dg---~I~iWD~~~~~~l--~~~~~h~~~V~~i~fsp-~~~~l~sgs~~~~~~~~~~ 80 (641)
......+++|+++|++|+.+.. ++ ...+|....+... ..+. ......+++++| ++.++++-.
T Consensus 177 ~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~---------- 245 (430)
T 3tc9_A 177 GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELT-KGQNCNGAETHPINGELYFNSW---------- 245 (430)
T ss_dssp CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEET----------
T ss_pred CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeec-cCCCceEEEEeCCCCEEEEEEC----------
Confidence 3456789999999996665554 22 1233333344332 2222 223457889999 666655554
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc-cCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECC
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL-GHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQ 151 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~-~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~ 151 (641)
.++.|..+|..++.....+. +.....+.++|+|+++ ++++-...+.|..++..
T Consensus 246 ------------------~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 246 ------------------NAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp ------------------TTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ------------------CCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 67899999998776422222 1224568999999999 55566678899998765
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=96.61 E-value=0.012 Score=67.12 Aligned_cols=158 Identities=10% Similarity=-0.040 Sum_probs=94.4
Q ss_pred CCeEEEEEccCCCeEEEEe-CCCcEEEEECcc----CcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 10 ARVKGLSFHPKRPWILSSL-HNGVIQLWDYRM----NTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~-~dg~I~iWD~~~----~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
..+.+++|++.+..|+.+. ..+.|+.+++.. ......+........+|++.+.+..|..+.
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD-------------- 471 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD-------------- 471 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECC--------------
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEe--------------
Confidence 3466889998776666554 468899999865 222222222223346788876544444443
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEe-CC-CeEEEEECCCCeeEEEEccC
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS-DD-QTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs-~D-g~I~vWd~~~~~~i~~l~~h 162 (641)
...+.|.+.+.........+.......++++++|.+.+|+.+. .. +.|.+.++............
T Consensus 472 -------------~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~ 538 (699)
T 1n7d_A 472 -------------SVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN 538 (699)
T ss_dssp -------------TTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSS
T ss_pred -------------ccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCC
Confidence 2678899999875543333333345567899999655444333 23 67888776533221122223
Q ss_pred CCCEEEEEEecCCC-EEEEEeCCCeEEEEecCC
Q psy9327 163 NHYVMCAQFHPTDD-IVVSASLDQTIRVWDISG 194 (641)
Q Consensus 163 ~~~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~ 194 (641)
......|+|+|++. +.++-+..+.|.++|+.+
T Consensus 539 l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 539 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred CCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 34567899998754 555555677898888865
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=96.51 E-value=0.89 Score=50.76 Aligned_cols=145 Identities=9% Similarity=-0.011 Sum_probs=86.9
Q ss_pred CeEEEEeCCCcEEEEECccCc-ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCC
Q psy9327 22 PWILSSLHNGVIQLWDYRMNT-LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDD 100 (641)
Q Consensus 22 ~~Lasg~~dg~I~iWD~~~~~-~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~D 100 (641)
++|+-+. ...|+..|+.... ........-..+.+++|++.+..+..+. ...
T Consensus 10 ~~~~~~~-~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD---------------------------~~~ 61 (619)
T 3s94_A 10 PLLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSD---------------------------VSE 61 (619)
T ss_dssp CCEEEEC-SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEE---------------------------TTT
T ss_pred ceEEEec-cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEE---------------------------CCC
Confidence 4444443 4678888887543 1222223345678999999777777665 267
Q ss_pred CeEEEEECCCCee-EEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEE
Q psy9327 101 YKIKVWNYKQRKC-IFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIV 178 (641)
Q Consensus 101 g~I~vWD~~t~~~-~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~l 178 (641)
+.|+.+++..... ...+........++++.+.+. ++++-...+.|.+.+.........+.........++++|.+..|
T Consensus 62 ~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~l 141 (619)
T 3s94_A 62 EAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFM 141 (619)
T ss_dssp TEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEE
T ss_pred CeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeE
Confidence 8999999876532 333444446788999999544 55666678899999987654333333455667889999975555
Q ss_pred EEEeC--CCeEEEEecCC
Q psy9327 179 VSASL--DQTIRVWDISG 194 (641)
Q Consensus 179 vSgs~--DgtI~IWD~~~ 194 (641)
+.+.. .+.|...++.+
T Consensus 142 y~tD~g~~~~I~r~~~dG 159 (619)
T 3s94_A 142 YWTDWGEVPKIERAGMDG 159 (619)
T ss_dssp EEEECSSSCEEEEEETTS
T ss_pred EEeccCCCCEEEEEECCC
Confidence 44432 34555555543
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=96.45 E-value=0.2 Score=51.43 Aligned_cols=154 Identities=12% Similarity=0.143 Sum_probs=101.1
Q ss_pred CCeEEEEEccCC----C---eEEEEe-C--CCcEEEEECc--cCcccccccc------cc-cCeEEEEE--eCC-CC-EE
Q psy9327 10 ARVKGLSFHPKR----P---WILSSL-H--NGVIQLWDYR--MNTLLEKFDE------HE-GPVRGICF--HNQ-QP-IF 66 (641)
Q Consensus 10 ~~V~~l~fspdg----~---~Lasg~-~--dg~I~iWD~~--~~~~l~~~~~------h~-~~V~~i~f--sp~-~~-~l 66 (641)
++++.+..-|+- . +++++. . +++|.+|++. +++ +..+.. .. ..+.++++ +|. +. ++
T Consensus 68 g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~ya 146 (355)
T 3amr_A 68 GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYA 146 (355)
T ss_dssp SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEE
T ss_pred CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEE
Confidence 567777777632 1 233333 3 5789999773 343 443311 11 45677888 664 44 45
Q ss_pred EEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC-------CCeeEEEEccCCCCeEEEEEccCCCEEEEE
Q psy9327 67 VSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK-------QRKCIFTLLGHLDYIRTTFFHHEYPWILSA 139 (641)
Q Consensus 67 ~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~-------t~~~~~~~~~h~~~V~~v~fsp~~~~l~sg 139 (641)
++.. .+|.+..|++. +.+.+++|.. .+.+..|...+....|+.+
T Consensus 147 fV~~----------------------------k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~ 197 (355)
T 3amr_A 147 MVTG----------------------------KEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIA 197 (355)
T ss_dssp EEEC----------------------------SSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEE
T ss_pred EEEC----------------------------CCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEe
Confidence 5555 78999999882 3466777764 4578899999988899999
Q ss_pred eCCCeEEEEECC-----CCeeEEEEc-cCC-CCEEEEEEe--cCCC-EEEEEe-CCCeEEEEecC
Q psy9327 140 SDDQTIRIWYWQ-----SRNCICVLT-GHN-HYVMCAQFH--PTDD-IVVSAS-LDQTIRVWDIS 193 (641)
Q Consensus 140 s~Dg~I~vWd~~-----~~~~i~~l~-~h~-~~V~sl~fs--p~g~-~lvSgs-~DgtI~IWD~~ 193 (641)
-.|..|..++.+ +++.+..+. +|. ..+..+++- +++. +|+++| .+.+..+||.+
T Consensus 198 eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 198 EEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp ETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred cccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 999877777754 355665552 332 368888874 5555 555555 67899999996
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=96.33 E-value=0.2 Score=56.33 Aligned_cols=97 Identities=7% Similarity=-0.011 Sum_probs=64.4
Q ss_pred eEEEEECCCCee--EEEEc-cCCCCeEEEEEccCCCEEEEEe-CCCeEEEEECCCCeeEEEEccCCCC-EEEEEEecCCC
Q psy9327 102 KIKVWNYKQRKC--IFTLL-GHLDYIRTTFFHHEYPWILSAS-DDQTIRIWYWQSRNCICVLTGHNHY-VMCAQFHPTDD 176 (641)
Q Consensus 102 ~I~vWD~~t~~~--~~~~~-~h~~~V~~v~fsp~~~~l~sgs-~Dg~I~vWd~~~~~~i~~l~~h~~~-V~sl~fsp~g~ 176 (641)
.+.+||..+++. +..+. .+.....++++..++.+++.|+ .+..+.+||..+.+....-.-+... -.+++..+++.
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~ 299 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR 299 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCe
Confidence 588999988753 22332 2333445678889999999998 4568999999877543221111111 13456667899
Q ss_pred EEEEEe-CC-----CeEEEEecCCCcee
Q psy9327 177 IVVSAS-LD-----QTIRVWDISGLRKK 198 (641)
Q Consensus 177 ~lvSgs-~D-----gtI~IWD~~~~~~~ 198 (641)
+++.|+ .+ ..+.+||..+.+-.
T Consensus 300 iyv~GG~~~~~~~~~~~e~yd~~t~~W~ 327 (656)
T 1k3i_A 300 VFTIGGSWSGGVFEKNGEVYSPSSKTWT 327 (656)
T ss_dssp EEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred EEEEeCcccCCcccccceEeCCCCCcce
Confidence 999988 44 57999999876543
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=96.31 E-value=0.25 Score=51.91 Aligned_cols=141 Identities=14% Similarity=0.123 Sum_probs=88.8
Q ss_pred cCCCeEEEEeCCCcEEEEECccCccccccccc----ccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeE
Q psy9327 19 PKRPWILSSLHNGVIQLWDYRMNTLLEKFDEH----EGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIK 94 (641)
Q Consensus 19 pdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h----~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~ 94 (641)
.+|.-++.+- ++.||.-++..+...+.+... ...|..+..+|+|.+++..+
T Consensus 30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g------------------------ 84 (452)
T 3pbp_A 30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN------------------------ 84 (452)
T ss_dssp TTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC------------------------
T ss_pred cCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec------------------------
Confidence 3455455443 467777777644333333222 23578899999999999986
Q ss_pred EEeeCCCeEEEEECCCCe------------eEEEEcc------CCCCeEEEEEcc---CCCEEEEEeCCCeEEEEECCCC
Q psy9327 95 SVLGDDYKIKVWNYKQRK------------CIFTLLG------HLDYIRTTFFHH---EYPWILSASDDQTIRIWYWQSR 153 (641)
Q Consensus 95 ~~~s~Dg~I~vWD~~t~~------------~~~~~~~------h~~~V~~v~fsp---~~~~l~sgs~Dg~I~vWd~~~~ 153 (641)
+..|.|-.+..+. ..+.+.- ...+|..+.||| .+..|++-..|++|++||+...
T Consensus 85 -----~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s 159 (452)
T 3pbp_A 85 -----DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNS 159 (452)
T ss_dssp -----SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCT
T ss_pred -----CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccC
Confidence 4455555544211 0112211 357899999999 4568999999999999999752
Q ss_pred --eeEEEEc---------cCCCCEEEEEEecCCCEEEEEe--CCCeEEEE
Q psy9327 154 --NCICVLT---------GHNHYVMCAQFHPTDDIVVSAS--LDQTIRVW 190 (641)
Q Consensus 154 --~~i~~l~---------~h~~~V~sl~fsp~g~~lvSgs--~DgtI~IW 190 (641)
++. .++ .+...|.+++|.+++-.|...+ .+|-|.-.
T Consensus 160 ~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 160 QEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp TSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred CCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 222 332 2335688999998776555544 66766544
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=96.18 E-value=0.45 Score=57.24 Aligned_cols=285 Identities=11% Similarity=0.095 Sum_probs=170.7
Q ss_pred EEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEE
Q psy9327 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKS 95 (641)
Q Consensus 16 ~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (641)
-.||..+.+|.-. ..+++|+|+++...+..+.- ..+|.--.|-....+-+++
T Consensus 72 IMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~~l~lVT-------------------------- 123 (1630)
T 1xi4_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTVALVT-------------------------- 123 (1630)
T ss_pred ccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCCeeEEEc--------------------------
Confidence 3677777666554 57899999988877776643 4567667776555443333
Q ss_pred EeeCCCeEEEEECCC-CeeEEEEccC----CCCeEEEEEccCCCEEEEEe-------CCCeEEEEECCCCeeEEEEccCC
Q psy9327 96 VLGDDYKIKVWNYKQ-RKCIFTLLGH----LDYIRTTFFHHEYPWILSAS-------DDQTIRIWYWQSRNCICVLTGHN 163 (641)
Q Consensus 96 ~~s~Dg~I~vWD~~t-~~~~~~~~~h----~~~V~~v~fsp~~~~l~sgs-------~Dg~I~vWd~~~~~~i~~l~~h~ 163 (641)
+..|..|++.. ..+...|..| ...|..-..+++++|++..| -.|.+.+|....+ ..+.+.||.
T Consensus 124 ----~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha 198 (1630)
T 1xi4_A 124 ----DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHA 198 (1630)
T ss_pred ----CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhH
Confidence 56799999964 3565666655 34677778889999987544 3578889987644 344566776
Q ss_pred CCEEEEEEe--cCCC-EEEEEeC---CCeEEEEecCCC-ceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEe
Q psy9327 164 HYVMCAQFH--PTDD-IVVSASL---DQTIRVWDISGL-RKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236 (641)
Q Consensus 164 ~~V~sl~fs--p~g~-~lvSgs~---DgtI~IWD~~~~-~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~ 236 (641)
+...++... +... .+.-+.. .+.++|-++... ..- +++.+
T Consensus 199 ~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~---~~f~k------------------------------ 245 (1630)
T 1xi4_A 199 ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN---QPFPK------------------------------ 245 (1630)
T ss_pred hhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCC---CCCcc------------------------------
Confidence 554333332 1112 2222222 256777776432 000 10000
Q ss_pred cCCCcceeeec--CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe----ccccceEEEEE--cCcEEEEEeCCCC
Q psy9327 237 NRKMEPLCNIH--ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR----TLDLPIYITKI--KGNQVYYLDRECS 308 (641)
Q Consensus 237 d~~~~~~~~~~--~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~----~~d~p~~~~~~--~g~~v~~~~~dg~ 308 (641)
+...+..-+ ...-..++..++.-..++..+..|-+.+++.++|+.- +-..|++.... ...-+++..+.|.
T Consensus 246 --k~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~ 323 (1630)
T 1xi4_A 246 --KAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQ 323 (1630)
T ss_pred --ccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCce
Confidence 000000000 1223334666666666777778888888888887643 33444554332 3456788889999
Q ss_pred eEEEEeCCcchhhhHHHhccchHHHHHHHhcCcccc---chHHHHHHHHhcCCccchhhhhhh
Q psy9327 309 PHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVG---EVGERIKILKSCGQTSLAYLTAAT 368 (641)
Q Consensus 309 i~v~~~~~~~~~~k~~l~~~~~~~~l~~~~~s~l~~---D~~~r~~~l~~~g~~~la~~~a~~ 368 (641)
+....++....+--..-.-.+.+-.+.+....++-| =..++++.+...|++.-|-..|..
T Consensus 324 vl~v~v~~~~iv~yi~~~l~~~~la~~~a~r~~lpGad~l~~~~F~~l~~~g~y~~AA~~aa~ 386 (1630)
T 1xi4_A 324 VLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGAEELFARKFNALFAQGNYSEAAKVAAN 386 (1630)
T ss_pred EEEEEEccchhhhhHhhccCCHHHHHHHHHhcCCCCchhHHHHHHHHHHHcCCHHHHHHHHHh
Confidence 999999987766333222244456677777777777 455667778888887766665544
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.47 Score=48.30 Aligned_cols=114 Identities=10% Similarity=0.073 Sum_probs=77.6
Q ss_pred eEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEE-Ecc----CCC--CeEE
Q psy9327 54 VRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT-LLG----HLD--YIRT 126 (641)
Q Consensus 54 V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~-~~~----h~~--~V~~ 126 (641)
-.+++|++.+..|..++ ...++|..||...+..... +.+ ..+ .+.+
T Consensus 15 PE~~~wd~~~g~~~vs~---------------------------l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sG 67 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSN---------------------------LYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSG 67 (334)
T ss_dssp CSCEEEETTTTEEEEEE---------------------------TTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEE
T ss_pred CcCccCcCCCCEEEEEe---------------------------ccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeE
Confidence 34688998666666665 3799999999986644333 322 111 3679
Q ss_pred EEE---ccCCCEEEEEe-------------CCCeEEEEECC---CCeeEEEEc--cC-----------CCCEEEEEEecC
Q psy9327 127 TFF---HHEYPWILSAS-------------DDQTIRIWYWQ---SRNCICVLT--GH-----------NHYVMCAQFHPT 174 (641)
Q Consensus 127 v~f---sp~~~~l~sgs-------------~Dg~I~vWd~~---~~~~i~~l~--~h-----------~~~V~sl~fsp~ 174 (641)
+.| .|++.++++.. .+..+..+|+. +++.+.... +. ......++..++
T Consensus 68 l~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~ 147 (334)
T 2p9w_A 68 LSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRD 147 (334)
T ss_dssp EEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTT
T ss_pred EEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCC
Confidence 999 68877777543 26789999998 776554432 11 134788999999
Q ss_pred CCEEEEEeCC-CeEEEEecCC
Q psy9327 175 DDIVVSASLD-QTIRVWDISG 194 (641)
Q Consensus 175 g~~lvSgs~D-gtI~IWD~~~ 194 (641)
|+..++++.. +.|...|...
T Consensus 148 GnaYVt~s~~~~~I~rV~pdG 168 (334)
T 2p9w_A 148 GNSYVAFALGMPAIARVSADG 168 (334)
T ss_dssp SCEEEEEEESSCEEEEECTTS
T ss_pred CCEEEeCCCCCCeEEEEeCCC
Confidence 9999998877 7766555543
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=96.08 E-value=0.27 Score=51.73 Aligned_cols=95 Identities=20% Similarity=0.128 Sum_probs=67.8
Q ss_pred CCCeEEEEECCCCeeEEEEccC----CCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe------------eEEEEcc-
Q psy9327 99 DDYKIKVWNYKQRKCIFTLLGH----LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN------------CICVLTG- 161 (641)
Q Consensus 99 ~Dg~I~vWD~~t~~~~~~~~~h----~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~------------~i~~l~~- 161 (641)
.++.||.-++..+..-+.+... -+.|..+..+|+|.++|..+ +..|.|-.+..+. ..+.+.-
T Consensus 39 ~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~ 117 (452)
T 3pbp_A 39 QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSID 117 (452)
T ss_dssp ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGG
T ss_pred ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcC
Confidence 5678888887754433444322 23578899999999888886 4578888776321 1223321
Q ss_pred -----CCCCEEEEEEecC---CCEEEEEeCCCeEEEEecCC
Q psy9327 162 -----HNHYVMCAQFHPT---DDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 162 -----h~~~V~sl~fsp~---g~~lvSgs~DgtI~IWD~~~ 194 (641)
...+|..+.|||- +..|++-..|++||+||+..
T Consensus 118 ~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 118 EEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp GCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred CcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 3567999999994 57899999999999999986
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=96.02 E-value=0.31 Score=50.05 Aligned_cols=142 Identities=7% Similarity=0.120 Sum_probs=97.2
Q ss_pred CCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCC----C---EEEEeceeeEEeeeceeeecccCCccee
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ----P---IFVSGGKMIVMAYQGCILESRNEPCLFR 92 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~----~---~l~sgs~~~~~~~~~~~~~~~~~~~~~~ 92 (641)
...+++.....+-+.+||+ +|+.+..+.. +.++.+..-|+- . +++++.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~---------------------- 93 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASN---------------------- 93 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEE----------------------
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeC----------------------
Confidence 3456777777888999999 7888887743 678888887732 1 222322
Q ss_pred eEEEeeC--CCeEEEEEC--CCCeeEEEEcc------CC-CCeEEEEE--ccC-CC-EEEEEeCCCeEEEEECC------
Q psy9327 93 IKSVLGD--DYKIKVWNY--KQRKCIFTLLG------HL-DYIRTTFF--HHE-YP-WILSASDDQTIRIWYWQ------ 151 (641)
Q Consensus 93 ~~~~~s~--Dg~I~vWD~--~t~~~~~~~~~------h~-~~V~~v~f--sp~-~~-~l~sgs~Dg~I~vWd~~------ 151 (641)
-. +++|.+|++ .+++ +..+.. .. ..+.++|+ +|. +. +++....++.+..|++.
T Consensus 94 -----R~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~ 167 (355)
T 3amr_A 94 -----RSEGKNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGY 167 (355)
T ss_dssp -----CSTTCCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSC
T ss_pred -----CCCCCCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCc
Confidence 24 689999976 4443 444421 11 45667777 664 44 67778888999999882
Q ss_pred -CCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecC
Q psy9327 152 -SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193 (641)
Q Consensus 152 -~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~ 193 (641)
+.+.+++|.- .+.+-.+...+....|+.+-+|.-|..+|..
T Consensus 168 ~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 168 ISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp EEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred ccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeCC
Confidence 3356677763 4578888899988999999998665555543
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=96.02 E-value=2.6 Score=46.97 Aligned_cols=157 Identities=10% Similarity=-0.010 Sum_probs=100.9
Q ss_pred CCeEEEEEccCCCeEEEEe-CCCcEEEEECccCcccccccc------cccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 10 ARVKGLSFHPKRPWILSSL-HNGVIQLWDYRMNTLLEKFDE------HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~-~dg~I~iWD~~~~~~l~~~~~------h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
..+.+++|++.+..|..+. ..+.|+.++.........+.. ....+.++++...+..|..+.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td------------ 407 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTC------------ 407 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEE------------
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEc------------
Confidence 4578899999766666554 467898888654322222221 234688999998766655544
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE-ccCCCCeEEEEEcc-CCCEEEEEeCCC--eEEEEECCCCeeEEE
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL-LGHLDYIRTTFFHH-EYPWILSASDDQ--TIRIWYWQSRNCICV 158 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~-~~h~~~V~~v~fsp-~~~~l~sgs~Dg--~I~vWd~~~~~~i~~ 158 (641)
+..+.|.+.+.. |+...++ .......++++++| .+.++++-.... .|...++........
T Consensus 408 ---------------~~~~~I~v~~~~-G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l 471 (628)
T 4a0p_A 408 ---------------EATNVINVTRLD-GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVL 471 (628)
T ss_dssp ---------------TTTTEEEEEETT-SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEE
T ss_pred ---------------CCCCEEEEEECC-CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEE
Confidence 277889999986 4444343 34556789999999 555555543333 576667653333222
Q ss_pred EccCCCCEEEEEEecCCCEEEEEe-CCCeEEEEecCC
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDISG 194 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~ 194 (641)
........+.+++.+++..|..+. ..+.|...|+.+
T Consensus 472 ~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG 508 (628)
T 4a0p_A 472 FFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSG 508 (628)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCC
Confidence 333455678999999877666554 457888888855
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=95.93 E-value=0.23 Score=53.72 Aligned_cols=158 Identities=14% Similarity=0.156 Sum_probs=98.0
Q ss_pred eEEEEEccC-CCeEEEEeCCCcEEEEECc-------cCcc-----------ccc-cc-ccccCeEEEEEeCCCCEEEEec
Q psy9327 12 VKGLSFHPK-RPWILSSLHNGVIQLWDYR-------MNTL-----------LEK-FD-EHEGPVRGICFHNQQPIFVSGG 70 (641)
Q Consensus 12 V~~l~fspd-g~~Lasg~~dg~I~iWD~~-------~~~~-----------l~~-~~-~h~~~V~~i~fsp~~~~l~sgs 70 (641)
..+++++|+ +.++++-..++.|..+|.. +++. ... +. .....-.+|+|+|++..|..+.
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD 328 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGV 328 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEe
Confidence 457889995 5555566678889999987 4543 111 11 1223458999999999666654
Q ss_pred eeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEEC--CCCee--EEEEccC---C------------CCeE-EEEEc
Q psy9327 71 KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNY--KQRKC--IFTLLGH---L------------DYIR-TTFFH 130 (641)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~--~t~~~--~~~~~~h---~------------~~V~-~v~fs 130 (641)
+..+.|+.+|+ .++.. ..++-+. . .... .++..
T Consensus 329 ---------------------------~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd 381 (496)
T 3kya_A 329 ---------------------------INNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVK 381 (496)
T ss_dssp ---------------------------TTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEE
T ss_pred ---------------------------CCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEc
Confidence 26788888654 33332 1222221 1 1234 45554
Q ss_pred -------cCCCEEEEEeCCCeEEEEECCCCeeEEEEccC------------------------CCCEEEEEEecC-CCEE
Q psy9327 131 -------HEYPWILSASDDQTIRIWYWQSRNCICVLTGH------------------------NHYVMCAQFHPT-DDIV 178 (641)
Q Consensus 131 -------p~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h------------------------~~~V~sl~fsp~-g~~l 178 (641)
+++.++++-.....|+.++ .++. +.++-|. ......+++.++ +.++
T Consensus 382 ~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~ly 459 (496)
T 3kya_A 382 NPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFY 459 (496)
T ss_dssp CTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEE
T ss_pred cccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEE
Confidence 4566777777788999998 4553 4444322 124678899986 6666
Q ss_pred EEEeCCCeEEEEecCCCcee
Q psy9327 179 VSASLDQTIRVWDISGLRKK 198 (641)
Q Consensus 179 vSgs~DgtI~IWD~~~~~~~ 198 (641)
++=+....||.+++....+.
T Consensus 460 VaD~~N~rIrki~~~~~~~~ 479 (496)
T 3kya_A 460 VHDQVGHTIRTISMEQEENV 479 (496)
T ss_dssp EEETTTTEEEEEEECCCC--
T ss_pred EEeCCCCEEEEEECCCCccc
Confidence 66666788998888764443
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=95.86 E-value=0.45 Score=49.15 Aligned_cols=156 Identities=14% Similarity=0.159 Sum_probs=96.4
Q ss_pred CeEEEEEccCCCeEEEEe------------CCCcEEEEECccCc-cccc-------ccccccCeEEEEEeC--CCC-EEE
Q psy9327 11 RVKGLSFHPKRPWILSSL------------HNGVIQLWDYRMNT-LLEK-------FDEHEGPVRGICFHN--QQP-IFV 67 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~------------~dg~I~iWD~~~~~-~l~~-------~~~h~~~V~~i~fsp--~~~-~l~ 67 (641)
..-.++..|+|..+++++ .+|.|.++|..+.. .... +........+|.+.+ ++. +|.
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 345667788886555552 68999999987321 1112 222345788888877 343 444
Q ss_pred EeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC----eeEEEEccC-CCCeEEEEEccCCCEEEEEeC-
Q psy9327 68 SGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR----KCIFTLLGH-LDYIRTTFFHHEYPWILSASD- 141 (641)
Q Consensus 68 sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~----~~~~~~~~h-~~~V~~v~fsp~~~~l~sgs~- 141 (641)
++.. ...+.+|.+|++..+ ..+.++.+. ....+++++.++|.+.++...
T Consensus 131 Vvnh-------------------------~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ 185 (355)
T 3sre_A 131 VVNH-------------------------PGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHY 185 (355)
T ss_dssp EEEC-------------------------STTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCS
T ss_pred EEEC-------------------------CCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcE
Confidence 4431 013578888877643 234445442 235789999999987777541
Q ss_pred ----------------CCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEe-CCCeEEEEecCC
Q psy9327 142 ----------------DQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDISG 194 (641)
Q Consensus 142 ----------------Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~ 194 (641)
.+.|.-+|. +++. .+...-...+.++|+||++.++.+. ..+.|..||+..
T Consensus 186 ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~-~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 186 FIDPYLKSWEMHLGLAWSFVTYYSP--NDVR-VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp CSSHHHHHHHHHTTCCCEEEEEECT--TCCE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred eCCcccccchhhccCCccEEEEEEC--CeEE-EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 245555554 3322 2323345678999999998766554 578999999863
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=95.43 E-value=0.36 Score=49.89 Aligned_cols=144 Identities=13% Similarity=0.105 Sum_probs=81.0
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCc-ccccc---cccccCeEEEEEeCC---CCEEEEeceeeEEeeeceee
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT-LLEKF---DEHEGPVRGICFHNQ---QPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~-~l~~~---~~h~~~V~~i~fsp~---~~~l~sgs~~~~~~~~~~~~ 82 (641)
....+++|.|+|. |+++..+|.|+++| ..++ .+..+ ........+|+|+|+ +..|.++....
T Consensus 29 ~~P~~ia~~pdG~-l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~--------- 97 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYF--------- 97 (354)
T ss_dssp SCEEEEEEEETTE-EEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEE---------
T ss_pred CCCeEEEEcCCCe-EEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEecc---------
Confidence 4578999999998 55556679999997 4454 22211 122356889999997 55555543000
Q ss_pred ecccCCcceeeEEEeeCC----CeEEEEECCCC-------eeE-EEEcc-CCCCeEEEEEccCCCEEEEEeCC-------
Q psy9327 83 ESRNEPCLFRIKSVLGDD----YKIKVWNYKQR-------KCI-FTLLG-HLDYIRTTFFHHEYPWILSASDD------- 142 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~D----g~I~vWD~~t~-------~~~-~~~~~-h~~~V~~v~fsp~~~~l~sgs~D------- 142 (641)
..+ ..|..|+...+ +.+ ..+.. .......++|.|+|.+.++.++.
T Consensus 98 ---------------~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~ 162 (354)
T 3a9g_A 98 ---------------AEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQ 162 (354)
T ss_dssp ---------------CGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGT
T ss_pred ---------------CCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCcccc
Confidence 012 45666665543 111 11221 11124679999999877775432
Q ss_pred ------CeEEEEECCCC---------eeEEEEccCCCCEEEEEEec-CCCEEEEE
Q psy9327 143 ------QTIRIWYWQSR---------NCICVLTGHNHYVMCAQFHP-TDDIVVSA 181 (641)
Q Consensus 143 ------g~I~vWd~~~~---------~~i~~l~~h~~~V~sl~fsp-~g~~lvSg 181 (641)
++|.-+|.... ..+.. .+|.. ...++|+| ++.+.++-
T Consensus 163 d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a-~G~rn-p~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 163 DLSSLAGKILRVDEEGRPPADNPFPNSPIWS-YGHRN-PQGIDWHRASGVMVATE 215 (354)
T ss_dssp CTTCCSSEEEEECTTSCCCTTSSSTTCCEEE-ECCSC-CCEEEECTTTCCEEEEE
T ss_pred CCCCCCeEEEEEcCCCCCCCCCCCCCCcEEE-EccCC-cceEEEeCCCCCEEEEe
Confidence 45666655321 11221 23433 45789999 56655553
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=95.36 E-value=0.35 Score=46.23 Aligned_cols=139 Identities=12% Similarity=-0.046 Sum_probs=81.5
Q ss_pred CeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCe--------EEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPV--------RGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V--------~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
.++.++|||+|.+.++ .+|.+.--+..+.+...-+ +....| .++.|.|++.+.++ +
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~-~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~------------ 105 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWM-GRAKKIGNGGWNQFQFLFFDPNGYLYAV-S------------ 105 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHH-HHCEEEECSCGGGCSEEEECTTSCEEEE-E------------
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCccccc-ccccEecccccccceEEEECCCCCEEEe-C------------
Confidence 6779999999986666 6776555554332221111 112333 78999999998887 4
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCee-------EEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe-
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC-------IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN- 154 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~-------~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~- 154 (641)
||.|.-++-.+... ...-.+-=..+..+.|.|+|.+.+.. |+.++-+...+..
T Consensus 106 -----------------dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~ 166 (236)
T 1tl2_A 106 -----------------KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQ 166 (236)
T ss_dssp -----------------TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTT
T ss_pred -----------------CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCC
Confidence 48888777533111 11111112467899999999877666 7775443332211
Q ss_pred -----eEEEE-ccCCCCEEEEEEecCCCEEEEEeCCCe
Q psy9327 155 -----CICVL-TGHNHYVMCAQFHPTDDIVVSASLDQT 186 (641)
Q Consensus 155 -----~i~~l-~~h~~~V~sl~fsp~g~~lvSgs~Dgt 186 (641)
....+ .+.-+.-+.+.|.|++.+.+.. ++.
T Consensus 167 ~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~ 202 (236)
T 1tl2_A 167 DNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGK 202 (236)
T ss_dssp CCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred cccccccceeccCCcceEEEEEECCCCcEEEEe--CCe
Confidence 01111 1333345567788888776655 663
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=95.13 E-value=0.83 Score=46.97 Aligned_cols=146 Identities=15% Similarity=0.118 Sum_probs=83.7
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc--ccc----ccccccCeEEEEEeCC---CCEEEEeceeeEEeee
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL--LEK----FDEHEGPVRGICFHNQ---QPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~--l~~----~~~h~~~V~~i~fsp~---~~~l~sgs~~~~~~~~ 78 (641)
.-..-.+|+|.|+|.++++--..|.|++++...++. +.. +....+...+|+|+|+ +.+|...-.
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt------- 102 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT------- 102 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE-------
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEe-------
Confidence 345678999999999776665589999998655542 211 1233567899999995 444443210
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCC----------CeeEE-EEcc-CCCCeEEEEEccCCCEEEEEeC-----
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ----------RKCIF-TLLG-HLDYIRTTFFHHEYPWILSASD----- 141 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t----------~~~~~-~~~~-h~~~V~~v~fsp~~~~l~sgs~----- 141 (641)
...+..|.-|.+.. .+.+. .+.. ....-..++|.|+|.+.++.++
T Consensus 103 ------------------~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~ 164 (347)
T 3das_A 103 ------------------SASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTG 164 (347)
T ss_dssp ------------------CSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGG
T ss_pred ------------------cCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCc
Confidence 00334555555543 12222 2221 1123457999999998887653
Q ss_pred --------CCeEEEEECCCC---------eeEEEEccCCCCEEEEEEecCCCEEEE
Q psy9327 142 --------DQTIRIWYWQSR---------NCICVLTGHNHYVMCAQFHPTDDIVVS 180 (641)
Q Consensus 142 --------Dg~I~vWd~~~~---------~~i~~l~~h~~~V~sl~fsp~g~~lvS 180 (641)
.++|.-.+.... ..+. -.||.. ...++|+|+|.+.++
T Consensus 165 ~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~-a~G~RN-p~Gla~dp~G~L~~~ 218 (347)
T 3das_A 165 LSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVY-SYGHRN-VQGLAWDDKQRLFAS 218 (347)
T ss_dssp GTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEE-EBCCSB-CCEEEECTTCCEEEE
T ss_pred cccCCCCCCCEEEEEeCCCCccCCCCCCCCeEE-eeCCCC-cceEEECCCCCEEEE
Confidence 345554554322 1121 135543 457899998776554
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=95.07 E-value=0.38 Score=49.63 Aligned_cols=59 Identities=17% Similarity=0.279 Sum_probs=38.6
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc---cccc----cccccCeEEEEEeCC---CCEEEEe
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL---LEKF----DEHEGPVRGICFHNQ---QPIFVSG 69 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~---l~~~----~~h~~~V~~i~fsp~---~~~l~sg 69 (641)
....+|+|.|+|+.++++...|.|++++.. ++. +..+ ....+...+|+|+|+ +.+|..+
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEE
Confidence 456899999999844555668999999853 332 1111 122346789999996 5555544
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=95.04 E-value=0.96 Score=48.38 Aligned_cols=62 Identities=18% Similarity=0.274 Sum_probs=39.9
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc--cccccc------cccCeEEEEEeCC---CCEEEEec
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL--LEKFDE------HEGPVRGICFHNQ---QPIFVSGG 70 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~--l~~~~~------h~~~V~~i~fsp~---~~~l~sgs 70 (641)
-....+|+|.|+|+++++-...+.|++++..+++. +..+.. ..+...+|+|+|+ +.+|..+.
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 34567999999998666654445788887654432 222221 2456789999996 55555543
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.52 E-value=2.8 Score=41.29 Aligned_cols=94 Identities=7% Similarity=-0.032 Sum_probs=51.3
Q ss_pred CeEEEEECCCCe---eEEE--EccCCCCeEEEEEccCCCEEEEEeCC-----CeEEEEECCCCeeEE--EEccCCCCEEE
Q psy9327 101 YKIKVWNYKQRK---CIFT--LLGHLDYIRTTFFHHEYPWILSASDD-----QTIRIWYWQSRNCIC--VLTGHNHYVMC 168 (641)
Q Consensus 101 g~I~vWD~~t~~---~~~~--~~~h~~~V~~v~fsp~~~~l~sgs~D-----g~I~vWd~~~~~~i~--~l~~h~~~V~s 168 (641)
..+.+||..+++ .... +.........+.+ ++.+++.|+.+ ..+.+||..+.+-.. .+......-.+
T Consensus 78 ~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 155 (301)
T 2vpj_A 78 SSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGL 155 (301)
T ss_dssp CCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEE
T ss_pred ceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceE
Confidence 468899988765 3322 2211122222222 56677777654 368899988775332 22211111122
Q ss_pred EEEecCCCEEEEEeCC-----CeEEEEecCCCcee
Q psy9327 169 AQFHPTDDIVVSASLD-----QTIRVWDISGLRKK 198 (641)
Q Consensus 169 l~fsp~g~~lvSgs~D-----gtI~IWD~~~~~~~ 198 (641)
+. .++.+++.|+.+ ..+.+||..+.+-.
T Consensus 156 ~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~ 188 (301)
T 2vpj_A 156 VV--ASGVIYCLGGYDGLNILNSVEKYDPHTGHWT 188 (301)
T ss_dssp EE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEE
T ss_pred EE--ECCEEEEECCCCCCcccceEEEEeCCCCcEE
Confidence 22 267777777654 46888998776543
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=93.45 E-value=7.7 Score=39.65 Aligned_cols=101 Identities=12% Similarity=0.045 Sum_probs=63.0
Q ss_pred cCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe-eEEEEc---cCCCCeEEE
Q psy9327 52 GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK-CIFTLL---GHLDYIRTT 127 (641)
Q Consensus 52 ~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~-~~~~~~---~h~~~V~~v 127 (641)
....+++|.|++.++++- .++.|+++| .+++ .+..+. .......++
T Consensus 29 ~~P~~ia~~pdG~l~V~e-----------------------------~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gi 78 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTE-----------------------------RPGRLVLIS-PSGKKLVASFDVANVGEAGLLGL 78 (354)
T ss_dssp SCEEEEEEEETTEEEEEE-----------------------------TTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEE
T ss_pred CCCeEEEEcCCCeEEEEe-----------------------------CCCEEEEEe-CCCceEeeccceeecCCCceeeE
Confidence 345789999999866665 569999997 4555 222221 223568899
Q ss_pred EEccC---CCEE-EEEeC---C----CeEEEEECCCC-------eeE-EEEc-cCCCCEEEEEEecCCCEEEEEe
Q psy9327 128 FFHHE---YPWI-LSASD---D----QTIRIWYWQSR-------NCI-CVLT-GHNHYVMCAQFHPTDDIVVSAS 182 (641)
Q Consensus 128 ~fsp~---~~~l-~sgs~---D----g~I~vWd~~~~-------~~i-~~l~-~h~~~V~sl~fsp~g~~lvSgs 182 (641)
+|+|+ +..| ++-+. + ..|..|+.... +.+ ..+. +..+....+.|.|+|.+.++.+
T Consensus 79 a~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 79 ALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 99997 4444 44332 3 56777876654 112 1122 1223456799999998777754
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.30 E-value=6.8 Score=38.58 Aligned_cols=148 Identities=9% Similarity=-0.027 Sum_probs=76.2
Q ss_pred CCeEEEEeC--CCcEEEEECccCcc--cccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEE
Q psy9327 21 RPWILSSLH--NGVIQLWDYRMNTL--LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSV 96 (641)
Q Consensus 21 g~~Lasg~~--dg~I~iWD~~~~~~--l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (641)
+.+++.|+. ...+.+||..+++- +..+......-..+. -++..++.||..
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~------------------------ 65 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQ------------------------ 65 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBS------------------------
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCC------------------------
Confidence 345666765 35688899876542 211211111111122 255666676610
Q ss_pred eeCCCeEEEEECCCCeeEEEEc--cCCCCeEEEEEccCCCEEEEEeCC------CeEEEEECCCCeeEEE--EccCCCCE
Q psy9327 97 LGDDYKIKVWNYKQRKCIFTLL--GHLDYIRTTFFHHEYPWILSASDD------QTIRIWYWQSRNCICV--LTGHNHYV 166 (641)
Q Consensus 97 ~s~Dg~I~vWD~~t~~~~~~~~--~h~~~V~~v~fsp~~~~l~sgs~D------g~I~vWd~~~~~~i~~--l~~h~~~V 166 (641)
...-..+.+||..+++....-. ........+.+ ++.+++.|+.+ ..+.+||..+.+-... +......-
T Consensus 66 ~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~ 143 (306)
T 3ii7_A 66 LFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSH 143 (306)
T ss_dssp SSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSC
T ss_pred CCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCccee
Confidence 0123578899998876543322 11112222222 66777777765 4689999988763322 11111111
Q ss_pred EEEEEecCCCEEEEEeC---------CCeEEEEecCCCcee
Q psy9327 167 MCAQFHPTDDIVVSASL---------DQTIRVWDISGLRKK 198 (641)
Q Consensus 167 ~sl~fsp~g~~lvSgs~---------DgtI~IWD~~~~~~~ 198 (641)
.++. .++.+++.|+. -..+.+||..+.+-.
T Consensus 144 ~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~ 182 (306)
T 3ii7_A 144 GMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWT 182 (306)
T ss_dssp EEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEE
T ss_pred EEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEE
Confidence 2222 25666666654 345888998876543
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=93.07 E-value=0.75 Score=47.48 Aligned_cols=120 Identities=11% Similarity=0.013 Sum_probs=76.4
Q ss_pred eeeccC-CCCeEEEEEccCCCeEEEEeC---C------------CcEEEEECccCcccccccccccCeEEEEEeCCCCEE
Q psy9327 3 TKFETK-SARVKGLSFHPKRPWILSSLH---N------------GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIF 66 (641)
Q Consensus 3 ~~~~~H-~~~V~~l~fspdg~~Lasg~~---d------------g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l 66 (641)
.++++. -.+.+.+.+.++|.+.++... | ..=.+|-+..++ +......-..-++|+|+||++.+
T Consensus 157 ~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~-~~~~~~~l~~pNGia~spDg~~l 235 (355)
T 3sre_A 157 KTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND-VRVVAEGFDFANGINISPDGKYV 235 (355)
T ss_dssp EEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTC-CEEEEEEESSEEEEEECTTSSEE
T ss_pred eccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCe-EEEeecCCcccCcceECCCCCEE
Confidence 344433 256889999999987776642 1 123344443342 33333334567999999999988
Q ss_pred EEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC-Cee--EEEEccCCCCeEEEEEcc-CCCEEEEEeCC
Q psy9327 67 VSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ-RKC--IFTLLGHLDYIRTTFFHH-EYPWILSASDD 142 (641)
Q Consensus 67 ~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t-~~~--~~~~~~h~~~V~~v~fsp-~~~~l~sgs~D 142 (641)
..+. +..+.|..||+.. ++. ...+ ...+..-.+++.+ +|.+.+++..+
T Consensus 236 Yvad---------------------------t~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 236 YIAE---------------------------LLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEE---------------------------GGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred EEEe---------------------------CCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 8876 4678999999863 332 2334 2346678899999 59987777644
Q ss_pred -CeEEEEECC
Q psy9327 143 -QTIRIWYWQ 151 (641)
Q Consensus 143 -g~I~vWd~~ 151 (641)
+.|..||..
T Consensus 288 g~~v~~~~P~ 297 (355)
T 3sre_A 288 GMRIFFYDAE 297 (355)
T ss_dssp HHHHHSCCTT
T ss_pred ceEEEEECCC
Confidence 355555544
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=92.92 E-value=1.7 Score=44.53 Aligned_cols=99 Identities=9% Similarity=0.081 Sum_probs=62.7
Q ss_pred CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee--EEEEc---cCCCCeEEE
Q psy9327 53 PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLL---GHLDYIRTT 127 (641)
Q Consensus 53 ~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~--~~~~~---~h~~~V~~v 127 (641)
.-.+++|.|++.++++- .++.|.+++ +++. +..+. .......++
T Consensus 32 ~P~~ia~~pdG~l~V~e-----------------------------~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gi 80 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAE-----------------------------RPGRIRLFR--EGRLSTYAELSVYHRGESGLLGL 80 (352)
T ss_dssp CEEEEEECTTSCEEEEE-----------------------------TTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEE
T ss_pred CceEEEEcCCCeEEEEe-----------------------------CCCeEEEEE--CCCccEeecceEeecCCCCceeE
Confidence 45789999999966664 568999998 4542 22221 224568899
Q ss_pred EEccC---CCEEE-EEeCC-----CeEEEEECCCC-----eeE-EEEc---cCCCCEEEEEEecCCCEEEEEe
Q psy9327 128 FFHHE---YPWIL-SASDD-----QTIRIWYWQSR-----NCI-CVLT---GHNHYVMCAQFHPTDDIVVSAS 182 (641)
Q Consensus 128 ~fsp~---~~~l~-sgs~D-----g~I~vWd~~~~-----~~i-~~l~---~h~~~V~sl~fsp~g~~lvSgs 182 (641)
+|+|+ +..|. +-..+ ..|..|+.... +.+ ..+. +..+....++|.|+|.+.++.+
T Consensus 81 a~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 81 ALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 99998 44444 43332 67888887643 122 2233 2223446899999998777654
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.59 E-value=1.1 Score=44.28 Aligned_cols=92 Identities=10% Similarity=0.049 Sum_probs=50.5
Q ss_pred CeEEEEECCCCeeEEEE--ccCCCCeEEEEEccCCCEEEEEeCC-----CeEEEEECCCCeeEEEE--ccCCCCEEEEEE
Q psy9327 101 YKIKVWNYKQRKCIFTL--LGHLDYIRTTFFHHEYPWILSASDD-----QTIRIWYWQSRNCICVL--TGHNHYVMCAQF 171 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~--~~h~~~V~~v~fsp~~~~l~sgs~D-----g~I~vWd~~~~~~i~~l--~~h~~~V~sl~f 171 (641)
..+.+||..+.+....- ........++. -++.+++.|+.+ ..+.+||..+.+-...- ........++.+
T Consensus 175 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 252 (301)
T 2vpj_A 175 NSVEKYDPHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL 252 (301)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred ceEEEEeCCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE
Confidence 46889999887654331 11111122222 256677777764 46899999887643221 111111122222
Q ss_pred ecCCCEEEEEeCC-----CeEEEEecCCCc
Q psy9327 172 HPTDDIVVSASLD-----QTIRVWDISGLR 196 (641)
Q Consensus 172 sp~g~~lvSgs~D-----gtI~IWD~~~~~ 196 (641)
++.+++.|+.+ ..+.+||..+.+
T Consensus 253 --~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 253 --RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp --TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred --CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 56677777665 357788877644
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.07 E-value=8.1 Score=37.90 Aligned_cols=94 Identities=6% Similarity=0.032 Sum_probs=50.1
Q ss_pred CeEEEEECCCCeeEEEE--ccCCCCeEEEEEccCCCEEEEEeCCC-----eEEEEECCCCeeEEE--EccCCCCEEEEEE
Q psy9327 101 YKIKVWNYKQRKCIFTL--LGHLDYIRTTFFHHEYPWILSASDDQ-----TIRIWYWQSRNCICV--LTGHNHYVMCAQF 171 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~--~~h~~~V~~v~fsp~~~~l~sgs~Dg-----~I~vWd~~~~~~i~~--l~~h~~~V~sl~f 171 (641)
..+.+||..+.+....- .........+.+ ++.+++.|+.++ .+.+||..+.+-... +........++.
T Consensus 77 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~- 153 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV- 153 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-
T ss_pred cceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-
Confidence 45889998887643321 111112222222 566777777553 588899887753322 111111112222
Q ss_pred ecCCCEEEEEeCC-------CeEEEEecCCCcee
Q psy9327 172 HPTDDIVVSASLD-------QTIRVWDISGLRKK 198 (641)
Q Consensus 172 sp~g~~lvSgs~D-------gtI~IWD~~~~~~~ 198 (641)
-++.+++.|+.+ ..+.+||..+.+-.
T Consensus 154 -~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~ 186 (302)
T 2xn4_A 154 -VGGLLYAVGGYDVASRQCLSTVECYNATTNEWT 186 (302)
T ss_dssp -ETTEEEEECCEETTTTEECCCEEEEETTTTEEE
T ss_pred -ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE
Confidence 256666666542 35888998776543
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.92 E-value=1.4 Score=43.74 Aligned_cols=92 Identities=5% Similarity=0.044 Sum_probs=51.0
Q ss_pred CeEEEEECCCCeeEEE--EccCCCCeEEEEEccCCCEEEEEeCC-----CeEEEEECCCCeeEEEEccCC---CCEEEEE
Q psy9327 101 YKIKVWNYKQRKCIFT--LLGHLDYIRTTFFHHEYPWILSASDD-----QTIRIWYWQSRNCICVLTGHN---HYVMCAQ 170 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~--~~~h~~~V~~v~fsp~~~~l~sgs~D-----g~I~vWd~~~~~~i~~l~~h~---~~V~sl~ 170 (641)
..+.+||..+.+.... +.........+.+ ++.+++.|+.+ ..+.+||..+.+-.. +.... .....+.
T Consensus 173 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~r~~~~~~~ 249 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ-VADMNMCRRNAGVCA 249 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEE
T ss_pred cEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEee-CCCCCCccccCeEEE
Confidence 4588999988764432 1111112222222 56777777764 368999998775332 22111 1111222
Q ss_pred EecCCCEEEEEeCCC-----eEEEEecCCCce
Q psy9327 171 FHPTDDIVVSASLDQ-----TIRVWDISGLRK 197 (641)
Q Consensus 171 fsp~g~~lvSgs~Dg-----tI~IWD~~~~~~ 197 (641)
.++.+++.|+.++ .+.+||..+.+-
T Consensus 250 --~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 250 --VNGLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp --ETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred --ECCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 2567777777653 478888876543
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=91.67 E-value=8.4 Score=46.15 Aligned_cols=142 Identities=12% Similarity=0.188 Sum_probs=88.2
Q ss_pred CCeEEEEe----------CCCcEEEEECccCcccccc-cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 21 RPWILSSL----------HNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 21 g~~Lasg~----------~dg~I~iWD~~~~~~l~~~-~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
..++++|. ..|.|.++++..+++.... ....++|++++-- +| +|++|
T Consensus 844 ~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g-~Lla~-------------------- 901 (1158)
T 3ei3_A 844 NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NG-KLLAS-------------------- 901 (1158)
T ss_dssp CCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TT-EEEEE--------------------
T ss_pred CEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CC-EEEEE--------------------
Confidence 46888886 3588999998744321111 1356888887743 34 55555
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC--CCeeEEEE-ccCCCCE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ--SRNCICVL-TGHNHYV 166 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~--~~~~i~~l-~~h~~~V 166 (641)
-..+|++|++...+.+..-..+-..|..+.....+++++.|..-..|.+..++ .++....- .-+...+
T Consensus 902 ---------ig~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~v 972 (1158)
T 3ei3_A 902 ---------INSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 972 (1158)
T ss_dssp ---------ETTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCE
T ss_pred ---------cCCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccE
Confidence 36789999998765443111111123333343457788888887777775543 34332222 2355678
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 167 MCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 167 ~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
+++.|-.+ ..++.+..+|.+.+.....
T Consensus 973 ta~~~ld~-~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 973 SAVEILDD-DNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEEEEET-TEEEEEETTSEEEEEEECT
T ss_pred EEEEEEcc-CcEEEEcCCCcEEEEecCC
Confidence 88888754 4677789999999887654
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=90.34 E-value=0.61 Score=44.59 Aligned_cols=132 Identities=10% Similarity=-0.018 Sum_probs=75.2
Q ss_pred CCCeEEEEeCCCcEEEEECccCcccccc------ccc--ccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcce
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNTLLEKF------DEH--EGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLF 91 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~~l~~~------~~h--~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~ 91 (641)
...+|++...| +|+.=....+.. ..+ .++ =..++.++|||++.+.++ .
T Consensus 3 ~~~~l~~v~~d-~~y~G~~P~~~~-~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV-~--------------------- 58 (236)
T 1tl2_A 3 GESMLRGVYQD-KFYQGTYPQNKN-DNWLARATLIGKGGWSNFKFLFLSPGGELYGV-L--------------------- 58 (236)
T ss_dssp CCCCEEEEETT-EEEEESCCCSTT-CCHHHHSEEEESSSCTTCSEEEECTTSCEEEE-E---------------------
T ss_pred cceEEEEEeCC-cEEecCCCCCcc-cchhhhccccCccccccceeEEECCCccEEEE-e---------------------
Confidence 34566666666 555444333331 111 112 136779999999997776 4
Q ss_pred eeEEEeeCCCeEEEEECCCCee------EEEE-c-cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE------
Q psy9327 92 RIKSVLGDDYKIKVWNYKQRKC------IFTL-L-GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC------ 157 (641)
Q Consensus 92 ~~~~~~s~Dg~I~vWD~~t~~~------~~~~-~-~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~------ 157 (641)
+|.+.-.+..+... -..+ . +..+ -.++.|.|++.+.++ .||.|+-++-.+.....
T Consensus 59 --------~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~ 127 (236)
T 1tl2_A 59 --------NDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARAT 127 (236)
T ss_dssp --------TTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSE
T ss_pred --------CCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceecccc
Confidence 44544444433111 0111 0 1112 478999999987777 55999888764322111
Q ss_pred -EEccCCCCEEEEEEecCCCEEEEEeCCCeEE
Q psy9327 158 -VLTGHNHYVMCAQFHPTDDIVVSASLDQTIR 188 (641)
Q Consensus 158 -~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~ 188 (641)
.-.+-=..+..+.|.|+|.+.+.. |+.+.
T Consensus 128 ~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 128 EVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp EEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred EeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 111111457899999999988776 77743
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=90.04 E-value=1.4 Score=45.00 Aligned_cols=144 Identities=12% Similarity=0.020 Sum_probs=86.2
Q ss_pred CeEEEEeCCCcEEEEECccCccccccccc-ccCeEEEEEe--CCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEee
Q psy9327 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEH-EGPVRGICFH--NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLG 98 (641)
Q Consensus 22 ~~Lasg~~dg~I~iWD~~~~~~l~~~~~h-~~~V~~i~fs--p~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s 98 (641)
..++.++.||.|.-.|..+|+.+.+++.. ..++....-. +.+..++.+. .+
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~--------------------------p~ 64 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIE--------------------------PF 64 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEEC--------------------------CS
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEE--------------------------EC
Confidence 46889999999999999999998888654 1232221100 0111222221 02
Q ss_pred CCCeEEEEECCCCeeEEEEcc----CCCCeEE----EEEc----cCCCEEEEEeCCCeEEEEECCCCeeEEEEccCC--C
Q psy9327 99 DDYKIKVWNYKQRKCIFTLLG----HLDYIRT----TFFH----HEYPWILSASDDQTIRIWYWQSRNCICVLTGHN--H 164 (641)
Q Consensus 99 ~Dg~I~vWD~~t~~~~~~~~~----h~~~V~~----v~fs----p~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~--~ 164 (641)
.||.+..+|..+|.....+.. ...++.. +... ..+..+++|+.++.+.-.|.++|+.+..+.... +
T Consensus 65 ~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~ 144 (339)
T 2be1_A 65 GDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNG 144 (339)
T ss_dssp TTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC
T ss_pred CCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcc
Confidence 799999999998866554432 2233332 0000 145578899999999999999999998886321 1
Q ss_pred C-----EEEEEEe-----cCCCEEEEEeCCCeEEEEe
Q psy9327 165 Y-----VMCAQFH-----PTDDIVVSASLDQTIRVWD 191 (641)
Q Consensus 165 ~-----V~sl~fs-----p~g~~lvSgs~DgtI~IWD 191 (641)
. ..|.... -.+..++.++.+..+.+.+
T Consensus 145 ~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~ 181 (339)
T 2be1_A 145 YFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS 181 (339)
T ss_dssp --------------------CCEEEEEEEEEECEECC
T ss_pred cccccccccccccccccccCCCeEEEecceEEEEEEC
Confidence 1 1111110 1245677777777777766
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.01 E-value=2.2 Score=42.53 Aligned_cols=94 Identities=9% Similarity=0.055 Sum_probs=50.1
Q ss_pred CeEEEEECCCCeeEEE--EccCCCCeEEEEEccCCCEEEEEeCCC-----eEEEEECCCCeeEEEE--ccCCCCEEEEEE
Q psy9327 101 YKIKVWNYKQRKCIFT--LLGHLDYIRTTFFHHEYPWILSASDDQ-----TIRIWYWQSRNCICVL--TGHNHYVMCAQF 171 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~--~~~h~~~V~~v~fsp~~~~l~sgs~Dg-----~I~vWd~~~~~~i~~l--~~h~~~V~sl~f 171 (641)
..+.+||..+.+.... +........++. -++.+++.|+.++ .+.+||..+.+-...- .........+.+
T Consensus 165 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 242 (315)
T 4asc_A 165 NKMCVYDPKKFEWKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL 242 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred ceEEEEeCCCCeEEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE
Confidence 4688999888754332 111111122222 2567777777654 5889999877533221 111111122222
Q ss_pred ecCCCEEEEEeCCC--------------eEEEEecCCCcee
Q psy9327 172 HPTDDIVVSASLDQ--------------TIRVWDISGLRKK 198 (641)
Q Consensus 172 sp~g~~lvSgs~Dg--------------tI~IWD~~~~~~~ 198 (641)
++.+++.|+.++ .+.+||..+.+-.
T Consensus 243 --~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 281 (315)
T 4asc_A 243 --VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWE 281 (315)
T ss_dssp --TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEE
T ss_pred --CCEEEEECCccccCcCCccccccccCcEEEecCCCChhh
Confidence 567777776532 3677888765443
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=90.00 E-value=38 Score=40.48 Aligned_cols=86 Identities=15% Similarity=0.129 Sum_probs=50.1
Q ss_pred CCeeEEEecC---CCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEeccccceE------EEEEcCcE
Q psy9327 229 PKHTLHICNR---KMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLPIY------ITKIKGNQ 299 (641)
Q Consensus 229 ~d~~I~i~d~---~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~p~~------~~~~~g~~ 299 (641)
..|.|.+++- +++.+......+++.+++-- +|..++..+....++-|.. ++.++ .+...+ .....+++
T Consensus 862 ~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g~Lla~ig~~l~vy~l~~-~~~L~-~~~~~~~~i~~~~l~~~~~~ 938 (1158)
T 3ei3_A 862 KQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NGKLLASINSTVRLYEWTT-EKELR-TECNHYNNIMALYLKTKGDF 938 (1158)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TTEEEEEETTEEEEEEECT-TSCEE-EEEEECCCSCEEEEEEETTE
T ss_pred CceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CCEEEEEcCCEEEEEECCC-CceEE-EEeeccccEEEEEEeccCCE
Confidence 5688888883 23333333336778877643 3566666655555554533 33444 222111 23456889
Q ss_pred EEEEeCCCCeEEEEeCCc
Q psy9327 300 VYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 300 v~~~~~dg~i~v~~~~~~ 317 (641)
++.++--..+..+..+..
T Consensus 939 I~vgD~~~Sv~~~~y~~~ 956 (1158)
T 3ei3_A 939 ILVGDLMRSVLLLAYKPM 956 (1158)
T ss_dssp EEEEESSBCEEEEEEETT
T ss_pred EEEEEhhheEEEEEEEcC
Confidence 999998888888776654
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.43 E-value=2.6 Score=41.69 Aligned_cols=149 Identities=7% Similarity=-0.001 Sum_probs=73.3
Q ss_pred CCCeEEEEeCC----CcEEEEECccCccc--ccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceee
Q psy9327 20 KRPWILSSLHN----GVIQLWDYRMNTLL--EKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRI 93 (641)
Q Consensus 20 dg~~Lasg~~d----g~I~iWD~~~~~~l--~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~ 93 (641)
++.+++.|+.+ ..+.+||..+++-. ..+......-..+. -++..++.||...
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~-------------------- 112 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACA--AEGKIYTSGGSEV-------------------- 112 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEE--ETTEEEEECCBBT--------------------
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEE--ECCEEEEECCCCC--------------------
Confidence 56677777754 56888887765421 11111111111112 2566666666100
Q ss_pred EEEeeCCCeEEEEECCCCeeEEEEc--cCCCCeEEEEEccCCCEEEEEeC---------CCeEEEEECCCCeeEEEEccC
Q psy9327 94 KSVLGDDYKIKVWNYKQRKCIFTLL--GHLDYIRTTFFHHEYPWILSASD---------DQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 94 ~~~~s~Dg~I~vWD~~t~~~~~~~~--~h~~~V~~v~fsp~~~~l~sgs~---------Dg~I~vWd~~~~~~i~~l~~h 162 (641)
.......+.+||..+.+....-. .......++. -++.+++.|+. -..+.+||..+.+-. .+...
T Consensus 113 --~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~-~~~~~ 187 (306)
T 3ii7_A 113 --GNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWT-ELCPM 187 (306)
T ss_dssp --TBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEE-EECCC
T ss_pred --CCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEE-ECCCc
Confidence 00012468899998876443211 1111122222 25666677654 345889999887532 22211
Q ss_pred CC-C-EEEEEEecCCCEEEEEeCC-----CeEEEEecCCCc
Q psy9327 163 NH-Y-VMCAQFHPTDDIVVSASLD-----QTIRVWDISGLR 196 (641)
Q Consensus 163 ~~-~-V~sl~fsp~g~~lvSgs~D-----gtI~IWD~~~~~ 196 (641)
.. . -.+++.. ++.+++.|+.+ ..+.+||..+.+
T Consensus 188 p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 188 IEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp SSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred cchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 11 1 1122222 56666666653 357777776643
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=89.18 E-value=17 Score=35.80 Aligned_cols=155 Identities=9% Similarity=0.026 Sum_probs=76.8
Q ss_pred ccCCCeEEEEeCC----CcEEEEECccCccc--ccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcce
Q psy9327 18 HPKRPWILSSLHN----GVIQLWDYRMNTLL--EKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLF 91 (641)
Q Consensus 18 spdg~~Lasg~~d----g~I~iWD~~~~~~l--~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~ 91 (641)
.-++.+++.||.+ ..+.+||..+++-. ..+......- +++. -++..++.||.... +
T Consensus 22 ~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~-------------~--- 83 (308)
T 1zgk_A 22 KVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-AGCV-VGGLLYAVGGRNNS-------------P--- 83 (308)
T ss_dssp CCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCEEEE-------------T---
T ss_pred CCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-eEEE-ECCEEEEECCCcCC-------------C---
Confidence 3356777778742 46888888765421 1111111111 1222 25666677761000 0
Q ss_pred eeEEEeeCCCeEEEEECCCCeeEEE--EccCCCCeEEEEEccCCCEEEEEeCC-----CeEEEEECCCCeeEEE--EccC
Q psy9327 92 RIKSVLGDDYKIKVWNYKQRKCIFT--LLGHLDYIRTTFFHHEYPWILSASDD-----QTIRIWYWQSRNCICV--LTGH 162 (641)
Q Consensus 92 ~~~~~~s~Dg~I~vWD~~t~~~~~~--~~~h~~~V~~v~fsp~~~~l~sgs~D-----g~I~vWd~~~~~~i~~--l~~h 162 (641)
........+.+||..+.+.... +.........+.+ ++.+++.|+.+ ..+.+||..+.+-... +...
T Consensus 84 ---~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 158 (308)
T 1zgk_A 84 ---DGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTR 158 (308)
T ss_dssp ---TEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSC
T ss_pred ---CCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcc
Confidence 0001234688899887764332 1111112222222 56677777643 4688899887653221 1111
Q ss_pred CCCEEEEEEecCCCEEEEEeCC-----CeEEEEecCCCce
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLD-----QTIRVWDISGLRK 197 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~D-----gtI~IWD~~~~~~ 197 (641)
...-.++.+ ++.+++.|+.+ ..+.+||..+.+-
T Consensus 159 r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 196 (308)
T 1zgk_A 159 RIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEW 196 (308)
T ss_dssp CBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEE
T ss_pred ccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeE
Confidence 111122222 56777777654 4588899877554
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=88.61 E-value=6.6 Score=40.19 Aligned_cols=105 Identities=11% Similarity=0.073 Sum_probs=66.7
Q ss_pred cCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee--EEEE----ccCCCCeE
Q psy9327 52 GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTL----LGHLDYIR 125 (641)
Q Consensus 52 ~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~--~~~~----~~h~~~V~ 125 (641)
..-.+|+|.|++.++++-- ..|.|++++..+++. +..+ ....+...
T Consensus 32 ~~P~~ia~~pdG~llVter----------------------------~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~Gll 83 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSR----------------------------DEATITRVDAKTGRKTELGEVPGVSPSGEGGLL 83 (347)
T ss_dssp SSEEEEEECTTSCEEEEET----------------------------TTCEEEEECTTTCCEEEEEECTTCCCBTTBSEE
T ss_pred CCceEEEEcCCCcEEEEEe----------------------------cCCEEEEEECCCCcEeeecccCceeecCCCCce
Confidence 4567999999999887763 489999998766653 2222 12356788
Q ss_pred EEEEccC---CCEEEEE---eCCCeEEEEECCC----------CeeEE-EEc-cCCCCEEEEEEecCCCEEEEEeCC
Q psy9327 126 TTFFHHE---YPWILSA---SDDQTIRIWYWQS----------RNCIC-VLT-GHNHYVMCAQFHPTDDIVVSASLD 184 (641)
Q Consensus 126 ~v~fsp~---~~~l~sg---s~Dg~I~vWd~~~----------~~~i~-~l~-~h~~~V~sl~fsp~g~~lvSgs~D 184 (641)
+++|+|+ +.+|... ..+..|.-|.+.. .+.+. .+. +..+.-..+.|.|+|.+.++.++.
T Consensus 84 Gia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~ 160 (347)
T 3das_A 84 GIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGES 160 (347)
T ss_dssp EEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCT
T ss_pred eeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCC
Confidence 9999995 3444332 2455666666544 12222 232 223345679999999888876543
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.30 E-value=6.1 Score=39.23 Aligned_cols=92 Identities=9% Similarity=0.009 Sum_probs=49.0
Q ss_pred CeEEEEECCCCeeEEE--EccCCCCeEEEEEccCCCEEEEEeC-C-----CeEEEEECCCCeeEEE--EccCCCCEEEEE
Q psy9327 101 YKIKVWNYKQRKCIFT--LLGHLDYIRTTFFHHEYPWILSASD-D-----QTIRIWYWQSRNCICV--LTGHNHYVMCAQ 170 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~--~~~h~~~V~~v~fsp~~~~l~sgs~-D-----g~I~vWd~~~~~~i~~--l~~h~~~V~sl~ 170 (641)
..+.+||..+++.... +........++ ..++.+++.|+. + ..+.+||..+.+-... +......-.++.
T Consensus 117 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 194 (315)
T 4asc_A 117 DSVMCYDRLSFKWGESDPLPYVVYGHTVL--SHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV 194 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEE--EETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE
T ss_pred ceEEEECCCCCcEeECCCCCCcccceeEE--EECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEE
Confidence 4688999988764322 11111111222 235667777776 2 4689999887653221 111111112222
Q ss_pred EecCCCEEEEEeCCC-----eEEEEecCCCc
Q psy9327 171 FHPTDDIVVSASLDQ-----TIRVWDISGLR 196 (641)
Q Consensus 171 fsp~g~~lvSgs~Dg-----tI~IWD~~~~~ 196 (641)
+ ++.+++.|+.++ .+.+||..+.+
T Consensus 195 ~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 195 H--DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp E--TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred E--CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 2 567777777654 47777877653
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=87.90 E-value=30 Score=36.52 Aligned_cols=162 Identities=9% Similarity=0.145 Sum_probs=107.8
Q ss_pred CCeEEEEEccCCCeEEEEeC-------CCcEEEEECccCcccccccccccCeEEEEEeCCC---CEEEEeceeeEEeeec
Q psy9327 10 ARVKGLSFHPKRPWILSSLH-------NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ---PIFVSGGKMIVMAYQG 79 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~-------dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~---~~l~sgs~~~~~~~~~ 79 (641)
..|..-..+++++|++..|- .|.+++|..+.+ .-..+++|.+.-..+...-+. ..++-+.+
T Consensus 151 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r-------- 221 (494)
T 1bpo_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVR-------- 221 (494)
T ss_dssp CEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEEC--------
T ss_pred ceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEe--------
Confidence 56777888999999875543 478899998755 335566775554333332111 12222221
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCC---------eeEEEEc---cCCCCeEEEEEccCCCEEEEEeCCCeEEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQR---------KCIFTLL---GHLDYIRTTFFHHEYPWILSASDDQTIRI 147 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~---------~~~~~~~---~h~~~V~~v~fsp~~~~l~sgs~Dg~I~v 147 (641)
....++++|-++... +.+..+- .-.+-.-++..++....+..-+.-|.|.+
T Consensus 222 -----------------~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~l 284 (494)
T 1bpo_A 222 -----------------GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHL 284 (494)
T ss_dssp -----------------STTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEE
T ss_pred -----------------cCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEE
Confidence 012368888887432 1122221 12455567899999899999999999999
Q ss_pred EECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce
Q psy9327 148 WYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 197 (641)
Q Consensus 148 Wd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~ 197 (641)
+|+.++.++..-+-..+.|...+-+.+..-++.....|.|.--.+.....
T Consensus 285 yDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 285 YDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (494)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTH
T ss_pred EecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccccc
Confidence 99999999988887788888777777777777777888877666665433
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=87.31 E-value=9.7 Score=40.45 Aligned_cols=104 Identities=15% Similarity=0.173 Sum_probs=63.9
Q ss_pred CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee--EEEEcc------CCCCe
Q psy9327 53 PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLG------HLDYI 124 (641)
Q Consensus 53 ~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~--~~~~~~------h~~~V 124 (641)
...+|+|.|+|+++++-. ..+.|.+++..+++. +..+.. ..+..
T Consensus 28 ~P~~~a~~pdG~l~V~e~----------------------------~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gl 79 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTER----------------------------ATGKILRVNPESGSVKTVFQVPEIVNDADGQNGL 79 (454)
T ss_dssp SEEEEEECTTSCEEEEET----------------------------TTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSE
T ss_pred CceEEEEcCCCcEEEEEc----------------------------CCCEEEEEECCCCcEeEEecCCccccccCCCCce
Confidence 456899999999888763 345788888665543 223321 24567
Q ss_pred EEEEEccC---CCEEE-EEeC------------CCeEEEEECCCC-------eeEE-EEc-cCCCCEEEEEEecCCCEEE
Q psy9327 125 RTTFFHHE---YPWIL-SASD------------DQTIRIWYWQSR-------NCIC-VLT-GHNHYVMCAQFHPTDDIVV 179 (641)
Q Consensus 125 ~~v~fsp~---~~~l~-sgs~------------Dg~I~vWd~~~~-------~~i~-~l~-~h~~~V~sl~fsp~g~~lv 179 (641)
.+++|+|+ +.+|. +-+. ...|.-|++... +.+. .+. +..+....+.|.|+|.+.+
T Consensus 80 lgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv 159 (454)
T 1cru_A 80 LGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYY 159 (454)
T ss_dssp EEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEE
T ss_pred eEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEE
Confidence 89999995 44444 4332 234555655321 1222 122 2235678999999998877
Q ss_pred EEeCC
Q psy9327 180 SASLD 184 (641)
Q Consensus 180 Sgs~D 184 (641)
+.+..
T Consensus 160 ~~Gd~ 164 (454)
T 1cru_A 160 TIGDQ 164 (454)
T ss_dssp EECCT
T ss_pred EECCC
Confidence 76543
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=86.98 E-value=3.7 Score=40.71 Aligned_cols=92 Identities=7% Similarity=0.029 Sum_probs=49.7
Q ss_pred CeEEEEECCCCeeEEE--EccCCCCeEEEEEccCCCEEEEEeCC-----CeEEEEECCCCeeEEE--EccCCCCEEEEEE
Q psy9327 101 YKIKVWNYKQRKCIFT--LLGHLDYIRTTFFHHEYPWILSASDD-----QTIRIWYWQSRNCICV--LTGHNHYVMCAQF 171 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~--~~~h~~~V~~v~fsp~~~~l~sgs~D-----g~I~vWd~~~~~~i~~--l~~h~~~V~sl~f 171 (641)
..+.+||..+.+.... +........++.+ ++.+++.|+.+ ..+.+||..+.+-... +.........+.+
T Consensus 184 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 261 (308)
T 1zgk_A 184 NSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH 261 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred ceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE
Confidence 4688999887764322 1111112222222 66777777765 5699999988753321 1111111122222
Q ss_pred ecCCCEEEEEeCC-----CeEEEEecCCCc
Q psy9327 172 HPTDDIVVSASLD-----QTIRVWDISGLR 196 (641)
Q Consensus 172 sp~g~~lvSgs~D-----gtI~IWD~~~~~ 196 (641)
++.+++.|+.+ ..+.+||..+.+
T Consensus 262 --~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 262 --QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp --TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred --CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 56677777654 357788877644
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=86.57 E-value=4.2 Score=40.52 Aligned_cols=95 Identities=4% Similarity=0.040 Sum_probs=48.6
Q ss_pred CeEEEEECCCCeeEEEE--ccCCCCeEEEEEccCCCEEEEEeCC-----CeEEEEECCCCeeEEE--EccCCCCEEEEEE
Q psy9327 101 YKIKVWNYKQRKCIFTL--LGHLDYIRTTFFHHEYPWILSASDD-----QTIRIWYWQSRNCICV--LTGHNHYVMCAQF 171 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~--~~h~~~V~~v~fsp~~~~l~sgs~D-----g~I~vWd~~~~~~i~~--l~~h~~~V~sl~f 171 (641)
..+.+||..+.+....- ........++. -++.+++.|+.+ ..+.+||..+.+-... +.........+.
T Consensus 175 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~- 251 (318)
T 2woz_A 175 NRVFIYNPKKGDWKDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVS- 251 (318)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEE-
T ss_pred ceEEEEcCCCCEEEECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEE-
Confidence 45899999887644321 11111122222 256677777643 3577899887653221 111111112222
Q ss_pred ecCCCEEEEEeCC--------------CeEEEEecCCCceee
Q psy9327 172 HPTDDIVVSASLD--------------QTIRVWDISGLRKKN 199 (641)
Q Consensus 172 sp~g~~lvSgs~D--------------gtI~IWD~~~~~~~~ 199 (641)
.++.+++.|+.+ ..+.+||..+.+-..
T Consensus 252 -~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 292 (318)
T 2woz_A 252 -LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAG 292 (318)
T ss_dssp -ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEE
T ss_pred -ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehh
Confidence 256666766653 346677776654433
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=85.21 E-value=13 Score=36.72 Aligned_cols=91 Identities=8% Similarity=0.016 Sum_probs=46.9
Q ss_pred eEEEEECCCCeeEEEE--ccCCCCeEEEEEccCCCEEEEEeC------CCeEEEEECCCCeeEEE--EccCCCCEEEEEE
Q psy9327 102 KIKVWNYKQRKCIFTL--LGHLDYIRTTFFHHEYPWILSASD------DQTIRIWYWQSRNCICV--LTGHNHYVMCAQF 171 (641)
Q Consensus 102 ~I~vWD~~t~~~~~~~--~~h~~~V~~v~fsp~~~~l~sgs~------Dg~I~vWd~~~~~~i~~--l~~h~~~V~sl~f 171 (641)
.+.+||..+.+....- ........ ++. .++.+++.|+. -..+.+||..+.+-... +........++.
T Consensus 128 ~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~- 204 (318)
T 2woz_A 128 SVLCYDPVAAKWSEVKNLPIKVYGHN-VIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI- 204 (318)
T ss_dssp EEEEEETTTTEEEEECCCSSCEESCE-EEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-
T ss_pred eEEEEeCCCCCEeECCCCCCcccccE-EEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE-
Confidence 5888898877644321 11111111 222 46667777764 23589999988753322 111111112222
Q ss_pred ecCCCEEEEEeCC-----CeEEEEecCCCc
Q psy9327 172 HPTDDIVVSASLD-----QTIRVWDISGLR 196 (641)
Q Consensus 172 sp~g~~lvSgs~D-----gtI~IWD~~~~~ 196 (641)
-++.+++.|+.+ ..+.+||..+.+
T Consensus 205 -~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 205 -HKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp -ETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred -ECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 256777777653 246677776643
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=84.43 E-value=58 Score=36.57 Aligned_cols=216 Identities=12% Similarity=0.068 Sum_probs=117.4
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
..|.++....+| .|..|+.+| +..||..+.+...........|.++.. .++. +..+.
T Consensus 63 ~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~-lWigt------------------- 119 (758)
T 3ott_A 63 TRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGDT-LWLGA------------------- 119 (758)
T ss_dssp SCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETTE-EEEEE-------------------
T ss_pred ceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCCc-EEEEc-------------------
Confidence 568888877776 466666666 788998765432211112335776654 3443 33343
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEc-----cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE-cc--
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLL-----GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL-TG-- 161 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~-----~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l-~~-- 161 (641)
.+ -+..+|..+++.. .+. .....|.++...+++.+.+ |+. +-+..+|..+++..... ..
T Consensus 120 ---------~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~-~Gl~~~~~~~~~~~~~~~~~~~ 186 (758)
T 3ott_A 120 ---------LN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYV-GTY-NGLCRYIPSNGKFEGIPLPVHS 186 (758)
T ss_dssp ---------TT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEE-EET-TEEEEEETTTTEEEEECCCCCT
T ss_pred ---------CC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEE-EeC-CCHhhCccCCCceEEecCCCcc
Confidence 34 5788888776543 331 1235688888888887555 444 45778888776532211 11
Q ss_pred --CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeeccc--CCCceeeeeeeeeeCCCeeEEEec
Q psy9327 162 --HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKS--KHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 162 --h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~--~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
....|.++...+++..|..|+. +-+..+|..+.+......-....+.++.. ...+| .+..+ -+.+++
T Consensus 187 ~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW-------igT~~-Gl~~~~ 257 (758)
T 3ott_A 187 SQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLL-------AGTDN-GLYVYH 257 (758)
T ss_dssp TCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEE-------EEETT-EEEEEC
T ss_pred ccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEE-------EEeCC-ceeEEe
Confidence 1234888888877765555553 45788888765432211101122322221 12222 22233 466666
Q ss_pred CCCcceeeec---------CCcceEEEEEcCCccEEEEecCCe
Q psy9327 238 RKMEPLCNIH---------ENTRVKSGAWDESGVFIYTTSNHI 271 (641)
Q Consensus 238 ~~~~~~~~~~---------~~~~I~sla~~p~g~~L~t~s~~~ 271 (641)
.....+..+. ....|.++.-|.+|. ||.|+..|
T Consensus 258 ~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWiGT~~G 299 (758)
T 3ott_A 258 NDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHN-IWLGTDYG 299 (758)
T ss_dssp CTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCC-EEEEESSS
T ss_pred cCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC-EEEEeCCc
Confidence 4433332221 134588888887765 55555555
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=83.14 E-value=38 Score=33.53 Aligned_cols=259 Identities=10% Similarity=0.031 Sum_probs=126.7
Q ss_pred EccCCCeEEEEeC--CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeE
Q psy9327 17 FHPKRPWILSSLH--NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIK 94 (641)
Q Consensus 17 fspdg~~Lasg~~--dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~ 94 (641)
|++++.++.-+.. ++.|...+.+ |....++... . +--+++++.+|.-+.... + +.... .
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~d-g~~~~~l~~~--~--~~~i~~~g~~Iyy~~~~~-----~--------~~~~~-~ 81 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNID-GSNIHKLSND--T--AMYINADKNYVYYVRNNN-----Q--------KITSQ-T 81 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETT-SCSCEEEEEE--E--EEEEEECSSEEEEEEECC--------------------C
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCC-CCCCEEccCC--c--eeeEEEcCCEEEEEECCC-----C--------ccccc-c
Confidence 4457777776642 4555555543 4344444332 1 345578999888775100 0 00000 0
Q ss_pred EEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEe----CCCeEEEEECCCCeeEEEEccCCCCEEEEE
Q psy9327 95 SVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS----DDQTIRIWYWQSRNCICVLTGHNHYVMCAQ 170 (641)
Q Consensus 95 ~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs----~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~ 170 (641)
......+.|+..++..++... +.. .. +..|++++.+|+-.. .+..|..-++.... ...+..+.. ..
T Consensus 82 ~~~~n~~~Iy~i~~dg~~~~~-l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~ 151 (302)
T 3s25_A 82 FFSYDRNSLCRIKRNGHGSTV-LDP--DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FT 151 (302)
T ss_dssp CSSCCSEEEEEEETTSCCCEE-EEC--SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CC
T ss_pred eeccCCCeEEEEeCCCCcceE-eec--CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eE
Confidence 000124578888887665322 221 22 236788888887665 34567667766433 344544433 45
Q ss_pred EecCCCEEEEEeC-CCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeee--CCCeeEEEecCCCcceeeec
Q psy9327 171 FHPTDDIVVSASL-DQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYC--NPKHTLHICNRKMEPLCNIH 247 (641)
Q Consensus 171 fsp~g~~lvSgs~-DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~--~~d~~I~i~d~~~~~~~~~~ 247 (641)
|+|++..|.-.+. ...|.+-++.+........+. .-. |++.....+... .....|...+..+.....+.
T Consensus 152 ~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~--~~~------~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt 223 (302)
T 3s25_A 152 CNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCN--CYK------PVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLT 223 (302)
T ss_dssp SEEETTEEEEECTTTCCEEEEETTTTEEEEEECSC--EEE------EEEEETTEEEEEEGGGTTEEEEECSSSCCCEECS
T ss_pred eeEECCEEEEEeCCCceEEEEECCCCCEEEEeCCC--ccc------eeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEe
Confidence 6788888776655 678888888776654443321 100 111000001111 11234555554443333333
Q ss_pred CCcceEEEEEcCCccEEEEec--CCeEEEEEcCCCCe-EeccccceEEEEEcCcEEEEEe-CCCCeEEEEeC
Q psy9327 248 ENTRVKSGAWDESGVFIYTTS--NHIKYAIVNGDHGI-IRTLDLPIYITKIKGNQVYYLD-RECSPHVLRID 315 (641)
Q Consensus 248 ~~~~I~sla~~p~g~~L~t~s--~~~k~~l~~~~~g~-I~~~d~p~~~~~~~g~~v~~~~-~dg~i~v~~~~ 315 (641)
. ..+ ..|+|+|.+|+-++ ....+...+.+... .+..+.........++.|+-.+ +.+.+...+.+
T Consensus 224 ~-~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~~~~~i~i~~d~Iy~td~~~~~i~~~~~d 292 (302)
T 3s25_A 224 E-ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKGEFCNINVTSQYVYFTDFVSNKEYCTSTQ 292 (302)
T ss_dssp C-SCE--EEEEEETTEEEEEECSSSCEEEEEETTSCCCEEEEESCEEEEEECSSEEEEEETTTCCEEEEESS
T ss_pred C-CCc--ceEEECCCEEEEEECCCCcEEEEEECCCCccEEeeCCccceEEEeCCEEEEEECCCCeEEEEECC
Confidence 2 233 34778888887653 23444444433322 1222222233445566665555 44555555544
|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B | Back alignment and structure |
|---|
Probab=82.77 E-value=38 Score=33.16 Aligned_cols=89 Identities=9% Similarity=-0.015 Sum_probs=46.1
Q ss_pred CCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEE
Q psy9327 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVV 179 (641)
Q Consensus 100 Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lv 179 (641)
||.|..|-....-.+..-..-...|..++...+. .+.-. |+.|+.|-......+..-......|..++...+...+
T Consensus 80 ~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~- 155 (282)
T 3qhy_B 80 DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWA--SYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALA- 155 (282)
T ss_dssp TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTE--EEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEE-
T ss_pred CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCE--EEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEE-
Confidence 7888888654321111001113467777765544 33334 8999999765422111111123456666654332223
Q ss_pred EEeCCCeEEEEecCC
Q psy9327 180 SASLDQTIRVWDISG 194 (641)
Q Consensus 180 Sgs~DgtI~IWD~~~ 194 (641)
-. ||.+..|-...
T Consensus 156 -l~-~G~v~~wG~n~ 168 (282)
T 3qhy_B 156 -VK-NGGVIAWGDNY 168 (282)
T ss_dssp -EE-TTEEEEEECCT
T ss_pred -EE-CCEEEEecCCC
Confidence 23 79999997654
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=81.92 E-value=46 Score=33.60 Aligned_cols=102 Identities=10% Similarity=0.084 Sum_probs=59.4
Q ss_pred cCeEEEEEeCCCC-EEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE-------ccCCCC
Q psy9327 52 GPVRGICFHNQQP-IFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL-------LGHLDY 123 (641)
Q Consensus 52 ~~V~~i~fsp~~~-~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~-------~~h~~~ 123 (641)
....+|+|.|+++ ++++- ..|.|++++.. ++....+ ....+.
T Consensus 18 ~~P~~i~~~pdG~~l~V~e-----------------------------~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g 67 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITL-----------------------------RGGELRHWQAG-KGLSAPLSGVPDVWAHGQGG 67 (353)
T ss_dssp SSEEEEEECSTTCCEEEEE-----------------------------TTTEEEEEETT-TEECCCCBSCCCCCCSTTCS
T ss_pred CCcEEEEEcCCCCEEEEEe-----------------------------CCceEEEEeCC-CceeeEecCCcccccCCCCC
Confidence 3457899999999 66554 57899999853 4322111 122456
Q ss_pred eEEEEEccC---CCEE-EEEeC-------CCeEEEEECCCC--e--eEEE-Ec------cCCCCEEEEEEecCCCEEEEE
Q psy9327 124 IRTTFFHHE---YPWI-LSASD-------DQTIRIWYWQSR--N--CICV-LT------GHNHYVMCAQFHPTDDIVVSA 181 (641)
Q Consensus 124 V~~v~fsp~---~~~l-~sgs~-------Dg~I~vWd~~~~--~--~i~~-l~------~h~~~V~sl~fsp~g~~lvSg 181 (641)
...++|+|+ +.+| ++-+. ...|..|++... + .... +. ...+....+.|.|+|.+.++.
T Consensus 68 ~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 147 (353)
T 2g8s_A 68 LLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIAL 147 (353)
T ss_dssp EEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEE
T ss_pred ceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEE
Confidence 789999995 4444 44322 235666666432 1 1111 11 112334679999999766665
Q ss_pred eC
Q psy9327 182 SL 183 (641)
Q Consensus 182 s~ 183 (641)
+.
T Consensus 148 Gd 149 (353)
T 2g8s_A 148 GE 149 (353)
T ss_dssp CC
T ss_pred CC
Confidence 43
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=81.76 E-value=73 Score=35.75 Aligned_cols=151 Identities=13% Similarity=0.085 Sum_probs=88.9
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccc-cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~-~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
.+.|.+|.-..+|. +..|..+| +..||-..-+..... ......|.++.-.+++. |..|.
T Consensus 21 ~n~V~~I~qD~~G~-lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g~-lWigT----------------- 80 (758)
T 3ott_A 21 ASVVSCFLQDSEGL-IWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNTY-LYMGT----------------- 80 (758)
T ss_dssp CCCEEEEEECTTSC-EEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTTE-EEEEE-----------------
T ss_pred cceEEEEEECCCCC-EEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCCc-EEEEe-----------------
Confidence 46799999988885 55666777 556774322111111 11245688887777664 44443
Q ss_pred CcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc-----cC
Q psy9327 88 PCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT-----GH 162 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~-----~h 162 (641)
.+| +..||..+.+...........|+++.. .++. +..|+.+ .+..+|..+++.. .+. -.
T Consensus 81 -----------~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~-lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~ 144 (758)
T 3ott_A 81 -----------DNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGDT-LWLGALN-GLYTYQLQSRKLT-SFDTRRNGLP 144 (758)
T ss_dssp -----------TTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETTE-EEEEETT-EEEEEETTTCCEE-EECHHHHCCS
T ss_pred -----------CCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCCc-EEEEcCC-cceeEeCCCCeEE-EeccCCCCcC
Confidence 444 788998876543211112335777654 3454 5555555 6888998766533 331 12
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 197 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~ 197 (641)
...|.++...++|.+.+ |+.+ -+..+|..+.+.
T Consensus 145 ~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~ 177 (758)
T 3ott_A 145 NNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKF 177 (758)
T ss_dssp CSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEE
T ss_pred CCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCce
Confidence 35688888777777555 4444 577788776543
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=80.96 E-value=3.6 Score=44.69 Aligned_cols=116 Identities=16% Similarity=0.025 Sum_probs=76.1
Q ss_pred CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC------Cee-------EEEEcc
Q psy9327 53 PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ------RKC-------IFTLLG 119 (641)
Q Consensus 53 ~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t------~~~-------~~~~~~ 119 (641)
...++.++|||+++++++. .+.++.|+|++. ++. ....+.
T Consensus 324 sPHGv~vsPDGkyi~v~GK---------------------------LsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~ 376 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGK---------------------------LSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL 376 (638)
T ss_dssp SCCCEEECTTSCEEEEECT---------------------------TSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC
T ss_pred CCcceeeCCCCCEEEEcCC---------------------------CCCeEEEEEeehhhhhhhccccCcccceEeeccC
Confidence 4467889999999999884 788999999873 111 222222
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC----------eeEEEEccCCCCEEEE-----EEecCCCEEEEEeC-
Q psy9327 120 HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR----------NCICVLTGHNHYVMCA-----QFHPTDDIVVSASL- 183 (641)
Q Consensus 120 h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~----------~~i~~l~~h~~~V~sl-----~fsp~g~~lvSgs~- 183 (641)
-. .....+|.++|.-..|-.-|..|.-||+... ..+..+.-|-.+-.-. .-.|+|+||++...
T Consensus 377 Gl-GPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~ 455 (638)
T 3sbq_A 377 GL-GPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKF 455 (638)
T ss_dssp CS-CEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESC
T ss_pred CC-cccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEeccc
Confidence 22 4467899999965666678999999998653 3455565443322211 12568899998754
Q ss_pred --CCe----------EEEEecCCCc
Q psy9327 184 --DQT----------IRVWDISGLR 196 (641)
Q Consensus 184 --Dgt----------I~IWD~~~~~ 196 (641)
|+. -.+.|++..+
T Consensus 456 skdrfl~vGpl~pen~QlidIsGdk 480 (638)
T 3sbq_A 456 SKDRFLPVGPLHPENDQLIDISGDE 480 (638)
T ss_dssp CTTSSCCCSSSCCEEEEEEECSSSS
T ss_pred ccccCcCCCCCCCCcceeEecCCCc
Confidence 443 3667775543
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=80.70 E-value=41 Score=37.64 Aligned_cols=94 Identities=7% Similarity=0.016 Sum_probs=54.0
Q ss_pred eEEEEECCCCeeEEE--EccCCCCeEEEEEccCCCEEEEEeCCC--eEEEEECCCCeeEEEE-----ccCCCCEEEEEEe
Q psy9327 102 KIKVWNYKQRKCIFT--LLGHLDYIRTTFFHHEYPWILSASDDQ--TIRIWYWQSRNCICVL-----TGHNHYVMCAQFH 172 (641)
Q Consensus 102 ~I~vWD~~t~~~~~~--~~~h~~~V~~v~fsp~~~~l~sgs~Dg--~I~vWd~~~~~~i~~l-----~~h~~~V~sl~fs 172 (641)
.+.+||..+.+.... +......- +++...++.+++.||.++ .+.+||..+.+-...- ......-.++.+.
T Consensus 469 dv~~yd~~t~~W~~~~~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~ 547 (695)
T 2zwa_A 469 DNWIFDMKTREWSMIKSLSHTRFRH-SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFD 547 (695)
T ss_dssp CCEEEETTTTEEEECCCCSBCCBSC-EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEE
T ss_pred cEEEEeCCCCcEEECCCCCCCcccc-eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEe
Confidence 488899888654332 11111111 233324788888888655 7999999887632211 1111122335556
Q ss_pred cC-CCEEEEEeC--C-----CeEEEEecCCCc
Q psy9327 173 PT-DDIVVSASL--D-----QTIRVWDISGLR 196 (641)
Q Consensus 173 p~-g~~lvSgs~--D-----gtI~IWD~~~~~ 196 (641)
.+ +.+++.|+. + ..+.+||+.+.+
T Consensus 548 ~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 548 PVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 55 667777765 2 468899988766
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=80.59 E-value=18 Score=40.73 Aligned_cols=151 Identities=9% Similarity=0.091 Sum_probs=78.7
Q ss_pred CCCeEEEEeCC------CcEEEEECccCcc--cccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcce
Q psy9327 20 KRPWILSSLHN------GVIQLWDYRMNTL--LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLF 91 (641)
Q Consensus 20 dg~~Lasg~~d------g~I~iWD~~~~~~--l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~ 91 (641)
++.+++.||.+ ..+.+||..+.+- +..+...... .+++...++..++.||.
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~-------------------- 509 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGV-------------------- 509 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCB--------------------
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCC--------------------
Confidence 67777777754 3477888766432 2111111111 12222247778888772
Q ss_pred eeEEEeeCCCeEEEEECCCCeeEEEEc-----cCCCCeEEEEEccC-CCEEEEEeC--C-----CeEEEEECCCCee---
Q psy9327 92 RIKSVLGDDYKIKVWNYKQRKCIFTLL-----GHLDYIRTTFFHHE-YPWILSASD--D-----QTIRIWYWQSRNC--- 155 (641)
Q Consensus 92 ~~~~~~s~Dg~I~vWD~~t~~~~~~~~-----~h~~~V~~v~fsp~-~~~l~sgs~--D-----g~I~vWd~~~~~~--- 155 (641)
..++.+.+||..+.+....-. .......++.+..+ +.+++.||. + ..+.+||+.+.+.
T Consensus 510 ------~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~ 583 (695)
T 2zwa_A 510 ------TEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEP 583 (695)
T ss_dssp ------CSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCC
T ss_pred ------CCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccc
Confidence 012278999998876443221 11122233555555 667777775 2 4688999887761
Q ss_pred --EEEEcc---CCCCEEEEEEecCCCEEEEEeCC--------CeEEEEecCCCce
Q psy9327 156 --ICVLTG---HNHYVMCAQFHPTDDIVVSASLD--------QTIRVWDISGLRK 197 (641)
Q Consensus 156 --i~~l~~---h~~~V~sl~fsp~g~~lvSgs~D--------gtI~IWD~~~~~~ 197 (641)
...+.. ....-.+++...++.+++.|+.+ ..+.+||..+.+-
T Consensus 584 ~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 584 ITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp EEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred eEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 222211 11111123333336677777643 3577777766443
|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=80.49 E-value=23 Score=37.60 Aligned_cols=53 Identities=9% Similarity=0.110 Sum_probs=35.4
Q ss_pred CCeEEEEEccCCC-eEEEEeCCCcEEEEECccCc---cccc----ccc-----cccCeEEEEEeCC
Q psy9327 10 ARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNT---LLEK----FDE-----HEGPVRGICFHNQ 62 (641)
Q Consensus 10 ~~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~---~l~~----~~~-----h~~~V~~i~fsp~ 62 (641)
..-.+|+|.|+|. .++++...|.|++++-.... .+.. +.. ..+...+|+|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 4467899999996 56667788999999743221 1111 111 1457889999996
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 641 | ||||
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-30 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-19 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-18 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-11 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-10 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 2e-24 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 3e-17 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 5e-09 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 6e-09 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 1e-04 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 5e-20 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 3e-14 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 3e-07 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 8e-07 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 2e-18 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 2e-14 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 4e-12 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 4e-08 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 4e-17 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 2e-14 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 4e-07 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 1e-06 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 5e-14 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 1e-08 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 3e-07 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 0.003 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-13 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-11 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-11 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-08 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 2e-12 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 4e-11 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 5e-10 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 0.001 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 3e-12 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 3e-04 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 5e-04 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 4e-12 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 3e-08 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 4e-12 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 2e-06 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 9e-06 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 1e-11 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 5e-11 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 1e-10 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 2e-08 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 5e-05 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 7e-11 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 2e-06 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 6e-05 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 2e-04 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 2e-10 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 1e-09 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 2e-07 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 3e-05 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 4e-05 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 0.001 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 6e-10 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 4e-09 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 3e-08 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 2e-04 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 1e-08 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 6e-08 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 6e-07 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 9e-08 | |
| d1hzua2 | 426 | b.70.2.1 (A:118-543) C-terminal (heme d1) domain o | 2e-05 | |
| d1hzua2 | 426 | b.70.2.1 (A:118-543) C-terminal (heme d1) domain o | 0.002 | |
| d1mdah_ | 368 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 3e-04 | |
| d1ri6a_ | 333 | b.69.11.1 (A:) Putative isomerase YbhE {Escherichi | 0.001 | |
| d1l0qa2 | 301 | b.69.2.3 (A:1-301) Surface layer protein {Archaeon | 0.004 |
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 119 bits (298), Expect = 2e-30
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 8/191 (4%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+ F V+ + + I S ++ +++W + EH V I +
Sbjct: 135 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWA 194
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
+ + D IK+W+ C+ TL+GH
Sbjct: 195 PESSYSSISEATGSETKKSGKPGPFLLSG--------SRDKTIKMWDVSTGMCLMTLVGH 246
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
+++R FH +ILS +DD+T+R+W ++++ C+ L H H+V FH T VV+
Sbjct: 247 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVT 306
Query: 181 ASLDQTIRVWD 191
S+DQT++VW+
Sbjct: 307 GSVDQTVKVWE 317
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 87.1 bits (214), Expect = 2e-19
Identities = 39/195 (20%), Positives = 72/195 (36%), Gaps = 8/195 (4%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
P I+S+ + I++W+ + ++ F H VR + + + S +
Sbjct: 109 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV- 167
Query: 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWI 136
+ + C ++ I I T P++
Sbjct: 168 ---RVWVVATKECKAELREHRHVVECISWAPESSYSSI----SEATGSETKKSGKPGPFL 220
Query: 137 LSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196
LS S D+TI++W + C+ L GH+++V FH ++S + D+T+RVWD R
Sbjct: 221 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 280
Query: 197 KKNVAPGMGKLVLSM 211
V S+
Sbjct: 281 CMKTLNAHEHFVTSL 295
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 84.8 bits (208), Expect = 1e-18
Identities = 54/289 (18%), Positives = 103/289 (35%), Gaps = 36/289 (12%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
+ V + FHP ++S+ + I++WDY H V+ I F + + S
Sbjct: 17 RSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLAS 76
Query: 69 GGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTF 128
+ + W+++ +CI T+ GH + +
Sbjct: 77 CSADMTIKL----------------------------WDFQGFECIRTMHGHDHNVSSVS 108
Query: 129 FHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIR 188
I+SAS D+TI++W Q+ C+ TGH +V + + ++ S S DQT+R
Sbjct: 109 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 168
Query: 189 VWDISGLRKKNVAPGMGKLVLSMKSKHP-------IWKYCKPVKYCNPKHTLHICNR-KM 240
VW ++ K +V + + K P L +R K
Sbjct: 169 VWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 228
Query: 241 EPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLP 289
+ ++ + + ++ V + K+ + D +R D
Sbjct: 229 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 277
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 64.0 bits (154), Expect = 1e-11
Identities = 35/167 (20%), Positives = 63/167 (37%), Gaps = 5/167 (2%)
Query: 104 KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
K W + + L GH + FH + ++SAS+D TI++W +++ + L GH
Sbjct: 1 KEWI-PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 59
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKP 223
V F + ++ S S D TI++WD G G ++ S +
Sbjct: 60 DSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDH---NVSSVSIMPNGDHI 116
Query: 224 VKYCNPKHTLHICNRKMEPLCNIHENTRV-KSGAWDESGVFIYTTSN 269
V K + + + + ++ G I + SN
Sbjct: 117 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 163
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 60.9 bits (146), Expect = 1e-10
Identities = 26/125 (20%), Positives = 39/125 (31%)
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPI 217
L+GH V FHP ++VSAS D TI+VWD + G V + H
Sbjct: 12 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 71
Query: 218 WKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277
K + + N S + + + IK V
Sbjct: 72 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ 131
Query: 278 GDHGI 282
+ +
Sbjct: 132 TGYCV 136
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 102 bits (255), Expect = 2e-24
Identities = 36/182 (19%), Positives = 61/182 (33%), Gaps = 30/182 (16%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
V LS P +S + +LWD R + F HE + ICF F +G
Sbjct: 187 VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS- 245
Query: 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY--IRTTFF 129
DD ++++ + + + T I + F
Sbjct: 246 ---------------------------DDATCRLFDLRADQELMTYSHDNIICGITSVSF 278
Query: 130 HHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 189
+L+ DD +W + VL GH++ V C V + S D +++
Sbjct: 279 SKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338
Query: 190 WD 191
W+
Sbjct: 339 WN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 81.3 bits (199), Expect = 3e-17
Identities = 28/199 (14%), Positives = 61/199 (30%), Gaps = 17/199 (8%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
A++ + + ++S+ +G + +WD + V +
Sbjct: 55 LAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVAC 114
Query: 69 GGKMIVMAYQGCILESRNEPCLFRIKSVLGD-----------------DYKIKVWNYKQR 111
GG + + N + G D +W+ +
Sbjct: 115 GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETG 174
Query: 112 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQF 171
+ T GH + + + +S + D + ++W + C TGH + F
Sbjct: 175 QQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICF 234
Query: 172 HPTDDIVVSASLDQTIRVW 190
P + + S D T R++
Sbjct: 235 FPNGNAFATGSDDATCRLF 253
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 56.3 bits (134), Expect = 5e-09
Identities = 22/138 (15%), Positives = 42/138 (30%)
Query: 110 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169
Q + TL GHL I + + ++SAS D + IW + N + + + +VM
Sbjct: 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTC 103
Query: 170 QFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNP 229
+ P+ + V LD ++++ S + V
Sbjct: 104 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGD 163
Query: 230 KHTLHICNRKMEPLCNIH 247
+
Sbjct: 164 TTCALWDIETGQQTTTFT 181
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 55.9 bits (133), Expect = 6e-09
Identities = 30/269 (11%), Positives = 72/269 (26%), Gaps = 32/269 (11%)
Query: 50 HEGPVRGICFHNQQPIFVSGGK----MIVMAYQG--------------CILESRNEPCLF 91
H + + + + VS + +I +Y + + +
Sbjct: 54 HLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVA 113
Query: 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151
+ L GH + + I+++S D T +W +
Sbjct: 114 CGGLDNICSIYNLKTREGNVRVSRELAGH-TGYLSCCRFLDDNQIVTSSGDTTCALWDIE 172
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM------- 204
+ TGH VM P + VS + D + ++WD+ + G
Sbjct: 173 TGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAI 232
Query: 205 -----GKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDE 259
G + + ++ + + + +G D
Sbjct: 233 CFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF 292
Query: 260 SGVFIYTTSNHIKYAIVNGDHGIIRTLDL 288
+ ++ + ++ G + L +
Sbjct: 293 N-CNVWDALKADRAGVLAGHDNRVSCLGV 320
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 42.4 bits (98), Expect = 1e-04
Identities = 13/82 (15%), Positives = 22/82 (26%)
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVL 209
L GH + + ++VSAS D + +WD K + P V+
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 210 SMKSKHPIWKYCKPVKYCNPKH 231
+
Sbjct: 102 TCAYAPSGNYVACGGLDNICSI 123
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 90.2 bits (222), Expect = 5e-20
Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 29/189 (15%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDE-------HEGPVRGICFHNQQPIFVSG 69
+I + + +++WD L+E+ D H+ V + F VSG
Sbjct: 213 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 272
Query: 70 GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF 129
++ ++ + K C T +GH D++ +
Sbjct: 273 S----------------LDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVAT 316
Query: 130 HHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMC------AQFHPTDDIVVSASL 183
+ILS S D+ + W +S N + +L GH + V+ + P ++ + S
Sbjct: 317 TQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSG 376
Query: 184 DQTIRVWDI 192
D R+W
Sbjct: 377 DCKARIWKY 385
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 72.5 bits (176), Expect = 3e-14
Identities = 40/318 (12%), Positives = 96/318 (30%), Gaps = 61/318 (19%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDE------------------H 50
++ V + F ++ + N Q++ +L+ + +
Sbjct: 62 TSVVCCVKFSNDGEYLATG-CNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSS 120
Query: 51 EGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLG------------ 98
+ +R +CF +G + ++ + +
Sbjct: 121 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVS 180
Query: 99 --DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156
D +++W+ + +C TL + +I + S D+ +R+W ++ +
Sbjct: 181 GSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 240
Query: 157 CVL-------TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVL 209
L TGH V F VVS SLD+++++W++ K
Sbjct: 241 ERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNK----------- 289
Query: 210 SMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSN 269
K + T + + + + SG+ D V + +
Sbjct: 290 ---------SDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG-VLFWDKKS 339
Query: 270 HIKYAIVNGDHGIIRTLD 287
++ G + ++
Sbjct: 340 GNPLLMLQGHRNSVISVA 357
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 50.6 bits (119), Expect = 3e-07
Identities = 45/277 (16%), Positives = 92/277 (33%), Gaps = 21/277 (7%)
Query: 15 LSFHPKR-PWILSSLHNGVIQLWD----YRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
L + P L N L++ ++ L K +H V + F N +G
Sbjct: 21 LDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATG 80
Query: 70 GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF 129
+ + + R+ + + N + YIR+ F
Sbjct: 81 CNKTTQ-----VYRVSDGSLVARLSDDSAANKDPENLN------TSSSPSSDLYIRSVCF 129
Query: 130 HHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 189
+ ++ + ++D+ IRIW ++R + +L GH + + P+ D +VS S D+T+R+
Sbjct: 130 SPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRI 189
Query: 190 WDISGLRKKNVAPGMGKLVLSMKSKHPIWKYC-----KPVKYCNPKHTLHICNRKMEPLC 244
WD+ + + S + V+ + + + E
Sbjct: 190 WDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENES 249
Query: 245 NIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG 281
V S + G + + S + N +
Sbjct: 250 GTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 286
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 49.4 bits (116), Expect = 8e-07
Identities = 15/110 (13%), Positives = 27/110 (24%), Gaps = 22/110 (20%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+ V ++ +ILS + + WD + L H V +
Sbjct: 300 CEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVA 359
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ 110
N + D K ++W YK+
Sbjct: 360 NGSS-LGPEYNVFATG---------------------SGDCKARIWKYKK 387
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.5 bits (207), Expect = 2e-18
Identities = 47/259 (18%), Positives = 88/259 (33%), Gaps = 17/259 (6%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM 75
I+S + +++W L H G V + I S + + +
Sbjct: 22 CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKV 81
Query: 76 AYQGCI----------LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIR 125
R + D ++VW+ + +C+ L+GH+ +R
Sbjct: 82 WNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 141
Query: 126 TTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQ 185
++ ++S + D +++W ++ C+ L GH + V QF VVS SLD
Sbjct: 142 --CVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI--HVVSGSLDT 197
Query: 186 TIRVWDISGLRKKNVAPGMGKLVLSMKSKHPI---WKYCKPVKYCNPKHTLHICNRKMEP 242
+IRVWD+ + G L M+ K I VK + K + +
Sbjct: 198 SIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPN 257
Query: 243 LCNIHENTRVKSGAWDESG 261
+ + +
Sbjct: 258 KHQSAVTCLQFNKNFVITS 276
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.5 bits (176), Expect = 2e-14
Identities = 33/197 (16%), Positives = 66/197 (33%), Gaps = 20/197 (10%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
++S ++ ++++WD T L H V + F + S I +
Sbjct: 143 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVW 202
Query: 77 YQGCILESRNEPCLFRIKSVL----------GDDYKIKVWNYKQRKCIFTLLGHLDYIRT 126
+ S + D +K+W+ K +C+ TL G +
Sbjct: 203 DVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 262
Query: 127 TFFHHEYP-WILSASDDQTIRIWYWQSRNCICVLT-----GHNHYVMCAQFHPTDDIVVS 180
+++++SDD T+++W ++ I L G V + T +
Sbjct: 263 VTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAV 322
Query: 181 ASLDQT----IRVWDIS 193
S + T + V D
Sbjct: 323 GSRNGTEETKLLVLDFD 339
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.6 bits (158), Expect = 4e-12
Identities = 28/209 (13%), Positives = 60/209 (28%), Gaps = 21/209 (10%)
Query: 106 WNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY 165
W + K L GH D++ T I+S SDD T+++W + C+ L GH
Sbjct: 1 WRRGELKSPKVLKGHDDHVITCLQFCGN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59
Query: 166 VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVK 225
V +Q I S + + + H ++ + V+
Sbjct: 60 VWSSQMRDNIIISGSTDRTLKVWNAET------------------GECIHTLYGHTSTVR 101
Query: 226 YCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRT 285
+ + + L T + + + +++
Sbjct: 102 CMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKV 161
Query: 286 LDLPIY--ITKIKGNQVYYLDRECSPHVL 312
D + ++G+ + +
Sbjct: 162 WDPETETCLHTLQGHTNRVYSLQFDGIHV 190
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.3 bits (126), Expect = 4e-08
Identities = 34/172 (19%), Positives = 62/172 (36%), Gaps = 10/172 (5%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
DD +KVW+ KC+ TL+GH + ++ + W + C
Sbjct: 34 SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIIS----GSTDRTLKVWNAETGEC 89
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPI 217
+ T + H H + VVS S D T+RVWDI + +V G V +
Sbjct: 90 IHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV------ 143
Query: 218 WKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSN 269
+ V + + + + E + + + + G+ + + S
Sbjct: 144 QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSL 195
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.9 bits (195), Expect = 4e-17
Identities = 50/218 (22%), Positives = 76/218 (34%), Gaps = 18/218 (8%)
Query: 1 MLTKFETKSARVKG-LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICF 59
L + +S KG I+S L + I++WD H G V + +
Sbjct: 4 SLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY 63
Query: 60 HNQQPIFVSGGKMIVMAY----------QGCILESRNEPCLFRIKSVLGDDYKIKVWNYK 109
+ I S + + + + D I VW+
Sbjct: 64 DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMA 123
Query: 110 QRKCIFT---LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYV 166
I L+GH + F +Y SAS D+TI++W + + L GH +
Sbjct: 124 SPTDITLRRVLVGHRAAVNVVDFDDKYIV--SASGDRTIKVWNTSTCEFVRTLNGHKRGI 181
Query: 167 MCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM 204
C Q+ +VVS S D TIR+WDI V G
Sbjct: 182 ACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGH 217
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.8 bits (174), Expect = 2e-14
Identities = 39/197 (19%), Positives = 67/197 (34%), Gaps = 26/197 (13%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEK---FDEHEGPVRGICFHNQQPIFVSGGKMI 73
+++ + I +WD T + H V + F ++ + SG + I
Sbjct: 101 LRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI 160
Query: 74 ----------VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY 123
V G R+ D I++W+ + C+ L GH
Sbjct: 161 KVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH--E 218
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYWQSRN---------CICVLTGHNHYVMCAQFHPT 174
+ I+S + D I++W + C+ L H+ V QF
Sbjct: 219 ELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEF 278
Query: 175 DDIVVSASLDQTIRVWD 191
+VS+S D TI +WD
Sbjct: 279 --QIVSSSHDDTILIWD 293
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.8 bits (117), Expect = 4e-07
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 111 RKCIFTLLGHLDYIRT-TFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169
R + + + + ++ I+S D TI+IW + C +LTGH V+C
Sbjct: 2 RHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCL 61
Query: 170 QFHP 173
Q+
Sbjct: 62 QYDE 65
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.9 bits (112), Expect = 1e-06
Identities = 26/231 (11%), Positives = 58/231 (25%), Gaps = 36/231 (15%)
Query: 44 LEKFDEHEGPVRGI-CFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYK 102
L++ +G+ C VSG D
Sbjct: 5 LQRIHCRSETSKGVYCLQYDDQKIVSGL----------------------------RDNT 36
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
IK+W+ +C L GH + + S+ + +
Sbjct: 37 IKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCE 96
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCK 222
+ D++I VWD++ ++ + +
Sbjct: 97 AVLHLRFNNGMMVTCSK----DRSIAVWDMA--SPTDITLRRVLVGHRAAVNVVDFDDKY 150
Query: 223 PVKYCNPKHTLHICNRKMEPLCNIHENTR-VKSGAWDESGVFIYTTSNHIK 272
V + E + ++ + R + + + V ++ N I+
Sbjct: 151 IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR 201
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.4 bits (173), Expect = 5e-14
Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 1/87 (1%)
Query: 106 WNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY 165
+ + + L H + + F + W +S D + W I + +
Sbjct: 250 VLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSS 308
Query: 166 VMCAQFHPTDDIVVSASLDQTIRVWDI 192
V+ D +V+ S D+ V+++
Sbjct: 309 VLSCDISVDDKYIVTGSGDKKATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.8 bits (130), Expect = 1e-08
Identities = 16/179 (8%), Positives = 44/179 (24%), Gaps = 7/179 (3%)
Query: 97 LGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW-----YWQ 151
D I + + I TL H + + + + + +++W +
Sbjct: 28 FPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHVYTGGKG-CVKVWDISHPGNK 85
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSM 211
S ++Y+ + P ++ T+ +WD++ + A
Sbjct: 86 SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACY 145
Query: 212 KSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNH 270
+ + + + G ++T
Sbjct: 146 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD 204
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.6 bits (119), Expect = 3e-07
Identities = 27/271 (9%), Positives = 57/271 (21%), Gaps = 72/271 (26%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-----TLLEKFDEHEGPVRGICFHNQQ 63
V ++ + + G +++WD + +R
Sbjct: 51 GEVVCAVTISNPTRHVYTG-GKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG 109
Query: 64 PIFVSGGK----------------MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWN 107
+ GG+ + + ++ D I VW+
Sbjct: 110 CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 169
Query: 108 YKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT------- 160
+ + GH D ++ + + D T+R W + +
Sbjct: 170 LHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFS 229
Query: 161 ---------------------------------GHNHYVMCAQFHPTDDIVVSASLDQTI 187
H V+ +F VS D +
Sbjct: 230 LGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLL 289
Query: 188 RVWDISGLRKKNVAPGMGKLVLSMKSKHPIW 218
W G + K +
Sbjct: 290 NAWRTP----------YGASIFQSKESSSVL 310
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.9 bits (86), Expect = 0.003
Identities = 26/227 (11%), Positives = 52/227 (22%), Gaps = 35/227 (15%)
Query: 49 EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWN- 107
H V + N +GG +KVW+
Sbjct: 49 NHGEVVCAVTISNPTRHVYTGG-----------------------------KGCVKVWDI 79
Query: 108 ----YKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
K L +YIR+ + ++ + T+ IW + +
Sbjct: 80 SHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTS 139
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKP 223
C + D V S + + L + + K
Sbjct: 140 SAPACYALAISPDSKVCFS-CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKL 198
Query: 224 VKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNH 270
R+ L +++ S + +G ++
Sbjct: 199 WTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMES 245
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 70.7 bits (171), Expect = 1e-13
Identities = 20/194 (10%), Positives = 47/194 (24%), Gaps = 8/194 (4%)
Query: 120 HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV--LTGHNHYVMCAQFHPTDDI 177
++ I ++ + I ++ + I+ + V L HN V + P +
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65
Query: 178 VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237
+V+ D+ VW + G K + ++ P + +
Sbjct: 66 IVTCGTDRNAYVWTLKGRTWKPTLVIL------RINRAARCVRWAPNEKKFAVGSGSRVI 119
Query: 238 RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLPIYITKIKG 297
S V + R I + +
Sbjct: 120 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERP 179
Query: 298 NQVYYLDRECSPHV 311
+ + +
Sbjct: 180 APTPWGSKMPFGEL 193
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 63.7 bits (153), Expect = 2e-11
Identities = 21/198 (10%), Positives = 49/198 (24%), Gaps = 34/198 (17%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
+ + V G+ F + H+ + L D + P+ + F +
Sbjct: 196 ESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITES 255
Query: 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY 123
+ +G D ++ Y + G LD
Sbjct: 256 SLVAAGH-----------------------------DCFPVLFTYDSAAGKLSFGGRLDV 286
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI----VV 179
+ + + D+ + + + H + V
Sbjct: 287 PKQSSQRGLTARERFQNLDKKASSE-GSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFC 345
Query: 180 SASLDQTIRVWDISGLRK 197
+ +D + +WD+ L
Sbjct: 346 TTGMDGGMSIWDVRSLES 363
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 63.7 bits (153), Expect = 2e-11
Identities = 40/287 (13%), Positives = 80/287 (27%), Gaps = 42/287 (14%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNT--LLEKFDEHEGPVRGICFHNQQPIFVSG 69
+ +++ R I +N + +++ N + + EH G V G+ + V+
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTC 69
Query: 70 GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR--KCIFTLLGHLDYIRTT 127
G D VW K R K +L R
Sbjct: 70 ----------------------------GTDRNAYVWTLKGRTWKPTLVILRINRAARCV 101
Query: 128 FFHHEYPWILSASDDQTIRIWYWQSRN----CICVLTGHNHYVMCAQFHPTDDIVVSASL 183
+ S + I I Y++ N C + V+ +HP ++ + S
Sbjct: 102 RWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 161
Query: 184 DQTIRVWDISG--LRKKNVAPGMGKLVLSMKSKHPIWKYCKPV----KYCNPKHTLHICN 237
D R++ + ++ G + + C V N + +
Sbjct: 162 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH 221
Query: 238 RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR 284
L + + V + A + + T D +
Sbjct: 222 DSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVL 268
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 54.1 bits (128), Expect = 2e-08
Identities = 29/287 (10%), Positives = 76/287 (26%), Gaps = 41/287 (14%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
+ + + + +V G+ + P I++ + +W + T C
Sbjct: 44 VHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRW 103
Query: 62 QQPIFVSGGKMIVMAYQGCILESRNE--------------------PCLFRIKSVLGDDY 101
C E N+ + + D+
Sbjct: 104 APNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF 163
Query: 102 KIKVWNYKQRK------------------CIFTLLGHLDYIRTTFFHHEYPWILSASDDQ 143
K ++++ ++ +F ++ F + S D
Sbjct: 164 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS 223
Query: 144 TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
T+ + + + L ++ F +V + D ++ K
Sbjct: 224 TVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFG- 281
Query: 204 MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENT 250
G+L + +S + + + K + L ++H+N+
Sbjct: 282 -GRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNS 327
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 66.4 bits (160), Expect = 2e-12
Identities = 22/295 (7%), Positives = 76/295 (25%), Gaps = 40/295 (13%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL---LEKFDEHEGPVRGICFHNQQPIFVS 68
+ + P + +L + +G + ++ + + L + ++ P+ F + + +
Sbjct: 14 ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIY 73
Query: 69 GG----------------KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK 112
G + + + R D I+V + +
Sbjct: 74 VGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYG 133
Query: 113 CIFTLLGHLDYIRTTFFHHEYPW------ILSASDDQTIRIWYWQSRNCI----CVLTGH 162
+ +L+ T + + ++ ++ ++ +
Sbjct: 134 DGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLK 193
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCK 222
A + +S+D + V S + +
Sbjct: 194 YQIRDVALLPKEQEGYACSSIDGRVAVEFFD--------DQGDDYNSSKRFAFRCHRLNL 245
Query: 223 PVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWD-ESGVFIYTTSNHIKYAIV 276
+ + + L + + W+ ++ I + + ++V
Sbjct: 246 KDTNLAYPVNSIEFSPRHKFLYTAGSDGIIS--CWNLQTRKKIKNFAKFNEDSVV 298
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 62.6 bits (150), Expect = 4e-11
Identities = 14/91 (15%), Positives = 32/91 (35%), Gaps = 1/91 (1%)
Query: 104 KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
K + ++ + + + F + ++ +A D I W Q+R I
Sbjct: 234 KRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF- 292
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194
+ + +D+I+ A+ D T +
Sbjct: 293 NEDSVVKIACSDNILCLATSDDTFKTNAAID 323
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 59.1 bits (141), Expect = 5e-10
Identities = 16/150 (10%), Positives = 39/150 (26%), Gaps = 4/150 (2%)
Query: 112 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL---TGHNHYVMC 168
+ + DYI +L S D ++ ++ + + L + H ++C
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLC 61
Query: 169 AQFHPTDD-IVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYC 227
F D + ++ I D+ G + + +
Sbjct: 62 CNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD 121
Query: 228 NPKHTLHICNRKMEPLCNIHENTRVKSGAW 257
+ N + + N+
Sbjct: 122 GLIEVIDPRNYGDGVIAVKNLNSNNTKVKN 151
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.4 bits (90), Expect = 0.001
Identities = 12/249 (4%), Positives = 45/249 (18%), Gaps = 31/249 (12%)
Query: 43 LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYK 102
+++ + + I + + + D
Sbjct: 3 IVQIEQAPKDYISDIKIIPSKSLLLITS----------------------------WDGS 34
Query: 103 IKVWNYKQRKCIFTL---LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
+ V+ + + L L + + F + Q + +
Sbjct: 35 LTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQA 94
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWK 219
+N + + + I + + L +
Sbjct: 95 LTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIF 154
Query: 220 YCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGD 279
+ + +N ++ + + +
Sbjct: 155 TMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSI 214
Query: 280 HGIIRTLDL 288
G +
Sbjct: 215 DGRVAVEFF 223
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 66.1 bits (159), Expect = 3e-12
Identities = 16/119 (13%), Positives = 35/119 (29%), Gaps = 3/119 (2%)
Query: 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWI 136
+ + S + + + K I + +
Sbjct: 207 FVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKF 266
Query: 137 LSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQ---FHPTDDIVVSASLDQTIRVWDI 192
+ D TIR+W + C+ T + Q + ++S SLD T+ +++
Sbjct: 267 ATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.1 bits (94), Expect = 3e-04
Identities = 29/263 (11%), Positives = 71/263 (26%), Gaps = 12/263 (4%)
Query: 7 TKSARVKGLSFHPKRPWILS-SLHNGVIQLWDYRMNTL--LEKFDEHEG-PVRGICFHNQ 62
T+ LS+ P I + ++ D + + + +F H V + F
Sbjct: 15 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPI 74
Query: 63 QP--IFVSG---GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL 117
+ SG GK+IV + + E + VL W+++ R+
Sbjct: 75 KGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVG 134
Query: 118 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177
G ++ + + Q I + + + +T + + P
Sbjct: 135 EGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKF 194
Query: 178 VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237
S + + + + K ++
Sbjct: 195 SASDRTHHKQGSFVRDVEFSPDSGEFVIT---VGSDRKISCFDGKSGEFLKYIEDDQEPV 251
Query: 238 RKMEPLCNIHENTRVKSGAWDES 260
+ + ++ + + D +
Sbjct: 252 QGGIFALSWLDSQKFATVGADAT 274
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.3 bits (92), Expect = 5e-04
Identities = 25/220 (11%), Positives = 53/220 (24%), Gaps = 34/220 (15%)
Query: 8 KSARVKGLSFHPKRP--WILSSLHNGVIQLWDYR--------MNTLLEKFDEHEGPVRGI 57
S+ V + F P + ++ S +G + +W + + +F GP+ I
Sbjct: 62 GSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDI 121
Query: 58 CFH--------------------NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVL 97
+ + G ++ P
Sbjct: 122 SWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDD 181
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
G + +K T ++R F + + +
Sbjct: 182 GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL 241
Query: 158 VLTGHNHYVMCAQFHPT----DDIVVSASLDQTIRVWDIS 193
+ + + D TIRVWD++
Sbjct: 242 KYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVT 281
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 65.3 bits (157), Expect = 4e-12
Identities = 18/177 (10%), Positives = 40/177 (22%), Gaps = 1/177 (0%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
L+ + + + V + G +
Sbjct: 134 DTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVH 193
Query: 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWI 136
+ +++ + + H + + + I
Sbjct: 194 SVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKI 253
Query: 137 LSASDDQTIRIWYWQSRNCICVLTGHN-HYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
SAS D+TI+IW + + T +VS S + I +
Sbjct: 254 ASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 53.4 bits (126), Expect = 3e-08
Identities = 28/276 (10%), Positives = 59/276 (21%), Gaps = 8/276 (2%)
Query: 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIF 66
T L P I V T E + EH
Sbjct: 15 TARGTAVVLGNTPAGDKIQYCNGTSVY-TVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYC 73
Query: 67 VSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRT 126
SG + I G I + +R
Sbjct: 74 ASGDVH--GNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVF 131
Query: 127 TFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQT 186
F L+ + + SR + ++ V + P +
Sbjct: 132 LFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKF 191
Query: 187 IRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNI 246
+ + + G ++ + + + + L
Sbjct: 192 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGV----FEDDSLKNVAHSGSVFGLTWS 247
Query: 247 HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI 282
+ T++ S + D++ + I+ + + I
Sbjct: 248 PDGTKIASASADKT-IKIWNVATLKVEKTIPVGTRI 282
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 65.0 bits (156), Expect = 4e-12
Identities = 16/120 (13%), Positives = 32/120 (26%), Gaps = 2/120 (1%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
+ + + + L + I + E
Sbjct: 168 ISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEE 227
Query: 134 PWILSASDDQTIRIWYWQS-RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ + S D I I+ + I L H V + +VS+ D I+ W++
Sbjct: 228 DLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWET-PSTLVSSGADACIKRWNV 286
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 47.6 bits (111), Expect = 2e-06
Identities = 14/142 (9%), Positives = 31/142 (21%), Gaps = 13/142 (9%)
Query: 110 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169
+ + T+ GH I + ++S S D I W S + H++ ++
Sbjct: 2 HDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSS-----MHQDHSNLIVSL 52
Query: 170 QFHPTDDIVVSASLDQTIRVWDISGLRKKN----VAPGMGKLVLSMKSKHPIWKYCKPVK 225
+ + D A G + +
Sbjct: 53 DNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGD 112
Query: 226 YCNPKHTLHICNRKMEPLCNIH 247
+ +
Sbjct: 113 IIKSVRLNSPGSAVSLSQNYVA 134
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.7 bits (106), Expect = 9e-06
Identities = 17/129 (13%), Positives = 41/129 (31%), Gaps = 10/129 (7%)
Query: 155 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMK-S 213
+ ++GHN + +P ++S S D I W S + + L++S+ S
Sbjct: 5 VLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ-----DHSNLIVSLDNS 55
Query: 214 KHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKY 273
K + + + + + D+ + + + + I
Sbjct: 56 KAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIK 115
Query: 274 AIVNGDHGI 282
++ G
Sbjct: 116 SVRLNSPGS 124
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 64.1 bits (154), Expect = 1e-11
Identities = 26/169 (15%), Positives = 57/169 (33%), Gaps = 1/169 (0%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
TL GH+ + T + ++++ +DD+ IR++ ++ + L+GH+ V ++
Sbjct: 6 TTLRGHMTSVITCLQFED-NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG 64
Query: 175 DDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLH 234
+V ++ G + ++ KY N H
Sbjct: 65 GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 124
Query: 235 ICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII 283
+ P + + +E+ F+ H+ HG I
Sbjct: 125 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNI 173
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 62.6 bits (150), Expect = 5e-11
Identities = 29/294 (9%), Positives = 76/294 (25%), Gaps = 22/294 (7%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG---- 70
L F ++++ + +I+++D L + H+G V + + + +
Sbjct: 19 LQFEDN--YVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTV 76
Query: 71 -----------KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG 119
+ E + D + VW + +
Sbjct: 77 RVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGE 136
Query: 120 HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVV 179
DY E P+ + + I V +++ ++ + +
Sbjct: 137 EHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYI 196
Query: 180 SASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLH----- 234
+ I RK+ ++ M + ++ Y
Sbjct: 197 LSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFL 256
Query: 235 ICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDL 288
+ + N + ++ + + TT +V+G +L
Sbjct: 257 VSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNL 310
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 61.4 bits (147), Expect = 1e-10
Identities = 37/215 (17%), Positives = 66/215 (30%), Gaps = 6/215 (2%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
DD I+V++ +K + L GH + + H ++S S D+T+R+W + C
Sbjct: 30 ADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTH 88
Query: 158 VLTGHN--HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKH 215
V GHN + + +V+ S D T+ VW L K++ P G+ H
Sbjct: 89 VFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK---LPKESSVPDHGEEHDYPLVFH 145
Query: 216 PIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAI 275
+ V + +Y S H
Sbjct: 146 TPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIY 205
Query: 276 VNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPH 310
+ T I+ + + +
Sbjct: 206 STIYDHERKRCISASMDTTIRIWDLENGELMYTLQ 240
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 54.1 bits (128), Expect = 2e-08
Identities = 11/137 (8%), Positives = 32/137 (23%), Gaps = 2/137 (1%)
Query: 58 CFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL 117
I + + + Y + K ++ + +
Sbjct: 218 SASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKF 277
Query: 118 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI-CVLTGHNHYVMCAQFHPTDD 176
H + + IL + + I+ +S + + + F
Sbjct: 278 SYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKG-KT 336
Query: 177 IVVSASLDQTIRVWDIS 193
+V + D + +
Sbjct: 337 LVAAVEKDGQSFLEILD 353
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.7 bits (101), Expect = 5e-05
Identities = 35/216 (16%), Positives = 68/216 (31%), Gaps = 47/216 (21%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
+ +I++ + + +W + + E + P FV + + +
Sbjct: 104 EYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMAS 163
Query: 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWI 136
+ D + VW+ Q KC++ L GH D I +T + HE
Sbjct: 164 VRTVSGHGNIVVSGSY-------DNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRC 216
Query: 137 LSASDDQTIRI---------------------------------------WYWQSRNCIC 157
+SAS D TIRI + +
Sbjct: 217 ISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRK 276
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
H + F+ +D+I+VS S + ++++
Sbjct: 277 FSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLR 311
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 61.8 bits (148), Expect = 7e-11
Identities = 12/185 (6%), Positives = 39/185 (21%), Gaps = 32/185 (17%)
Query: 17 FHPKRPWILSSLHNGVIQLWD-------YRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
F + + + D + + + G + +G
Sbjct: 186 FDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAG 245
Query: 70 GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF 129
+ + + + + I L +
Sbjct: 246 EYDL---------------------NDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVH 284
Query: 130 HHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 189
+ A + + + ++R +T + + + V+ D I
Sbjct: 285 GEFAAYYQGAPEKGVLLKYDVKTRK----VTEVKNNLTDLRLSADRKTVMVRKDDGKIYT 340
Query: 190 WDISG 194
+ +
Sbjct: 341 FPLEK 345
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 48.3 bits (113), Expect = 2e-06
Identities = 19/194 (9%), Positives = 33/194 (17%), Gaps = 14/194 (7%)
Query: 36 WDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKS 95
+ F G G + G K+ + + +
Sbjct: 135 ISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLY 194
Query: 96 VLGDDYKIKVWNYKQRKCIF-------TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
L + F + T + D
Sbjct: 195 YLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYK 254
Query: 149 YWQSRN-------CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA 201
N I L A + +D+ + V
Sbjct: 255 RSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK 314
Query: 202 PGMGKLVLSMKSKH 215
+ L LS K
Sbjct: 315 NNLTDLRLSADRKT 328
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 43.3 bits (100), Expect = 6e-05
Identities = 11/194 (5%), Positives = 36/194 (18%), Gaps = 6/194 (3%)
Query: 96 VLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN- 154
+ + + + + IR + + + + R
Sbjct: 19 AFVSRGQAFIQDVSGTYVL--KVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTG 76
Query: 155 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSK 214
+ V V A+ I D+ + + ++ +
Sbjct: 77 KAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDF-TI 135
Query: 215 HPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYA 274
++ T + + + + K
Sbjct: 136 SDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSH--DYAPAFDADSKNL 193
Query: 275 IVNGDHGIIRTLDL 288
+ + D
Sbjct: 194 YYLSYRSLDPSPDR 207
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 41.8 bits (96), Expect = 2e-04
Identities = 22/212 (10%), Positives = 40/212 (18%), Gaps = 33/212 (15%)
Query: 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT-LLEKFDEHEGPVRGICFHNQQPI 65
+ R++ + L Y T EKF+E+ G V +
Sbjct: 40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKF 99
Query: 66 FVSGGKMIVMAYQGCILESRNEPCLFRIKSVLG------------------------DDY 101
V + R +
Sbjct: 100 AVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQ 159
Query: 102 KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC------ 155
I V++ + RK + F + + S N
Sbjct: 160 AIHVYDMEGRKIFAAT-TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVS 218
Query: 156 -ICVLTGHNHYVMCAQFHPTDDIVVSASLDQT 186
V+ + P + D
Sbjct: 219 KPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLN 250
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 60.4 bits (144), Expect = 2e-10
Identities = 12/90 (13%), Positives = 32/90 (35%), Gaps = 2/90 (2%)
Query: 106 WNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNH- 164
N + + H + + + + + S D ++ +W + ++ H
Sbjct: 209 ANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHA 268
Query: 165 -YVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+ + + +VSA D I+ W++
Sbjct: 269 MSSVNSVIWLNETTIVSAGQDSNIKFWNVP 298
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 57.7 bits (137), Expect = 1e-09
Identities = 18/137 (13%), Positives = 34/137 (24%), Gaps = 2/137 (1%)
Query: 112 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT-GHNHYVMCAQ 170
GH I + + SA + I W + V H + +
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 62
Query: 171 FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPK 230
D+ + D ++V G + KL V C
Sbjct: 63 TTSKGDLFTVSW-DDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKH 121
Query: 231 HTLHICNRKMEPLCNIH 247
++ + E + +
Sbjct: 122 IAIYSHGKLTEVPISYN 138
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 50.4 bits (118), Expect = 2e-07
Identities = 25/230 (10%), Positives = 50/230 (21%), Gaps = 2/230 (0%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFV 67
+ + LS + S+ G I WD F D H + GI ++ +F
Sbjct: 12 NKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFT 71
Query: 68 SGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR-KCIFTLLGHLDYIRT 126
+ + + S + C + + T
Sbjct: 72 VSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLT 131
Query: 127 TFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQT 186
++ S+D+ Q +I A +
Sbjct: 132 EVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNG 191
Query: 187 IRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236
+ RK L+ + +P +
Sbjct: 192 AFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLAT 241
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 44.2 bits (102), Expect = 3e-05
Identities = 17/115 (14%), Positives = 30/115 (26%), Gaps = 3/115 (2%)
Query: 36 WDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKS 95
+ F R + ++ F + + P R+ +
Sbjct: 182 ITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLAT 241
Query: 96 VLGDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
D + VWN + I H + I+SA D I+ W
Sbjct: 242 G-SLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFW 295
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 43.8 bits (101), Expect = 4e-05
Identities = 20/233 (8%), Positives = 46/233 (19%), Gaps = 33/233 (14%)
Query: 50 HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK 109
H + + S + I W+
Sbjct: 11 HNKAITALSSSADGKTLFSAD----------------------------AEGHINSWDIS 42
Query: 110 QRKCIFTLL-GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMC 168
H I + + DD + S +
Sbjct: 43 TGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQP 102
Query: 169 AQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCN 228
+ D ++ + G + S + ++ +
Sbjct: 103 LGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNS----SCVALSNDKQFVAVGGQDS 158
Query: 229 PKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG 281
H + + + I + S A+ +G F+ T K + +
Sbjct: 159 KVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANN 211
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 39.2 bits (89), Expect = 0.001
Identities = 17/181 (9%), Positives = 49/181 (27%), Gaps = 3/181 (1%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM 75
+ + ++++ + + S GK+ +
Sbjct: 74 WDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEV 133
Query: 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPW 135
+ D + H I + F + +
Sbjct: 134 PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAF 193
Query: 136 ILSASDDQTIRIWYWQSRNCI---CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+++ + + + + + T H V C + P + + + SLD ++ VW++
Sbjct: 194 LVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNM 253
Query: 193 S 193
+
Sbjct: 254 N 254
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 59.1 bits (141), Expect = 6e-10
Identities = 22/213 (10%), Positives = 55/213 (25%), Gaps = 14/213 (6%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
+ T S + + I + +NG +Q+ + L F+ +
Sbjct: 177 VESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIR 235
Query: 62 QQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL 121
G + + F + + H
Sbjct: 236 SVKFSPQGSLLAIAHDSNSFGCITLYETEFG------ERIGSLSVPTHSSQASLGEFAHS 289
Query: 122 DYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQ----FHPTDDI 177
++ + F+ + SA D +R W +++ I L H + + D
Sbjct: 290 SWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDS 349
Query: 178 VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLS 210
+ + V + + + + + +
Sbjct: 350 LAEPGVF---DVKFLKKGWRSGMGADLNESLCC 379
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 56.8 bits (135), Expect = 4e-09
Identities = 17/114 (14%), Positives = 33/114 (28%), Gaps = 16/114 (14%)
Query: 119 GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC----ICVLTGHNHYVMC------ 168
H I + + + +S S D +++W + + + H
Sbjct: 12 AHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69
Query: 169 ---AQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVAPGMGKLVLSMKSKHPIW 218
+ +V + S + + I K V L+ S KH W
Sbjct: 70 QAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFW 123
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 54.1 bits (128), Expect = 3e-08
Identities = 17/178 (9%), Positives = 40/178 (22%), Gaps = 58/178 (32%)
Query: 50 HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK 109
H+ + + N VS D +KVW+ K
Sbjct: 13 HDADIFSVSACNSF--TVSCS----------------------------GDGYLKVWDNK 42
Query: 110 QRKCIFTL------------LGHLDYIRTT-FFHHEYPWILSASDDQTIRIWYWQSRNCI 156
L H+D ++ E + + S + + +
Sbjct: 43 LLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDET 102
Query: 157 CVLTGHNHYVMCAQFHPTD---------------DIVVSASLDQTIRVWDISGLRKKN 199
+ ++ + +V+ + T +W ++
Sbjct: 103 KKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADES 160
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.8 bits (96), Expect = 2e-04
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKN 199
H+ + VS S D ++VWD L +N
Sbjct: 9 AGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNEN 48
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 54.8 bits (130), Expect = 1e-08
Identities = 8/188 (4%), Positives = 35/188 (18%), Gaps = 9/188 (4%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
++ L++ + + + + + + +
Sbjct: 135 RQITMLAWARDGSKLYGLGRDLHVMDPEAGTLV---EDKPIQSWEAETYAQPDVLAVWNQ 191
Query: 70 GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF 129
+ + + + + + + +D +
Sbjct: 192 HESS---GVMATPFYTARKDIDPADP-TAYRTGLLTMDLETGEMAMREVRIMDVFYFSTA 247
Query: 130 HHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 189
+ + + + I + H V +
Sbjct: 248 VNPAKTRA-FGAYNVLESFDLEKNASIKRV-PLPHSYYSVNVSTDGSTVWLGGALGDLAA 305
Query: 190 WDISGLRK 197
+D L K
Sbjct: 306 YDAETLEK 313
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 52.8 bits (125), Expect = 6e-08
Identities = 17/187 (9%), Positives = 40/187 (21%), Gaps = 7/187 (3%)
Query: 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
+V + ++ + + +G + +
Sbjct: 146 QVYLMRAADDGSLYVAGPDIYKMDVKT---GKYTVALPLRNWNRKGYSAPDVLYFWPHQS 202
Query: 71 KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 130
+ I +++ Y + K K L + T
Sbjct: 203 PRHEFSMLYTIARFKDDKQDPATAD---LLYGYLSVDLKTGKTHTQEFADLTELYFTGLR 259
Query: 131 HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
+ + + R I +H C F D + + V+
Sbjct: 260 SPKDPNQIYGVLNRLAKYDLKQRKLIKAA-NLDHTYYCVAFDKKGDKLYLGGTFNDLAVF 318
Query: 191 DISGLRK 197
+ L K
Sbjct: 319 NPDTLEK 325
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 49.4 bits (116), Expect = 6e-07
Identities = 27/336 (8%), Positives = 76/336 (22%), Gaps = 64/336 (19%)
Query: 14 GLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD-EHEGPVRGICFH-NQQPIFVSGGK 71
G + +++ + + + + D +T+ + + + + +V
Sbjct: 1 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH 60
Query: 72 --------------------------------MIVMAYQGCILESRNEPCLFRIKSVLGD 99
++ G + + P +
Sbjct: 61 YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 120
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
+++V++ + + L + I ++ L
Sbjct: 121 PPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPD-IYKMDVKTGKYTVAL 179
Query: 160 TGHN-------------------------HYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194
N A+F +A L D+
Sbjct: 180 PLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKT 239
Query: 195 LRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKS 254
+ + + P Y ++ + + + +
Sbjct: 240 GKTHTQEFADLTELYFTGLRSPKDPN---QIYGVLNRLAKYDLKQRKLIKAANLDHTYYC 296
Query: 255 GAWDESGVFIYTTSNHIKYAIVNGDHG-IIRTLDLP 289
A+D+ G +Y A+ N D ++ + LP
Sbjct: 297 VAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 332
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 52.1 bits (123), Expect = 9e-08
Identities = 15/194 (7%), Positives = 46/194 (23%), Gaps = 3/194 (1%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIV 74
F +G + + E N G+++
Sbjct: 152 HIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW 211
Query: 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP 134
Y G I + + + + + + + + H R +
Sbjct: 212 PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRD 271
Query: 135 WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP--TDDIVVSASLDQTIRVWDI 192
+ + + + ++ + H + + ++ D+T+ + D
Sbjct: 272 EWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDA 330
Query: 193 SGLRKKNVAPGMGK 206
+ +G
Sbjct: 331 ESGEELRSVNQLGH 344
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 44.9 bits (105), Expect = 2e-05
Identities = 28/199 (14%), Positives = 55/199 (27%), Gaps = 11/199 (5%)
Query: 138 SASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 197
+ D I + S+ + V+ V ++ + ++ D I + D+
Sbjct: 37 TLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEP 95
Query: 198 KNVAPGMGKL----VLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVK 253
VA + V S K K +Y Y P+ + V
Sbjct: 96 TKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVD 155
Query: 254 SGAWDESG--VFIYTTSNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHV 311
+ + I + H ++ + + G + L + I V +
Sbjct: 156 TQTYHPEPRVAAIIASHEHPEFIVNVKETGKV----LLVNYKDIDNLTVTSIGAAPFLAD 211
Query: 312 LRIDPTEFKFKLALINHKY 330
D + F A N
Sbjct: 212 GGWDSSHRYFMTAANNSNK 230
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 38.4 bits (88), Expect = 0.002
Identities = 23/190 (12%), Positives = 52/190 (27%), Gaps = 22/190 (11%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM 75
S + V+ + ++ L + + + F++
Sbjct: 171 SHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNK 230
Query: 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPW 135
+ R S L D K + + + +T +
Sbjct: 231 VAVIDSKD--------RRLSALVDVGKTPHPG----RGANFVHPKYGPVWSTSHLGDGSI 278
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVV-------SASLDQTIR 188
L +D + + W+ + L G + + HP + A + Q++
Sbjct: 279 SLIGTDPKNHPQYAWK---KVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVA 335
Query: 189 VWDISGLRKK 198
V+D+ L K
Sbjct: 336 VFDLKNLDAK 345
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 41.1 bits (95), Expect = 3e-04
Identities = 11/228 (4%), Positives = 39/228 (17%), Gaps = 44/228 (19%)
Query: 10 ARVKGLSFHPKRPWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
RV + +L + + +
Sbjct: 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI---HPGAAATHYL 180
Query: 69 G---GKMIVMAY-----------------QGCILESRNEPCLFRIKSVLGDDYKIKVWNY 108
G + Q C ++ + +
Sbjct: 181 GSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPA 240
Query: 109 KQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTI-----------------RIWYWQ 151
+ G+ + F +++ +
Sbjct: 241 AGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVT 300
Query: 152 SRNCICVLT-GHNHYVMCAQFHP--TDDIVVSASLDQTIRVWDISGLR 196
+ + H D +++ + + ++D + +
Sbjct: 301 ASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Score = 39.4 bits (90), Expect = 0.001
Identities = 13/174 (7%), Positives = 37/174 (21%), Gaps = 8/174 (4%)
Query: 138 SASDDQTIRIWYWQSRNCICVL--TGHNHYVMCAQFHPTDDIV-VSASLDQTIRVWDISG 194
++ + Q I +W + + V P + V + + + I+
Sbjct: 9 ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAP 68
Query: 195 LRKKNVAPGMGKLV-----LSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHEN 249
L +S + L +
Sbjct: 69 DDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD 128
Query: 250 TRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYL 303
+ ++ + + P +T ++G ++
Sbjct: 129 GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHM 182
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Score = 37.5 bits (85), Expect = 0.004
Identities = 8/89 (8%), Positives = 18/89 (20%), Gaps = 2/89 (2%)
Query: 106 WNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY 165
+ I + T+ + + +
Sbjct: 187 TVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-D 245
Query: 166 VMCAQFHPTDD-IVVSASLDQTIRVWDIS 193
P + V+ S T+ V D +
Sbjct: 246 PAGIAVTPDGKKVYVALSFCNTVSVIDTA 274
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 641 | |||
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.98 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.97 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.97 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.97 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.96 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.96 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.96 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.96 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.96 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.95 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.95 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.94 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.94 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.93 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.93 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.92 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.91 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.91 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.89 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.89 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.89 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.88 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.88 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.87 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.85 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.83 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.81 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.79 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.79 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.78 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.74 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.73 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.67 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.66 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.64 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.62 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.58 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.53 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.46 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.42 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.26 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.22 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.21 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.2 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.14 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.1 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 98.95 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.78 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.71 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.64 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 98.6 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 98.57 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.54 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.53 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.45 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 98.43 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.39 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 98.38 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.23 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.02 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 97.96 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 97.89 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 97.87 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 97.81 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 97.76 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 97.64 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 97.28 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 97.24 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 96.85 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 96.48 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 96.48 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 95.92 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 95.9 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 95.74 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 95.5 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 95.36 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 94.7 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 94.41 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 93.21 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 93.18 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 92.81 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 92.47 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 91.8 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 91.14 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 90.77 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 90.71 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 90.39 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 89.52 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 89.08 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 87.9 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 87.32 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 86.54 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 85.55 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 83.72 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 83.09 |
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.8e-33 Score=280.41 Aligned_cols=283 Identities=20% Similarity=0.311 Sum_probs=244.6
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
.+|+||+++|++++|+|++++|++|+.||+|+|||+.+++.+..+..|.++|.+++|+|++.++++++
T Consensus 11 ~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~------------ 78 (317)
T d1vyhc1 11 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS------------ 78 (317)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEE------------
T ss_pred EEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeecccccccccc------------
Confidence 57899999999999999999999999999999999999999999999999999999999999999997
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h 162 (641)
.++.+.+|+....+....+.+|...+.++.|+|+++.+++++.|+.+++||+++++.+..+.+|
T Consensus 79 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 142 (317)
T d1vyhc1 79 ----------------ADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 142 (317)
T ss_dssp ----------------TTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred ----------------cccccccccccccccccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccC
Confidence 8999999999999998999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCc----------------eeeeeeeee
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPI----------------WKYCKPVKY 226 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v----------------~~~~~~l~s 226 (641)
...+.+++|+|++.++++++.|+.|++||+.+++....+.++...+.++...... ......+.+
T Consensus 143 ~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (317)
T d1vyhc1 143 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 222 (317)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEE
T ss_pred CCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEe
Confidence 9999999999999999999999999999999999888888776666543321110 000011567
Q ss_pred eCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecc---ccceEE--EEEcCc
Q psy9327 227 CNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTL---DLPIYI--TKIKGN 298 (641)
Q Consensus 227 ~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~---d~p~~~--~~~~g~ 298 (641)
++.|+.+++|| .+...+..+. +...|.+++|+|++.+|++++.++.+.+|+..++. +..+ ..++.. +..++.
T Consensus 223 ~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~ 302 (317)
T d1vyhc1 223 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP 302 (317)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSS
T ss_pred ccCCCEEEEEECCCCcEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCC
Confidence 78999999999 4556555554 47789999999999999999999999999987664 3333 334433 445678
Q ss_pred EEEEEeCCCCeEEEE
Q psy9327 299 QVYYLDRECSPHVLR 313 (641)
Q Consensus 299 ~v~~~~~dg~i~v~~ 313 (641)
.+++++.||.+++|+
T Consensus 303 ~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 303 YVVTGSVDQTVKVWE 317 (317)
T ss_dssp CEEEEETTSEEEEEC
T ss_pred EEEEEeCCCeEEEeC
Confidence 999999999999995
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.6e-32 Score=282.76 Aligned_cols=251 Identities=18% Similarity=0.223 Sum_probs=215.3
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccc--ccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLL--EKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l--~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
.+.|.+|++.|++++|+|+|++|++|+.||+|++||+.+++.. ..+..|.++|.+++|+|++.++++++.
T Consensus 51 ~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~-------- 122 (311)
T d1nr0a1 51 TEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGE-------- 122 (311)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEEC--------
T ss_pred eEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccccccccccccccCccccccccccccccccccc--------
Confidence 4678899999999999999999999999999999999887654 447789999999999999999998872
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCE-EEEEeCCCeEEEEECCCCeeEEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPW-ILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~-l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
+.+..++|||+++++...++.+|.+.|++++|+|++++ |++|+.|+.|++||++++++...
T Consensus 123 ------------------~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~ 184 (311)
T d1nr0a1 123 ------------------GRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKST 184 (311)
T ss_dssp ------------------CSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEE
T ss_pred ------------------cccccccccccccccccccccccccccccccccccceeeecccccccccccccccccccccc
Confidence 14567999999999999999999999999999999884 88999999999999999999999
Q ss_pred EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~ 238 (641)
+.+|...|+++.|+|+++++++++.|+.|++||++++.....+....
T Consensus 185 ~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~--------------------------------- 231 (311)
T d1nr0a1 185 FGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDS--------------------------------- 231 (311)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTT---------------------------------
T ss_pred cccccccccccccCccccccccccccccccccccccccccccccccc---------------------------------
Confidence 99999999999999999999999999999999999877665543210
Q ss_pred CCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecccc------ceEEEEEcCcEEEEEeCCCCeEE
Q psy9327 239 KMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDL------PIYITKIKGNQVYYLDRECSPHV 311 (641)
Q Consensus 239 ~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~------p~~~~~~~g~~v~~~~~dg~i~v 311 (641)
.....+...|.+++|+|+|.+|++|+.|+.+.+|+.+++. ++.++. ........++.+++++.||.+++
T Consensus 232 ----~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~~l~s~s~dG~i~~ 307 (311)
T d1nr0a1 232 ----LKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINF 307 (311)
T ss_dssp ----SSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEE
T ss_pred ----cccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEecCCEEEEEECCCEEEE
Confidence 0111245789999999999999999999999999988775 344432 23335567888999999999999
Q ss_pred EEeC
Q psy9327 312 LRID 315 (641)
Q Consensus 312 ~~~~ 315 (641)
|+.+
T Consensus 308 wd~d 311 (311)
T d1nr0a1 308 VNPE 311 (311)
T ss_dssp EETT
T ss_pred EeCC
Confidence 9864
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-32 Score=281.34 Aligned_cols=274 Identities=12% Similarity=0.174 Sum_probs=228.0
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccc-----cccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLE-----KFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~-----~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+|.+.|.+++|+|+|++|++|+ ||.|+|||+.++.... ....|.++|.+++|+|++++|++|+
T Consensus 49 ~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~----------- 116 (337)
T d1gxra_ 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG----------- 116 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE-----------
T ss_pred CCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEee-----------
Confidence 7999999999999999999987 8999999997654322 2346899999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCC--eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQR--KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~--~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l 159 (641)
.|++|++||+... +....+..|...+.+++|+|++.++++++.|+.|++||+.++++....
T Consensus 117 -----------------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~ 179 (337)
T d1gxra_ 117 -----------------EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF 179 (337)
T ss_dssp -----------------SSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred -----------------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999998754 566778899999999999999999999999999999999999999999
Q ss_pred ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC-
Q psy9327 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR- 238 (641)
Q Consensus 160 ~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~- 238 (641)
.+|...|.+++|++++..+++++.|+++++||+++++...... +...+.++.. +|-. ..+++++.++.+++||.
T Consensus 180 ~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~-~~~~i~~l~~-~~~~---~~l~~~~~d~~i~i~d~~ 254 (337)
T d1gxra_ 180 QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGY-CPTG---EWLAVGMESSNVEVLHVN 254 (337)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEE-CTTS---SEEEEEETTSCEEEEETT
T ss_pred cccccccccccccccccccccccccccccccccccceeecccc-cccceEEEEE-cccc---cccceecccccccccccc
Confidence 9999999999999999999999999999999999988776654 3444544331 1111 11567789999999994
Q ss_pred CCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecc--ccceEE--EEEcCcEEEEEeCCCCeEEEE
Q psy9327 239 KMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTL--DLPIYI--TKIKGNQVYYLDRECSPHVLR 313 (641)
Q Consensus 239 ~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~--d~p~~~--~~~~g~~v~~~~~dg~i~v~~ 313 (641)
.........+...|.+++|+|+|.++++++.|+.+.+|+..++. +... ..++.. +..++..+++++.||.+++|+
T Consensus 255 ~~~~~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~s~D~~I~vWd 334 (337)
T d1gxra_ 255 KPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp SSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred ccccccccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 44555555668899999999999999999999999999987764 3322 223332 445678999999999999998
Q ss_pred e
Q psy9327 314 I 314 (641)
Q Consensus 314 ~ 314 (641)
+
T Consensus 335 l 335 (337)
T d1gxra_ 335 V 335 (337)
T ss_dssp E
T ss_pred E
Confidence 6
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=4.4e-31 Score=270.27 Aligned_cols=271 Identities=14% Similarity=0.156 Sum_probs=219.6
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEE-eeece-
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM-AYQGC- 80 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~-~~~~~- 80 (641)
++|+||.++|++++|+|++++|++|+.||+|+|||+.+++.+..+..|..+|.+++|+|++.++++|+..... .+...
T Consensus 49 ~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~ 128 (340)
T d1tbga_ 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSS
T ss_pred EEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeecccccc
Confidence 5789999999999999999999999999999999999999999999999999999999999999998743221 11100
Q ss_pred -------eeecccCC--------cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeE
Q psy9327 81 -------ILESRNEP--------CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTI 145 (641)
Q Consensus 81 -------~~~~~~~~--------~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I 145 (641)
......+. ...........|.....|+............+...+....+.+.+.++++|+.|+.|
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v 208 (340)
T d1tbga_ 129 REGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASA 208 (340)
T ss_dssp SCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTEE
T ss_pred cccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCceE
Confidence 00000000 111233456778888888888888888888888999999999999999999999999
Q ss_pred EEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC--CCceeeecccCCCceeeeee
Q psy9327 146 RIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG--MGKLVLSMKSKHPIWKYCKP 223 (641)
Q Consensus 146 ~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~--~~~~v~s~~~~~~v~~~~~~ 223 (641)
++||+++++++.++.+|.+.|++++|+|++.+|++|+.|++|++||++.......... +...+.++.. +|-. ..
T Consensus 209 ~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~-s~~~---~~ 284 (340)
T d1tbga_ 209 KLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSF-SKSG---RL 284 (340)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE-CSSS---CE
T ss_pred EEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEE-CCCC---CE
Confidence 9999999999999999999999999999999999999999999999998887665542 2233333221 1111 11
Q ss_pred eeeeCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 224 VKYCNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 224 l~s~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
+++++.++.|++|| .+++.+..+. +..+|.+++|+|++.+|++|+.|+.+.+|+
T Consensus 285 l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 285 LLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence 67788999999999 5667777776 478999999999999999999998888885
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.98 E-value=5e-30 Score=269.01 Aligned_cols=277 Identities=18% Similarity=0.259 Sum_probs=220.9
Q ss_pred ccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc------------------ccccCeEEEEEeCCCCEEE
Q psy9327 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD------------------EHEGPVRGICFHNQQPIFV 67 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~------------------~h~~~V~~i~fsp~~~~l~ 67 (641)
.+|++.|+|++|+|||++||+|+ ||+|+|||+.+++.+.++. .|...|.+++|+|++++|+
T Consensus 59 ~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~ 137 (388)
T d1erja_ 59 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 137 (388)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred CCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcce
Confidence 36999999999999999999986 8999999999887766553 3566799999999999999
Q ss_pred EeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEE
Q psy9327 68 SGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 147 (641)
Q Consensus 68 sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~v 147 (641)
+|+ .||.|++||..+++.+..+.+|.+.|.+++|++++..+++|+.++.+++
T Consensus 138 s~~----------------------------~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~ 189 (388)
T d1erja_ 138 TGA----------------------------EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRI 189 (388)
T ss_dssp EEE----------------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ecc----------------------------cccccccccccccccccccccccccccccccccccccccccccceeeee
Confidence 998 9999999999999999999999999999999999999999999999999
Q ss_pred EECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc-------CCCceeeecccCCCceee
Q psy9327 148 WYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP-------GMGKLVLSMKSKHPIWKY 220 (641)
Q Consensus 148 Wd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~-------~~~~~v~s~~~~~~v~~~ 220 (641)
||.++..+......+...+....+.+++.+|++|+.|+.|++||.+++.....+. +|...+.++... |-
T Consensus 190 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s-~~--- 265 (388)
T d1erja_ 190 WDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFT-RD--- 265 (388)
T ss_dssp EETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEEC-TT---
T ss_pred eeccccccccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEEC-CC---
Confidence 9999999888877665555444444478999999999999999999887766553 233344443221 10
Q ss_pred eeeeeeeCCCeeEEEecCC-Ccc-------------eeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eec
Q psy9327 221 CKPVKYCNPKHTLHICNRK-MEP-------------LCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRT 285 (641)
Q Consensus 221 ~~~l~s~~~d~~I~i~d~~-~~~-------------~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~ 285 (641)
...+++++.|+.+++||.. ... .....+...|.+++|+|+|.+|++|+.++.+.+|+..++. +..
T Consensus 266 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 345 (388)
T d1erja_ 266 GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLM 345 (388)
T ss_dssp SSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CCEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEE
Confidence 0126788899999999932 111 1222346789999999999999999999999999987764 333
Q ss_pred c---ccceEEE--------EEcCcEEEEEeCCCCeEEEEeC
Q psy9327 286 L---DLPIYIT--------KIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 286 ~---d~p~~~~--------~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
+ ..++... ..++..+++++.||.|++|++.
T Consensus 346 l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~ 386 (388)
T d1erja_ 346 LQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386 (388)
T ss_dssp EECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred EeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence 3 2233322 2357889999999999999975
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.97 E-value=7.8e-30 Score=268.39 Aligned_cols=247 Identities=16% Similarity=0.243 Sum_probs=190.3
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc--ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT--LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~--~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
+.++|+|++|+|+|.+||+|+.||.|+|||..+++ .+..+++|.++|.+++|+|++++|++|+
T Consensus 6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s--------------- 70 (371)
T d1k8kc_ 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG--------------- 70 (371)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEE---------------
T ss_pred CCCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEE---------------
Confidence 35889999999999999999999999999998765 5677889999999999999999999998
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCee--EEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe----eEEEE
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN----CICVL 159 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~--~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~----~i~~l 159 (641)
.|++|++||+.++.. ...+.+|...|.+++|+|+++.|++|+.|++|++|++.... .....
T Consensus 71 -------------~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~ 137 (371)
T d1k8kc_ 71 -------------TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIK 137 (371)
T ss_dssp -------------TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEEC
T ss_pred -------------CCCeEEEEeecccccccccccccccccccccccccccccceeecccCcceeeeeecccccccccccc
Confidence 999999999988764 45567899999999999999999999999999999987654 23445
Q ss_pred ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC--------CCceeeec-ccCCCceeeee-----eee
Q psy9327 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG--------MGKLVLSM-KSKHPIWKYCK-----PVK 225 (641)
Q Consensus 160 ~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~--------~~~~v~s~-~~~~~v~~~~~-----~l~ 225 (641)
.+|...|.+++|+|++.+|++|+.|++|++||............ .+..+... .....+..+++ .++
T Consensus 138 ~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 217 (371)
T d1k8kc_ 138 KPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVA 217 (371)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEE
T ss_pred cccccccccccccccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeeccccccc
Confidence 68999999999999999999999999999999875432211110 01111110 01111222222 167
Q ss_pred eeCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCe-EEEEEcCCCCe
Q psy9327 226 YCNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHI-KYAIVNGDHGI 282 (641)
Q Consensus 226 s~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~-k~~l~~~~~g~ 282 (641)
+++.|+.|.+|| .....+..+. +..+|.+++|+|+|.++++|+++. .++.|+...+.
T Consensus 218 s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~s~~fs~d~~~la~g~d~~~~~~~~~~~~~~ 277 (371)
T d1k8kc_ 218 WVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGK 277 (371)
T ss_dssp EEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTE
T ss_pred ccccCCcceEEeeecccceeeeecccccceeeeecCCCCEEEEEcCCceEEEEeeCCCce
Confidence 788999999999 4455555554 467899999999999998876432 34445444433
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=6e-29 Score=257.62 Aligned_cols=239 Identities=13% Similarity=0.161 Sum_probs=208.1
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC--cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN--TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~--~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
..+|.+.|.+++|+|++++|++|+.||+|++||+... +....+..|...|.+++|+|++.++++++
T Consensus 93 ~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~------------ 160 (337)
T d1gxra_ 93 CLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCC------------ 160 (337)
T ss_dssp CSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEE------------
T ss_pred ecCCCCcEEEEEEcCCCCEEEEeecccccccccccccccccccccccccccccccccccccccccccc------------
Confidence 4579999999999999999999999999999998744 45566778999999999999999999997
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h 162 (641)
.|+.|++||+.++++.....+|.+.|.+++|++++..+++|+.|+.|++||+++++.+..+. |
T Consensus 161 ----------------~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~-~ 223 (337)
T d1gxra_ 161 ----------------SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-F 223 (337)
T ss_dssp ----------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-C
T ss_pred ----------------ccccccccccccccccccccccccccccccccccccccccccccccccccccccceeecccc-c
Confidence 99999999999999999999999999999999999999999999999999999999887775 8
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCc
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKME 241 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~ 241 (641)
...|.+++|+|++..+++|+.|+.+++||+++.+.... ..|...+.++... |-- ..+++++.|+.|++|| ..+.
T Consensus 224 ~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~i~~v~~s-~~g---~~l~s~s~Dg~i~iwd~~~~~ 298 (337)
T d1gxra_ 224 TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL-HLHESCVLSLKFA-YCG---KWFVSTGKDNLLNAWRTPYGA 298 (337)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEE-CCCSSCEEEEEEC-TTS---SEEEEEETTSEEEEEETTTCC
T ss_pred ccceEEEEEcccccccceeccccccccccccccccccc-cccccccceEEEC-CCC---CEEEEEeCCCeEEEEECCCCC
Confidence 89999999999999999999999999999998876543 3455555553321 111 1166788999999999 5667
Q ss_pred ceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 242 PLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 242 ~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
.+....+...|.+++|+|++.+|++++.|+.+.+|+
T Consensus 299 ~~~~~~~~~~v~~~~~s~d~~~l~t~s~D~~I~vWd 334 (337)
T d1gxra_ 299 SIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp EEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred EEEEccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 777888889999999999999999998888888875
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.97 E-value=2e-28 Score=247.92 Aligned_cols=268 Identities=10% Similarity=0.058 Sum_probs=204.7
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc-ccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD-EHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~-~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
+.+.++||.++|++++|+|++++|++|+.||+|++||+.+++.+..+. .|..+|.+++|+|++.+++++.+.....|+.
T Consensus 4 ~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~~~~~~d~~v~~~~~ 83 (299)
T d1nr0a2 4 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPA 83 (299)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECS
T ss_pred cceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccceeecccceeeEEEecc
Confidence 357899999999999999999999999999999999999998888774 6999999999999999888887555544431
Q ss_pred ee-----------------eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC
Q psy9327 80 CI-----------------LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD 142 (641)
Q Consensus 80 ~~-----------------~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D 142 (641)
.. ......++. ..++++.++.+.+|+.. +..... ....+.+++|+|++.++++|+.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g--~~~~~~~~~~i~~~~~~--~~~~~~--~~~~~~~~~~s~~~~~l~~g~~d 157 (299)
T d1nr0a2 84 GGSGVDSSKAVANKLSSQPLGLAVSADG--DIAVAACYKHIAIYSHG--KLTEVP--ISYNSSCVALSNDKQFVAVGGQD 157 (299)
T ss_dssp SSSSSCTTSCCEEECSSCEEEEEECTTS--SCEEEEESSEEEEEETT--EEEEEE--CSSCEEEEEECTTSCEEEEEETT
T ss_pred CCcccccccccccccccccccccccccc--ccccccccccccccccc--cccccc--ccccccccccccccccccccccc
Confidence 10 000111111 12344566789999854 333333 34567889999999999999999
Q ss_pred CeEEEEECCCCeeEE-EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeee
Q psy9327 143 QTIRIWYWQSRNCIC-VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYC 221 (641)
Q Consensus 143 g~I~vWd~~~~~~i~-~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~ 221 (641)
+.|++||+++++... ....|...|++++|+|++.++++++.|+.|++||+.++.........
T Consensus 158 g~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~----------------- 220 (299)
T d1nr0a2 158 SKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSW----------------- 220 (299)
T ss_dssp SEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCC-----------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----------------
Confidence 999999998887543 34579999999999999999999999999999999875543322110
Q ss_pred eeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe---Eecc----ccceE-EE
Q psy9327 222 KPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI---IRTL----DLPIY-IT 293 (641)
Q Consensus 222 ~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~---I~~~----d~p~~-~~ 293 (641)
..+..+|.+++|+|+|.++++++.|+.+.+|+.+.+. +... ..++. ..
T Consensus 221 ------------------------~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~ 276 (299)
T d1nr0a2 221 ------------------------TFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVI 276 (299)
T ss_dssp ------------------------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEE
T ss_pred ------------------------cccccccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEE
Confidence 0135678999999999999999999999999866542 2211 11222 23
Q ss_pred EEcCcEEEEEeCCCCeEEEEeC
Q psy9327 294 KIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 294 ~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
..++..+++++.|+.+++|++.
T Consensus 277 ~~~~~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 277 WLNETTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp EEETTEEEEEETTSCEEEEECC
T ss_pred ECCCCEEEEEeCCCEEEEEecc
Confidence 4567899999999999999873
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=1.6e-27 Score=243.87 Aligned_cols=301 Identities=18% Similarity=0.292 Sum_probs=221.1
Q ss_pred eeeccCCCCe-EEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEece-eeEEeeec-
Q psy9327 3 TKFETKSARV-KGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK-MIVMAYQG- 79 (641)
Q Consensus 3 ~~~~~H~~~V-~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~-~~~~~~~~- 79 (641)
.+|+||.+.| +|++| ++++|++|+.||+|+|||+.+++.+.++.+|.++|.+++|+|++ +|++|+. ..+..|+.
T Consensus 6 ~tL~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~~-~l~s~s~D~~i~iw~~~ 82 (355)
T d1nexb2 6 TTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIK 82 (355)
T ss_dssp EEEECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETTT-EEEEEETTCCEEEEETT
T ss_pred EEECCcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCCC-EEEEEeccccccccccc
Confidence 5799999886 55555 67899999999999999999999999999999999999999865 6777763 22333321
Q ss_pred ---eeee-----------cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE-----------------------ccCCC
Q psy9327 80 ---CILE-----------SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL-----------------------LGHLD 122 (641)
Q Consensus 80 ---~~~~-----------~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~-----------------------~~h~~ 122 (641)
.... ...........++++.|+.|++||+.++...... ..|..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (355)
T d1nexb2 83 KGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA 162 (355)
T ss_dssp TTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSS
T ss_pred ccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeeccc
Confidence 0000 0111123456778899999999999876543222 22333
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 123 ~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
.+. .+.+++.++++++.|+.|++||.++++.+....++...+.++.|+|++..+++++.|++|++||.+++.....+.
T Consensus 163 ~v~--~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~ 240 (355)
T d1nexb2 163 SVR--TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ 240 (355)
T ss_dssp CEE--EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred ccc--ccccccceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeeccccccccccc
Confidence 443 455678899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC-CCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCC
Q psy9327 203 GMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR-KMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG 281 (641)
Q Consensus 203 ~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~-~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g 281 (641)
+|...+.++..... .+++++.|+.|++||. +.......++.......++++++.++++|+ |+.+.+|+.++|
T Consensus 241 ~h~~~v~~~~~~~~------~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~-d~~i~vwd~~tg 313 (355)
T d1nexb2 241 GHTALVGLLRLSDK------FLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSG 313 (355)
T ss_dssp CCSSCCCEEEECSS------EEEEECTTSEEEEEETTTCCEEEEEECTTCCCCCEEEECSSEEEEEE-TTEEEEEETTTC
T ss_pred cccccccccccccc------eeeeeecccccccccccccceecccccCCceEEEEEcCCCCEEEEEe-CCEEEEEECCCC
Confidence 88877766544322 2678889999999994 444444444444444456777888777765 789999998877
Q ss_pred eE-ec-cc---cceEEEEEcC-cEEEEEeCCCCeEEEEeC
Q psy9327 282 II-RT-LD---LPIYITKIKG-NQVYYLDRECSPHVLRID 315 (641)
Q Consensus 282 ~I-~~-~d---~p~~~~~~~g-~~v~~~~~dg~i~v~~~~ 315 (641)
.. +. +. .++.....++ ..+.+++.||++++|.++
T Consensus 314 ~~~~~~~~~~~~~V~~v~~~~~~~~~~~s~dg~~~l~~~d 353 (355)
T d1nexb2 314 KLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEILD 353 (355)
T ss_dssp CBCCSCTTTTCSEEEEEEEETTEEEEEEESSSCEEEEEEE
T ss_pred CEEEEEecCCCCCEEEEEEcCCeEEEEEECCCcEEEEEEe
Confidence 53 32 21 2343333344 455667899999888765
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.96 E-value=1.8e-28 Score=252.17 Aligned_cols=241 Identities=14% Similarity=0.143 Sum_probs=203.9
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeeccc
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRN 86 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~ 86 (641)
.+.+.+..++++|+|+.|+.++ ++.|.+||+.+++....+.+|.++|++++|+|++++|++|+
T Consensus 15 ~~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~---------------- 77 (311)
T d1nr0a1 15 TARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGD---------------- 77 (311)
T ss_dssp CCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEE----------------
T ss_pred CCCCCeEEEEEcCCCCEEEEEe-CCEEEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccc----------------
Confidence 3456677899999999999886 56799999999999999999999999999999999999998
Q ss_pred CCcceeeEEEeeCCCeEEEEECCCCee--EEEEccCCCCeEEEEEccCCCEEEEEeCC--CeEEEEECCCCeeEEEEccC
Q psy9327 87 EPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFHHEYPWILSASDD--QTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 87 ~~~~~~~~~~~s~Dg~I~vWD~~t~~~--~~~~~~h~~~V~~v~fsp~~~~l~sgs~D--g~I~vWd~~~~~~i~~l~~h 162 (641)
.||+|++||+.+++. ...+.+|.++|.+++|+|+++++++++.+ ..+++|++++++...++.+|
T Consensus 78 ------------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h 145 (311)
T d1nr0a1 78 ------------VHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQ 145 (311)
T ss_dssp ------------TTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCC
T ss_pred ------------cCceEeeeeeeccccccccccccccCcccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999988764 35688899999999999999999999864 56999999999999999999
Q ss_pred CCCEEEEEEecCCC-EEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCc
Q psy9327 163 NHYVMCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKME 241 (641)
Q Consensus 163 ~~~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~ 241 (641)
.+.|++++|+|+++ .+++|+.|++|++||+++++......+
T Consensus 146 ~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~-------------------------------------- 187 (311)
T d1nr0a1 146 ARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGE-------------------------------------- 187 (311)
T ss_dssp SSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECC--------------------------------------
T ss_pred ccccccccccccceeeeccccccccccccccccccccccccc--------------------------------------
Confidence 99999999999987 588999999999999998665544332
Q ss_pred ceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecccc----------ceEE--EEEcCcEEEEEeCCCC
Q psy9327 242 PLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDL----------PIYI--TKIKGNQVYYLDRECS 308 (641)
Q Consensus 242 ~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~----------p~~~--~~~~g~~v~~~~~dg~ 308 (641)
+..+|.+++|+|++.++++++.++.+.+|+..++. +..++. ++.. +..++..+++++.||.
T Consensus 188 ------~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~ 261 (311)
T d1nr0a1 188 ------HTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKT 261 (311)
T ss_dssp ------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ------ccccccccccCccccccccccccccccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCe
Confidence 24678889999999999999999999999877654 333321 2332 3456899999999999
Q ss_pred eEEEEeCCcchh
Q psy9327 309 PHVLRIDPTEFK 320 (641)
Q Consensus 309 i~v~~~~~~~~~ 320 (641)
+++|+.++.+..
T Consensus 262 v~iwd~~t~~~~ 273 (311)
T d1nr0a1 262 IKIWNVATLKVE 273 (311)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEECCCCcEE
Confidence 999998876543
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=2.7e-27 Score=240.87 Aligned_cols=264 Identities=20% Similarity=0.273 Sum_probs=203.2
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceee-EEeee--
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMI-VMAYQ-- 78 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~-~~~~~-- 78 (641)
.+.|+||.+.|.+ +++++|++|+||+.||+|+|||+.+++++.++.+|.++|.+++|+|+ ++++|+... ...+.
T Consensus 9 ~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~~~~~ 85 (342)
T d2ovrb2 9 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAE 85 (342)
T ss_dssp CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEETTSCEEEEETT
T ss_pred CEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCC--ccccceecccccccccc
Confidence 4679999999876 47778999999999999999999999999999999999999999975 788876211 11110
Q ss_pred -------------------------------ceeeeccc------------------CCcceeeEEEeeCCCeEEEEECC
Q psy9327 79 -------------------------------GCILESRN------------------EPCLFRIKSVLGDDYKIKVWNYK 109 (641)
Q Consensus 79 -------------------------------~~~~~~~~------------------~~~~~~~~~~~s~Dg~I~vWD~~ 109 (641)
+.+..... ........++++.|+.|++||..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~~ 165 (342)
T d2ovrb2 86 TGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPE 165 (342)
T ss_dssp TTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGG
T ss_pred cccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEEEeecc
Confidence 00000000 00112245578899999999999
Q ss_pred CCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEE
Q psy9327 110 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 189 (641)
Q Consensus 110 t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~I 189 (641)
..+.+..+.+|...+..+.+ ++.++++|+.|++|++||++.++++..+.+|...+.++.++ ++++++|+.|++|++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~--~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~s~d~~i~i 241 (342)
T d2ovrb2 166 TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKI 241 (342)
T ss_dssp GTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEE
T ss_pred cceeeEEEcCcccccccccC--CCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecC--CCEEEEEcCCCEEEE
Confidence 99999999999887766554 67889999999999999999999999999999999988776 569999999999999
Q ss_pred EecCCCceeeeccCC---CceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeec------CCcceEEEEEcC
Q psy9327 190 WDISGLRKKNVAPGM---GKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIH------ENTRVKSGAWDE 259 (641)
Q Consensus 190 WD~~~~~~~~~~~~~---~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~------~~~~I~sla~~p 259 (641)
||....+....+.++ ...+.++..... .+++++.|+.|++|| .+++.+..+. +...|.+++|+|
T Consensus 242 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~ 315 (342)
T d2ovrb2 242 WDIKTGQCLQTLQGPNKHQSAVTCLQFNKN------FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASN 315 (342)
T ss_dssp EETTTCCEEEEECSTTSCSSCEEEEEECSS------EEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECS
T ss_pred EecccccccccccccceeeeceeecccCCC------eeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECC
Confidence 999988877766543 233333222111 267788999999999 5566665543 356799999999
Q ss_pred CccEEEEecCCe----EEEEEcC
Q psy9327 260 SGVFIYTTSNHI----KYAIVNG 278 (641)
Q Consensus 260 ~g~~L~t~s~~~----k~~l~~~ 278 (641)
++.++++|+.+| ++.+|+-
T Consensus 316 ~~~~la~g~~dGt~~~~l~~~Df 338 (342)
T d2ovrb2 316 TKLVCAVGSRNGTEETKLLVLDF 338 (342)
T ss_dssp SEEEEEEECSSSSSCCEEEEEEC
T ss_pred CCCEEEEEeCCCCCeeEEEEEeC
Confidence 999999988664 4666654
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.96 E-value=4.7e-27 Score=236.01 Aligned_cols=245 Identities=22% Similarity=0.375 Sum_probs=219.3
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
++.+|++|.+.|.+++|+|++.++++++.++.+..|+....+....+..|...+.++.|+|++..+++++
T Consensus 51 ~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 120 (317)
T d1vyhc1 51 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS---------- 120 (317)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEE----------
T ss_pred EEEEEeCCCCcEEEEeeecccccccccccccccccccccccccccccccccccceeeeccCCCceEEeec----------
Confidence 3578899999999999999999999999999999999998888888889999999999999999999998
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~ 160 (641)
.|+.+++||+++++.+..+.+|...+.+++|+|++.+|++|+.|+.|++|+..+++++..+.
T Consensus 121 ------------------~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~ 182 (317)
T d1vyhc1 121 ------------------RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 182 (317)
T ss_dssp ------------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred ------------------cCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEEecCC--------------------CEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceee
Q psy9327 161 GHNHYVMCAQFHPTD--------------------DIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKY 220 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g--------------------~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~ 220 (641)
+|...+.++.|+|++ ..+++++.|++|++||.++++.+..+.+|...+.++... |-.
T Consensus 183 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~-- 259 (317)
T d1vyhc1 183 EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH-SGG-- 259 (317)
T ss_dssp CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEC-SSS--
T ss_pred cCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEC-CCC--
Confidence 999999999998753 468999999999999999999999988887777664422 111
Q ss_pred eeeeeeeCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 221 CKPVKYCNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 221 ~~~l~s~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
.-+++++.|+.|++|| .+.+.+..+. +..+|++++|+|++.+|++++.|+.+.+|+
T Consensus 260 -~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 260 -KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp -SCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred -CEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence 1167788999999999 5566777765 478999999999999999999998888884
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=1.1e-26 Score=239.87 Aligned_cols=246 Identities=13% Similarity=0.228 Sum_probs=194.9
Q ss_pred ceeeccC-CCCeEEEEEcc--CCCeEEEEeCCCcEEEEECccCccccc--------ccccccCeEEEEEeCCCCEEEEec
Q psy9327 2 LTKFETK-SARVKGLSFHP--KRPWILSSLHNGVIQLWDYRMNTLLEK--------FDEHEGPVRGICFHNQQPIFVSGG 70 (641)
Q Consensus 2 l~~~~~H-~~~V~~l~fsp--dg~~Lasg~~dg~I~iWD~~~~~~l~~--------~~~h~~~V~~i~fsp~~~~l~sgs 70 (641)
+..+.+| ...|++++|+| ++.+|++|+.||+|+|||+..++.... +..|.++|.+++|++++..+++++
T Consensus 55 ~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~ 134 (325)
T d1pgua1 55 VVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVG 134 (325)
T ss_dssp EEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred eEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceee
Confidence 3467777 46899999998 567999999999999999987655443 345788999999999999988775
Q ss_pred eeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCE-EEEEeCCCeEEEEE
Q psy9327 71 KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPW-ILSASDDQTIRIWY 149 (641)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~-l~sgs~Dg~I~vWd 149 (641)
. +.++.+++|++++++++..+.+|...|.+++|+|++++ +++++.|+.|++||
T Consensus 135 ~--------------------------~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d 188 (325)
T d1pgua1 135 E--------------------------GRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQ 188 (325)
T ss_dssp C--------------------------CSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEE
T ss_pred c--------------------------cccceEEEEeecccccceeeeecccccccccccccccceEEEeeccccccccc
Confidence 1 25788999999999999999999999999999999875 67899999999999
Q ss_pred CCCCeeEEEE---ccCCCCEEEEEEecC-CCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeee
Q psy9327 150 WQSRNCICVL---TGHNHYVMCAQFHPT-DDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVK 225 (641)
Q Consensus 150 ~~~~~~i~~l---~~h~~~V~sl~fsp~-g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~ 225 (641)
..+.+....+ .+|...|++++|+|+ +.++++++.|+.|++||+++++....+.+|...+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v----------------- 251 (325)
T d1pgua1 189 GPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPV----------------- 251 (325)
T ss_dssp TTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCC-----------------
T ss_pred ccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeecccccccccccccccc-----------------
Confidence 9988766655 467788999999996 6899999999999999999988777776543222
Q ss_pred eeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecccc--------ceEEEEEc
Q psy9327 226 YCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDL--------PIYITKIK 296 (641)
Q Consensus 226 s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~--------p~~~~~~~ 296 (641)
...+.+++| |+|.+|++++.|+.+.+|+.+++. ++.+.. .+......
T Consensus 252 -----------------------~~~~~s~~~-~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (325)
T d1pgua1 252 -----------------------QGGIFALSW-LDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATG 307 (325)
T ss_dssp -----------------------CSCEEEEEE-SSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEE
T ss_pred -----------------------ccceeeeec-cCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECC
Confidence 122334445 467888888889999999877665 333321 12233345
Q ss_pred CcEEEEEeCCCCeEEEEe
Q psy9327 297 GNQVYYLDRECSPHVLRI 314 (641)
Q Consensus 297 g~~v~~~~~dg~i~v~~~ 314 (641)
+..+++++.||.+++|++
T Consensus 308 ~~~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 308 NGRIISLSLDGTLNFYEL 325 (325)
T ss_dssp TTEEEEEETTSCEEEEET
T ss_pred CCEEEEEECCCEEEEEEC
Confidence 668899999999999974
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.95 E-value=1e-26 Score=244.32 Aligned_cols=203 Identities=12% Similarity=0.083 Sum_probs=168.6
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc--cccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL--LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~--l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
+..|++|.++|++++|+|++++|++|+.||+|++||+.+++. ...+..|..+|.+++|+|++++|++|+
T Consensus 44 ~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s--------- 114 (371)
T d1k8kc_ 44 VHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGS--------- 114 (371)
T ss_dssp EEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEE---------
T ss_pred EEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccccccccccccccccccccccccccccceeec---------
Confidence 467899999999999999999999999999999999987653 444567899999999999999999998
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCee----EEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCC---
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC----IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS--- 152 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~----~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~--- 152 (641)
.|++|++|++..... ......|.+.|.+++|+|++.+|++|+.|++|++||...
T Consensus 115 -------------------~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~ 175 (371)
T d1k8kc_ 115 -------------------GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEV 175 (371)
T ss_dssp -------------------TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTT
T ss_pred -------------------ccCcceeeeeecccccccccccccccccccccccccccccceeccccCcEEEEEeeccCcc
Confidence 999999999876542 344567999999999999999999999999999999754
Q ss_pred ---------------CeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCc
Q psy9327 153 ---------------RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPI 217 (641)
Q Consensus 153 ---------------~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v 217 (641)
+..+....+|...|.+++|+|+++.|++++.|++|++||+++++....+.++...+.++....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~s~~fs~-- 253 (371)
T d1k8kc_ 176 EERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFIT-- 253 (371)
T ss_dssp SCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEE--
T ss_pred ccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccceeeeecccccceeeeecC--
Confidence 245677788999999999999999999999999999999999998888887777776644211
Q ss_pred eeeeeeeeeeCCCeeEEEec
Q psy9327 218 WKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 218 ~~~~~~l~s~~~d~~I~i~d 237 (641)
...+.+++.|+.+.+|+
T Consensus 254 ---d~~~la~g~d~~~~~~~ 270 (371)
T d1k8kc_ 254 ---ESSLVAAGHDCFPVLFT 270 (371)
T ss_dssp ---TTEEEEEETTSSCEEEE
T ss_pred ---CCCEEEEEcCCceEEEE
Confidence 11233344466555554
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=2.3e-26 Score=240.76 Aligned_cols=246 Identities=18% Similarity=0.306 Sum_probs=191.9
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
..+|...|++++|+|+|++|++|+.||.|++||...++.+..+.+|...|.+++|++++..+++++
T Consensus 117 ~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~-------------- 182 (388)
T d1erja_ 117 SPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGS-------------- 182 (388)
T ss_dssp --CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE--------------
T ss_pred ccCCCCCEEEEEECCCCCcceecccccccccccccccccccccccccccccccccccccccccccc--------------
Confidence 346888899999999999999999999999999999999999999999999999999999999997
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE-----
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL----- 159 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l----- 159 (641)
.++.+++||.++.........+...+....+.+++.+|++|+.|+.|++||.+++.....+
T Consensus 183 --------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~ 248 (388)
T d1erja_ 183 --------------GDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENE 248 (388)
T ss_dssp --------------TTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC----
T ss_pred --------------cceeeeeeeccccccccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccc
Confidence 9999999999999988888766665555555558899999999999999999998876665
Q ss_pred --ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCC--ceeee-cccCCCceeeeee-----eeeeCC
Q psy9327 160 --TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG--KLVLS-MKSKHPIWKYCKP-----VKYCNP 229 (641)
Q Consensus 160 --~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~--~~v~s-~~~~~~v~~~~~~-----l~s~~~ 229 (641)
.+|.+.|++++|+|++.+|++|+.|+.|++||+++........... ..... ......+..+.+. +++++.
T Consensus 249 ~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~ 328 (388)
T d1erja_ 249 SGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK 328 (388)
T ss_dssp --CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEET
T ss_pred cccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeC
Confidence 4688999999999999999999999999999998766543332111 11100 0111222222221 778889
Q ss_pred CeeEEEec-CCCcceeeec-CCcceEEEE------EcCCccEEEEecCCeEEEEEcC
Q psy9327 230 KHTLHICN-RKMEPLCNIH-ENTRVKSGA------WDESGVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 230 d~~I~i~d-~~~~~~~~~~-~~~~I~sla------~~p~g~~L~t~s~~~k~~l~~~ 278 (641)
|+.|++|| .+++++..+. +...|.+++ |+|++.+|++++.|+.+.+|+.
T Consensus 329 dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~ 385 (388)
T d1erja_ 329 DRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385 (388)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred CCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEee
Confidence 99999999 5567776665 467888886 4678999999998888888863
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.3e-24 Score=215.80 Aligned_cols=267 Identities=19% Similarity=0.271 Sum_probs=206.9
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
+.+.+|+..|+|++| +|++|++|+.||+|+|||+.+++++..+.+|.++|.+++| ++.+|++|+
T Consensus 9 ~~~~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s------------ 72 (293)
T d1p22a2 9 HCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGS------------ 72 (293)
T ss_dssp ECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEE------------
T ss_pred eccCCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeec--ccceeeccc------------
Confidence 455677888998754 7899999999999999999999999999999999999887 567999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe---eEEEE
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN---CICVL 159 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~---~i~~l 159 (641)
.|+.|++|++..+........+.... ..+.+....+++++.++.+.+||..+.. ....+
T Consensus 73 ----------------~D~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (293)
T d1p22a2 73 ----------------SDSTVRVWDVNTGEMLNTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVL 134 (293)
T ss_dssp ----------------TTSCEEEEESSSCCEEEEECCCCSCE--EEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEE
T ss_pred ----------------cccccccccccccccccccccccccc--ccccccccceeecccccceeEeeccccccccccccc
Confidence 99999999999998887777555544 3455666789999999999999998654 45566
Q ss_pred ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-C
Q psy9327 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-R 238 (641)
Q Consensus 160 ~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~ 238 (641)
..|...+.+..+. ...+++++.|++|++||.++++....+.++...+..+..... .++++..|+.+++|| .
T Consensus 135 ~~~~~~v~~~~~~--~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~------~l~~~~~dg~i~i~d~~ 206 (293)
T d1p22a2 135 VGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR------LVVSGSSDNTIRLWDIE 206 (293)
T ss_dssp CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETT------EEEEEETTSCEEEEETT
T ss_pred cccccccccceec--ccccccccCCCceeeecCCCCcEEEEEcccccccccccCCCC------eEEEecCCCEEEEEecc
Confidence 7889999888776 567889999999999999999988888776665554332221 267788999999999 4
Q ss_pred CCcceeeecC-CcceEEEEEcCCccEEEEecCCeEEEEEcCCC----------CeEecc---ccceEEEEEcCcEEEEEe
Q psy9327 239 KMEPLCNIHE-NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH----------GIIRTL---DLPIYITKIKGNQVYYLD 304 (641)
Q Consensus 239 ~~~~~~~~~~-~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~----------g~I~~~---d~p~~~~~~~g~~v~~~~ 304 (641)
....+..... ...+. .+.+++.++++++.++.+.+|+... ..+..+ ..++.....++..+++++
T Consensus 207 ~~~~~~~~~~~~~~v~--~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d~~~l~s~s 284 (293)
T d1p22a2 207 CGACLRVLEGHEELVR--CIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSS 284 (293)
T ss_dssp TCCEEEEECCCSSCEE--EEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECC
T ss_pred cceeeeeecccceeee--eccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEcCCEEEEEe
Confidence 4444444443 33443 4556678999999999999996321 122222 223334455788999999
Q ss_pred CCCCeEEEE
Q psy9327 305 RECSPHVLR 313 (641)
Q Consensus 305 ~dg~i~v~~ 313 (641)
.||.+++|+
T Consensus 285 ~Dg~i~iWD 293 (293)
T d1p22a2 285 HDDTILIWD 293 (293)
T ss_dssp SSSEEEEEC
T ss_pred cCCEEEEeC
Confidence 999999995
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.94 E-value=1.4e-24 Score=221.23 Aligned_cols=239 Identities=13% Similarity=0.185 Sum_probs=194.5
Q ss_pred ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC
Q psy9327 43 LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD 122 (641)
Q Consensus 43 ~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~ 122 (641)
..+++++|.++|++++|+|++++|++|+ .||+|++||+.+++.+..+..|.+
T Consensus 47 ~~~tL~GH~~~I~~l~~s~~~~~l~sgs----------------------------~Dg~v~iWd~~~~~~~~~~~~~~~ 98 (340)
T d1tbga_ 47 TRRTLRGHLAKIYAMHWGTDSRLLVSAS----------------------------QDGKLIIWDSYTTNKVHAIPLRSS 98 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEE----------------------------TTTEEEEEETTTTEEEEEEECSCS
T ss_pred eeEEECCCCCCEEEEEECCCCCEEEEEE----------------------------CCCceeeeecccceeEEEEecccc
Confidence 4566889999999999999999999998 999999999999999999999999
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEECCCCe----eEE-----------------------------------------
Q psy9327 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRN----CIC----------------------------------------- 157 (641)
Q Consensus 123 ~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~----~i~----------------------------------------- 157 (641)
+|.+++|+|++.++++|+.|+.+++|+..... ...
T Consensus 99 ~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (340)
T d1tbga_ 99 WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTT 178 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEE
T ss_pred cEEeeEeeccceeeeeecccceeecccccccccccccceecccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999975421 111
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
....+...+....+.+.+..+++|+.|++|++||+++++....+.+|...+.++.. +|--. .+++++.|+.+++||
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~-~p~~~---~l~s~s~d~~i~~~~ 254 (340)
T d1tbga_ 179 TFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICF-FPNGN---AFATGSDDATCRLFD 254 (340)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECCCSSCEEEEEE-CTTSS---EEEEEETTSCEEEEE
T ss_pred cccccceeEeeeccccccceeEEeecCceEEEEECCCCcEEEEEeCCCCCeEEEEE-CCCCC---EEEEEeCCCeEEEEe
Confidence 12235566778888889999999999999999999999999999888877776542 22111 267788999999999
Q ss_pred CC-Ccceeee---cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecc---ccceEE--EEEcCcEEEEEeCCC
Q psy9327 238 RK-MEPLCNI---HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTL---DLPIYI--TKIKGNQVYYLDREC 307 (641)
Q Consensus 238 ~~-~~~~~~~---~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~---d~p~~~--~~~~g~~v~~~~~dg 307 (641)
.. ......+ .+...|.+++|+|+|.+|++|+.++.+.+|+..++. +..+ ..++.. +..++..+++++.||
T Consensus 255 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg 334 (340)
T d1tbga_ 255 LRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDS 334 (340)
T ss_dssp TTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTS
T ss_pred ecccccccccccccccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCC
Confidence 44 4444333 336779999999999999999999999999977654 3343 334443 445678999999999
Q ss_pred CeEEEE
Q psy9327 308 SPHVLR 313 (641)
Q Consensus 308 ~i~v~~ 313 (641)
.+++|+
T Consensus 335 ~v~iWd 340 (340)
T d1tbga_ 335 FLKIWN 340 (340)
T ss_dssp CEEEEC
T ss_pred EEEEeC
Confidence 999995
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.93 E-value=1.8e-25 Score=226.51 Aligned_cols=280 Identities=8% Similarity=0.014 Sum_probs=197.1
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccc---ccccccCeEEEEEeCCCC-EEEEeceeeEEee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK---FDEHEGPVRGICFHNQQP-IFVSGGKMIVMAY 77 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~---~~~h~~~V~~i~fsp~~~-~l~sgs~~~~~~~ 77 (641)
|...++|++.|++|+|+|++++||+|+.||+|+|||++++..... ...|.++|.+++|+|++. ++++|+
T Consensus 4 v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~------- 76 (342)
T d1yfqa_ 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGT------- 76 (342)
T ss_dssp EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEE-------
T ss_pred EEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcc-------
Confidence 566789999999999999999999999999999999977654322 336999999999998754 677776
Q ss_pred eceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC-CeEEEEEccCCCEEEEEeCCCeEEEEECCCCe--
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD-YIRTTFFHHEYPWILSASDDQTIRIWYWQSRN-- 154 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~-~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~-- 154 (641)
.|+.|++|+...+........+.. ......+.++...+++++.|+++++||++++.
T Consensus 77 ---------------------~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~ 135 (342)
T d1yfqa_ 77 ---------------------VQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDG 135 (342)
T ss_dssp ---------------------TTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTB
T ss_pred ---------------------cccceeeeecccccccccccccccccccccccccccccccccccccccceeeccccccc
Confidence 999999999998877777665544 44556677788899999999999999986543
Q ss_pred --eEEEEccC--CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc---CCCceeeecccCCCceeeeeeeeee
Q psy9327 155 --CICVLTGH--NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP---GMGKLVLSMKSKHPIWKYCKPVKYC 227 (641)
Q Consensus 155 --~i~~l~~h--~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~---~~~~~v~s~~~~~~v~~~~~~l~s~ 227 (641)
.......+ ........+.+.+..+++++.|+.|++||++......... .......+...... -...+..+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 212 (342)
T d1yfqa_ 136 VIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPK---EQEGYACS 212 (342)
T ss_dssp CEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSG---GGCEEEEE
T ss_pred eeeecccccccccceeeeeeeeccCCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecC---CCCEEEee
Confidence 22333333 2334566778889999999999999999998765443221 11111111111000 00115567
Q ss_pred CCCeeEEEecCCCcc-------ee----------eecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecccc-
Q psy9327 228 NPKHTLHICNRKMEP-------LC----------NIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDL- 288 (641)
Q Consensus 228 ~~d~~I~i~d~~~~~-------~~----------~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~- 288 (641)
+.++.+.+|+..... .. ...+...+.+++|+|++.+|++|+.|+.+.+|+.+++. +..+..
T Consensus 213 s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~ 292 (342)
T d1yfqa_ 213 SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF 292 (342)
T ss_dssp ETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC
T ss_pred cCCCeEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCC
Confidence 788999998722110 00 01124568899999999999999999999999988875 333321
Q ss_pred ---ceEEEEEcCcEEEEEeCCCCeEEE
Q psy9327 289 ---PIYITKIKGNQVYYLDRECSPHVL 312 (641)
Q Consensus 289 ---p~~~~~~~g~~v~~~~~dg~i~v~ 312 (641)
++..+..+++.+++++.|+..++|
T Consensus 293 ~~~~~~~~s~~~~~l~~a~sdd~~~~~ 319 (342)
T d1yfqa_ 293 NEDSVVKIACSDNILCLATSDDTFKTN 319 (342)
T ss_dssp SSSEEEEEEECSSEEEEEEECTHHHHC
T ss_pred CCCEEEEEEeCCCEEEEEEcCCcEEEe
Confidence 233455566666666666555544
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.93 E-value=8.2e-24 Score=215.99 Aligned_cols=266 Identities=20% Similarity=0.280 Sum_probs=199.3
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccc--cccCeEEEEEeCCCCEEEEeceee-EEeee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDE--HEGPVRGICFHNQQPIFVSGGKMI-VMAYQ 78 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~--h~~~V~~i~fsp~~~~l~sgs~~~-~~~~~ 78 (641)
+.+|++|+++|++++|+|+ .+|++|+.||+|++|+....+....... +...+....+++++..+++++... +..|+
T Consensus 46 ~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~ 124 (355)
T d1nexb2 46 LLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 124 (355)
T ss_dssp EEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEE
T ss_pred EEEEECCCCCEEEEEEcCC-CEEEEEecccccccccccccccccccccccccccccccccccccceeeeecCCCcEEEEE
Confidence 5789999999999999986 5899999999999999988876655543 334456677888999998887422 22222
Q ss_pred ceee---------------------------eccc-------CCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCe
Q psy9327 79 GCIL---------------------------ESRN-------EPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYI 124 (641)
Q Consensus 79 ~~~~---------------------------~~~~-------~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V 124 (641)
.... .... ........+++..|+.|++||+.+++.+..+.++...+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 204 (355)
T d1nexb2 125 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRI 204 (355)
T ss_dssp CCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred ccCCceeccccccceeccceeccccccceeeeeeeccccccccccccceeeeecccceeeeeecccccceeeeecccccc
Confidence 1000 0000 00112456678899999999999999999999999999
Q ss_pred EEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC
Q psy9327 125 RTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM 204 (641)
Q Consensus 125 ~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~ 204 (641)
.++.|+|+++++++++.|++|++||.+++.++..+.+|...|.+++|+ ++++++|+.||+|++||+++........
T Consensus 205 ~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~-- 280 (355)
T d1nexb2 205 YSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH-- 280 (355)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEEC--SSEEEEECTTSEEEEEETTTCCEEEEEE--
T ss_pred ccccccccceeeecccccceEEeeeccccccccccccccccccccccc--cceeeeeecccccccccccccceecccc--
Confidence 999999999999999999999999999999999999999999999986 5799999999999999999876543332
Q ss_pred CceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceee--ecCCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 205 GKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCN--IHENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 205 ~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~--~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
...+.++.. +.....+.++++|+.|++|| .+++.+.. ..+..+|.+++|+|+ ..+++++.||+++||-
T Consensus 281 ~~~~~~~~~----~~~~~~~l~~g~d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~-~~~~~~s~dg~~~l~~ 351 (355)
T d1nexb2 281 HTNLSAITT----FYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK-TLVAAVEKDGQSFLEI 351 (355)
T ss_dssp CTTCCCCCE----EEECSSEEEEEETTEEEEEETTTCCBCCSCTTTTCSEEEEEEEETT-EEEEEEESSSCEEEEE
T ss_pred cCCceEEEE----EcCCCCEEEEEeCCEEEEEECCCCCEEEEEecCCCCCEEEEEEcCC-eEEEEEECCCcEEEEE
Confidence 222222111 11111244445689999999 45555532 345778999999997 4677888888766653
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.92 E-value=1.8e-23 Score=209.96 Aligned_cols=262 Identities=12% Similarity=0.109 Sum_probs=188.1
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEec-eeeEEeeec
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG-KMIVMAYQG 79 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs-~~~~~~~~~ 79 (641)
++++|+||.++|++++|+| |++|+.||+|++||..++. ..|...|.+++|++++.+ ++++ +.....|+.
T Consensus 5 ~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~-----~~h~~~V~~~~~~~~~~~-~s~s~D~~v~~w~~ 74 (287)
T d1pgua2 5 VLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH-----QDHSNLIVSLDNSKAQEY-SSISWDDTLKVNGI 74 (287)
T ss_dssp EEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEEE-----CCCCSCEEEEECCSTTCC-EEEETTTEEEETTE
T ss_pred eeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCCC-----CCCCCCEEEEEecCCCeE-EEEeeccccccccc
Confidence 3689999999999999997 8999999999999987653 579999999999987764 5554 332323322
Q ss_pred eeeecccCC-----cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCC-eEEEEECCCC
Q psy9327 80 CILESRNEP-----CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ-TIRIWYWQSR 153 (641)
Q Consensus 80 ~~~~~~~~~-----~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg-~I~vWd~~~~ 153 (641)
........+ ......++.+.++.+.+|+..+++.+..+..+ ..+ .++++++..+++++.|+ .|++|++...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~v~~~~~~~v~~~~~~~~ 151 (287)
T d1pgua2 75 TKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLN-SPG--SAVSLSQNYVAVGLEEGNTIQVFKLSDL 151 (287)
T ss_dssp EEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECS-SCE--EEEEECSSEEEEEETTTSCEEEEETTEE
T ss_pred cccccccceeeeeeccCCceEEEeecccceeeeccceeeeeecccc-cee--eeeeccCcceeeeccccceeeeeecccc
Confidence 111111111 11122334456778999999999988887643 333 46677888888877765 7999999877
Q ss_pred eeEEEEc-cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceee-eccCCCceeeecccCCCceee-------eeee
Q psy9327 154 NCICVLT-GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKN-VAPGMGKLVLSMKSKHPIWKY-------CKPV 224 (641)
Q Consensus 154 ~~i~~l~-~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~-~~~~~~~~v~s~~~~~~v~~~-------~~~l 224 (641)
+....+. .|...+++++|+|++.+|++|+.||.|++||+.+++... .+.+|...+.++.. +|.... ..-+
T Consensus 152 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~-~p~~~~~~~~~~~~~~l 230 (287)
T d1pgua2 152 EVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISW-KPAEKGANEEEIEEDLV 230 (287)
T ss_dssp EEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEE-CCCC------CCSCCEE
T ss_pred ceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccccccccccccccceeee-cccccccccccCCCCee
Confidence 6655554 578899999999999999999999999999999887654 35667777766442 221110 0126
Q ss_pred eeeCCCeeEEEec-CC-Ccceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 225 KYCNPKHTLHICN-RK-MEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 225 ~s~~~d~~I~i~d-~~-~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
++++.|+.|++|| .+ ...+.... +...|.+++|+|++ .+++++.|+.+.+|+
T Consensus 231 ~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~ 285 (287)
T d1pgua2 231 ATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWN 285 (287)
T ss_dssp EEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT-EEEEEETTSCEEEEE
T ss_pred EeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCC-EEEEEECCCeEEEEE
Confidence 7888999999999 33 34444443 57789999999986 477777777777775
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.91 E-value=7.5e-24 Score=223.96 Aligned_cols=173 Identities=14% Similarity=0.251 Sum_probs=146.0
Q ss_pred cCCCCeEEEEEccC-----CCeEEEEeCCCcEEEEECccCc------------------ccccccccccCeEEEEEeCCC
Q psy9327 7 TKSARVKGLSFHPK-----RPWILSSLHNGVIQLWDYRMNT------------------LLEKFDEHEGPVRGICFHNQQ 63 (641)
Q Consensus 7 ~H~~~V~~l~fspd-----g~~Lasg~~dg~I~iWD~~~~~------------------~l~~~~~h~~~V~~i~fsp~~ 63 (641)
.+...+.+++|.++ +.++++++.||++++||+.... .......+...+.+++|+|++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg 196 (393)
T d1sq9a_ 117 MKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG 196 (393)
T ss_dssp GGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS
T ss_pred cCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCC
Confidence 35566788888875 3588999999999999985321 011122355678999999998
Q ss_pred CEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE------ccCCCCeEEEEEccCCCEEE
Q psy9327 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL------LGHLDYIRTTFFHHEYPWIL 137 (641)
Q Consensus 64 ~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~------~~h~~~V~~v~fsp~~~~l~ 137 (641)
+|++|+ .|++|++||+.+++++..+ .+|.++|++++|+|++++|+
T Consensus 197 -~lasgs----------------------------~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~ 247 (393)
T d1sq9a_ 197 -LIATGF----------------------------NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLA 247 (393)
T ss_dssp -EEEEEC----------------------------TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEE
T ss_pred -EEEEEe----------------------------CCCcEEEEeecccccccccccccccccccceEEEcccccccceee
Confidence 888887 9999999999999887654 46899999999999999999
Q ss_pred EEeCCCe---EEEEECCCCeeEEEEc-------------cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeec
Q psy9327 138 SASDDQT---IRIWYWQSRNCICVLT-------------GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 138 sgs~Dg~---I~vWd~~~~~~i~~l~-------------~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~ 201 (641)
+|+.|++ |++||+++++++..+. +|.+.|++++|+|++++|+|||.|++|++||+++++++.++
T Consensus 248 sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l 327 (393)
T d1sq9a_ 248 IAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTL 327 (393)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred eecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEE
Confidence 9999874 9999999998888774 89999999999999999999999999999999999999999
Q ss_pred cCCCcee
Q psy9327 202 PGMGKLV 208 (641)
Q Consensus 202 ~~~~~~v 208 (641)
.+|...|
T Consensus 328 ~gH~~~v 334 (393)
T d1sq9a_ 328 NMHCDDI 334 (393)
T ss_dssp ECCGGGC
T ss_pred CCcCCcc
Confidence 8876555
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.91 E-value=2.1e-23 Score=214.82 Aligned_cols=173 Identities=13% Similarity=0.182 Sum_probs=152.7
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeC--CCcEEEEECccCcccccccccccCeEEEEEeCCCCE-EEEeceeeEEeeece
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLH--NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI-FVSGGKMIVMAYQGC 80 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~--dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~-l~sgs~~~~~~~~~~ 80 (641)
.+..|.++|.+++|+|++.++++++. ++.+++|++++++.+..+.+|..+|.+++|+|+++. +++++
T Consensus 110 ~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~---------- 179 (325)
T d1pgua1 110 EFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVG---------- 179 (325)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEE----------
T ss_pred ccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeecccccccccccccccceEEEee----------
Confidence 46678999999999999999887764 678999999999999999999999999999999876 55665
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc---cCCCCeEEEEEccC-CCEEEEEeCCCeEEEEECCCCeeE
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL---GHLDYIRTTFFHHE-YPWILSASDDQTIRIWYWQSRNCI 156 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~---~h~~~V~~v~fsp~-~~~l~sgs~Dg~I~vWd~~~~~~i 156 (641)
.|+.|++||..+++....+. +|.+.|.+++|+|+ +.++++|+.|+.|++||.++++++
T Consensus 180 ------------------~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~ 241 (325)
T d1pgua1 180 ------------------DDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL 241 (325)
T ss_dssp ------------------TTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEE
T ss_pred ------------------cccccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeecccccc
Confidence 89999999999888766654 56788999999996 689999999999999999999999
Q ss_pred EEEccCCCCEEEEEEe---cCCCEEEEEeCCCeEEEEecCCCceeeeccCC
Q psy9327 157 CVLTGHNHYVMCAQFH---PTDDIVVSASLDQTIRVWDISGLRKKNVAPGM 204 (641)
Q Consensus 157 ~~l~~h~~~V~sl~fs---p~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~ 204 (641)
.++.+|...+.++.|+ |++.+|++++.|++|+|||+++++.+..+..+
T Consensus 242 ~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~ 292 (325)
T d1pgua1 242 KYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLD 292 (325)
T ss_dssp EECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred ccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEec
Confidence 9999999888766666 68999999999999999999998888776644
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.89 E-value=7.6e-22 Score=208.35 Aligned_cols=246 Identities=11% Similarity=0.099 Sum_probs=167.0
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccc------cccccccCeEEEEEe---C----CCCEEEEe
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLE------KFDEHEGPVRGICFH---N----QQPIFVSG 69 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~------~~~~h~~~V~~i~fs---p----~~~~l~sg 69 (641)
...++|.+.|.++++++ +++++|+.||+|+|||..+.+... ....|...+..+... + ++.+++++
T Consensus 8 ~~~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 85 (393)
T d1sq9a_ 8 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT 85 (393)
T ss_dssp EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred ecCCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEE
Confidence 34689999999999875 689999999999999976553211 112244333333221 1 22345555
Q ss_pred ce-eeEEeee--------------ceeeecc--------------cCCcceeeEEEeeCCCeEEEEECCCCe--------
Q psy9327 70 GK-MIVMAYQ--------------GCILESR--------------NEPCLFRIKSVLGDDYKIKVWNYKQRK-------- 112 (641)
Q Consensus 70 s~-~~~~~~~--------------~~~~~~~--------------~~~~~~~~~~~~s~Dg~I~vWD~~t~~-------- 112 (641)
+. ..+..|. ....... ........+++++.|++|++||+....
T Consensus 86 ~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~ 165 (393)
T d1sq9a_ 86 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTL 165 (393)
T ss_dssp ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTT
T ss_pred eCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeee
Confidence 42 1111111 0000000 001113466788999999999974211
Q ss_pred -------eEE---EEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE------ccCCCCEEEEEEecCCC
Q psy9327 113 -------CIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL------TGHNHYVMCAQFHPTDD 176 (641)
Q Consensus 113 -------~~~---~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l------~~h~~~V~sl~fsp~g~ 176 (641)
... ....+...+.+++|+|++ +|++|+.|++|++||+++++++..+ .+|...|++++|+|+|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~ 244 (393)
T d1sq9a_ 166 NWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGS 244 (393)
T ss_dssp CCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTT
T ss_pred eeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccc
Confidence 111 122355678999999997 8999999999999999999877654 57999999999999999
Q ss_pred EEEEEeCCCe---EEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceE
Q psy9327 177 IVVSASLDQT---IRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVK 253 (641)
Q Consensus 177 ~lvSgs~Dgt---I~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~ 253 (641)
+|++|+.|++ |++||+++++.+..+....... ........|...|+
T Consensus 245 ~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~-------------------------------~~~~~~~gH~~~V~ 293 (393)
T d1sq9a_ 245 LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSS-------------------------------QASLGEFAHSSWVM 293 (393)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEECBC---------------------------------------CCBSBSSCEE
T ss_pred eeeeecCCCCcceeeecccccceeeeeeccccccc-------------------------------cceeeeecccCcee
Confidence 9999999974 9999999988877665321110 00011123577899
Q ss_pred EEEEcCCccEEEEecCCeEEEEEcCCCCe
Q psy9327 254 SGAWDESGVFIYTTSNHIKYAIVNGDHGI 282 (641)
Q Consensus 254 sla~~p~g~~L~t~s~~~k~~l~~~~~g~ 282 (641)
+++|+|+|.+|++++.|+.+.+|+.++|.
T Consensus 294 ~l~fspd~~~l~S~s~D~~v~vWd~~~g~ 322 (393)
T d1sq9a_ 294 SLSFNDSGETLCSAGWDGKLRFWDVKTKE 322 (393)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEETTTTE
T ss_pred eeccCCCCCeeEEECCCCEEEEEECCCCC
Confidence 99999999999999999999999988775
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.89 E-value=4.9e-22 Score=204.42 Aligned_cols=160 Identities=16% Similarity=0.127 Sum_probs=140.9
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCC--cEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNG--VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg--~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
+|..+|.+++|+|||++|++++.+. .|++||..+++. ..+..|.+.|.+++|+|+++++++++
T Consensus 40 ~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~-~~~~~~~~~v~~~~~spdg~~l~~~~-------------- 104 (360)
T d1k32a3 40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKA-EKFEENLGNVFAMGVDRNGKFAVVAN-------------- 104 (360)
T ss_dssp SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCE-EECCCCCCSEEEEEECTTSSEEEEEE--------------
T ss_pred cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcE-EEeeCCCceEEeeeecccccccceec--------------
Confidence 6999999999999999998776553 799999987754 56778999999999999999999998
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEe----------CCCeEEEEECCCCe
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS----------DDQTIRIWYWQSRN 154 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs----------~Dg~I~vWd~~~~~ 154 (641)
.++.+++|+..+++....+..|...+.+++|+|++++|+.++ .++.+++||..+++
T Consensus 105 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~ 170 (360)
T d1k32a3 105 --------------DRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 170 (360)
T ss_dssp --------------TTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred --------------cccccccccccccceeeeeecccccccchhhccceeeeeeeccccccceeeccccceeeeccccCc
Confidence 999999999999999999999999999999999999998654 35579999999887
Q ss_pred eEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCc
Q psy9327 155 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196 (641)
Q Consensus 155 ~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~ 196 (641)
... +..|...+.++.|+|+|+.|++++.|+.+++||.....
T Consensus 171 ~~~-~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~ 211 (360)
T d1k32a3 171 IFA-ATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLN 211 (360)
T ss_dssp EEE-CSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSC
T ss_pred eee-ecccccccccccccCCCCEEEEEeCCCceEcccccccc
Confidence 654 44577889999999999999999999999999976543
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.89 E-value=6.3e-22 Score=199.51 Aligned_cols=240 Identities=11% Similarity=0.100 Sum_probs=180.1
Q ss_pred CcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc-c
Q psy9327 41 NTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL-G 119 (641)
Q Consensus 41 ~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~-~ 119 (641)
|+..+.+.+|.++|++++|+|++++|++|+ .|++|++||+++++++..+. +
T Consensus 2 g~~~~~~~GH~~~V~~l~~s~dg~~l~s~s----------------------------~Dg~v~vWd~~~~~~~~~~~~~ 53 (299)
T d1nr0a2 2 GSIDQVRYGHNKAITALSSSADGKTLFSAD----------------------------AEGHINSWDISTGISNRVFPDV 53 (299)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEEE----------------------------TTSCEEEEETTTCCEEECSSCS
T ss_pred CccceEcCCCCCCcEEEEECCCCCEEEEEc----------------------------CCCeEEEEECCCCcEEEEEcCC
Confidence 556677889999999999999999999998 99999999999999888874 6
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee---EEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCc
Q psy9327 120 HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC---ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196 (641)
Q Consensus 120 h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~---i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~ 196 (641)
|.+.|.+++|+|++. +++++.|+.+++|+...... ......|...+.+++|+|++..+++++ ++.+++|+.....
T Consensus 54 h~~~v~~v~~~~~g~-~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~~~~~ 131 (299)
T d1nr0a2 54 HATMITGIKTTSKGD-LFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHGKLT 131 (299)
T ss_dssp CSSCEEEEEECTTSC-EEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE-SSEEEEEETTEEE
T ss_pred CCCcEEEEEeeccce-eecccceeeEEEeccCCccccccccccccccccccccccccccccccccc-ccccccccccccc
Confidence 999999999999987 56677799999999765321 122345778899999999999877665 5689999864322
Q ss_pred eeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCc---ceeeecCCcceEEEEEcCCccEEEEecCCeEE
Q psy9327 197 KKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKME---PLCNIHENTRVKSGAWDESGVFIYTTSNHIKY 273 (641)
Q Consensus 197 ~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~---~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~ 273 (641)
.....+.....+..... ..+++++.++.+.+||.+.. ......+...|.+++|+|++.++++++.++.+
T Consensus 132 --~~~~~~~~~~~~~s~~~------~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i 203 (299)
T d1nr0a2 132 --EVPISYNSSCVALSNDK------QFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKV 203 (299)
T ss_dssp --EEECSSCEEEEEECTTS------CEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred --ccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 22222222222111111 11567789999999994332 33445567899999999999999999999999
Q ss_pred EEEcCCCCe-Ee---cc---ccceEE--EEEcCcEEEEEeCCCCeEEEEeCCcc
Q psy9327 274 AIVNGDHGI-IR---TL---DLPIYI--TKIKGNQVYYLDRECSPHVLRIDPTE 318 (641)
Q Consensus 274 ~l~~~~~g~-I~---~~---d~p~~~--~~~~g~~v~~~~~dg~i~v~~~~~~~ 318 (641)
.+|+..++. +. .+ ..++.. +..++..+++++.||.+++|++....
T Consensus 204 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~ 257 (299)
T d1nr0a2 204 IPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPS 257 (299)
T ss_dssp EEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred ccccccccccccccccccccccccccccccccccceEEEcCCCEEEEEECCCCC
Confidence 999876543 22 11 223332 44678899999999999999987643
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=2.5e-21 Score=196.11 Aligned_cols=247 Identities=20% Similarity=0.309 Sum_probs=177.8
Q ss_pred EECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEE
Q psy9327 36 WDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIF 115 (641)
Q Consensus 36 WD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~ 115 (641)
|+....+....+++|.+.|.+ +++++|++|+||+ .||+|+|||+.+++++.
T Consensus 1 W~~~~~~~~~~l~GH~~~V~s-~~~~~g~~l~sgs----------------------------~Dg~i~vWd~~~~~~~~ 51 (342)
T d2ovrb2 1 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGS----------------------------DDNTLKVWSAVTGKCLR 51 (342)
T ss_dssp HHHSCCCCCEEEECSTTSCEE-EEEEETTEEEEEE----------------------------TTSCEEEEETTTCCEEE
T ss_pred CCCCCCCcCEEECCcCCceEE-EEEECCCEEEEEe----------------------------CCCeEEEEECCCCCEEE
Confidence 555556677788999999865 4677889999998 99999999999999999
Q ss_pred EEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEE------------------------
Q psy9327 116 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQF------------------------ 171 (641)
Q Consensus 116 ~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~f------------------------ 171 (641)
++.+|.+.|.+++|+|+ ++++|+.|+++++|+............+...+....+
T Consensus 52 ~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 129 (342)
T d2ovrb2 52 TLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQC 129 (342)
T ss_dssp ECCCCSSCEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCE
T ss_pred EEeCCCCCEEEEEeCCC--ccccceecccccccccccccceecccccceeEeeeecccccccccccceeEEEeecccccc
Confidence 99999999999999875 8999999999999999877655554444443333222
Q ss_pred --------------ecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 172 --------------HPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 172 --------------sp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
.+....+++++.|+.|++||....+....+.++...+....... ..+++++.|+.|++||
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~------~~l~s~~~dg~i~~~d 203 (342)
T d2ovrb2 130 LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG------IHVVSGSLDTSIRVWD 203 (342)
T ss_dssp EEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEECS------SEEEEEETTSCEEEEE
T ss_pred eeeeecccccceeeccccceeeeecCCCeEEEeecccceeeEEEcCcccccccccCCC------CEEEEEeCCCeEEEee
Confidence 22334455566666666666665555555554433333222111 1267888999999999
Q ss_pred -CCCcceeeecC-CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE-eccc------cceEEEEEcCcEEEEEeCCCC
Q psy9327 238 -RKMEPLCNIHE-NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII-RTLD------LPIYITKIKGNQVYYLDRECS 308 (641)
Q Consensus 238 -~~~~~~~~~~~-~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I-~~~d------~p~~~~~~~g~~v~~~~~dg~ 308 (641)
.....+..... ...+.++++++ .++++++.++.+.+|+...... ..+. .++.....+++.+++++.||.
T Consensus 204 ~~~~~~~~~~~~~~~~v~~~~~~~--~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~Dg~ 281 (342)
T d2ovrb2 204 VETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGT 281 (342)
T ss_dssp TTTCCEEEEECCCCSCEEEEEEET--TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSE
T ss_pred cccceeeeEecccccceeEEecCC--CEEEEEcCCCEEEEEecccccccccccccceeeeceeecccCCCeeEEEcCCCE
Confidence 44444544443 56777777765 5999999999999999766543 2222 234556678899999999999
Q ss_pred eEEEEeCCcchhh
Q psy9327 309 PHVLRIDPTEFKF 321 (641)
Q Consensus 309 i~v~~~~~~~~~~ 321 (641)
+++|++.+++...
T Consensus 282 i~iwd~~tg~~i~ 294 (342)
T d2ovrb2 282 VKLWDLKTGEFIR 294 (342)
T ss_dssp EEEEETTTCCEEE
T ss_pred EEEEECCCCCEEE
Confidence 9999998776543
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=2.8e-20 Score=183.90 Aligned_cols=232 Identities=23% Similarity=0.365 Sum_probs=184.0
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+++|++|+++|++++| ++++|++|+.||.|++|++..+........+.... ..+.+....++++.
T Consensus 48 ~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----------- 112 (293)
T d1p22a2 48 KRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAV--LHLRFNNGMMVTCS----------- 112 (293)
T ss_dssp EEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCE--EEEECCTTEEEEEE-----------
T ss_pred EEEEecCCCCEeeeec--ccceeeccccccccccccccccccccccccccccc--ccccccccceeecc-----------
Confidence 5788999999999887 57899999999999999999887766654444333 34556666778776
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCe---eEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRK---CIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~---~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
.++.+.+||..+.. ....+..|...+..+.+.+ ..+++++.|+.|++||.++++++..
T Consensus 113 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~s~d~~i~~~d~~~~~~~~~ 173 (293)
T d1p22a2 113 -----------------KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRT 173 (293)
T ss_dssp -----------------TTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEET--TEEEEEETTSEEEEEETTTCCEEEE
T ss_pred -----------------cccceeEeeccccccccccccccccccccccceecc--cccccccCCCceeeecCCCCcEEEE
Confidence 89999999998754 4556778999998887765 4688999999999999999999999
Q ss_pred EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~ 238 (641)
+.+|...+..+.++ +..+++++.||+|++||+++.+......++...+........ .+++++.|+.|++||.
T Consensus 174 ~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~------~l~sg~~dg~i~iwd~ 245 (293)
T d1p22a2 174 LNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK------RIVSGAYDGKIKVWDL 245 (293)
T ss_dssp EECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSS------EEEEEETTSCEEEEEH
T ss_pred EcccccccccccCC--CCeEEEecCCCEEEEEecccceeeeeecccceeeeeccccce------EEEEEcCCCEEEEEEC
Confidence 99999999888775 678999999999999999999998888877666654332221 2677889999999982
Q ss_pred C----------Ccceeee-cCCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 239 K----------MEPLCNI-HENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 239 ~----------~~~~~~~-~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
. ...+..+ .+...|.+++|++ .+|++++.|+.+.+|+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d~--~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 246 VAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE--FQIVSSSHDDTILIWD 293 (293)
T ss_dssp HHHTSTTSCTTTTEEEEECCCSSCCCCEEECS--SCEEECCSSSEEEEEC
T ss_pred CCCccccccCCceeeEEecCCCCCEEEEEEcC--CEEEEEecCCEEEEeC
Confidence 1 1223333 3467899999964 5799998888888885
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.87 E-value=3.7e-21 Score=197.73 Aligned_cols=272 Identities=10% Similarity=0.019 Sum_probs=190.1
Q ss_pred EEEEcc-CCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCccee
Q psy9327 14 GLSFHP-KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFR 92 (641)
Q Consensus 14 ~l~fsp-dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~ 92 (641)
.-.||| ||+++|+++ +|.|.+||...+..+. + .|.+.|.+++|+|||++|++++
T Consensus 7 ~~~fSP~dG~~~a~~~-~g~v~v~d~~~~~~~~-~-~~~~~v~~~~~spDg~~l~~~~---------------------- 61 (360)
T d1k32a3 7 AEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-V-PEPLRIRYVRRGGDTKVAFIHG---------------------- 61 (360)
T ss_dssp EEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-C-SCCSCEEEEEECSSSEEEEEEE----------------------
T ss_pred cccccCCCCCEEEEEE-CCeEEEEECCCCcEEE-c-cCCCCEEEEEECCCCCEEEEEE----------------------
Confidence 357999 999999887 5799999998876654 3 6999999999999999998876
Q ss_pred eEEEeeCC-CeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEE
Q psy9327 93 IKSVLGDD-YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQF 171 (641)
Q Consensus 93 ~~~~~s~D-g~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~f 171 (641)
..+ ..|++||.++++. ..+..|.+.|.+++|+|+++++++++.++.+++|+..++++...+..|...+.+++|
T Consensus 62 -----~~~g~~v~v~d~~~~~~-~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (360)
T d1k32a3 62 -----TREGDFLGIYDYRTGKA-EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTI 135 (360)
T ss_dssp -----ETTEEEEEEEETTTCCE-EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEE
T ss_pred -----cCCCCEEEEEECCCCcE-EEeeCCCceEEeeeecccccccceeccccccccccccccceeeeeecccccccchhh
Confidence 133 4799999998775 467789999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCEEEEEe----------CCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCc
Q psy9327 172 HPTDDIVVSAS----------LDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKME 241 (641)
Q Consensus 172 sp~g~~lvSgs----------~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~ 241 (641)
+|+|.+|+.++ .++.+++||..+++........ ..+.+.. ..|-- ..+++++.++.+.+|+....
T Consensus 136 spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~-~~~~~~~-~spdg---~~l~~~s~~~~~~~~d~~~~ 210 (360)
T d1k32a3 136 SDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTEN-SHDYAPA-FDADS---KNLYYLSYRSLDPSPDRVVL 210 (360)
T ss_dssp CTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSS-SBEEEEE-ECTTS---CEEEEEESCCCCCEECSSSS
T ss_pred ccceeeeeeeccccccceeeccccceeeeccccCceeeecccc-ccccccc-ccCCC---CEEEEEeCCCceEccccccc
Confidence 99999998654 3557999999988765544432 1111111 00000 00223333333333331100
Q ss_pred --------------------------------------------ceeeec-CCcceEEEEEcCCc-------------cE
Q psy9327 242 --------------------------------------------PLCNIH-ENTRVKSGAWDESG-------------VF 263 (641)
Q Consensus 242 --------------------------------------------~~~~~~-~~~~I~sla~~p~g-------------~~ 263 (641)
.+..+. .......+...+++ .+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (360)
T d1k32a3 211 NFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAY 290 (360)
T ss_dssp CEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHH
T ss_pred ceeeccccceEEEecccCccccceECCCcCcccccceeecccccceeecccCcCceeEeeecCCCceEEEEEecCCCeeE
Confidence 000000 11122233333332 23
Q ss_pred EEEecCCeEEEEEcCCCCeEeccccceE--EEEEcCcEEEEEeCCCCeEEEEeCCcchhh
Q psy9327 264 IYTTSNHIKYAIVNGDHGIIRTLDLPIY--ITKIKGNQVYYLDRECSPHVLRIDPTEFKF 321 (641)
Q Consensus 264 L~t~s~~~k~~l~~~~~g~I~~~d~p~~--~~~~~g~~v~~~~~dg~i~v~~~~~~~~~~ 321 (641)
+++++.++.+.+|+.+.+.+..+..++. .+..+|..+++.+.||.+++|+++.++...
T Consensus 291 ~~~~~~~~~i~~~d~~~~~~~~~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~ 350 (360)
T d1k32a3 291 YQGAPEKGVLLKYDVKTRKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDER 350 (360)
T ss_dssp HHCCCCCEEEEEEETTTCCEEEEEEEEEEEEECTTSCEEEEEETTSCEEEEESSCTTSCE
T ss_pred EEecCCCCEEEEEECCCCeEEEecCCcCEEEECCCCCEEEEEECCCeEEEEECCCCCcce
Confidence 3444567888888877776654433332 355678999999999999999998766543
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.85 E-value=6.3e-20 Score=183.63 Aligned_cols=221 Identities=12% Similarity=0.061 Sum_probs=165.8
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeec---e
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG---C 80 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~---~ 80 (641)
..++|.+.|.+++|++++ .+++++.|++|++|+....+ ....+.++++++++..++++.......++. .
T Consensus 41 ~~~~h~~~V~~~~~~~~~-~~~s~s~D~~v~~w~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (287)
T d1pgua2 41 MHQDHSNLIVSLDNSKAQ-EYSSISWDDTLKVNGITKHE-------FGSQPKVASANNDGFTAVLTNDDDLLILQSFTGD 112 (287)
T ss_dssp EECCCCSCEEEEECCSTT-CCEEEETTTEEEETTEEEEE-------CSSCEEEEEECSSSEEEEEETTSEEEEEETTTCC
T ss_pred CCCCCCCCEEEEEecCCC-eEEEEeeccccccccccccc-------cccceeeeeeccCCceEEEeecccceeeecccee
Confidence 457899999999999765 57899999999999976542 234567888999988888877544444322 1
Q ss_pred -eeecc-------cCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc-cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC
Q psy9327 81 -ILESR-------NEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL-GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151 (641)
Q Consensus 81 -~~~~~-------~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~-~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~ 151 (641)
+.... ..+......+++..++.|++|++...+....+. .|.+.+++++|+|++.+|++|+.|+.|++||+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~ 192 (287)
T d1pgua2 113 IIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQ 192 (287)
T ss_dssp EEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eeeeccccceeeeeeccCcceeeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeec
Confidence 11111 112223333444455689999998777666654 478899999999999999999999999999999
Q ss_pred CCeeEE-EEccCCCCEEEEEEecC----------CCEEEEEeCCCeEEEEecCC-CceeeeccCCCceeeecccCCCcee
Q psy9327 152 SRNCIC-VLTGHNHYVMCAQFHPT----------DDIVVSASLDQTIRVWDISG-LRKKNVAPGMGKLVLSMKSKHPIWK 219 (641)
Q Consensus 152 ~~~~i~-~l~~h~~~V~sl~fsp~----------g~~lvSgs~DgtI~IWD~~~-~~~~~~~~~~~~~v~s~~~~~~v~~ 219 (641)
+++... .+.+|...|.+++|+|. +.++++|+.|++|++||+++ .+....+.+|...|.++... |
T Consensus 193 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~-~--- 268 (287)
T d1pgua2 193 SREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWE-T--- 268 (287)
T ss_dssp TTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEE-E---
T ss_pred ccccccccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEEC-C---
Confidence 988665 46789999999999874 46899999999999999976 45566667777777665421 1
Q ss_pred eeeeeeeeCCCeeEEEec
Q psy9327 220 YCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 220 ~~~~l~s~~~d~~I~i~d 237 (641)
...+++++.|+.|++|+
T Consensus 269 -~~~l~s~g~D~~v~iW~ 285 (287)
T d1pgua2 269 -PSTLVSSGADACIKRWN 285 (287)
T ss_dssp -TTEEEEEETTSCEEEEE
T ss_pred -CCEEEEEECCCeEEEEE
Confidence 12367888999999997
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.83 E-value=1.3e-19 Score=182.64 Aligned_cols=250 Identities=12% Similarity=0.002 Sum_probs=171.2
Q ss_pred cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee---EEEEc
Q psy9327 42 TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC---IFTLL 118 (641)
Q Consensus 42 ~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~---~~~~~ 118 (641)
+.+...++|+..|++|+|+|++++|++|+ .|++|+|||+.++.. +....
T Consensus 2 ~~v~~~~~h~d~I~~l~fsp~~~~L~s~s----------------------------~Dg~v~iwd~~~~~~~~~~~~~~ 53 (342)
T d1yfqa_ 2 QIVQIEQAPKDYISDIKIIPSKSLLLITS----------------------------WDGSLTVYKFDIQAKNVDLLQSL 53 (342)
T ss_dssp EEEECSSCCSSCEEEEEEEGGGTEEEEEE----------------------------TTSEEEEEEEETTTTEEEEEEEE
T ss_pred CeEEcCCCCCCCEEEEEEeCCCCEEEEEE----------------------------CCCeEEEEEccCCCcceEEEEec
Confidence 34566678999999999999999999998 999999999976543 23334
Q ss_pred cCCCCeEEEEEccCC-CEEEEEeCCCeEEEEECCCCeeEEEEccCCCC-EEEEEEecCCCEEEEEeCCCeEEEEecCCCc
Q psy9327 119 GHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRNCICVLTGHNHY-VMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196 (641)
Q Consensus 119 ~h~~~V~~v~fsp~~-~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~-V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~ 196 (641)
+|.++|.+++|+|++ .+|++|+.|++|++|++..+........+... .....+.+++..+++++.|+++++||+++..
T Consensus 54 ~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~ 133 (342)
T d1yfqa_ 54 RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYG 133 (342)
T ss_dssp ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHT
T ss_pred CCCCCEEEEEEeCCCCCEEEEcccccceeeeecccccccccccccccccccccccccccccccccccccccceeeccccc
Confidence 699999999999875 48999999999999999988877766555444 4556667788999999999999999987544
Q ss_pred eeeeccCCCceeeecccCCCceee---eeeeeeeCCCeeEEEecCC-Ccce----eeecCCcceEEEEEc-CCccEEEEe
Q psy9327 197 KKNVAPGMGKLVLSMKSKHPIWKY---CKPVKYCNPKHTLHICNRK-MEPL----CNIHENTRVKSGAWD-ESGVFIYTT 267 (641)
Q Consensus 197 ~~~~~~~~~~~v~s~~~~~~v~~~---~~~l~s~~~d~~I~i~d~~-~~~~----~~~~~~~~I~sla~~-p~g~~L~t~ 267 (641)
............. .......+.. ...+..++.++.+++||.. .... ........+.+.++. .++..++++
T Consensus 134 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (342)
T d1yfqa_ 134 DGVIAVKNLNSNN-TKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACS 212 (342)
T ss_dssp TBCEEEEESCSSS-SSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEE
T ss_pred cceeeeccccccc-ccceeeeeeeeccCCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEee
Confidence 3322211000000 0000000000 0115677789999999943 2221 111224445555554 557889999
Q ss_pred cCCeEEEEEcCCCCeEec----------cc---------cce--EEEEEcCcEEEEEeCCCCeEEEEeCCcchh
Q psy9327 268 SNHIKYAIVNGDHGIIRT----------LD---------LPI--YITKIKGNQVYYLDRECSPHVLRIDPTEFK 320 (641)
Q Consensus 268 s~~~k~~l~~~~~g~I~~----------~d---------~p~--~~~~~~g~~v~~~~~dg~i~v~~~~~~~~~ 320 (641)
+.++++.+|..+...... .. .++ ..++.++..+++++.||.+++|++++.+..
T Consensus 213 s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l 286 (342)
T d1yfqa_ 213 SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp ETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred cCCCeEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEE
Confidence 999999988755432111 10 011 235567899999999999999999876543
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.81 E-value=2.4e-17 Score=164.48 Aligned_cols=247 Identities=11% Similarity=0.053 Sum_probs=185.6
Q ss_pred eeeccCCCCeEEEEEccCCCeEE-EEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~La-sg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+++... +.+.+++|+|||++|+ +++.++.|++||+.+++.+..+..+. .+.+++|++++..+++++
T Consensus 26 ~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------- 92 (301)
T d1l0qa2 26 ATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTN----------- 92 (301)
T ss_dssp EEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEE-----------
T ss_pred EEEECC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccc-cccccccccccccccccc-----------
Confidence 444433 4578999999999875 66679999999999999998887665 458899999999777665
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEE-EEeCCCeEEEEECCCCeeEEEEc
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~-sgs~Dg~I~vWd~~~~~~i~~l~ 160 (641)
..++.+.+||..+++....+..+ ....+++|+|++..++ ++..++.+.+|+..+...+..+.
T Consensus 93 ----------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (301)
T d1l0qa2 93 ----------------MASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS 155 (301)
T ss_dssp ----------------TTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred ----------------cccceeeecccccceeeeecccc-ccceEEEeecCCCeeeeeeccccceeeeeccccceeeecc
Confidence 37889999999999988888754 5667899999998764 56678899999999999888887
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCC-CeEEEEecCCCceeeeccCCCceeee-cccCCCceeeeeeeeeeCCCeeEEEec-
Q psy9327 161 GHNHYVMCAQFHPTDDIVVSASLD-QTIRVWDISGLRKKNVAPGMGKLVLS-MKSKHPIWKYCKPVKYCNPKHTLHICN- 237 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~lvSgs~D-gtI~IWD~~~~~~~~~~~~~~~~v~s-~~~~~~v~~~~~~l~s~~~d~~I~i~d- 237 (641)
.+ ..+..+.++|++..+++++.+ +.+.+|+....+.............. ....... .+ .......++.|.+||
T Consensus 156 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~--v~~~~~~~~~v~v~D~ 231 (301)
T d1l0qa2 156 VG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTK-AY--VTNVDKYFNTVSMIDT 231 (301)
T ss_dssp CC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSE-EE--EEEECSSCCEEEEEET
T ss_pred cC-CCceEEEeeccccceeeecccccccccccccceeeeecccccCCcceeeccccccc-cc--cccccceeeeeeeeec
Confidence 44 568899999999888777655 67888888877666655433222111 1111111 00 011234567899999
Q ss_pred CCCcceeeecCCcceEEEEEcCCccEEE-EecCCeEEEEEcCCCCeE
Q psy9327 238 RKMEPLCNIHENTRVKSGAWDESGVFIY-TTSNHIKYAIVNGDHGII 283 (641)
Q Consensus 238 ~~~~~~~~~~~~~~I~sla~~p~g~~L~-t~s~~~k~~l~~~~~g~I 283 (641)
.+.+....+..+..+.+++|+|+|++|+ +++.++.+.+|+.+++.+
T Consensus 232 ~t~~~~~~~~~~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~ 278 (301)
T d1l0qa2 232 GTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTI 278 (301)
T ss_dssp TTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCeEEEEEcCCCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeE
Confidence 5566677777778899999999999875 666788999999887763
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.79 E-value=6e-18 Score=181.12 Aligned_cols=172 Identities=9% Similarity=0.024 Sum_probs=136.1
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc-----cccccccccCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL-----LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~-----l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
+.+++.|. .+..++|||||+++++++.||+|++||+.+++. +.....|.+.+.+.+|+|||+++++++
T Consensus 55 ~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~------ 127 (432)
T d1qksa2 55 KTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGA------ 127 (432)
T ss_dssp EEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEE------
T ss_pred EEEEeCCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEc------
Confidence 56777774 699999999999999999999999999988763 223346777778888899999875544
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccC-----------CCCeEEEEEccCCCEE-EEEeCCCe
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH-----------LDYIRTTFFHHEYPWI-LSASDDQT 144 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h-----------~~~V~~v~fsp~~~~l-~sgs~Dg~ 144 (641)
+.+++|++||..+++++..+..| .+....+.++|+++.+ ++.++++.
T Consensus 128 ---------------------~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~ 186 (432)
T d1qksa2 128 ---------------------YWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 186 (432)
T ss_dssp ---------------------EETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred ---------------------CCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCe
Confidence 38999999999999998887653 3456778999998865 56777899
Q ss_pred EEEEECCCCeeEEEEc-cCCCCEEEEEEecCCCEEEEEeC-CCeEEEEecCCCceeeec
Q psy9327 145 IRIWYWQSRNCICVLT-GHNHYVMCAQFHPTDDIVVSASL-DQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 145 I~vWd~~~~~~i~~l~-~h~~~V~sl~fsp~g~~lvSgs~-DgtI~IWD~~~~~~~~~~ 201 (641)
|.+||..+.+...... .+...+..++|+|+|+++++++. ++.+.+||..+++.....
T Consensus 187 i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~ 245 (432)
T d1qksa2 187 ILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIE 245 (432)
T ss_dssp EEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred EEEEEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeecccceEEEEe
Confidence 9999998876544332 35667899999999998777665 568999999887766544
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.79 E-value=6.3e-18 Score=171.27 Aligned_cols=152 Identities=5% Similarity=-0.079 Sum_probs=126.0
Q ss_pred CeEEEEeCCCcEEEEECccCcccccccc--cccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeC
Q psy9327 22 PWILSSLHNGVIQLWDYRMNTLLEKFDE--HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGD 99 (641)
Q Consensus 22 ~~Lasg~~dg~I~iWD~~~~~~l~~~~~--h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 99 (641)
+++++++.|++|++||+.+++.+..+.. +...+.+++|+|||+++++++ +.
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~---------------------------~~ 54 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATV---------------------------NK 54 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEE---------------------------TT
T ss_pred eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEE---------------------------CC
Confidence 5799999999999999999999888864 345678999999999875443 28
Q ss_pred CCeEEEEECCCCeeEEEEccCCC-----CeEEEEEccCCCEEEEEe------------CCCeEEEEECCCCeeEEEEccC
Q psy9327 100 DYKIKVWNYKQRKCIFTLLGHLD-----YIRTTFFHHEYPWILSAS------------DDQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 100 Dg~I~vWD~~t~~~~~~~~~h~~-----~V~~v~fsp~~~~l~sgs------------~Dg~I~vWd~~~~~~i~~l~~h 162 (641)
++.|.+||+.+++.+..+..+.. .+..++|+|+++.+++++ .+..+.+||..+++....+..
T Consensus 55 ~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~- 133 (337)
T d1pbyb_ 55 SESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA- 133 (337)
T ss_dssp TTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-
T ss_pred CCeEEEEECCCCcEEEEEecCCCcccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccc-
Confidence 99999999999999998876644 345789999999988776 467899999999999888874
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~ 203 (641)
...+.+++|+|+|.++++++.| +.+||..+++.....+.
T Consensus 134 ~~~~~~~~~s~dg~~l~~~~~~--~~~~d~~~~~~~~~~~~ 172 (337)
T d1pbyb_ 134 PRQITMLAWARDGSKLYGLGRD--LHVMDPEAGTLVEDKPI 172 (337)
T ss_dssp CSSCCCEEECTTSSCEEEESSS--EEEEETTTTEEEEEECS
T ss_pred cCCceEEEEcCCCCEEEEEcCC--cceeeeecCcEEEEeec
Confidence 4668899999999999998755 67899998877766543
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.78 E-value=2.4e-16 Score=157.15 Aligned_cols=264 Identities=9% Similarity=0.042 Sum_probs=191.1
Q ss_pred EEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEE
Q psy9327 25 LSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIK 104 (641)
Q Consensus 25 asg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~ 104 (641)
++++.|++|.+||..+++.+.++... ..+.+++|+|+|+++++++ +.++.|+
T Consensus 6 V~~~~~~~v~v~D~~t~~~~~~i~~g-~~p~~va~spdG~~l~v~~---------------------------~~~~~i~ 57 (301)
T d1l0qa2 6 IANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVAN---------------------------AHSNDVS 57 (301)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEE---------------------------GGGTEEE
T ss_pred EEECCCCEEEEEECCCCeEEEEEECC-CCceEEEEeCCCCEEEEEE---------------------------CCCCEEE
Confidence 46678999999999999998888644 5578999999999876544 2889999
Q ss_pred EEECCCCeeEEEEccCCCCeEEEEEccCCCEE-EEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEE-EEe
Q psy9327 105 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWI-LSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVV-SAS 182 (641)
Q Consensus 105 vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l-~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lv-Sgs 182 (641)
+||+.+++.+.++..|.. +..++|++++..+ +++..++.+.+|+..+++....+..+ ..+.++.|+|++..++ +++
T Consensus 58 v~d~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dg~~~~~~~~ 135 (301)
T d1l0qa2 58 IIDTATNNVIATVPAGSS-PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNN 135 (301)
T ss_dssp EEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEET
T ss_pred EEECCCCceeeeeecccc-ccccccccccccccccccccceeeecccccceeeeecccc-ccceEEEeecCCCeeeeeec
Confidence 999999999999987765 5789999999855 55667889999999999988888754 5678899999998764 566
Q ss_pred CCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC-CcceeeecCCcceEEEEEcCCc
Q psy9327 183 LDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK-MEPLCNIHENTRVKSGAWDESG 261 (641)
Q Consensus 183 ~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~-~~~~~~~~~~~~I~sla~~p~g 261 (641)
.++.+.+|+..+.+....+..+.... .+. .++-... .+.+....+.+.+|+.. ...............++++++|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 211 (301)
T d1l0qa2 136 GDKTVSVINTVTKAVINTVSVGRSPK-GIA-VTPDGTK--VYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEG 211 (301)
T ss_dssp TTTEEEEEETTTTEEEEEEECCSSEE-EEE-ECTTSSE--EEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTS
T ss_pred cccceeeeeccccceeeecccCCCce-EEE-eeccccc--eeeecccccccccccccceeeeecccccCCcceeeccccc
Confidence 78899999999988887776443221 111 1110000 02233455667777744 3444445556778889999999
Q ss_pred cEEEEec---CCeEEEEEcCCCCeEe-ccc---cceE-EEEEcCcEEE-EEeCCCCeEEEEeCCcchhhh
Q psy9327 262 VFIYTTS---NHIKYAIVNGDHGIIR-TLD---LPIY-ITKIKGNQVY-YLDRECSPHVLRIDPTEFKFK 322 (641)
Q Consensus 262 ~~L~t~s---~~~k~~l~~~~~g~I~-~~d---~p~~-~~~~~g~~v~-~~~~dg~i~v~~~~~~~~~~k 322 (641)
..++.++ ..+.+.+|+..++.+. .++ .|.. .+..+|..++ +...++.+++|+..+++..-.
T Consensus 212 ~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~ 281 (301)
T d1l0qa2 212 TKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITAT 281 (301)
T ss_dssp SEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cccccccccceeeeeeeeecCCCeEEEEEcCCCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEE
Confidence 9887654 3467899998776543 332 2222 2445677774 666789999999988765533
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.74 E-value=1.8e-17 Score=168.55 Aligned_cols=159 Identities=6% Similarity=-0.060 Sum_probs=123.4
Q ss_pred EEEccCCCeEEEEeCCCcEEEEECccCccccccc-ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceee
Q psy9327 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD-EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRI 93 (641)
Q Consensus 15 l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~-~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~ 93 (641)
++|+++++++++++.|++|.+||+.+++.+.++. .|...+.+++|+|||+++++++
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~----------------------- 58 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLN----------------------- 58 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEE-----------------------
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEE-----------------------
Confidence 5789999999999999999999999999998886 4566788999999999876554
Q ss_pred EEEeeCCCeEEEEECCCCeeEEEEccCC------CCeEEEEEccCCCEEEEEe------------CCCeEEEEECCCCee
Q psy9327 94 KSVLGDDYKIKVWNYKQRKCIFTLLGHL------DYIRTTFFHHEYPWILSAS------------DDQTIRIWYWQSRNC 155 (641)
Q Consensus 94 ~~~~s~Dg~I~vWD~~t~~~~~~~~~h~------~~V~~v~fsp~~~~l~sgs------------~Dg~I~vWd~~~~~~ 155 (641)
+.++.|.+||+.+++.+..+.... ..+..++|+|+|.++++++ .+..+.+||..+++.
T Consensus 59 ----~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 134 (346)
T d1jmxb_ 59 ----NHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE 134 (346)
T ss_dssp ----TTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG
T ss_pred ----CCCCcEEEEeCccCeeeeeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEeccccee
Confidence 278999999999999988776432 2356799999999887765 477899999887764
Q ss_pred EEEEcc--CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC
Q psy9327 156 ICVLTG--HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203 (641)
Q Consensus 156 i~~l~~--h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~ 203 (641)
...+.. ....+..+.+++++..+++ ++.+.+||+.+++....+..
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 181 (346)
T d1jmxb_ 135 AKPVRTFPMPRQVYLMRAADDGSLYVA---GPDIYKMDVKTGKYTVALPL 181 (346)
T ss_dssp BCCSEEEECCSSCCCEEECTTSCEEEE---SSSEEEECTTTCCEEEEECS
T ss_pred eeEEEeeeccCceEEEEecCCCEEEEe---CCcceEEEccCCCEEEEEec
Confidence 433322 2344556677777776654 24689999988887776653
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.73 E-value=1.1e-16 Score=170.50 Aligned_cols=286 Identities=7% Similarity=-0.005 Sum_probs=188.2
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccc-----cccccccCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLE-----KFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~-----~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
+.+++.|. .+.+++|||||+++++++.||+|++||+.+++... ...+|.+.+.+++|+|||+++++++
T Consensus 55 ~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~------ 127 (426)
T d1hzua2 55 VKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGA------ 127 (426)
T ss_dssp EEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEE------
T ss_pred EEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEee------
Confidence 56777774 59999999999999999999999999999886432 2346777788889999999987776
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCe-----------EEEEEccCCCEEEEEe-CCCe
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYI-----------RTTFFHHEYPWILSAS-DDQT 144 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V-----------~~v~fsp~~~~l~sgs-~Dg~ 144 (641)
..++.+.+||..++.++..+..|...+ ..+.+++++..++... ..+.
T Consensus 128 ---------------------~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~ 186 (426)
T d1hzua2 128 ---------------------YWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGK 186 (426)
T ss_dssp ---------------------EESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred ---------------------cCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCe
Confidence 389999999999999988887665444 4445555555443332 3345
Q ss_pred EEEEECCCCee-EEEEccCCCCEEEEEEecCCCEEEEEe-CCCeEEEEecCCCceeeeccCCCce--eee--cccCCCce
Q psy9327 145 IRIWYWQSRNC-ICVLTGHNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDISGLRKKNVAPGMGKL--VLS--MKSKHPIW 218 (641)
Q Consensus 145 I~vWd~~~~~~-i~~l~~h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~~~~~~~~~~~~~~--v~s--~~~~~~v~ 218 (641)
+.+++..+... .....++...+..+.|+|+++++++++ .+..+.+||..+++........... ... ....+...
T Consensus 187 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (426)
T d1hzua2 187 VLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGP 266 (426)
T ss_dssp EEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEE
T ss_pred EEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCc
Confidence 55555544332 223346778899999999998777665 5668999999998887666532111 000 00001000
Q ss_pred eeeeeeeeeCCCeeEEEecCCC--------cceeeec-CCcceEEEEEcCCccEEEE-------ecCCeEEEEEcCCCCe
Q psy9327 219 KYCKPVKYCNPKHTLHICNRKM--------EPLCNIH-ENTRVKSGAWDESGVFIYT-------TSNHIKYAIVNGDHGI 282 (641)
Q Consensus 219 ~~~~~l~s~~~d~~I~i~d~~~--------~~~~~~~-~~~~I~sla~~p~g~~L~t-------~s~~~k~~l~~~~~g~ 282 (641)
........++.+..|+... .....+. +...+.+++|+|+|.+++. ++.++.+.+|+.+++.
T Consensus 267 ---~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~ 343 (426)
T d1hzua2 267 ---VWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLD 343 (426)
T ss_dssp ---EEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTT
T ss_pred ---eEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCC
Confidence 0012334677787777322 2233333 3677899999999999995 3346678899876653
Q ss_pred Ee--cc---------ccc--eE--EEEEcCcEEEEE-----eCCCCeEEEEeCCcc
Q psy9327 283 IR--TL---------DLP--IY--ITKIKGNQVYYL-----DRECSPHVLRIDPTE 318 (641)
Q Consensus 283 I~--~~---------d~p--~~--~~~~~g~~v~~~-----~~dg~i~v~~~~~~~ 318 (641)
.. .+ +.. +. .+..+|..++.. +.++.+++|+..+.+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k 399 (426)
T d1hzua2 344 AKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 399 (426)
T ss_dssp SCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTE
T ss_pred cCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCe
Confidence 11 11 000 11 245677766432 367889999877765
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.67 E-value=1.1e-15 Score=163.39 Aligned_cols=194 Identities=13% Similarity=0.061 Sum_probs=145.8
Q ss_pred ccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEe
Q psy9327 18 HPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVL 97 (641)
Q Consensus 18 spdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (641)
+++.-++++.+.||+|.+||..+++.+.++..+ ..+..++|+|||+++++++
T Consensus 29 ~~~~~~~v~~~d~g~v~v~D~~t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s--------------------------- 80 (432)
T d1qksa2 29 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIG--------------------------- 80 (432)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEE---------------------------
T ss_pred CCCcEEEEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEc---------------------------
Confidence 333334688899999999999999999999877 4689999999999999997
Q ss_pred eCCCeEEEEECCCCeeE--EEE---ccCCCCeEEEEEccCCCEE-EEEeCCCeEEEEECCCCeeEEEEccC---------
Q psy9327 98 GDDYKIKVWNYKQRKCI--FTL---LGHLDYIRTTFFHHEYPWI-LSASDDQTIRIWYWQSRNCICVLTGH--------- 162 (641)
Q Consensus 98 s~Dg~I~vWD~~t~~~~--~~~---~~h~~~V~~v~fsp~~~~l-~sgs~Dg~I~vWd~~~~~~i~~l~~h--------- 162 (641)
.|++|++||+.+++.. ..+ .+|.+.+.+.+|+|||+++ ++++.+++|++||..+++++..+..|
T Consensus 81 -~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~ 159 (432)
T d1qksa2 81 -RDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEY 159 (432)
T ss_dssp -TTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCE
T ss_pred -CCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceec
Confidence 8999999999887632 222 3566667777888999975 78889999999999999998887654
Q ss_pred --CCCEEEEEEecCCCE-EEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC
Q psy9327 163 --NHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK 239 (641)
Q Consensus 163 --~~~V~sl~fsp~g~~-lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~ 239 (641)
......+.++|++.. +++.+.++.|.+||..+.+....
T Consensus 160 ~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~--------------------------------------- 200 (432)
T d1qksa2 160 HPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKT--------------------------------------- 200 (432)
T ss_dssp ESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEE---------------------------------------
T ss_pred cCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceE---------------------------------------
Confidence 344567788888765 45666778888888776443221
Q ss_pred CcceeeecCCcceEEEEEcCCccEEEEecC-CeEEEEEcCCCCeE
Q psy9327 240 MEPLCNIHENTRVKSGAWDESGVFIYTTSN-HIKYAIVNGDHGII 283 (641)
Q Consensus 240 ~~~~~~~~~~~~I~sla~~p~g~~L~t~s~-~~k~~l~~~~~g~I 283 (641)
..+..+..+..++|+|+|+++++++. ...+.+++.+.+.+
T Consensus 201 ----~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~ 241 (432)
T d1qksa2 201 ----TEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL 241 (432)
T ss_dssp ----EEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred ----EEEcccCccccceECCCCCEEEEeccccceEEEeecccceE
Confidence 12223455677899999998877764 44555666655543
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.66 E-value=7.6e-16 Score=163.74 Aligned_cols=147 Identities=13% Similarity=0.077 Sum_probs=112.1
Q ss_pred EccCCC--eEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeE
Q psy9327 17 FHPKRP--WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIK 94 (641)
Q Consensus 17 fspdg~--~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~ 94 (641)
++++.. ++++.+.||+|++||..+++.+.++..|. .+.+++|||||+++++++
T Consensus 26 ~~~d~~~~~~V~~~~dg~v~vwD~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~------------------------ 80 (426)
T d1hzua2 26 NDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIG------------------------ 80 (426)
T ss_dssp SCCCGGGEEEEEETTTTEEEEEETTTCSEEEEEECCS-SEEEEEECTTSCEEEEEE------------------------
T ss_pred ccCCCCeEEEEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEe------------------------
Confidence 444433 56778889999999999999999998774 589999999999999997
Q ss_pred EEeeCCCeEEEEECCCCeeEEEE-----ccCCCCeEEEEEccCCCEE-EEEeCCCeEEEEECCCCeeEEEEccCCCCEEE
Q psy9327 95 SVLGDDYKIKVWNYKQRKCIFTL-----LGHLDYIRTTFFHHEYPWI-LSASDDQTIRIWYWQSRNCICVLTGHNHYVMC 168 (641)
Q Consensus 95 ~~~s~Dg~I~vWD~~t~~~~~~~-----~~h~~~V~~v~fsp~~~~l-~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~s 168 (641)
.|++|++||+.+++..... .+|.+.+.+++|+|||+++ +++..++++++||..++.++..+.+|...+..
T Consensus 81 ----~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~ 156 (426)
T d1hzua2 81 ----RDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDT 156 (426)
T ss_dssp ----TTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSS
T ss_pred ----CCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccc
Confidence 8999999999998754332 3566677788889999986 45568999999999999999888877665555
Q ss_pred EEEecCCC-EEEEEeCCCeEEEEec
Q psy9327 169 AQFHPTDD-IVVSASLDQTIRVWDI 192 (641)
Q Consensus 169 l~fsp~g~-~lvSgs~DgtI~IWD~ 192 (641)
..|.+++. ..+.++.|+...+|..
T Consensus 157 ~~~~~~~~~~~i~~s~d~~~~~~~~ 181 (426)
T d1hzua2 157 QTYHPEPRVAAIIASHEHPEFIVNV 181 (426)
T ss_dssp CCEESCCCEEEEEECSSSSEEEEEE
T ss_pred eeecCCCceeEEEECCCCCEEEEec
Confidence 55555553 2344444554444443
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.64 E-value=4.1e-14 Score=145.99 Aligned_cols=172 Identities=8% Similarity=-0.105 Sum_probs=129.8
Q ss_pred ccCCCCeEEEEEccCCCeEEEEe-----CCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 6 ETKSARVKGLSFHPKRPWILSSL-----HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~~Lasg~-----~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
..+..++.+++++|||+.++... .++.|.+||..+++.+.++..+..+ .++|+|||+++++++.
T Consensus 17 ~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~--------- 85 (373)
T d2madh_ 17 GAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALAST--------- 85 (373)
T ss_pred ccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCCc--cEEEcCCCCEEEEEee---------
Confidence 46788999999999999887652 3467999999999999888766554 7999999999998851
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCe-------EEEEEccCCCEEEEE--eCCCeEEEEECC
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYI-------RTTFFHHEYPWILSA--SDDQTIRIWYWQ 151 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V-------~~v~fsp~~~~l~sg--s~Dg~I~vWd~~ 151 (641)
.......++.++.|.+||..+++.+..+..+.... ..+.|++++..++.. ..++.+.+|+..
T Consensus 86 ---------~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~ 156 (373)
T d2madh_ 86 ---------SFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQG 156 (373)
T ss_pred ---------cCCcccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeecc
Confidence 00111122367899999999999998887766543 457888888866544 446788899988
Q ss_pred CCeeEEEEccCCCCEEEEEEecCCCE-EEEEeCCCeEEEEecCCCceeeec
Q psy9327 152 SRNCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 152 ~~~~i~~l~~h~~~V~sl~fsp~g~~-lvSgs~DgtI~IWD~~~~~~~~~~ 201 (641)
+.+.... .....++.|+|+++. +++.+.|+++.+||..++......
T Consensus 157 ~~~~~~~----~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~ 203 (373)
T d2madh_ 157 GSSDDQL----LSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGL 203 (373)
T ss_pred CCeEEEE----eccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEE
Confidence 7765433 344678899999864 578899999999999877665543
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.62 E-value=2.2e-14 Score=144.95 Aligned_cols=146 Identities=10% Similarity=0.154 Sum_probs=111.1
Q ss_pred eEEEEeCCCcEEEEECccCcccccc--cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCC
Q psy9327 23 WILSSLHNGVIQLWDYRMNTLLEKF--DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDD 100 (641)
Q Consensus 23 ~Lasg~~dg~I~iWD~~~~~~l~~~--~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~D 100 (641)
.+++++.|++|++||+.+...+..+ ..|.+.+.+|+|+|||++|++++ ..|
T Consensus 6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~---------------------------~~d 58 (333)
T d1ri6a_ 6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGV---------------------------RPE 58 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEE---------------------------TTT
T ss_pred EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEE---------------------------CCC
Confidence 4577889999999999765433333 26889999999999999997665 279
Q ss_pred CeEEEEECCCCeeEEEEc---cCCCCeEEEEEccCCCEEEEEe-CCCeEEEEECCCCeeEE--EEccCCCCEEEEEEecC
Q psy9327 101 YKIKVWNYKQRKCIFTLL---GHLDYIRTTFFHHEYPWILSAS-DDQTIRIWYWQSRNCIC--VLTGHNHYVMCAQFHPT 174 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~~---~h~~~V~~v~fsp~~~~l~sgs-~Dg~I~vWd~~~~~~i~--~l~~h~~~V~sl~fsp~ 174 (641)
+.|++|++.......++. .+...+..++|+|+|+++++++ .+++|.+|+........ ....+...+.++.|+|+
T Consensus 59 ~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d 138 (333)
T d1ri6a_ 59 FRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPD 138 (333)
T ss_dssp TEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTT
T ss_pred CeEEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeec
Confidence 999999998664333222 2445567899999999988887 47799999987765433 34467778889999999
Q ss_pred CCEEEEEeC-CCeEEEEecCCC
Q psy9327 175 DDIVVSASL-DQTIRVWDISGL 195 (641)
Q Consensus 175 g~~lvSgs~-DgtI~IWD~~~~ 195 (641)
++.+++++. +..+.+|+....
T Consensus 139 ~~~~~~~~~~~~~i~~~~~~~~ 160 (333)
T d1ri6a_ 139 NRTLWVPALKQDRICLFTVSDD 160 (333)
T ss_dssp SSEEEEEEGGGTEEEEEEECTT
T ss_pred ceeeeccccccceeeEEEeccC
Confidence 998877764 567999998654
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.58 E-value=2.6e-14 Score=144.11 Aligned_cols=193 Identities=9% Similarity=0.008 Sum_probs=135.2
Q ss_pred CCCCeEEEEEccCCCeE-EEEeCCCcEEEEECccCcccccccccc-----cCeEEEEEeCCCCEEEEeceeeEE------
Q psy9327 8 KSARVKGLSFHPKRPWI-LSSLHNGVIQLWDYRMNTLLEKFDEHE-----GPVRGICFHNQQPIFVSGGKMIVM------ 75 (641)
Q Consensus 8 H~~~V~~l~fspdg~~L-asg~~dg~I~iWD~~~~~~l~~~~~h~-----~~V~~i~fsp~~~~l~sgs~~~~~------ 75 (641)
+...+.+++|+|||+++ ++++.++.|.+||+.+++.+.++..+. ..+.+++|+|++.++++++.....
T Consensus 32 ~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~ 111 (337)
T d1pbyb_ 32 AGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFE 111 (337)
T ss_dssp CTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEE
T ss_pred CCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccccceeeEEEcCCCcEEEEeecCCcceeeecc
Confidence 44568899999999987 466789999999999999888776543 345679999999999888632111
Q ss_pred -------eee---ceeeecccCCcceeeEE-------EeeCCCeEEEEECCCCeeEEEEc--------------------
Q psy9327 76 -------AYQ---GCILESRNEPCLFRIKS-------VLGDDYKIKVWNYKQRKCIFTLL-------------------- 118 (641)
Q Consensus 76 -------~~~---~~~~~~~~~~~~~~~~~-------~~s~Dg~I~vWD~~t~~~~~~~~-------------------- 118 (641)
.++ +.+......+......+ ....++.+.+||..+++....+.
T Consensus 112 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (337)
T d1pbyb_ 112 VQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQ 191 (337)
T ss_dssp ECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCC
T ss_pred ccccceeeccccCCeEEEeccccCCceEEEEcCCCCEEEEEcCCcceeeeecCcEEEEeecCCccccceecCCcceeecc
Confidence 111 11111111111111111 11234567889987766554432
Q ss_pred ----------------------------------------------cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCC
Q psy9327 119 ----------------------------------------------GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152 (641)
Q Consensus 119 ----------------------------------------------~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~ 152 (641)
.+...+..++++|++.+++++ ++.|++||+++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~ 269 (337)
T d1pbyb_ 192 HESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK 269 (337)
T ss_dssp CTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTT
T ss_pred ccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccceEEEEc--cccEEEEECCC
Confidence 122334555666777766655 58999999999
Q ss_pred CeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC
Q psy9327 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203 (641)
Q Consensus 153 ~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~ 203 (641)
++.+..+. +...+.+++|+|+|+.|++++.|++|++||..+++.+..+.-
T Consensus 270 ~~~~~~~~-~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v~~i~~ 319 (337)
T d1pbyb_ 270 NASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp TEEEEEEE-CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred CcEEEEEc-CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcEEEEEEC
Confidence 99998885 667889999999999999999999999999999998877653
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.53 E-value=2.7e-13 Score=138.40 Aligned_cols=257 Identities=9% Similarity=0.013 Sum_probs=164.0
Q ss_pred CeEEEEEccCCCeEEEEe-----CCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 11 RVKGLSFHPKRPWILSSL-----HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~-----~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
++.-.+.+||++++++.. .+++|.+||..+++.+.++..+..+ .++|+|||+++++++..
T Consensus 3 p~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~--~~a~SpDg~~l~v~~~~------------- 67 (355)
T d2bbkh_ 3 PRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTV------------- 67 (355)
T ss_dssp CCBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEE-------------
T ss_pred CcEeEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCCC--ceEEcCCCCEEEEEeCC-------------
Confidence 334446789999987763 3567999999999998888665554 79999999988776410
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC-------CeEEEEEccCCCEEEEEe--CCCeEEEEECCCCeeE
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD-------YIRTTFFHHEYPWILSAS--DDQTIRIWYWQSRNCI 156 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~-------~V~~v~fsp~~~~l~sgs--~Dg~I~vWd~~~~~~i 156 (641)
......+..|+.|++||..+++.+..+..+.. ....++|+|++.+++.++ .+..+.+||..+++.+
T Consensus 68 -----~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~ 142 (355)
T d2bbkh_ 68 -----FSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFK 142 (355)
T ss_dssp -----EEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred -----CccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEe
Confidence 01111223688999999999998887764432 235689999999877664 5678999999988766
Q ss_pred EEEccCCC---------------------------------------------CEEEEEEecCCCEEEEEeCCCeEEEEe
Q psy9327 157 CVLTGHNH---------------------------------------------YVMCAQFHPTDDIVVSASLDQTIRVWD 191 (641)
Q Consensus 157 ~~l~~h~~---------------------------------------------~V~sl~fsp~g~~lvSgs~DgtI~IWD 191 (641)
..+..+.. .+....+.+++..++.++.++++.+|+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 222 (355)
T d2bbkh_ 143 RMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQID 222 (355)
T ss_dssp EEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEE
T ss_pred eEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccceecceeeeccccCCCCeEEEecCCCeEEEEe
Confidence 55432211 112234455555667777788888888
Q ss_pred cCCCceeeecc--CCC------------ceeeecccCCC-ceeeee---eeeeeCCCeeEEEec-CCCcceeeecCCcce
Q psy9327 192 ISGLRKKNVAP--GMG------------KLVLSMKSKHP-IWKYCK---PVKYCNPKHTLHICN-RKMEPLCNIHENTRV 252 (641)
Q Consensus 192 ~~~~~~~~~~~--~~~------------~~v~s~~~~~~-v~~~~~---~l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I 252 (641)
+.+++...... .+. ........... ++-... ..........+.+|| .+.+.+..+..+..+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~~~~ 302 (355)
T d2bbkh_ 223 LSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEI 302 (355)
T ss_dssp CTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred cCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecCCCCE
Confidence 87654322111 110 00000000000 000000 011122456899999 556667777777788
Q ss_pred EEEEEcCCcc--EEEEecCCeEEEEEcCCCCe-Eeccc
Q psy9327 253 KSGAWDESGV--FIYTTSNHIKYAIVNGDHGI-IRTLD 287 (641)
Q Consensus 253 ~sla~~p~g~--~L~t~s~~~k~~l~~~~~g~-I~~~d 287 (641)
.+++|+|+|+ +++++..++.+.+|+.++|. ++.++
T Consensus 303 ~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~ 340 (355)
T d2bbkh_ 303 DSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN 340 (355)
T ss_dssp CEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred EEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEe
Confidence 9999999997 44566678899999987775 44443
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.46 E-value=2.3e-12 Score=129.97 Aligned_cols=237 Identities=7% Similarity=-0.078 Sum_probs=160.3
Q ss_pred EEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc-cCCCCeEEEEEccCCCE
Q psy9327 57 ICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL-GHLDYIRTTFFHHEYPW 135 (641)
Q Consensus 57 i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~-~h~~~V~~v~fsp~~~~ 135 (641)
++|+++++++++++ .|++|.+||+.+++.+.++. .|...+.+++|+|||++
T Consensus 2 ~a~~~~~~~l~~~~----------------------------~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~ 53 (346)
T d1jmxb_ 2 PALKAGHEYMIVTN----------------------------YPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRT 53 (346)
T ss_dssp CCCCTTCEEEEEEE----------------------------TTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSE
T ss_pred ccCCCCCcEEEEEc----------------------------CCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCE
Confidence 57899999999998 99999999999999999887 45667889999999997
Q ss_pred E-EEEeCCCeEEEEECCCCeeEEEEccCC------CCEEEEEEecCCCEEEEEe------------CCCeEEEEecCCCc
Q psy9327 136 I-LSASDDQTIRIWYWQSRNCICVLTGHN------HYVMCAQFHPTDDIVVSAS------------LDQTIRVWDISGLR 196 (641)
Q Consensus 136 l-~sgs~Dg~I~vWd~~~~~~i~~l~~h~------~~V~sl~fsp~g~~lvSgs------------~DgtI~IWD~~~~~ 196 (641)
+ ++++.++.|++||+.+++.+..+.... ..+..++|+|||.++++++ .++.+.+||..+++
T Consensus 54 l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 133 (346)
T d1jmxb_ 54 AYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 133 (346)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred EEEEECCCCcEEEEeCccCeeeeeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccce
Confidence 6 566789999999999999887775332 2356789999999887765 47889999998766
Q ss_pred eeeeccCC-------------Cceeeecc---------cCCCceee---------eee----------------------
Q psy9327 197 KKNVAPGM-------------GKLVLSMK---------SKHPIWKY---------CKP---------------------- 223 (641)
Q Consensus 197 ~~~~~~~~-------------~~~v~s~~---------~~~~v~~~---------~~~---------------------- 223 (641)
....+..+ +..+.... ....+..+ .+.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (346)
T d1jmxb_ 134 EAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTI 213 (346)
T ss_dssp GBCCSEEEECCSSCCCEEECTTSCEEEESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEE
T ss_pred eeeEEEeeeccCceEEEEecCCCEEEEeCCcceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeee
Confidence 54433210 01010000 00000000 000
Q ss_pred ---------eeeeCCCeeEEEecCCC-cce--eeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eeccccc-
Q psy9327 224 ---------VKYCNPKHTLHICNRKM-EPL--CNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDLP- 289 (641)
Q Consensus 224 ---------l~s~~~d~~I~i~d~~~-~~~--~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~p- 289 (641)
+.+...++.+.+||... ... ....+...+.++.+++++.+++.... +.+.+|+..++. ++..+.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~~~~ 292 (346)
T d1jmxb_ 214 ARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRKLIKAANLDH 292 (346)
T ss_dssp EEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEEE-SEEEEEETTTTEEEEEEECSS
T ss_pred eeeccCceeEeeccCCceEEEEECCCCceEEEEeecccceeEEEEEeCCCCEEEEecC-CeEEEEECCCCcEEEEEcCCC
Confidence 11222345567777332 222 22234667888899988877776654 357888877765 3333221
Q ss_pred ---eEEEEEcCcEEEEEeCCCCeEEEEeCCcchhhh
Q psy9327 290 ---IYITKIKGNQVYYLDRECSPHVLRIDPTEFKFK 322 (641)
Q Consensus 290 ---~~~~~~~g~~v~~~~~dg~i~v~~~~~~~~~~k 322 (641)
-..+..+|..++.++.|+.+++|+..+.+..-+
T Consensus 293 ~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~ 328 (346)
T d1jmxb_ 293 TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKN 328 (346)
T ss_dssp CCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEE
T ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEECccCCEEEE
Confidence 223556889999999999999999988766543
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.42 E-value=1.1e-11 Score=127.28 Aligned_cols=202 Identities=5% Similarity=-0.112 Sum_probs=127.1
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEe----------CCCcEEEEECccCcccccccccccCe-------EEEEEeCCCCE
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSL----------HNGVIQLWDYRMNTLLEKFDEHEGPV-------RGICFHNQQPI 65 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~----------~dg~I~iWD~~~~~~l~~~~~h~~~V-------~~i~fsp~~~~ 65 (641)
.++..+..+ .++|+|||+++++++ .++.|.+||..+++.+..+..+.... ..+.|++++..
T Consensus 61 ~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 138 (373)
T d2madh_ 61 GHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNAD 138 (373)
T ss_pred EEEeCCCCc--cEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCc
Confidence 445555443 799999999998875 35789999999998887776554433 45677887776
Q ss_pred EEEecee---eEEeee---c-------eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE---------------
Q psy9327 66 FVSGGKM---IVMAYQ---G-------CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL--------------- 117 (641)
Q Consensus 66 l~sgs~~---~~~~~~---~-------~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~--------------- 117 (641)
++..... ....++ . ........+......++.+.|+++.+||...++.....
T Consensus 139 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (373)
T d2madh_ 139 LLFFQFAAGPAVGLVVQGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQP 218 (373)
T ss_pred EEEEEEcCCCceEEeeccCCeEEEEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeee
Confidence 5544310 000110 0 00111112222333445555566666655433222111
Q ss_pred ----------------------------------ccCC----------CCeEEEEEccCCCEE----------EEEeCCC
Q psy9327 118 ----------------------------------LGHL----------DYIRTTFFHHEYPWI----------LSASDDQ 143 (641)
Q Consensus 118 ----------------------------------~~h~----------~~V~~v~fsp~~~~l----------~sgs~Dg 143 (641)
..+. .....+++++++..+ ++...++
T Consensus 219 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 298 (373)
T d2madh_ 219 AQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAK 298 (373)
T ss_pred EEECCCceEEEecCCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCC
Confidence 1111 112234455555433 3455667
Q ss_pred eEEEEECCCCeeEEEEccCCCCEEEEEEecCCC--EEEEEeCCCeEEEEecCCCceeeeccCCCce
Q psy9327 144 TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD--IVVSASLDQTIRVWDISGLRKKNVAPGMGKL 207 (641)
Q Consensus 144 ~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~--~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~ 207 (641)
.+.+||..+++.+..+. +...+.+++|+|||+ ++++++.|++|++||..+++.+..+.+++..
T Consensus 299 ~v~~~d~~t~~~~~~~~-~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~ 363 (373)
T d2madh_ 299 EVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSG 363 (373)
T ss_pred eEEEEECCCCcEEEEec-CCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCCC
Confidence 89999999999888775 667899999999998 4578899999999999999999998866544
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.26 E-value=5.4e-11 Score=119.41 Aligned_cols=64 Identities=11% Similarity=0.181 Sum_probs=50.5
Q ss_pred cCCCCeEEEEEccCCCeEEEEe-CCCcEEEEECccCccccccc---ccccCeEEEEEeCCCCEEEEec
Q psy9327 7 TKSARVKGLSFHPKRPWILSSL-HNGVIQLWDYRMNTLLEKFD---EHEGPVRGICFHNQQPIFVSGG 70 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~-~dg~I~iWD~~~~~~l~~~~---~h~~~V~~i~fsp~~~~l~sgs 70 (641)
.|.+.|.+|+|||||++|++++ .|+.|++|++.......++. .+...+.+++|+|||+++++++
T Consensus 34 ~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~~l~v~~ 101 (333)
T d1ri6a_ 34 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGS 101 (333)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEE
T ss_pred cCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCCEEeecc
Confidence 5788999999999999986555 58999999997665433332 2345567899999999999886
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.22 E-value=1.1e-10 Score=120.37 Aligned_cols=251 Identities=8% Similarity=-0.113 Sum_probs=157.2
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEe----------CCCcEEEEECccCccccccccccc-------CeEEEEEeCCCCEE
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSL----------HNGVIQLWDYRMNTLLEKFDEHEG-------PVRGICFHNQQPIF 66 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~----------~dg~I~iWD~~~~~~l~~~~~h~~-------~V~~i~fsp~~~~l 66 (641)
+.+++... .++|+|||+.+++++ .|++|++||..+++.+..+..+.. ....++|+|||+++
T Consensus 61 ~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l 138 (368)
T d1mdah_ 61 HSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACL 138 (368)
T ss_dssp EEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCE
T ss_pred EEeCCCCC--cceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEE
Confidence 34444443 589999999888765 367899999999988777654332 23468999999999
Q ss_pred EEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEE
Q psy9327 67 VSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 146 (641)
Q Consensus 67 ~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~ 146 (641)
+++. ..++.+.+||..+++....+..+.... .+......+++.+.|+++.
T Consensus 139 ~va~---------------------------~~~~~v~~~d~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~Dg~~~ 188 (368)
T d1mdah_ 139 LFFL---------------------------FGSSAAAGLSVPGASDDQLTKSASCFH---IHPGAAATHYLGSCPASLA 188 (368)
T ss_dssp EEEE---------------------------CSSSCEEEEEETTTEEEEEEECSSCCC---CEEEETTEEECCCCTTSCE
T ss_pred EEEe---------------------------CCCCeEEEEECCCCcEeEEeeccCcce---EccCCCceEEEEcCCCCEE
Confidence 8875 268999999999999998887655432 1222345667777788888
Q ss_pred EEECCCCeeEEE------EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc--CC------------Cc
Q psy9327 147 IWYWQSRNCICV------LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP--GM------------GK 206 (641)
Q Consensus 147 vWd~~~~~~i~~------l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~--~~------------~~ 206 (641)
+|+......... +..+...+..+.+++++..+.+. ++.+.++++.......... .. +.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 266 (368)
T d1mdah_ 189 ASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV--ASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGF 266 (368)
T ss_dssp EEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB--SSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSS
T ss_pred EEEecCCceeeeeeecccccccccceeecccccCcEEEEec--CCCEEEEeecCCceEEEeecccccceeeeeeecCCCc
Confidence 888765443222 23445556667777777666544 4556666665543322111 10 00
Q ss_pred eeeecccC-CCceeeeee--eeeeCCCeeEEEec-CCCcceeeecCCcceEEEEEcCCcc-EE-EEecCCeEEEEEcCCC
Q psy9327 207 LVLSMKSK-HPIWKYCKP--VKYCNPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGV-FI-YTTSNHIKYAIVNGDH 280 (641)
Q Consensus 207 ~v~s~~~~-~~v~~~~~~--l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~-~L-~t~s~~~k~~l~~~~~ 280 (641)
........ ..++-.... .........+.+|| ..+..+..+.....+.+++|+|||+ ++ +++..++.+.+|+..+
T Consensus 267 ~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~t 346 (368)
T d1mdah_ 267 QMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp SCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred eeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEecCCCceeEEEECCCCCEEEEEEeCCCCeEEEEECCC
Confidence 00110100 111110000 11112345688999 5566677777777889999999986 34 4556788999999877
Q ss_pred Ce-Eecccc
Q psy9327 281 GI-IRTLDL 288 (641)
Q Consensus 281 g~-I~~~d~ 288 (641)
|. ++.++.
T Consensus 347 gk~~~~i~~ 355 (368)
T d1mdah_ 347 DQDQSSVEL 355 (368)
T ss_dssp CEEEEECCC
T ss_pred CCEEEEEEC
Confidence 75 445544
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.21 E-value=9.9e-11 Score=118.87 Aligned_cols=245 Identities=8% Similarity=-0.032 Sum_probs=154.7
Q ss_pred CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccC
Q psy9327 53 PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE 132 (641)
Q Consensus 53 ~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~ 132 (641)
|+.-.+.+||++.+++.... ....+.+|.+||..+++.+.++..+..+ .++|+||
T Consensus 3 p~~~~a~spdg~~~~v~~~~-----------------------~~~~~~~v~v~D~~tg~~~~~~~~g~~~--~~a~SpD 57 (355)
T d2bbkh_ 3 PRILEAPAPDARRVYVNDPA-----------------------HFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADD 57 (355)
T ss_dssp CCBCCCCCCCTTEEEEEECG-----------------------GGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTT
T ss_pred CcEeEeeCCCCCEEEEEecc-----------------------cCCCcCeEEEEECCCCcEEEEEECCCCC--ceEEcCC
Confidence 44444568899988765300 0014668999999999999998876555 6999999
Q ss_pred CCEEEEE----------eCCCeEEEEECCCCeeEEEEccCCC-------CEEEEEEecCCCEEEEEe--CCCeEEEEecC
Q psy9327 133 YPWILSA----------SDDQTIRIWYWQSRNCICVLTGHNH-------YVMCAQFHPTDDIVVSAS--LDQTIRVWDIS 193 (641)
Q Consensus 133 ~~~l~sg----------s~Dg~I~vWd~~~~~~i~~l~~h~~-------~V~sl~fsp~g~~lvSgs--~DgtI~IWD~~ 193 (641)
|++++++ +.|+.|++||..+++.+..+..+.. ....++|+|++.+++.++ .+..+.+||..
T Consensus 58 g~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~ 137 (355)
T d2bbkh_ 58 GSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE 137 (355)
T ss_dssp SSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETT
T ss_pred CCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecC
Confidence 9987764 3478999999999998877754332 235679999999887765 46789999999
Q ss_pred CCceeeeccCCCceee---------ecccCCC-------------ce--------------eeee-----eeeeeCCCee
Q psy9327 194 GLRKKNVAPGMGKLVL---------SMKSKHP-------------IW--------------KYCK-----PVKYCNPKHT 232 (641)
Q Consensus 194 ~~~~~~~~~~~~~~v~---------s~~~~~~-------------v~--------------~~~~-----~l~s~~~d~~ 232 (641)
+++....+........ ....... +. .... .+..++.++.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (355)
T d2bbkh_ 138 GKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGK 217 (355)
T ss_dssp TTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSE
T ss_pred CCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccceecceeeeccccCCCCeEEEecCCCe
Confidence 9887766543221100 0000000 00 0000 1455567888
Q ss_pred EEEecCCCcceeeecC--------------CcceEEEEEcCCccEEEEecC----------CeEEEEEcCCCCe-Eeccc
Q psy9327 233 LHICNRKMEPLCNIHE--------------NTRVKSGAWDESGVFIYTTSN----------HIKYAIVNGDHGI-IRTLD 287 (641)
Q Consensus 233 I~i~d~~~~~~~~~~~--------------~~~I~sla~~p~g~~L~t~s~----------~~k~~l~~~~~g~-I~~~d 287 (641)
+.+|+........+.. ......+++++++..++..+. ...+.+|+..++. +..+.
T Consensus 218 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~ 297 (355)
T d2bbkh_ 218 IHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE 297 (355)
T ss_dssp EEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE
T ss_pred EEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEec
Confidence 9999844332221110 112234788899888876642 3467888877664 33443
Q ss_pred cc--e--EEEEEcCc-E-EEEEeCCCCeEEEEeCCcchhhh
Q psy9327 288 LP--I--YITKIKGN-Q-VYYLDRECSPHVLRIDPTEFKFK 322 (641)
Q Consensus 288 ~p--~--~~~~~~g~-~-v~~~~~dg~i~v~~~~~~~~~~k 322 (641)
.. . ..+..+|+ . +++...|+.+++|+..+++....
T Consensus 298 ~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~ 338 (355)
T d2bbkh_ 298 MGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRS 338 (355)
T ss_dssp EEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred CCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEE
Confidence 32 1 11334565 3 44566789999999988766543
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.20 E-value=9.9e-11 Score=124.92 Aligned_cols=156 Identities=7% Similarity=0.039 Sum_probs=117.9
Q ss_pred EEEEccCCCeEEEEeCCCcEEEEECccCcccc-----cccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 14 GLSFHPKRPWILSSLHNGVIQLWDYRMNTLLE-----KFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 14 ~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~-----~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
.+.|.+++.++.. .||.+.+||..+++... ++..|...|.++.||||+++|+.++.......
T Consensus 21 ~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r----------- 87 (470)
T d2bgra1 21 SLRWISDHEYLYK--QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWR----------- 87 (470)
T ss_dssp CCEECSSSEEEEE--SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSS-----------
T ss_pred CCEeCCCCEEEEE--cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceee-----------
Confidence 5789999987764 57889999999987643 45566788999999999999998751100000
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc-------
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG------- 161 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~------- 161 (641)
.+.++.+.+||+.+++. ..+..|.+.+..+.|+|||..++... ++.+++|+..+++.......
T Consensus 88 --------~s~~~~~~l~d~~~~~~-~~l~~~~~~~~~~~~SPDG~~ia~~~-~~~l~~~~~~~g~~~~~t~~~~~~~~~ 157 (470)
T d2bgra1 88 --------HSYTASYDIYDLNKRQL-ITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIY 157 (470)
T ss_dssp --------SCEEEEEEEEETTTTEE-CCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEE
T ss_pred --------eccCceEEEEECCCCcc-cccccCCccccccccccCcceeeEee-cccceEEECCCCceeeeeeccCCCccc
Confidence 02467899999999874 55788999999999999999999865 67899999998876654322
Q ss_pred -----------CCCCEEEEEEecCCCEEEEEeCCCe-EEEEec
Q psy9327 162 -----------HNHYVMCAQFHPTDDIVVSASLDQT-IRVWDI 192 (641)
Q Consensus 162 -----------h~~~V~sl~fsp~g~~lvSgs~Dgt-I~IWD~ 192 (641)
+.+....+.|+|||+.|+..+.|.+ +..|++
T Consensus 158 ~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~ 200 (470)
T d2bgra1 158 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEY 200 (470)
T ss_dssp ESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEE
T ss_pred ccccceeeeeeecCCccccEECCCCCccceeEecCCcCceEEE
Confidence 1233456889999999999887654 666654
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.14 E-value=9.4e-10 Score=113.13 Aligned_cols=284 Identities=6% Similarity=-0.150 Sum_probs=165.8
Q ss_pred CCCCeEEEEEccCCCeEE---EEeCCCc--EEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 8 KSARVKGLSFHPKRPWIL---SSLHNGV--IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 8 H~~~V~~l~fspdg~~La---sg~~dg~--I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
+.++...++..++++... .+..+|+ +.+||..+++.+.....+..+ .++|+||++.+++++.
T Consensus 18 ~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~----------- 84 (368)
T d1mdah_ 18 SDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALAST----------- 84 (368)
T ss_dssp CCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEE-----------
T ss_pred cCCCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeCCCCC--cceECCCCCEEEEEcc-----------
Confidence 445556667788887532 2344555 666699999988888766655 5899999998888751
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC-------CeEEEEEccCCCEEEEEe-CCCeEEEEECCCCe
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD-------YIRTTFFHHEYPWILSAS-DDQTIRIWYWQSRN 154 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~-------~V~~v~fsp~~~~l~sgs-~Dg~I~vWd~~~~~ 154 (641)
.....+.++.|++|++||..+++++..+..+.. ....++|+|||++++.++ .++.+.+||+.+++
T Consensus 85 -------~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~ 157 (368)
T d1mdah_ 85 -------SFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp -------EETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTE
T ss_pred -------cCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 000011223578899999999999888765432 234689999999887775 67999999999999
Q ss_pred eEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC------CCceeeecccCCCceeeeeeeeeeC
Q psy9327 155 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG------MGKLVLSMKSKHPIWKYCKPVKYCN 228 (641)
Q Consensus 155 ~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~------~~~~v~s~~~~~~v~~~~~~l~s~~ 228 (641)
....+..+..... +......++..+.||++.+|+............ ....... ....+.. .....
T Consensus 158 ~~~~~~~~~~~~~---~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g-----~~~~~ 228 (368)
T d1mdah_ 158 DDQLTKSASCFHI---HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQA-AQANYPG-----MLVWA 228 (368)
T ss_dssp EEEEEECSSCCCC---EEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCC-EEETTTT-----EEEEC
T ss_pred EeEEeeccCcceE---ccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceee-cccccCc-----EEEEe
Confidence 9888876554321 222345677778888888888765443322211 0000000 0000000 00001
Q ss_pred CCeeEEEecCCCcceee-----------ecC---CcceEEEEEcCCccEEEEec---------CCeEEEEEcCCCCe-Ee
Q psy9327 229 PKHTLHICNRKMEPLCN-----------IHE---NTRVKSGAWDESGVFIYTTS---------NHIKYAIVNGDHGI-IR 284 (641)
Q Consensus 229 ~d~~I~i~d~~~~~~~~-----------~~~---~~~I~sla~~p~g~~L~t~s---------~~~k~~l~~~~~g~-I~ 284 (641)
..+.+.+++........ ... ......+++++++..++... ...++.+|+..++. +.
T Consensus 229 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~ 308 (368)
T d1mdah_ 229 VASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSG 308 (368)
T ss_dssp BSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEE
T ss_pred cCCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeE
Confidence 12222222211111000 000 11123467888877776543 23467788877664 44
Q ss_pred ccccceE----EEEEcCc-EEE-EEeCCCCeEEEEeCCcchh
Q psy9327 285 TLDLPIY----ITKIKGN-QVY-YLDRECSPHVLRIDPTEFK 320 (641)
Q Consensus 285 ~~d~p~~----~~~~~g~-~v~-~~~~dg~i~v~~~~~~~~~ 320 (641)
.++..-. .+..+|+ .++ +...++.+.+|+..+++..
T Consensus 309 ~~~~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~ 350 (368)
T d1mdah_ 309 PISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQ 350 (368)
T ss_dssp CCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEE
T ss_pred EecCCCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEE
Confidence 4443211 2334665 344 4456789999998877654
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.10 E-value=1.9e-09 Score=114.60 Aligned_cols=110 Identities=9% Similarity=0.060 Sum_probs=88.4
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeC---------CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeE
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLH---------NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIV 74 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~---------dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~ 74 (641)
+|..|...|.+.+|||||++|+.++. ++.+.+||+.+++ +..+..|...+..+.|||||..++..
T Consensus 56 ~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~-~~~l~~~~~~~~~~~~SPDG~~ia~~----- 129 (470)
T d2bgra1 56 TFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ-LITEERIPNNTQWVTWSPVGHKLAYV----- 129 (470)
T ss_dssp TTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE-ECCSSCCCTTEEEEEECSSTTCEEEE-----
T ss_pred hhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCc-ccccccCCccccccccccCcceeeEe-----
Confidence 45677789999999999999998753 5788999999886 45677899999999999999999997
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc------------------CCCCeEEEEEccCCCEE
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG------------------HLDYIRTTFFHHEYPWI 136 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~------------------h~~~V~~v~fsp~~~~l 136 (641)
.++.+.+|+..+++....... +.+...++.|+|||+.|
T Consensus 130 ------------------------~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~i 185 (470)
T d2bgra1 130 ------------------------WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFL 185 (470)
T ss_dssp ------------------------ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEE
T ss_pred ------------------------ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCcc
Confidence 578899999998876554322 22335668899999999
Q ss_pred EEEeCCC
Q psy9327 137 LSASDDQ 143 (641)
Q Consensus 137 ~sgs~Dg 143 (641)
+....|.
T Consensus 186 a~~~~d~ 192 (470)
T d2bgra1 186 AYAQFND 192 (470)
T ss_dssp EEEEEEC
T ss_pred ceeEecC
Confidence 9876543
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=98.95 E-value=1.5e-08 Score=105.99 Aligned_cols=257 Identities=9% Similarity=-0.026 Sum_probs=157.1
Q ss_pred EEEEeCCCcEEEEECccCcccccccc------------------------------cccCeEEEEEeCCCCEEEEeceee
Q psy9327 24 ILSSLHNGVIQLWDYRMNTLLEKFDE------------------------------HEGPVRGICFHNQQPIFVSGGKMI 73 (641)
Q Consensus 24 Lasg~~dg~I~iWD~~~~~~l~~~~~------------------------------h~~~V~~i~fsp~~~~l~sgs~~~ 73 (641)
++||+++|+|++||+.+++.+.++.. |........++|||+++.+..
T Consensus 14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d--- 90 (441)
T d1qnia2 14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFIND--- 90 (441)
T ss_dssp EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEE---
T ss_pred EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEc---
Confidence 67888999999999988876655421 122233344467777776665
Q ss_pred EEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc-cCCCCeEEEEEccCCC--EEEEEeCCC-------
Q psy9327 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL-GHLDYIRTTFFHHEYP--WILSASDDQ------- 143 (641)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~-~h~~~V~~v~fsp~~~--~l~sgs~Dg------- 143 (641)
..+.+|.++|+.+++....+. .+...+.+++|+|+++ +++..+.+.
T Consensus 91 ------------------------~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg 146 (441)
T d1qnia2 91 ------------------------KANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDG 146 (441)
T ss_dssp ------------------------TTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSS
T ss_pred ------------------------CCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcc
Confidence 378999999999999888765 3567899999999988 555554432
Q ss_pred ----------eEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCC-eEEEEecCCCceeeeccCCCc-eeeec
Q psy9327 144 ----------TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQ-TIRVWDISGLRKKNVAPGMGK-LVLSM 211 (641)
Q Consensus 144 ----------~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~Dg-tI~IWD~~~~~~~~~~~~~~~-~v~s~ 211 (641)
.+..+|..+.+...+.... .....+.|+|+|.++++++.+. .+..+|..+.+........+. ....+
T Consensus 147 ~~~~~~~~~~~~~~iD~~t~~v~~qI~v~-~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~ 225 (441)
T d1qnia2 147 TDFSLDNSYTMFTAIDAETMDVAWQVIVD-GNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAA 225 (441)
T ss_dssp SCCCGGGEEEEEEEEETTTCSEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHH
T ss_pred cccccccccceEEeecCccceeeEEEecC-CCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEE
Confidence 2456888888777666533 4577899999999999888653 333334433332222110000 00000
Q ss_pred ccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEe-cCCeEEEEEcCCC------CeE
Q psy9327 212 KSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTT-SNHIKYAIVNGDH------GII 283 (641)
Q Consensus 212 ~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~-s~~~k~~l~~~~~------g~I 283 (641)
..... ......++.+.+++ .....+..+..+.....+.++|||++++.+ ..+..+.+|+.+. +.+
T Consensus 226 ~~dGk-------~~~v~~~~v~vvd~~~~~~v~~~IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~ 298 (441)
T d1qnia2 226 VKAGN-------FKTIGDSKVPVVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKI 298 (441)
T ss_dssp HHTTC-------CBCCTTCCCCEEECSSSCSSEEEECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSS
T ss_pred ecCCC-------EEEeCCCCcEEEEcccCCceEEEEeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccC
Confidence 00000 12223456667776 334566677777777889999999988765 4566666665322 000
Q ss_pred e-------cccc---ceEEE-EEcCcEEEEEeCCCCeEEEEeC
Q psy9327 284 R-------TLDL---PIYIT-KIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 284 ~-------~~d~---p~~~~-~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
. ..+. |+... ..+|....++.-|..+..|+++
T Consensus 299 ~~~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~ 341 (441)
T d1qnia2 299 ELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIA 341 (441)
T ss_dssp CGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred CcceEEEeecccccCcccceecCCceEEEcccccceEEEeccc
Confidence 0 0000 12212 2234555566788888888885
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.78 E-value=4.8e-07 Score=88.00 Aligned_cols=155 Identities=6% Similarity=0.026 Sum_probs=104.9
Q ss_pred CeEEEEEccCCCeEEEE-eCCCcEEEEECccCc-ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 11 RVKGLSFHPKRPWILSS-LHNGVIQLWDYRMNT-LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg-~~dg~I~iWD~~~~~-~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
.-.+++++++|++.++. +.++.+..++..... ....+.+. ....++++++++.++++..
T Consensus 15 ~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~p~gvav~~~g~i~v~d~------------------ 75 (260)
T d1rwia_ 15 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGL-YQPQGLAVDGAGTVYVTDF------------------ 75 (260)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSC-CSCCCEEECTTCCEEEEET------------------
T ss_pred CCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCc-cCceEEEEcCCCCEEEeee------------------
Confidence 35899999999966554 456777777654332 22222222 3447899999999877765
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEE
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMC 168 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~s 168 (641)
..+.+++++-.++..+.... ......++++.++++++++-..+..+..++............-......
T Consensus 76 ----------~~~~i~~~~~~~~~~~~~~~-~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 144 (260)
T d1rwia_ 76 ----------NNRVVTLAAGSNNQTVLPFD-GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDG 144 (260)
T ss_dssp ----------TTEEEEECTTCSCCEECCCC-SCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCE
T ss_pred ----------eeceeeeeeeccceeeeeee-eeeecccccccccceeEeeccccccccccccccceeeeeeecccCCcce
Confidence 67777777655555443333 2356789999999998888777778888887654432222223345678
Q ss_pred EEEecCCCEEEEEeCCCeEEEEecCCC
Q psy9327 169 AQFHPTDDIVVSASLDQTIRVWDISGL 195 (641)
Q Consensus 169 l~fsp~g~~lvSgs~DgtI~IWD~~~~ 195 (641)
++++|+++.+++...++.|..+|..+.
T Consensus 145 i~~~~~g~~~v~~~~~~~i~~~d~~~~ 171 (260)
T d1rwia_ 145 VAVDNSGNVYVTDTDNNRVVKLEAESN 171 (260)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred eeecCCCCEeeeccccccccccccccc
Confidence 999999998888888889999987753
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.71 E-value=1.5e-05 Score=77.84 Aligned_cols=233 Identities=13% Similarity=0.167 Sum_probs=152.6
Q ss_pred CeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccc------cccCeEEEEEeCCC-CEEEEeceeeEEeeeceeee
Q psy9327 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDE------HEGPVRGICFHNQQ-PIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~------h~~~V~~i~fsp~~-~~l~sgs~~~~~~~~~~~~~ 83 (641)
.-..++++|+|+++++-..++.|++||.+ |+.+..+.. ....-..+++.++. ..+++..
T Consensus 24 ~P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~------------- 89 (279)
T d1q7fa_ 24 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTER------------- 89 (279)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEEC-------------
T ss_pred CccEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceecc-------------
Confidence 47899999999988887788999999954 666665532 11234556666553 3444433
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc-cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE--c
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL-GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL--T 160 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~-~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l--~ 160 (641)
+.++.|.+++. .++....+. .......++++.+++.++++....+.+.+++. +++.+.++ .
T Consensus 90 --------------~~~~~i~~~~~-~g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~-~g~~~~~~g~~ 153 (279)
T d1q7fa_ 90 --------------SPTHQIQIYNQ-YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCS 153 (279)
T ss_dssp --------------GGGCEEEEECT-TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECT
T ss_pred --------------CCccccccccc-cccceeecCCCcccccceeccccCCcEEEEeeccceeeEecc-CCceeeccccc
Confidence 26678888885 466666664 34567789999999998888888888999885 45666665 3
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCC
Q psy9327 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKM 240 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~ 240 (641)
.+......+++.+++..+++....+.|++||.... ....+.. . +
T Consensus 154 ~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~G~-~~~~~g~--------------------------~---------g 197 (279)
T d1q7fa_ 154 KHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ-YLRQIGG--------------------------E---------G 197 (279)
T ss_dssp TTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC-EEEEESC--------------------------T---------T
T ss_pred ccccccceeeeccceeEEeeeccccceeeeecCCc-eeeeecc--------------------------c---------c
Confidence 56677889999999999888888999999987542 2221110 0 0
Q ss_pred cceeeecCCcceEEEEEcCCccEEEEec-CCeEEEEEcCCCCeEecccc------ceEEEEEcCcEEEEEeCCCCeEEEE
Q psy9327 241 EPLCNIHENTRVKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIRTLDL------PIYITKIKGNQVYYLDRECSPHVLR 313 (641)
Q Consensus 241 ~~~~~~~~~~~I~sla~~p~g~~L~t~s-~~~k~~l~~~~~g~I~~~d~------p~~~~~~~g~~v~~~~~dg~i~v~~ 313 (641)
.......++++++|..+++-+ ++.++.+++.+...++.+.. |..+.-..+..++..+.+.+|++|+
T Consensus 198 -------~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~G~~~~~~~~~~~~~~p~~vav~~dG~l~V~~~n~~v~~fr 270 (279)
T d1q7fa_ 198 -------ITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYR 270 (279)
T ss_dssp -------TSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEE
T ss_pred -------cccCCcccccccCCeEEEEECCCCcEEEEECCCCCEEEEEeCCCCCCCEeEEEEeCCCcEEEEeCCCeEEEEE
Confidence 112345577888877555433 44567777654434444422 3222223344566677888888887
Q ss_pred eCC
Q psy9327 314 IDP 316 (641)
Q Consensus 314 ~~~ 316 (641)
...
T Consensus 271 ~~~ 273 (279)
T d1q7fa_ 271 YVQ 273 (279)
T ss_dssp CSC
T ss_pred eee
Confidence 664
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.64 E-value=7.7e-06 Score=80.98 Aligned_cols=201 Identities=13% Similarity=0.053 Sum_probs=133.5
Q ss_pred CeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
.+.+++++|||+++++...+++|..||-. ++ ...+....+.+.+++|+|+|.++++..
T Consensus 29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~-g~-~~~~~~~~~~~~gla~~~dG~l~v~~~-------------------- 86 (302)
T d2p4oa1 29 FLENLASAPDGTIFVTNHEVGEIVSITPD-GN-QQIHATVEGKVSGLAFTSNGDLVATGW-------------------- 86 (302)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-CC-EEEEEECSSEEEEEEECTTSCEEEEEE--------------------
T ss_pred CcCCEEECCCCCEEEEeCCCCEEEEEeCC-CC-EEEEEcCCCCcceEEEcCCCCeEEEec--------------------
Confidence 58899999999999999999999888844 43 334556678899999999999888876
Q ss_pred eeeEEEeeCCCeEEEEECCCC--eeEEEE-ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc-------
Q psy9327 91 FRIKSVLGDDYKIKVWNYKQR--KCIFTL-LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT------- 160 (641)
Q Consensus 91 ~~~~~~~s~Dg~I~vWD~~t~--~~~~~~-~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~------- 160 (641)
.++.+..|+.... ...... .........+++.+++.++++.+.++.+..+|...+.....+.
T Consensus 87 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 158 (302)
T d2p4oa1 87 --------NADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARS 158 (302)
T ss_dssp --------CTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCS
T ss_pred --------CCceEEEEEecccccceeeccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCcccee
Confidence 6777777776432 222211 2245668899999999999999999999999988775433221
Q ss_pred ---cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 161 ---GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 161 ---~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
........+.+.. +.++++.+..+.|..++...........
T Consensus 159 ~~~~~~~~~ngi~~~~-~~l~~~~~~~~~i~~~~~~~~~~~~~~~----------------------------------- 202 (302)
T d2p4oa1 159 NSESVFPAANGLKRFG-NFLYVSNTEKMLLLRIPVDSTDKPGEPE----------------------------------- 202 (302)
T ss_dssp STTCCSCSEEEEEEET-TEEEEEETTTTEEEEEEBCTTSCBCCCE-----------------------------------
T ss_pred eccCcccccccccccC-CceeeecCCCCeEEeccccccccccccc-----------------------------------
Confidence 1122345566653 3456666777888877775532111000
Q ss_pred CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe
Q psy9327 238 RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR 284 (641)
Q Consensus 238 ~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~ 284 (641)
..........++++++|.+.++...++++..+..+.+...
T Consensus 203 -------~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~~~ 242 (302)
T d2p4oa1 203 -------IFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTI 242 (302)
T ss_dssp -------EEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEE
T ss_pred -------cccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCCCEEE
Confidence 0001122334888888876666666777777766554433
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=98.60 E-value=3.3e-07 Score=95.61 Aligned_cols=225 Identities=7% Similarity=-0.027 Sum_probs=141.1
Q ss_pred cCCCCeEEEEEccCCCeEEEEe-CCCcEEEEECccCccccccc-ccccCeEEEEEeCCCC--EEEEeceeeEEe-eecee
Q psy9327 7 TKSARVKGLSFHPKRPWILSSL-HNGVIQLWDYRMNTLLEKFD-EHEGPVRGICFHNQQP--IFVSGGKMIVMA-YQGCI 81 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~-~dg~I~iWD~~~~~~l~~~~-~h~~~V~~i~fsp~~~--~l~sgs~~~~~~-~~~~~ 81 (641)
.|.-......++|||++|++.. .+++|.++|+++++....++ .+.....+++|+|+++ +++..++..... .++..
T Consensus 69 ~hhP~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~ 148 (441)
T d1qnia2 69 CHHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTD 148 (441)
T ss_dssp BCCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSC
T ss_pred ccCCCcceecccCCCCEEEEEcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccc
Confidence 3445566666789999986665 68899999999998766554 3567899999999988 444443110000 00000
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC-------------------
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD------------------- 142 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D------------------- 142 (641)
. ... .....+..+|..+.+...++... +....++|+|+|+++++++.+
T Consensus 149 ~-----~~~-------~~~~~~~~iD~~t~~v~~qI~v~-~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~ 215 (441)
T d1qnia2 149 F-----SLD-------NSYTMFTAIDAETMDVAWQVIVD-GNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVV 215 (441)
T ss_dssp C-----CGG-------GEEEEEEEEETTTCSEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEE
T ss_pred c-----ccc-------cccceEEeecCccceeeEEEecC-CCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEE
Confidence 0 000 01134677899888887777643 456789999999998877643
Q ss_pred ----------------------CeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEE-EEEeCCCeEEEEecCCCceee
Q psy9327 143 ----------------------QTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIV-VSASLDQTIRVWDISGLRKKN 199 (641)
Q Consensus 143 ----------------------g~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~l-vSgs~DgtI~IWD~~~~~~~~ 199 (641)
+.+.+++......+..+..+.. ...+.++|||+++ +++..|++|.+||+.+...
T Consensus 216 v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~~IPvgks-PhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~-- 292 (441)
T d1qnia2 216 VFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVPKN-PHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDD-- 292 (441)
T ss_dssp EEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCSSEEEECCBSS-CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHH--
T ss_pred eCCccceEEEecCCCEEEeCCCCcEEEEcccCCceEEEEeCCCC-ccCceECCCCCEEEEeCCcCCcEEEEEeehhhh--
Confidence 3345555555555666655443 4678999999976 5677899999999976332
Q ss_pred eccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcC
Q psy9327 200 VAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 200 ~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~ 278 (641)
.+.+.-.+..+ .......+......+|+++|....+..-+..+..|+.
T Consensus 293 ~~~~~~~~~~~-------------------------------~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~ 340 (441)
T d1qnia2 293 LFEDKIELRDT-------------------------------IVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNI 340 (441)
T ss_dssp HTTTSSCGGGG-------------------------------EEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEH
T ss_pred HhhccCCcceE-------------------------------EEeecccccCcccceecCCceEEEcccccceEEEecc
Confidence 11111011000 0000011223344689999987777777888888874
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=98.57 E-value=2.7e-06 Score=87.00 Aligned_cols=267 Identities=11% Similarity=0.020 Sum_probs=139.7
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccc--cccCeEEEEEeCCCCE--EEEeceeeEEeeeceeeec
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDE--HEGPVRGICFHNQQPI--FVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~--h~~~V~~i~fsp~~~~--l~sgs~~~~~~~~~~~~~~ 84 (641)
...+..|+|+|+++.|.++.. +.+..|.+.....+..... .......++++++++. ++++... .+.
T Consensus 39 ~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~-----~~~---- 108 (365)
T d1jofa_ 39 DEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQP-----PYA---- 108 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSST-----TCC----
T ss_pred CCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecCC-----CCE----
Confidence 344667999999998888764 5688887764322222211 2233456778888874 3333200 000
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCC-Cee---EEEE-ccCCCCeEEEEEccCCCEEEEEeC-CCeEEEEECCCCee---
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQ-RKC---IFTL-LGHLDYIRTTFFHHEYPWILSASD-DQTIRIWYWQSRNC--- 155 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t-~~~---~~~~-~~h~~~V~~v~fsp~~~~l~sgs~-Dg~I~vWd~~~~~~--- 155 (641)
.........++...+..+.. ++. .... ......+.++.|+|+|+++++++. ...|.+|+......
T Consensus 109 ------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~ 182 (365)
T d1jofa_ 109 ------VYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVEL 182 (365)
T ss_dssp ------EEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEE
T ss_pred ------EEEeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceee
Confidence 00000001122223333221 111 1111 112234789999999998877764 45788887654322
Q ss_pred EEEE--ccCCCCEEEEEEecCCCEEEE-EeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCee
Q psy9327 156 ICVL--TGHNHYVMCAQFHPTDDIVVS-ASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHT 232 (641)
Q Consensus 156 i~~l--~~h~~~V~sl~fsp~g~~lvS-gs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~ 232 (641)
.... .......+.+.|+|+++++.+ ...+++|.+||+...+........ .
T Consensus 183 ~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~---------------------------~ 235 (365)
T d1jofa_ 183 VGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHH---------------------------S 235 (365)
T ss_dssp EEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE---------------------------E
T ss_pred ccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEee---------------------------e
Confidence 1222 233567899999999997755 446889999999765432221100 0
Q ss_pred EEEecC--CCcceeeecCCcceEEEEEcCCccEEEEecC------CeEEEEEc-CCCCeEecc----------ccceEE-
Q psy9327 233 LHICNR--KMEPLCNIHENTRVKSGAWDESGVFIYTTSN------HIKYAIVN-GDHGIIRTL----------DLPIYI- 292 (641)
Q Consensus 233 I~i~d~--~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~------~~k~~l~~-~~~g~I~~~----------d~p~~~- 292 (641)
+.++.. ................+.++|+|++|+++.. .+.+..+. ..++.+... ..|..+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~ 315 (365)
T d1jofa_ 236 FPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVS 315 (365)
T ss_dssp EESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEE
T ss_pred eccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEE
Confidence 000000 0000001112334556889999999998741 22344443 333433211 123222
Q ss_pred EEE-cCcEEEEEe-CCCCeEEEEeCCcc
Q psy9327 293 TKI-KGNQVYYLD-RECSPHVLRIDPTE 318 (641)
Q Consensus 293 ~~~-~g~~v~~~~-~dg~i~v~~~~~~~ 318 (641)
... +|..++..+ .++.+.+|+++...
T Consensus 316 ~~p~~G~~l~va~~~s~~v~v~~~~~~~ 343 (365)
T d1jofa_ 316 PCPWSDEWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp ECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred ecCCCCCEEEEEeCCCCeEEEEEEeCCc
Confidence 222 567676664 66889999887653
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.54 E-value=1.4e-05 Score=79.96 Aligned_cols=217 Identities=11% Similarity=0.035 Sum_probs=137.8
Q ss_pred CeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
.+.+++|+++|++.++-..+|.|.-||...++....+........+++|+++|.++++....
T Consensus 41 ~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~------------------ 102 (319)
T d2dg1a1 41 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGD------------------ 102 (319)
T ss_dssp CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTT------------------
T ss_pred CcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCC------------------
Confidence 45789999999977777789999999987776555555566778999999999988775300
Q ss_pred eeeEEEeeCCCeEEEEECCCCeeEEEEccC--CCCeEEEEEccCCCEEEEEeC------CCeEEEEECCCCeeEEEEccC
Q psy9327 91 FRIKSVLGDDYKIKVWNYKQRKCIFTLLGH--LDYIRTTFFHHEYPWILSASD------DQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 91 ~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h--~~~V~~v~fsp~~~~l~sgs~------Dg~I~vWd~~~~~~i~~l~~h 162 (641)
....+.+...+..++......... ......+++.++|.+.++... .+.+..++...+. +..+...
T Consensus 103 ------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~-~~~~~~~ 175 (319)
T d2dg1a1 103 ------FKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT-VTPIIQN 175 (319)
T ss_dssp ------SSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC-EEEEEEE
T ss_pred ------CccceeEEEEcCCCceeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccce-eEEEeec
Confidence 002344566666655544444321 234778999999997776533 2346556554333 3333333
Q ss_pred CCCEEEEEEecCCCEE-EEEeCCCeEEEEecCCCce-eeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCC
Q psy9327 163 NHYVMCAQFHPTDDIV-VSASLDQTIRVWDISGLRK-KNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKM 240 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~l-vSgs~DgtI~IWD~~~~~~-~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~ 240 (641)
....+.++|+|+++.| ++-+..+.|..||+..... ..... ..
T Consensus 176 ~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~----------------------------~~-------- 219 (319)
T d2dg1a1 176 ISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFG----------------------------AT-------- 219 (319)
T ss_dssp ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEE----------------------------EE--------
T ss_pred cceeeeeeeccccceEEEecccCCceEEEEEcCCCceecccc----------------------------ce--------
Confidence 3456789999999865 5556688999998764211 00000 00
Q ss_pred cceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEeccccc
Q psy9327 241 EPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLP 289 (641)
Q Consensus 241 ~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~p 289 (641)
...........-.+++|++|...++....+++..++.+...+..+.+|
T Consensus 220 -~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p~G~~l~~i~~P 267 (319)
T d2dg1a1 220 -IPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIP 267 (319)
T ss_dssp -EEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEECT
T ss_pred -eeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECCCCcEEEEEeCC
Confidence 000001112234588999998666667788899998766667777665
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.53 E-value=3.1e-06 Score=82.09 Aligned_cols=155 Identities=10% Similarity=0.068 Sum_probs=110.9
Q ss_pred CeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
...+++++++|.++++...++.+++++-.++..+..... .....++++.+++.++++-.
T Consensus 58 ~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~~~~~-~~~p~~iavd~~g~i~v~d~-------------------- 116 (260)
T d1rwia_ 58 QPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDG-LNYPEGLAVDTQGAVYVADR-------------------- 116 (260)
T ss_dssp SCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCCS-CCSEEEEEECTTCCEEEEEG--------------------
T ss_pred CceEEEEcCCCCEEEeeeeeceeeeeeeccceeeeeeee-eeecccccccccceeEeecc--------------------
Confidence 456889999999887777777777776555544443332 34568999999998877664
Q ss_pred eeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEE
Q psy9327 91 FRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQ 170 (641)
Q Consensus 91 ~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~ 170 (641)
.+..+..++............-.....++++.+++..+++...++.|..+|...................++
T Consensus 117 --------~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~ 188 (260)
T d1rwia_ 117 --------GNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIA 188 (260)
T ss_dssp --------GGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEE
T ss_pred --------ccccccccccccceeeeeeecccCCcceeeecCCCCEeeeccccccccccccccceeeeeeccccCCCccce
Confidence 666777777654432222222234567899999999888888889999999876544333335566788999
Q ss_pred EecCCCEEEEEeCCCeEEEEecCC
Q psy9327 171 FHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 171 fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
+.++|.++++....+.|..++..+
T Consensus 189 ~d~~g~l~vsd~~~~~i~~~~~~~ 212 (260)
T d1rwia_ 189 VDEAGTVYVTEHNTNQVVKLLAGS 212 (260)
T ss_dssp ECTTCCEEEEETTTTEEEEECTTC
T ss_pred eeeeeeeeeeecCCCEEEEEeCCC
Confidence 999999988888888888777654
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.45 E-value=6e-05 Score=74.96 Aligned_cols=224 Identities=11% Similarity=0.063 Sum_probs=132.6
Q ss_pred CCCCeEEEEEccCCCeEEEEeC-------CCcEEEEECccCcccccccc----cccCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 8 KSARVKGLSFHPKRPWILSSLH-------NGVIQLWDYRMNTLLEKFDE----HEGPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~-------dg~I~iWD~~~~~~l~~~~~----h~~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
.-....+++|+|+|++.++... +|+|..||..+++....... ..+.-.+++|.+++..+++++
T Consensus 16 ~~~g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad------ 89 (314)
T d1pjxa_ 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD------ 89 (314)
T ss_dssp CCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE------
T ss_pred CCCCCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEE------
Confidence 3345678899999997776433 46788999877754322211 223467899999998777776
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC----CeEEEEEccCCCEEEEEeC-----------
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD----YIRTTFFHHEYPWILSASD----------- 141 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~----~V~~v~fsp~~~~l~sgs~----------- 141 (641)
....|...|...+..........+ ....+++.++|.+.++-..
T Consensus 90 ----------------------~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~ 147 (314)
T d1pjxa_ 90 ----------------------MRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRS 147 (314)
T ss_dssp ----------------------TTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBT
T ss_pred ----------------------CCCeEEEEeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccce
Confidence 556788888775543221111121 3578999999998877432
Q ss_pred ----CCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCC-----EEEEEeCCCeEEEEecCCCceee------eccCCCc
Q psy9327 142 ----DQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD-----IVVSASLDQTIRVWDISGLRKKN------VAPGMGK 206 (641)
Q Consensus 142 ----Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~-----~lvSgs~DgtI~IWD~~~~~~~~------~~~~~~~ 206 (641)
++.|..++.. ++.. .+..+....+.++|+|+++ +.++-+..+.|..||+....... .+++...
T Consensus 148 ~~~~~G~v~~~~~d-g~~~-~~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~ 225 (314)
T d1pjxa_ 148 MQEKFGSIYCFTTD-GQMI-QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHE 225 (314)
T ss_dssp TSSSCEEEEEECTT-SCEE-EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSS
T ss_pred eccCCceEEEEeec-Ccee-EeeCCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEcccccc
Confidence 2345555533 3322 2223344567899999865 55566778899999875432221 1111100
Q ss_pred -e--eeecccCCCceeeeeeeeeeCCCeeEEEecCC-CcceeeecC-CcceEEEEEcCCccEEEEe
Q psy9327 207 -L--VLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK-MEPLCNIHE-NTRVKSGAWDESGVFIYTT 267 (641)
Q Consensus 207 -~--v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~-~~~~~~~~~-~~~I~sla~~p~g~~L~t~ 267 (641)
. =+++.....+| .+....+.|.++|.. ......+.. ....++++|.|++..|+.+
T Consensus 226 ~~pdGiavD~~Gnly------Va~~~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt 285 (314)
T d1pjxa_ 226 GGADGMDFDEDNNLL------VANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVT 285 (314)
T ss_dssp CEEEEEEEBTTCCEE------EEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred ccceeeEEecCCcEE------EEEcCCCEEEEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEE
Confidence 0 01112222222 122356778888844 444455544 4678899999998766554
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=98.43 E-value=3.3e-06 Score=86.38 Aligned_cols=158 Identities=10% Similarity=0.099 Sum_probs=104.6
Q ss_pred CeEEEEEccCCCeEEEEeC-CCcEEEEECccCcccc---ccc--ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 11 RVKGLSFHPKRPWILSSLH-NGVIQLWDYRMNTLLE---KFD--EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~-dg~I~iWD~~~~~~l~---~~~--~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
.+.++.|+|||+++++++. ...|.+|+......+. ... ......+.++|+|+++++.+...
T Consensus 146 h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e------------- 212 (365)
T d1jofa_ 146 GIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME------------- 212 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET-------------
T ss_pred cceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEecc-------------
Confidence 4789999999998887764 4578888765322211 111 23456789999999998877662
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeE--EE---Ec--------------cCCCCeEEEEEccCCCEEEEEeC----
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCI--FT---LL--------------GHLDYIRTTFFHHEYPWILSASD---- 141 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~--~~---~~--------------~h~~~V~~v~fsp~~~~l~sgs~---- 141 (641)
.+++|.+||+..++.. .. .. .+......+.++|+|++++++..
T Consensus 213 --------------~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~ 278 (365)
T d1jofa_ 213 --------------AGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKF 278 (365)
T ss_dssp --------------TTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESST
T ss_pred --------------CCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCC
Confidence 7899999998765422 11 11 11223567899999998877642
Q ss_pred --CCeEEEEECCCCeeEEE------EccCCCCEEEEEEec-CCCEEEEE-eCCCeEEEEecCCC
Q psy9327 142 --DQTIRIWYWQSRNCICV------LTGHNHYVMCAQFHP-TDDIVVSA-SLDQTIRVWDISGL 195 (641)
Q Consensus 142 --Dg~I~vWd~~~~~~i~~------l~~h~~~V~sl~fsp-~g~~lvSg-s~DgtI~IWD~~~~ 195 (641)
.+.|..|+......+.. ........+.++|+| +|++|+++ ..+++|.+|+++..
T Consensus 279 ~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~ 342 (365)
T d1jofa_ 279 ELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred ccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence 22377777654322211 112334567799998 78877666 56799999988653
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.39 E-value=1.9e-05 Score=77.17 Aligned_cols=156 Identities=18% Similarity=0.271 Sum_probs=119.1
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccc--cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeeccc
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF--DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRN 86 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~--~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~ 86 (641)
.....++++.++|.++++....+.+.+++. .++.+.++ ..+......+++.+++..+++..
T Consensus 113 ~~~p~~~avd~~G~i~v~~~~~~~~~~~~~-~g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~---------------- 175 (279)
T d1q7fa_ 113 LQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDN---------------- 175 (279)
T ss_dssp CSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEG----------------
T ss_pred ccccceeccccCCcEEEEeeccceeeEecc-CCceeecccccccccccceeeeccceeEEeeec----------------
Confidence 455678999999998888777788888884 46666665 34566788899999998877776
Q ss_pred CCcceeeEEEeeCCCeEEEEECCCCeeEEEEc--cCCCCeEEEEEccCCCEEEEEeC-CCeEEEEECCCCeeEEEEcc--
Q psy9327 87 EPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL--GHLDYIRTTFFHHEYPWILSASD-DQTIRIWYWQSRNCICVLTG-- 161 (641)
Q Consensus 87 ~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~--~h~~~V~~v~fsp~~~~l~sgs~-Dg~I~vWd~~~~~~i~~l~~-- 161 (641)
..+.|++||.. |+.+.++. ++.....++++.++|+++++-+. ++.|.+++ .+++.+.++..
T Consensus 176 ------------~~~~V~~~d~~-G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~-~~G~~~~~~~~~~ 241 (279)
T d1q7fa_ 176 ------------RAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT-QDGQLISALESKV 241 (279)
T ss_dssp ------------GGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC-TTSCEEEEEEESS
T ss_pred ------------cccceeeeecC-CceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEEC-CCCCEEEEEeCCC
Confidence 78899999964 67777773 35567889999999997777554 45799998 56777766643
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCc
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~ 196 (641)
.......+++.|+|.+++ ++.+.+|++|..+...
T Consensus 242 ~~~~p~~vav~~dG~l~V-~~~n~~v~~fr~~~~~ 275 (279)
T d1q7fa_ 242 KHAQCFDVALMDDGSVVL-ASKDYRLYIYRYVQLA 275 (279)
T ss_dssp CCSCEEEEEEETTTEEEE-EETTTEEEEEECSCCC
T ss_pred CCCCEeEEEEeCCCcEEE-EeCCCeEEEEEeeeec
Confidence 334688999999997555 5679999999988753
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.38 E-value=0.00014 Score=69.28 Aligned_cols=156 Identities=6% Similarity=-0.024 Sum_probs=96.8
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCC-C--cEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHN-G--VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~d-g--~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+..+...+.+-+|||||+.||-.... + .+.+.+...+. ...+..+.+......|+|++..++....
T Consensus 34 l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~spdg~~i~~~~~---------- 102 (269)
T d2hqsa1 34 VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA-VRQVASFPRHNGAPAFSPDGSKLAFALS---------- 102 (269)
T ss_dssp EEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-EEEEECCSSCEEEEEECTTSSEEEEEEC----------
T ss_pred EecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCc-eeEEeeeecccccceecCCCCeeeEeee----------
Confidence 34456778899999999999866543 3 35555655443 3445567788899999999998887651
Q ss_pred eecccCCcceeeEEEeeCCCe--EEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEE-eCCC--eEEEEECCCCeeE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYK--IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSA-SDDQ--TIRIWYWQSRNCI 156 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~--I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sg-s~Dg--~I~vWd~~~~~~i 156 (641)
.++. +..+...... ......+........+++++..++.. ..++ .|...+...+..
T Consensus 103 -----------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~- 163 (269)
T d2hqsa1 103 -----------------KTGSLNLYVMDLASGQ-IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP- 163 (269)
T ss_dssp -----------------TTSSCEEEEEETTTCC-EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-
T ss_pred -----------------cCCccceeeccccccc-ceeeeeccccccccccccccccceecccccCCceEeeeecccccc-
Confidence 3333 3333333333 22333344455556677777655444 4444 456666665543
Q ss_pred EEEccCCCCEEEEEEecCCCEEEEEeCCC-eEEEE
Q psy9327 157 CVLTGHNHYVMCAQFHPTDDIVVSASLDQ-TIRVW 190 (641)
Q Consensus 157 ~~l~~h~~~V~sl~fsp~g~~lvSgs~Dg-tI~IW 190 (641)
..+..+........|+|++..++..+.++ ...+|
T Consensus 164 ~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~ 198 (269)
T d2hqsa1 164 QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIA 198 (269)
T ss_dssp EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEE
T ss_pred eeeecccccccccccccccceeEEEeecCCceeee
Confidence 33445667778889999999887765543 44444
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.23 E-value=9.7e-05 Score=72.69 Aligned_cols=114 Identities=9% Similarity=0.008 Sum_probs=88.7
Q ss_pred CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccC
Q psy9327 53 PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE 132 (641)
Q Consensus 53 ~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~ 132 (641)
.+.+++++|||+++++.. .+++|..||.... ...+....+.+.+++|+++
T Consensus 29 ~~e~iAv~pdG~l~vt~~----------------------------~~~~I~~i~p~g~--~~~~~~~~~~~~gla~~~d 78 (302)
T d2p4oa1 29 FLENLASAPDGTIFVTNH----------------------------EVGEIVSITPDGN--QQIHATVEGKVSGLAFTSN 78 (302)
T ss_dssp CEEEEEECTTSCEEEEET----------------------------TTTEEEEECTTCC--EEEEEECSSEEEEEEECTT
T ss_pred CcCCEEECCCCCEEEEeC----------------------------CCCEEEEEeCCCC--EEEEEcCCCCcceEEEcCC
Confidence 578999999999988886 8999999986543 3344456678999999999
Q ss_pred CCEEEEEeCCCeEEEEECCCCe-eEEEE--ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCc
Q psy9327 133 YPWILSASDDQTIRIWYWQSRN-CICVL--TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196 (641)
Q Consensus 133 ~~~l~sgs~Dg~I~vWd~~~~~-~i~~l--~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~ 196 (641)
++++++...++.+..|+..... ....+ .........+.+.+++.++++.+.++.+..+|..++.
T Consensus 79 G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~ 145 (302)
T d2p4oa1 79 GDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPS 145 (302)
T ss_dssp SCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTE
T ss_pred CCeEEEecCCceEEEEEecccccceeeccccCCccccceeEEccCCCEEeeccccccceeeeccCCc
Confidence 9999999888888888765432 11222 2345668899999999999998889999888887654
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.02 E-value=0.00045 Score=68.35 Aligned_cols=183 Identities=9% Similarity=0.054 Sum_probs=117.9
Q ss_pred eEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccc----cCeEEEEEeCCCCEEEEece----------------
Q psy9327 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHE----GPVRGICFHNQQPIFVSGGK---------------- 71 (641)
Q Consensus 12 V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~----~~V~~i~fsp~~~~l~sgs~---------------- 71 (641)
-.+++|+++++.++++...+.|...|...+.......... ...+.++|.++|.+.++-..
T Consensus 73 P~Gl~~~~dg~~l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~ 152 (314)
T d1pjxa_ 73 PAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKF 152 (314)
T ss_dssp EEEEEECSSSSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSC
T ss_pred ceeEEEeCCCCEEEEEECCCeEEEEeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCC
Confidence 4679999999988888777778888876543221111111 13577999999988777421
Q ss_pred eeEEee--eceeee---cccCCcc-----------eeeEEEeeCCCeEEEEECCCC-ee-----EEEEcc-CCCCeEEEE
Q psy9327 72 MIVMAY--QGCILE---SRNEPCL-----------FRIKSVLGDDYKIKVWNYKQR-KC-----IFTLLG-HLDYIRTTF 128 (641)
Q Consensus 72 ~~~~~~--~~~~~~---~~~~~~~-----------~~~~~~~s~Dg~I~vWD~~t~-~~-----~~~~~~-h~~~V~~v~ 128 (641)
..++.+ +|.... ....|+. ..+.++-+..+.|..||+... .. ...+.+ +.+....++
T Consensus 153 G~v~~~~~dg~~~~~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGia 232 (314)
T d1pjxa_ 153 GSIYCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMD 232 (314)
T ss_dssp EEEEEECTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEE
T ss_pred ceEEEEeecCceeEeeCCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeE
Confidence 011111 121111 1112221 123444566677777776532 22 112222 233467899
Q ss_pred EccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCC-EEEEEeCCCeEEEEecCC
Q psy9327 129 FHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISG 194 (641)
Q Consensus 129 fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~ 194 (641)
+.++|++.++....+.|.+||.+.++.+..+..+...+++++|.|+++ ++++.+.+++|...|+..
T Consensus 233 vD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~ 299 (314)
T d1pjxa_ 233 FDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EecCCcEEEEEcCCCEEEEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCC
Confidence 999999888888899999999988877777766667889999999986 556777789888888753
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.96 E-value=0.00023 Score=74.73 Aligned_cols=162 Identities=10% Similarity=0.057 Sum_probs=104.9
Q ss_pred CeEEEEEccCCCeEEEEe---------CCCcEEEEECccCcc--cccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 11 RVKGLSFHPKRPWILSSL---------HNGVIQLWDYRMNTL--LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~---------~dg~I~iWD~~~~~~--l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
.+....||||+++++.+. ..+.+.++|+.+++. +.......+.+....|||||..+|-.
T Consensus 62 ~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv---------- 131 (465)
T d1xfda1 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFI---------- 131 (465)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEE----------
T ss_pred ccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEE----------
Confidence 566788999999988764 357889999988764 32233345566678999999999887
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc-cCCCC-----------------eEEEEEccCCCEEEEEeC
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL-GHLDY-----------------IRTTFFHHEYPWILSASD 141 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~-~h~~~-----------------V~~v~fsp~~~~l~sgs~ 141 (641)
.++.|.+.+..++..++... +..+. -.++.|||||+.||....
T Consensus 132 -------------------~~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~ 192 (465)
T d1xfda1 132 -------------------FENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAI 192 (465)
T ss_dssp -------------------ETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEE
T ss_pred -------------------ecceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEe
Confidence 46778888877665444332 22111 257889999999987642
Q ss_pred -CCe---------------------------------EEEEECCCCeeEEEE------ccCCCCEEEEEEecCCCEEEEE
Q psy9327 142 -DQT---------------------------------IRIWYWQSRNCICVL------TGHNHYVMCAQFHPTDDIVVSA 181 (641)
Q Consensus 142 -Dg~---------------------------------I~vWd~~~~~~i~~l------~~h~~~V~sl~fsp~g~~lvSg 181 (641)
+.. +.++|+.++...... .....++..+.|+|++.+++..
T Consensus 193 D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~ 272 (465)
T d1xfda1 193 NDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTW 272 (465)
T ss_dssp ECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEE
T ss_pred cccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEE
Confidence 222 344444433221111 1233457889999998866553
Q ss_pred e-CCC---eEEEEecCCCceeeec
Q psy9327 182 S-LDQ---TIRVWDISGLRKKNVA 201 (641)
Q Consensus 182 s-~Dg---tI~IWD~~~~~~~~~~ 201 (641)
. .++ .+.++|..++++....
T Consensus 273 ~nR~q~~~~i~~~d~~tg~~~~~~ 296 (465)
T d1xfda1 273 LNRAQNVSILTLCDATTGVCTKKH 296 (465)
T ss_dssp EETTSCEEEEEEEETTTCCEEEEE
T ss_pred EccccccceEEEEcCCCCcEEEEE
Confidence 3 233 6888899888766544
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.89 E-value=0.00026 Score=74.20 Aligned_cols=238 Identities=11% Similarity=0.103 Sum_probs=136.5
Q ss_pred EEEccCCCeEEEEeCCCcEEEEECccCcccccccc---cccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcce
Q psy9327 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDE---HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLF 91 (641)
Q Consensus 15 l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~---h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~ 91 (641)
..|.+++.++.. ..+|.|.+||..+++...-+.. ..-.+....||||+++++.+...... | .
T Consensus 22 ~~W~~~~~~~~~-~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~-~--------r----- 86 (465)
T d1xfda1 22 AKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPI-Y--------Q----- 86 (465)
T ss_dssp CCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCC-S--------S-----
T ss_pred CEEeCCCcEEEE-eCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccce-e--------E-----
Confidence 368888876654 4578999999988764222222 23466778899999998876410000 0 0
Q ss_pred eeEEEeeCCCeEEEEECCCCeeEEEE--ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc-cCCCCE--
Q psy9327 92 RIKSVLGDDYKIKVWNYKQRKCIFTL--LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT-GHNHYV-- 166 (641)
Q Consensus 92 ~~~~~~s~Dg~I~vWD~~t~~~~~~~--~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~-~h~~~V-- 166 (641)
.+..+.+.++|+.+++..... ....+.+....|+|+|+.+|-.. ++.+.+.+..++..++... +..+.|
T Consensus 87 -----~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~n 160 (465)
T d1xfda1 87 -----HSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYN 160 (465)
T ss_dssp -----SCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEE
T ss_pred -----eeccccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeec
Confidence 024678999999988754322 22344566789999999988776 5778888887766554332 222212
Q ss_pred ---------------EEEEEecCCCEEEEEeC-CCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCC
Q psy9327 167 ---------------MCAQFHPTDDIVVSASL-DQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPK 230 (641)
Q Consensus 167 ---------------~sl~fsp~g~~lvSgs~-DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d 230 (641)
..+.|||||+.|+.... +..|..+.+...... ..+ .+..... |. ...-...
T Consensus 161 G~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~-~~p----~~~~~~Y--p~------~G~~np~ 227 (465)
T d1xfda1 161 GLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGS-IYP----TVKPYHY--PK------AGSENPS 227 (465)
T ss_dssp EECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSS-SSC----CCEEEEC--CB------TTSCCCE
T ss_pred cccchhhhhhhccccceEEECCCCCeEEEEEecccccceeeccccccc-ccc----eeeeeec--cc------cCCCCCc
Confidence 46779999999988764 344555554321000 000 0000000 00 0000012
Q ss_pred eeEEEecCCCcc--eeeec------CCcceEEEEEcCCccEEEEec----CCeEEEEEcCCCCeEecc
Q psy9327 231 HTLHICNRKMEP--LCNIH------ENTRVKSGAWDESGVFIYTTS----NHIKYAIVNGDHGIIRTL 286 (641)
Q Consensus 231 ~~I~i~d~~~~~--~~~~~------~~~~I~sla~~p~g~~L~t~s----~~~k~~l~~~~~g~I~~~ 286 (641)
..+.++|..... ..... ....+..+.|.|++.+++... +...+.+++..+|..+.+
T Consensus 228 ~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~ 295 (465)
T d1xfda1 228 ISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKK 295 (465)
T ss_dssp EEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEE
T ss_pred eeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEE
Confidence 245555532211 11111 123467899999998777654 344677788888776543
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.87 E-value=0.0031 Score=61.39 Aligned_cols=209 Identities=7% Similarity=-0.027 Sum_probs=132.5
Q ss_pred EEEEEccCCC-eEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcce
Q psy9327 13 KGLSFHPKRP-WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLF 91 (641)
Q Consensus 13 ~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~ 91 (641)
-+-.|++... +..+--..+.|.-||..+++. ..+ .....+.++++.+++.+++++
T Consensus 21 Egp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~-~~~-~~~~~~~~i~~~~dg~l~va~---------------------- 76 (295)
T d2ghsa1 21 EGPTFDPASGTAWWFNILERELHELHLASGRK-TVH-ALPFMGSALAKISDSKQLIAS---------------------- 76 (295)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEE-ECSSCEEEEEEEETTEEEEEE----------------------
T ss_pred eCCeEECCCCEEEEEECCCCEEEEEECCCCeE-EEE-ECCCCcEEEEEecCCCEEEEE----------------------
Confidence 4567887544 444545678999999888754 333 235678899999998877765
Q ss_pred eeEEEeeCCCeEEEEECCCCeeEEEEccC----CCCeEEEEEccCCCEEEEEeCC----CeEEEEECCCCeeEEEEccCC
Q psy9327 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGH----LDYIRTTFFHHEYPWILSASDD----QTIRIWYWQSRNCICVLTGHN 163 (641)
Q Consensus 92 ~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h----~~~V~~v~fsp~~~~l~sgs~D----g~I~vWd~~~~~~i~~l~~h~ 163 (641)
.+ .+.++|..+++........ ...+.++.+.|+|.+.++...+ +.-.+|.+..++......+ .
T Consensus 77 -------~~-gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~-~ 147 (295)
T d2ghsa1 77 -------DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFAD-I 147 (295)
T ss_dssp -------TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEE-E
T ss_pred -------eC-ccEEeecccceeeEEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeec-c
Confidence 34 5889999988754433221 1247889999999977665432 3445666666665444433 3
Q ss_pred CCEEEEEEecCCCEE-EEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcc
Q psy9327 164 HYVMCAQFHPTDDIV-VSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEP 242 (641)
Q Consensus 164 ~~V~sl~fsp~g~~l-vSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~ 242 (641)
.....++|+++++.+ ++-+..+.|..+++........-. ..+ ..+..
T Consensus 148 ~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~---~~~--------------------------~~~~~--- 195 (295)
T d2ghsa1 148 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGK---AEV--------------------------FIDST--- 195 (295)
T ss_dssp SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSC---CEE--------------------------EEECT---
T ss_pred CCcceeeecCCCceEEEeecccceeeEeeecccccccccc---eEE--------------------------EeccC---
Confidence 456789999999854 555667888888875321110000 000 00000
Q ss_pred eeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEeccccce
Q psy9327 243 LCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLPI 290 (641)
Q Consensus 243 ~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~p~ 290 (641)
......-.++.|.+|.+-++.-..+++..++.+...+..+++|.
T Consensus 196 ----~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp~G~~~~~i~lP~ 239 (295)
T d2ghsa1 196 ----GIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYEVPG 239 (295)
T ss_dssp ----TSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEECSC
T ss_pred ----cccccccceEEcCCCCEEeeeeCCCceEEecCCCcEeeEecCCC
Confidence 01234556788888876555557778888888777788887763
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.81 E-value=0.00069 Score=64.43 Aligned_cols=98 Identities=11% Similarity=0.112 Sum_probs=65.6
Q ss_pred CCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeC-C-----CeEEEEECCCCeeEEEEc------cCCCCE
Q psy9327 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD-D-----QTIRIWYWQSRNCICVLT------GHNHYV 166 (641)
Q Consensus 99 ~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~-D-----g~I~vWd~~~~~~i~~l~------~h~~~V 166 (641)
.++.|.+.|+.+++. ..+..+.+.+...+|||||++|+-.+. + ..|.+++..+++...... +.....
T Consensus 19 ~~~dl~~~d~~~g~~-~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~~~~~~~~~~~ 97 (281)
T d1k32a2 19 CCDDLWEHDLKSGST-RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFT 97 (281)
T ss_dssp ETTEEEEEETTTCCE-EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECS
T ss_pred eCCcEEEEECCCCCE-EEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEeeecCCCccCccccc
Confidence 356788889998875 456667788899999999998886542 2 247788887776543211 122345
Q ss_pred EEEEEecCCCEEEEEeCC------CeEEEEecCCCce
Q psy9327 167 MCAQFHPTDDIVVSASLD------QTIRVWDISGLRK 197 (641)
Q Consensus 167 ~sl~fsp~g~~lvSgs~D------gtI~IWD~~~~~~ 197 (641)
....|+|+|+.++..... ..+...+..+...
T Consensus 98 ~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (281)
T d1k32a2 98 DVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINF 134 (281)
T ss_dssp EEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEE
T ss_pred cccccCCCCCEEEEEEccCCCccceeeeeecCCCcee
Confidence 678999999988865332 2345555554443
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.76 E-value=0.0013 Score=62.26 Aligned_cols=166 Identities=8% Similarity=0.051 Sum_probs=103.9
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeC-CCcEEEEECccC-cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLH-NGVIQLWDYRMN-TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~-dg~I~iWD~~~~-~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
..+..+.+......|+|+|..++.... ++...++..... .................+++++..+...+
T Consensus 76 ~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 145 (269)
T d2hqsa1 76 RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTS---------- 145 (269)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEE----------
T ss_pred eEEeeeecccccceecCCCCeeeEeeecCCccceeecccccccceeeeeccccccccccccccccceecc----------
Confidence 345567788899999999998886654 444333333222 12222223444555667777777655554
Q ss_pred eeecccCCcceeeEEEeeCCC--eEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCC---eEEEEECCCCee
Q psy9327 81 ILESRNEPCLFRIKSVLGDDY--KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ---TIRIWYWQSRNC 155 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg--~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg---~I~vWd~~~~~~ 155 (641)
..++ .|.+.+...+.. .....+........|+|++.+++..+.++ .+.+.|...+..
T Consensus 146 -----------------~~~g~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~ 207 (269)
T d2hqsa1 146 -----------------DQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 207 (269)
T ss_dssp -----------------CTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred -----------------cccCCceEeeeecccccc-eeeecccccccccccccccceeEEEeecCCceeeeEeecccccc
Confidence 1444 466666665543 33444667778889999999888766543 455556555543
Q ss_pred EEEEccCCCCEEEEEEecCCCEEEEEeC---CCeEEEEecCCCcee
Q psy9327 156 ICVLTGHNHYVMCAQFHPTDDIVVSASL---DQTIRVWDISGLRKK 198 (641)
Q Consensus 156 i~~l~~h~~~V~sl~fsp~g~~lvSgs~---DgtI~IWD~~~~~~~ 198 (641)
....+........|+|||+.|+-.+. ...+.+|++.++...
T Consensus 208 --~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~~ 251 (269)
T d2hqsa1 208 --QVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKA 251 (269)
T ss_dssp --EECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEE
T ss_pred --eEeecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCEE
Confidence 33345666788899999998875543 346778888765543
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=97.64 E-value=0.0013 Score=64.82 Aligned_cols=145 Identities=9% Similarity=0.078 Sum_probs=98.5
Q ss_pred CCeEEEEEccCCCeEEEEeC------CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 10 ARVKGLSFHPKRPWILSSLH------NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~------dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
...+.+++.|+|++.++... .+.+..++.. ++.+..+...-...++|+|+|+++.|..+.
T Consensus 130 ~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~d-g~~~~~~~~~~~~pnGia~s~dg~~lyvad------------- 195 (319)
T d2dg1a1 130 YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD-FRTVTPIIQNISVANGIALSTDEKVLWVTE------------- 195 (319)
T ss_dssp CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT-SCCEEEEEEEESSEEEEEECTTSSEEEEEE-------------
T ss_pred cCCcceeEEeccceeecccccccccCcceeEEEecc-cceeEEEeeccceeeeeeeccccceEEEec-------------
Confidence 35778999999986665432 1234444433 333343333444568899999999776665
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCC-eeE-------EEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQR-KCI-------FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~-~~~-------~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
+..+.|..||+... ... ............+++.++|++.++....+.|.+||. .++.
T Consensus 196 --------------~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~ 260 (319)
T d2dg1a1 196 --------------TTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYP 260 (319)
T ss_dssp --------------GGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCE
T ss_pred --------------ccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcE
Confidence 37889999997632 111 111122234678999999999999899999999995 6887
Q ss_pred EEEEc------cCCCCEEEEEEecCCCEEEEEeC
Q psy9327 156 ICVLT------GHNHYVMCAQFHPTDDIVVSASL 183 (641)
Q Consensus 156 i~~l~------~h~~~V~sl~fsp~g~~lvSgs~ 183 (641)
+..+. ++...+++++|.|++..+++.+.
T Consensus 261 l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~~ 294 (319)
T d2dg1a1 261 IGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 294 (319)
T ss_dssp EEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred EEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEcC
Confidence 77764 34556889999998877666554
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.28 E-value=0.0098 Score=57.66 Aligned_cols=141 Identities=11% Similarity=0.114 Sum_probs=100.1
Q ss_pred CCeEEEEEccCCCeEEEEeC----CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 10 ARVKGLSFHPKRPWILSSLH----NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~----dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
.+++.+.+.|+|++.++... .+.-.+|.+..++....+ ..-..-++++|++++..+..+.
T Consensus 103 ~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~-~~~~~~Ng~~~s~d~~~l~~~d--------------- 166 (295)
T d2ghsa1 103 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLF-ADISIPNSICFSPDGTTGYFVD--------------- 166 (295)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEE-EEESSEEEEEECTTSCEEEEEE---------------
T ss_pred ccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEe-eccCCcceeeecCCCceEEEee---------------
Confidence 36888999999986665543 234567776666544333 3344568899999999777665
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCC--------eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQR--------KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~--------~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~ 157 (641)
+..+.|..+++... .....+.+..+...++++..+|++.++.-..+.|..||. +++.+.
T Consensus 167 ------------t~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~ 233 (295)
T d2ghsa1 167 ------------TKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIA 233 (295)
T ss_dssp ------------TTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEE
T ss_pred ------------cccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEee
Confidence 37888999987421 112233445567889999999998888878899999995 677788
Q ss_pred EEccCCCCEEEEEEe-cCCCEEE
Q psy9327 158 VLTGHNHYVMCAQFH-PTDDIVV 179 (641)
Q Consensus 158 ~l~~h~~~V~sl~fs-p~g~~lv 179 (641)
.+.-....+++++|- |+.+.|+
T Consensus 234 ~i~lP~~~~T~~~FGG~d~~~Ly 256 (295)
T d2ghsa1 234 RYEVPGKQTTCPAFIGPDASRLL 256 (295)
T ss_dssp EEECSCSBEEEEEEESTTSCEEE
T ss_pred EecCCCCceEEEEEeCCCCCEEE
Confidence 887656679999996 5655544
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.24 E-value=0.0069 Score=57.03 Aligned_cols=187 Identities=9% Similarity=0.042 Sum_probs=97.4
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeC-CC-----cEEEEECccCcccccc--c----ccccCeEEEEEeCCCCEEEEec
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLH-NG-----VIQLWDYRMNTLLEKF--D----EHEGPVRGICFHNQQPIFVSGG 70 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~-dg-----~I~iWD~~~~~~l~~~--~----~h~~~V~~i~fsp~~~~l~sgs 70 (641)
+.+..+.+.+...+|||||++||.... ++ .|.+++..+++...-. . .........+|+|++..++...
T Consensus 34 ~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 113 (281)
T d1k32a2 34 RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTD 113 (281)
T ss_dssp EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEEC
T ss_pred EEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEeeecCCCccCccccccccccCCCCCEEEEEE
Confidence 456667788999999999999885532 22 3667777666543211 1 1223567889999999888753
Q ss_pred eee-------EEee--ec-eeeecccCCcceeeEEEeeCCCeEEEEE----------------------CCCCeeEEEEc
Q psy9327 71 KMI-------VMAY--QG-CILESRNEPCLFRIKSVLGDDYKIKVWN----------------------YKQRKCIFTLL 118 (641)
Q Consensus 71 ~~~-------~~~~--~~-~~~~~~~~~~~~~~~~~~s~Dg~I~vWD----------------------~~t~~~~~~~~ 118 (641)
... .... .+ ........+... ....++.-.++. ......... .
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 188 (281)
T d1k32a2 114 AMQPFSSMTCLYRVENDGINFVPLNLGPATH----ILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKI-V 188 (281)
T ss_dssp TTSSSTTCCEEEEEEGGGTEEEECCSCSCSE----EEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEE-E
T ss_pred ccCCCccceeeeeecCCCceeEEecCCccce----eeecCCCeEEEeeccccceeeeeccCCcceeeeeccccceeec-c
Confidence 100 0011 11 111001111000 111222222222 111111111 1
Q ss_pred cCCCCeEEEEEccCCCEEEEEe-C--CCeEEEEECCCCeeEEEEccC-CCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 119 GHLDYIRTTFFHHEYPWILSAS-D--DQTIRIWYWQSRNCICVLTGH-NHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 119 ~h~~~V~~v~fsp~~~~l~sgs-~--Dg~I~vWd~~~~~~i~~l~~h-~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
.+........++++. ++..+ . ...|.++|+.++... .+..+ ...+ ..|+|||+.|+- +.++.+.++|+.+
T Consensus 189 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~d~~g~~~~-~lt~~~~~~~--~~~SpDG~~I~f-~~~~~l~~~d~~~ 262 (281)
T d1k32a2 189 DMSTHVSSPVIVGHR--IYFITDIDGFGQIYSTDLDGKDLR-KHTSFTDYYP--RHLNTDGRRILF-SKGGSIYIFNPDT 262 (281)
T ss_dssp CCSSCCEEEEEETTE--EEEEECTTSSCEEEEEETTSCSCE-ECCCCCSSCE--EEEEESSSCEEE-EETTEEEEECTTT
T ss_pred CCccccceeeeeccc--cceecccccccceEEEeCCCCceE-EeecCCCccc--ccCcCCCCEEEE-EeCCEEEEEECCC
Confidence 223333444555543 33332 2 346778888766543 33322 3333 468999988775 3467899999988
Q ss_pred Cceeee
Q psy9327 195 LRKKNV 200 (641)
Q Consensus 195 ~~~~~~ 200 (641)
++....
T Consensus 263 g~~~~i 268 (281)
T d1k32a2 263 EKIEKI 268 (281)
T ss_dssp CCEEEC
T ss_pred CCEEEe
Confidence 776544
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.85 E-value=0.2 Score=47.11 Aligned_cols=162 Identities=9% Similarity=-0.048 Sum_probs=105.1
Q ss_pred CCCCeEEEEEccCCCeEEEE-eCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeeccc
Q psy9327 8 KSARVKGLSFHPKRPWILSS-LHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRN 86 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg-~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~ 86 (641)
+...+.+++|++.++.+.-+ ..++.|+..++..+............+.++++..-+..|..+.
T Consensus 34 ~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d---------------- 97 (263)
T d1npea_ 34 PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTD---------------- 97 (263)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEE----------------
T ss_pred CCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEec----------------
Confidence 34457789999887777655 4567888888875544333333335688999987666665554
Q ss_pred CCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeC-CC--eEEEEECCCCeeEEEEccCC
Q psy9327 87 EPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD-DQ--TIRIWYWQSRNCICVLTGHN 163 (641)
Q Consensus 87 ~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~-Dg--~I~vWd~~~~~~i~~l~~h~ 163 (641)
...+.|.+.++........+.........++++|...++.-... .+ .|.--++.............
T Consensus 98 -----------~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~ 166 (263)
T d1npea_ 98 -----------SQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNL 166 (263)
T ss_dssp -----------TTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTC
T ss_pred -----------cCCCEEEEEecCCceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeecc
Confidence 26789999998766544344444567899999997776654432 22 34444555443333333344
Q ss_pred CCEEEEEEecCCCEEEEE-eCCCeEEEEecCCCc
Q psy9327 164 HYVMCAQFHPTDDIVVSA-SLDQTIRVWDISGLR 196 (641)
Q Consensus 164 ~~V~sl~fsp~g~~lvSg-s~DgtI~IWD~~~~~ 196 (641)
.....+++.+.+..|..+ ...++|...|+.+..
T Consensus 167 ~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~ 200 (263)
T d1npea_ 167 GLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG 200 (263)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE
T ss_pred cccceEEEeecCcEEEEEeCCCCEEEEEECCCCC
Confidence 567899999887766554 456788877776543
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.48 E-value=0.31 Score=45.69 Aligned_cols=165 Identities=12% Similarity=0.007 Sum_probs=104.0
Q ss_pred CCeEEEEEccCCCeEEEE-eCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 10 ARVKGLSFHPKRPWILSS-LHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg-~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
..+.+|++.+.+..|..+ ...+.|.+.++.................+++++|...++.....
T Consensus 77 ~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~----------------- 139 (266)
T d1ijqa1 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDW----------------- 139 (266)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEEC-----------------
T ss_pred CCcceEEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEecc-----------------
Confidence 456788998765555544 45678999998755443334444566789999996665554431
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEE-EEeCCCeEEEEECCCCeeEEEE--ccCCCC
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWYWQSRNCICVL--TGHNHY 165 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~-sgs~Dg~I~vWd~~~~~~i~~l--~~h~~~ 165 (641)
+..+.|.-.++.................++++.+.+..|. +-+..+.|...|+......... ......
T Consensus 140 ---------~~~~~I~r~~~dGs~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~~~~ 210 (266)
T d1ijqa1 140 ---------GTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAH 210 (266)
T ss_dssp ---------SSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSS
T ss_pred ---------CCCcceeEeccCCCceecccccccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCCcccc
Confidence 2455677777764443333344456678999998776555 4466789999998654433333 223345
Q ss_pred EEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeec
Q psy9327 166 VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 166 V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~ 201 (641)
..++++. ++.+.++-..++.|...+..++.....+
T Consensus 211 p~~lav~-~~~ly~td~~~~~I~~~~~~~g~~~~~~ 245 (266)
T d1ijqa1 211 PFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 245 (266)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred cEEEEEE-CCEEEEEECCCCeEEEEECCCCcceEEE
Confidence 6677776 3444555556788888887776554443
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.48 E-value=0.35 Score=45.23 Aligned_cols=131 Identities=11% Similarity=-0.021 Sum_probs=87.0
Q ss_pred eEEEEeCCCcEEEEECccCccc-----ccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEe
Q psy9327 23 WILSSLHNGVIQLWDYRMNTLL-----EKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVL 97 (641)
Q Consensus 23 ~Lasg~~dg~I~iWD~~~~~~l-----~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (641)
+|+-+.. +.|+-.+++..+.- .....+...+.+++|.+....+..+.
T Consensus 3 fLl~s~~-~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd--------------------------- 54 (263)
T d1npea_ 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTD--------------------------- 54 (263)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEE---------------------------
T ss_pred EEEEeCC-CeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEE---------------------------
Confidence 3444433 46766666533221 11233455688899998887777665
Q ss_pred eCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEE-EEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCC
Q psy9327 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWI-LSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176 (641)
Q Consensus 98 s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l-~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~ 176 (641)
..++.|+..++..+.....+......+.++++..-+..| ++-...+.|.+.++....+...+......+..++++|...
T Consensus 55 ~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g 134 (263)
T d1npea_ 55 ISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRG 134 (263)
T ss_dssp TTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTT
T ss_pred CCCCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCcEEEEecccC
Confidence 277889999988766555555445678999998755545 4556678999999886655444444456789999999776
Q ss_pred EEEEE
Q psy9327 177 IVVSA 181 (641)
Q Consensus 177 ~lvSg 181 (641)
+++..
T Consensus 135 ~ly~t 139 (263)
T d1npea_ 135 NLYWT 139 (263)
T ss_dssp EEEEE
T ss_pred cEEEe
Confidence 66544
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.92 E-value=0.74 Score=43.61 Aligned_cols=236 Identities=10% Similarity=0.101 Sum_probs=141.8
Q ss_pred EEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceee
Q psy9327 14 GLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRI 93 (641)
Q Consensus 14 ~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~ 93 (641)
+.-.||..+.+|.-+ ..+++++|+++.+.++.+. ...+|.--.|-.+..+-++.
T Consensus 67 sAIMhP~~~IiALra-g~~LQiFnletK~klks~~-~~e~VvfWkWis~~~L~lVT------------------------ 120 (327)
T d1utca2 67 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISLNTVALVT------------------------ 120 (327)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEE-CSSCCCEEEESSSSEEEEEC------------------------
T ss_pred hhhcCCCCcEEEEec-CCeEEEEehhHhhhhceEE-cCCCcEEEEecCCCEEEEEc------------------------
Confidence 345788888887666 4689999999998877764 44577677776665444443
Q ss_pred EEEeeCCCeEEEEECCC-CeeEEEEccCCC----CeEEEEEccCCCEEEEEeC-------CCeEEEEECCCCeeEEEEcc
Q psy9327 94 KSVLGDDYKIKVWNYKQ-RKCIFTLLGHLD----YIRTTFFHHEYPWILSASD-------DQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 94 ~~~~s~Dg~I~vWD~~t-~~~~~~~~~h~~----~V~~v~fsp~~~~l~sgs~-------Dg~I~vWd~~~~~~i~~l~~ 161 (641)
+..|.-|+++. ..+...|+.|.. .|..-..+++++|++..|- .|.+.+|..+.+ .-+.+.|
T Consensus 121 ------~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~-~sQ~ieG 193 (327)
T d1utca2 121 ------DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEG 193 (327)
T ss_dssp ------SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECC
T ss_pred ------CCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC-cCccccc
Confidence 56799999954 357777776643 5777788899999876442 467889997654 4567777
Q ss_pred CCCCEEEEEEecCC---CEEEEE---eCCCeEEEEecCCCce-eeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEE
Q psy9327 162 HNHYVMCAQFHPTD---DIVVSA---SLDQTIRVWDISGLRK-KNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLH 234 (641)
Q Consensus 162 h~~~V~sl~fsp~g---~~lvSg---s~DgtI~IWD~~~~~~-~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~ 234 (641)
|.+....+.+.-+. ..++-+ +..++++|-++..... -..++ +.... ..+.|-
T Consensus 194 haa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~---kk~vd-i~fppe----------------- 252 (327)
T d1utca2 194 HAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFP---KKAVD-VFFPPE----------------- 252 (327)
T ss_dssp SEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCC---CEEEE-CCCCTT-----------------
T ss_pred eeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCc---ceeEE-EECCcc-----------------
Confidence 75544433332111 122222 2234666666644211 00000 00000 000000
Q ss_pred EecCCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe----ccccceEEEEE--cCcEEEEEeCCCC
Q psy9327 235 ICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR----TLDLPIYITKI--KGNQVYYLDRECS 308 (641)
Q Consensus 235 i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~----~~d~p~~~~~~--~g~~v~~~~~dg~ 308 (641)
..+.-..++..++.-..++.-+.-|-+.+++.++|+.- .-..+++.... +..-+++..++|.
T Consensus 253 ------------a~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~i~~nRIs~~~iF~~a~~~~~~Gi~~VNr~Gq 320 (327)
T d1utca2 253 ------------AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQ 320 (327)
T ss_dssp ------------CTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTSE
T ss_pred ------------ccCCcEEEEEeeccCCEEEEEecCcEEEEEEcccccEEEEeecCCCceEEeccCCCCceEEEECCCCe
Confidence 01333445677777677888888888888888888743 33445554333 3457888888888
Q ss_pred eEEEEeC
Q psy9327 309 PHVLRID 315 (641)
Q Consensus 309 i~v~~~~ 315 (641)
+....+|
T Consensus 321 Vl~vsvd 327 (327)
T d1utca2 321 VLSVCVE 327 (327)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 8776554
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=95.90 E-value=0.69 Score=48.46 Aligned_cols=107 Identities=7% Similarity=0.005 Sum_probs=63.5
Q ss_pred eEEEEe-CCCcEEEEECc-cCccccccccccc-----------CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 23 WILSSL-HNGVIQLWDYR-MNTLLEKFDEHEG-----------PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 23 ~Lasg~-~dg~I~iWD~~-~~~~l~~~~~h~~-----------~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
.+..++ .++.|...|.. +|+.+.+++.... .-+++++.. ..++.++
T Consensus 64 ~vyv~t~~~~~v~Alda~~tG~~~W~~~~~~~~~~~~~~~~~~~~rg~a~~~--~~i~~~~------------------- 122 (571)
T d2ad6a1 64 MMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGA--GQIVKKQ------------------- 122 (571)
T ss_dssp EEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEET--TEEEEEC-------------------
T ss_pred EEEEecCCCCeEEEEeCCCCCceEEEecCCCCcccccccccCcCCCcceeeC--CeEEEEe-------------------
Confidence 344444 46888888874 6888877642110 112344432 2344444
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCC---C-CeEEEEEccCCCEEEEEe------CCCeEEEEECCCCeeEEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL---D-YIRTTFFHHEYPWILSAS------DDQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~---~-~V~~v~fsp~~~~l~sgs------~Dg~I~vWd~~~~~~i~~l 159 (641)
.|+.+.-.|.++|+.+....... + .++.--...++. ++.++ .+|.|+-+|..+++.+.++
T Consensus 123 ---------~~g~l~alda~tG~~~w~~~~~~~~~~~~~t~~p~v~~~~-vivg~~~~~~~~~G~v~a~D~~TG~~~W~~ 192 (571)
T d2ad6a1 123 ---------ANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDT-VLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp ---------TTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTE-EEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred ---------CCCcEEeeehhhhhhhccccccccccccceeecCeEeCCe-EEEeeccccccccCcEEEEECCCCcEEEEE
Confidence 78999999999999887764221 1 111111111343 44443 3688999999999988776
Q ss_pred c
Q psy9327 160 T 160 (641)
Q Consensus 160 ~ 160 (641)
.
T Consensus 193 ~ 193 (571)
T d2ad6a1 193 F 193 (571)
T ss_dssp E
T ss_pred e
Confidence 4
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=95.74 E-value=0.67 Score=46.18 Aligned_cols=86 Identities=8% Similarity=-0.021 Sum_probs=60.8
Q ss_pred eCCCeEEEEECCCCeeEEEEcc-CCCCeEEEEEcc--CCCEEEEEeCCC------------------eEEEEECCCCeeE
Q psy9327 98 GDDYKIKVWNYKQRKCIFTLLG-HLDYIRTTFFHH--EYPWILSASDDQ------------------TIRIWYWQSRNCI 156 (641)
Q Consensus 98 s~Dg~I~vWD~~t~~~~~~~~~-h~~~V~~v~fsp--~~~~l~sgs~Dg------------------~I~vWd~~~~~~i 156 (641)
..+.+|.+-|+++.++.....- ....+.++...+ +..+++.++.+. .+.++|..+.+..
T Consensus 107 kan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t~ID~~tm~V~ 186 (459)
T d1fwxa2 107 KANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVA 186 (459)
T ss_dssp TTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEEEEETTTTEEE
T ss_pred CCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEEEEecCCceEE
Confidence 3889999999999988665433 344566666654 455777766532 3678899888876
Q ss_pred EEEccCCCCEEEEEEecCCCEEEEEeCC
Q psy9327 157 CVLTGHNHYVMCAQFHPTDDIVVSASLD 184 (641)
Q Consensus 157 ~~l~~h~~~V~sl~fsp~g~~lvSgs~D 184 (641)
....- ......+.++|+|+++++.|.+
T Consensus 187 ~QV~V-~g~ld~~~~s~dGK~af~TsyN 213 (459)
T d1fwxa2 187 WQVLV-SGNLDNCDADYEGKWAFSTSYN 213 (459)
T ss_dssp EEEEE-SSCCCCEEECSSSSEEEEEESC
T ss_pred EEeee-CCChhccccCCCCCEEEEEecc
Confidence 66542 2345678999999999988754
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=95.50 E-value=0.87 Score=47.88 Aligned_cols=112 Identities=7% Similarity=-0.002 Sum_probs=67.6
Q ss_pred CCeEEEEeCCCcEEEEEC-ccCcccccccccc-----------cCeEEEEEeCC----CCEEEEeceeeEEeeeceeeec
Q psy9327 21 RPWILSSLHNGVIQLWDY-RMNTLLEKFDEHE-----------GPVRGICFHNQ----QPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 21 g~~Lasg~~dg~I~iWD~-~~~~~l~~~~~h~-----------~~V~~i~fsp~----~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
|.+.++++.++.+...|. .+|+.+.+++... ..-+++++.++ +..++.+.
T Consensus 63 g~ly~~t~~~~~v~a~d~~~tG~~~W~~~~~~~~~~~~~~~~~~~~RGv~~~~~~~~~~~~v~~~t-------------- 128 (596)
T d1w6sa_ 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQ-------------- 128 (596)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEEC--------------
T ss_pred CEEEEeeCCCCcEEEEeCCCCCCEEEEecCCCCcccccccccccccceeEEecCCCCCceEEEEEe--------------
Confidence 433444555677777786 5788887764211 11245666543 23566665
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCe-EEEEEcc--CCCEEEEEeC------CCeEEEEECCCCee
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYI-RTTFFHH--EYPWILSASD------DQTIRIWYWQSRNC 155 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V-~~v~fsp--~~~~l~sgs~------Dg~I~vWd~~~~~~ 155 (641)
.|+.+.-.|.++|+.+..+....... ..+.-.| -+..++.|+. .|.|+-+|.++++.
T Consensus 129 --------------~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~ 194 (596)
T d1w6sa_ 129 --------------LDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQ 194 (596)
T ss_dssp --------------TTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCE
T ss_pred --------------CCCCeEeeccccCceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcE
Confidence 89999999999999998875321100 0011111 1234555432 48899999999998
Q ss_pred EEEEc
Q psy9327 156 ICVLT 160 (641)
Q Consensus 156 i~~l~ 160 (641)
+-++.
T Consensus 195 ~W~~~ 199 (596)
T d1w6sa_ 195 VWRAY 199 (596)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 87764
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.36 E-value=1.1 Score=41.67 Aligned_cols=161 Identities=10% Similarity=-0.065 Sum_probs=102.1
Q ss_pred CCCCeEEEEEccCCCeEEEEe-CCCcEEEEECccCcc---c-ccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 8 KSARVKGLSFHPKRPWILSSL-HNGVIQLWDYRMNTL---L-EKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~-~dg~I~iWD~~~~~~---l-~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
....+.+++|++.++.+.-.. .++.|.-.++..... . .........+.++++.+.+..|..+.
T Consensus 28 ~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~~~lY~~d------------ 95 (266)
T d1ijqa1 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD------------ 95 (266)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEE------------
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeeccceEEEEe------------
Confidence 345677899998887776554 456676666543211 1 11222334567899987666666554
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEe--CCCeEEEEECCCCeeEEEEc
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS--DDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs--~Dg~I~vWd~~~~~~i~~l~ 160 (641)
...++|.+.++.................+++++|...++.-.. ..+.|.-.++..........
T Consensus 96 ---------------~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~ 160 (266)
T d1ijqa1 96 ---------------SVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 160 (266)
T ss_dssp ---------------TTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC
T ss_pred ---------------cCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceecccc
Confidence 2678999999987665555555667789999999665554433 34567777765444333333
Q ss_pred cCCCCEEEEEEecCCCEEEEE-eCCCeEEEEecCCC
Q psy9327 161 GHNHYVMCAQFHPTDDIVVSA-SLDQTIRVWDISGL 195 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~lvSg-s~DgtI~IWD~~~~ 195 (641)
........+++.+.+..|.-+ +..++|...|+.+.
T Consensus 161 ~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~ 196 (266)
T d1ijqa1 161 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (266)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred cccceeeEEEeeccccEEEEecCCcCEEEEEECCCC
Confidence 445677899999877766555 55678887777653
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=94.70 E-value=1.7 Score=45.18 Aligned_cols=107 Identities=11% Similarity=0.013 Sum_probs=65.9
Q ss_pred eEEEEeCCCcEEEEECccCccccccccccc-----------CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcce
Q psy9327 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEG-----------PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLF 91 (641)
Q Consensus 23 ~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~-----------~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~ 91 (641)
.|..++.++.|.-.|.++|+.+.+++.... .-..++.. +..++.+.
T Consensus 68 ~vyv~t~~~~v~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~--------------------- 124 (560)
T d1kv9a2 68 VIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--GDKVYVGT--------------------- 124 (560)
T ss_dssp EEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--BTEEEEEC---------------------
T ss_pred EEEEECCCCeEEEEeCCCCCEEEEECCCCCccccccccccccccCccee--CCeEEEEe---------------------
Confidence 566777889999999999998887642210 00111211 22445554
Q ss_pred eeEEEeeCCCeEEEEECCCCeeEEEEccCCCC-eEEEEEcc---CCCEEEEEeC------CCeEEEEECCCCeeEEEEc
Q psy9327 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY-IRTTFFHH---EYPWILSASD------DQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 92 ~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~-V~~v~fsp---~~~~l~sgs~------Dg~I~vWd~~~~~~i~~l~ 160 (641)
.|+.+.-.|..+|+.+..+..+... -..+.-.| ++ .++.++. .|.|.-+|.++++.+..+.
T Consensus 125 -------~~g~l~Alda~tG~~~w~~~~~~~~~~~~~~~~p~v~~~-~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~ 195 (560)
T d1kv9a2 125 -------LDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (560)
T ss_dssp -------TTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred -------CCCEEEEEECCCCcEEeccCccCcccceeeeeeeeeecC-cccccccceeccccceEEEEECCCceEEeeee
Confidence 7999999999999998877543211 00111111 23 3344332 3679999999999887774
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=94.41 E-value=0.4 Score=47.86 Aligned_cols=169 Identities=11% Similarity=0.112 Sum_probs=100.9
Q ss_pred EEEEcc---CCCeEEEEe-CCCcEEEEECccCccccccc-ccccCeEEEEEe--CCCCEEEEeceeeEE-eeeceeeecc
Q psy9327 14 GLSFHP---KRPWILSSL-HNGVIQLWDYRMNTLLEKFD-EHEGPVRGICFH--NQQPIFVSGGKMIVM-AYQGCILESR 85 (641)
Q Consensus 14 ~l~fsp---dg~~Lasg~-~dg~I~iWD~~~~~~l~~~~-~h~~~V~~i~fs--p~~~~l~sgs~~~~~-~~~~~~~~~~ 85 (641)
.++|.. ||+|+.+.. .++.|-+-|+++.+.....+ .....+.++... |+..+++.+++.... .-+|..+..
T Consensus 89 ~~S~TdGtyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d- 167 (459)
T d1fwxa2 89 HMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMED- 167 (459)
T ss_dssp EEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTC-
T ss_pred cccccCCccceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccc-
Confidence 556654 889888776 58899999998887644332 234456777665 456687777621110 001100000
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCC---------------eEEEEEC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ---------------TIRIWYW 150 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg---------------~I~vWd~ 150 (641)
. ....+.+.++|..+.+......- .+....++++++|+|+++.+.+. .+.++|+
T Consensus 168 ----~------~~y~~~~t~ID~~tm~V~~QV~V-~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~ 236 (459)
T d1fwxa2 168 ----V------ANYVNVFTAVDADKWEVAWQVLV-SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNI 236 (459)
T ss_dssp ----G------G-EEEEEEEEETTTTEEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEH
T ss_pred ----h------hhcceEEEEEecCCceEEEEeee-CCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEech
Confidence 0 00123577889999888777653 34566799999999999876431 1334443
Q ss_pred -----------------------CCC---eeEEEEccCCCCEEEEEEecCCCEEEEEe-CCCeEEEEecCCC
Q psy9327 151 -----------------------QSR---NCICVLTGHNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDISGL 195 (641)
Q Consensus 151 -----------------------~~~---~~i~~l~~h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~~ 195 (641)
+.. ..+..+.- ......+.++|||.++++++ .+.++.|+|++..
T Consensus 237 ~rie~av~~Gk~~eingV~VVD~~~~~~~~v~~yIPV-pKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki 307 (459)
T d1fwxa2 237 AEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 307 (459)
T ss_dssp HHHHHHHHHTCSEEETTEEEEECSGG--CSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred HHhHHhhhcCCcEEeCCceeecccccCCcceeEEEec-CCCCCceEECCCCCEEEEeCCcCCcEEEEEehhh
Confidence 211 11111111 11234678999999876655 5899999999753
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=93.21 E-value=0.61 Score=45.36 Aligned_cols=159 Identities=9% Similarity=0.014 Sum_probs=98.1
Q ss_pred CeEEEEEccCCCeEEEEeCCC-----------cEEEEECccCcccccc---cccccCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 11 RVKGLSFHPKRPWILSSLHNG-----------VIQLWDYRMNTLLEKF---DEHEGPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~dg-----------~I~iWD~~~~~~l~~~---~~h~~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
++.......+|+.++.|+.+. .+.+||..+++-...- ..|.....+.++.+++.+++.|+
T Consensus 21 ~~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg------ 94 (387)
T d1k3ia3 21 PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGG------ 94 (387)
T ss_dssp CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECS------
T ss_pred ccEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeec------
Confidence 344444556888888888531 3778999887543221 12333345678889999999987
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc-CCCCeEEEEEccCCCEEEEEeCC------CeEEEEE
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG-HLDYIRTTFFHHEYPWILSASDD------QTIRIWY 149 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~-h~~~V~~v~fsp~~~~l~sgs~D------g~I~vWd 149 (641)
.....+.+||..+.+....-.. ....-.+++..+++..++.|+.+ ..+.+||
T Consensus 95 ---------------------~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd 153 (387)
T d1k3ia3 95 ---------------------NDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYS 153 (387)
T ss_dssp ---------------------SSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEE
T ss_pred ---------------------CCCcceeEecCccCcccccccccccccccceeeecCCceeeeccccccccccceeeeec
Confidence 2456899999988765432111 11122357778899988888753 3689999
Q ss_pred CCCCeeEEEEcc----------CC-----CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce
Q psy9327 150 WQSRNCICVLTG----------HN-----HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 197 (641)
Q Consensus 150 ~~~~~~i~~l~~----------h~-----~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~ 197 (641)
..+.+-. .+.. +. +.-..+...++|..++.+..++.+.++|..+...
T Consensus 154 ~~~~~W~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~ 215 (387)
T d1k3ia3 154 PSSKTWT-SLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDV 215 (387)
T ss_dssp TTTTEEE-EETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEE
T ss_pred CCCCcee-ecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCcccCcE
Confidence 9887632 2210 00 0011123345677777777777777777766543
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.18 E-value=0.73 Score=48.22 Aligned_cols=58 Identities=12% Similarity=0.021 Sum_probs=38.8
Q ss_pred CeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeec
Q psy9327 143 QTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 143 g~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~ 201 (641)
|.+.-+|..+++.+.+... ..+..+-...-.+.+++.|+.|+.++.+|.++++.+=..
T Consensus 444 G~l~AiD~~TG~~~W~~~~-~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~ 501 (571)
T d2ad6a1 444 GQIRAFDLTTGKAKWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNF 501 (571)
T ss_dssp EEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ccEEEeccCCCceeeEcCC-CCCCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEE
Confidence 4677788888887765531 111111112224778889999999999999998876443
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=92.81 E-value=4.4 Score=38.86 Aligned_cols=158 Identities=13% Similarity=0.150 Sum_probs=92.1
Q ss_pred eEEEEEccCCCeEEEEeC------------CCcEEEEECccCcc-ccccccc-------ccCeEEEEEe--CCCC-EEEE
Q psy9327 12 VKGLSFHPKRPWILSSLH------------NGVIQLWDYRMNTL-LEKFDEH-------EGPVRGICFH--NQQP-IFVS 68 (641)
Q Consensus 12 V~~l~fspdg~~Lasg~~------------dg~I~iWD~~~~~~-l~~~~~h-------~~~V~~i~fs--p~~~-~l~s 68 (641)
--.++..|+|..+++++. .|.|.++|+.+.+. ...+.-. .-.-.++... +++. +|++
T Consensus 37 ~EDi~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~v 116 (340)
T d1v04a_ 37 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 116 (340)
T ss_dssp CCEEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEE
Confidence 346888999987777642 48899999876432 1111111 1123455542 3444 3333
Q ss_pred eceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC--ee--EEEEcc-CCCCeEEEEEccCCCEEEEEeC--
Q psy9327 69 GGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR--KC--IFTLLG-HLDYIRTTFFHHEYPWILSASD-- 141 (641)
Q Consensus 69 gs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~--~~--~~~~~~-h~~~V~~v~fsp~~~~l~sgs~-- 141 (641)
... .....+|.+|++... +. +.++.. ......++++..++.+++|-..
T Consensus 117 vnH-------------------------~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~ 171 (340)
T d1v04a_ 117 VNH-------------------------PGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYF 171 (340)
T ss_dssp EEC-------------------------STTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSC
T ss_pred Eec-------------------------cCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccC
Confidence 320 014567888887533 22 223332 2345789999999988777311
Q ss_pred -------------CCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEE-EEeCCCeEEEEecCCC
Q psy9327 142 -------------DQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVV-SASLDQTIRVWDISGL 195 (641)
Q Consensus 142 -------------Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lv-Sgs~DgtI~IWD~~~~ 195 (641)
-.+..+|.+..++..... ......+.++++|+++.|+ +-+..++|++|++...
T Consensus 172 ~~~~~~~~e~~~~~~~g~v~~~~~~~~~~~~-~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~ 238 (340)
T d1v04a_ 172 IDPYLKSWEMHLGLAWSFVTYYSPNDVRVVA-EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHAN 238 (340)
T ss_dssp CSHHHHHHHHHTTCCCEEEEEECSSCEEEEE-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred cChhhhhhhHhhcCCceeEEEEcCCceEEEc-CCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCC
Confidence 123455555555443223 3346788999999987665 4556789999998753
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=92.47 E-value=4.4 Score=38.06 Aligned_cols=153 Identities=10% Similarity=0.173 Sum_probs=101.3
Q ss_pred CCeEEEEEccCCCeEEEEeC-------CCcEEEEECccCcccccccccccCeEEEEEeCCC---CEEEEeceeeEEeeec
Q psy9327 10 ARVKGLSFHPKRPWILSSLH-------NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ---PIFVSGGKMIVMAYQG 79 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~-------dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~---~~l~sgs~~~~~~~~~ 79 (641)
..|-.-..+++++|++..|- .|.+++|..+.+ .-..+++|.+.-..+.+.-+. ..|+-+.+
T Consensus 148 ~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r-------- 218 (327)
T d1utca2 148 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVR-------- 218 (327)
T ss_dssp CEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEE--------
T ss_pred ceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC-cCccccceeeeeEEEEcCCCCCCceEEEEEEC--------
Confidence 46777888899999875532 477899998755 334566665544444332111 12222221
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCC---------eeEEEEc---cCCCCeEEEEEccCCCEEEEEeCCCeEEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQR---------KCIFTLL---GHLDYIRTTFFHHEYPWILSASDDQTIRI 147 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~---------~~~~~~~---~h~~~V~~v~fsp~~~~l~sgs~Dg~I~v 147 (641)
++..+++++-++... +....+- .-.+-.-++..++....+..-+.-|.|.+
T Consensus 219 -----------------~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~l 281 (327)
T d1utca2 219 -----------------GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHL 281 (327)
T ss_dssp -----------------ETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEE
T ss_pred -----------------CCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecCcEEEE
Confidence 013467888887542 1112221 12455567899999899999999999999
Q ss_pred EECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEE
Q psy9327 148 WYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIR 188 (641)
Q Consensus 148 Wd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~ 188 (641)
+|+.++.++..-+-..+.|...+-+.+..-++....+|.|.
T Consensus 282 yDleTgt~i~~nRIs~~~iF~~a~~~~~~Gi~~VNr~GqVl 322 (327)
T d1utca2 282 YDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVL 322 (327)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTSEEE
T ss_pred EEcccccEEEEeecCCCceEEeccCCCCceEEEECCCCeEE
Confidence 99999999988877778888777777666777777777664
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=91.80 E-value=2.8 Score=40.20 Aligned_cols=96 Identities=7% Similarity=-0.051 Sum_probs=63.9
Q ss_pred eEEEEECCCCeeEE--EE-ccCCCCeEEEEEccCCCEEEEEeCC-CeEEEEECCCCeeEEEEcc-CCCCEEEEEEecCCC
Q psy9327 102 KIKVWNYKQRKCIF--TL-LGHLDYIRTTFFHHEYPWILSASDD-QTIRIWYWQSRNCICVLTG-HNHYVMCAQFHPTDD 176 (641)
Q Consensus 102 ~I~vWD~~t~~~~~--~~-~~h~~~V~~v~fsp~~~~l~sgs~D-g~I~vWd~~~~~~i~~l~~-h~~~V~sl~fsp~g~ 176 (641)
.+.+||..+++... .. ..|.....+.++.+++.+++.|+.+ .++.+||..+......-.. ....-.+++..++|.
T Consensus 53 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~ 132 (387)
T d1k3ia3 53 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR 132 (387)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC
T ss_pred EEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecCccCcccccccccccccccceeeecCCc
Confidence 47799999875432 22 2344444567889999999988765 6899999988764321111 111123566778999
Q ss_pred EEEEEeCC------CeEEEEecCCCce
Q psy9327 177 IVVSASLD------QTIRVWDISGLRK 197 (641)
Q Consensus 177 ~lvSgs~D------gtI~IWD~~~~~~ 197 (641)
.++.|+.+ ..+.+||..+.+-
T Consensus 133 v~v~GG~~~~~~~~~~v~~yd~~~~~W 159 (387)
T d1k3ia3 133 VFTIGGSWSGGVFEKNGEVYSPSSKTW 159 (387)
T ss_dssp EEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred eeeeccccccccccceeeeecCCCCce
Confidence 98888753 3689999987654
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=91.14 E-value=0.95 Score=47.16 Aligned_cols=58 Identities=3% Similarity=-0.025 Sum_probs=41.2
Q ss_pred CeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeec
Q psy9327 143 QTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 143 g~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~ 201 (641)
|.+.-||+.+++.+..... ..+..+-.+.-.+.+++.|+.||.++.+|..+++.+=..
T Consensus 438 G~l~A~D~~tGk~~W~~~~-~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~ 495 (560)
T d1kv9a2 438 GALLAWDPVKQKAAWKVPY-PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQF 495 (560)
T ss_dssp EEEEEEETTTTEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cceEEEeCCCCeEeeeccC-CCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEE
Confidence 5688899999988766542 222222223335788899999999999999998876443
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=90.77 E-value=1.1 Score=46.73 Aligned_cols=73 Identities=4% Similarity=-0.006 Sum_probs=51.5
Q ss_pred CeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC---CCCEEEEEEecCCC
Q psy9327 101 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH---NHYVMCAQFHPTDD 176 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h---~~~V~sl~fsp~g~ 176 (641)
|.+.-||..+|+.+....... +..+=..+-.+.+++.|+.|+.++.+|.++++.+..++-. .+.. +.|..+|+
T Consensus 457 G~l~AiD~~tGk~~W~~~~~~-p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P--~ty~~~Gk 532 (573)
T d1kb0a2 457 GRLLAWDPVAQKAAWSVEHVS-PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAP--STYMVDGR 532 (573)
T ss_dssp EEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC--EEEEETTE
T ss_pred ccEEEeCCCCCceEeeecCCC-CCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccC--EEEEECCE
Confidence 679999999999998876432 2221123346778888999999999999999999887522 1222 34555775
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.71 E-value=1.3 Score=46.24 Aligned_cols=58 Identities=10% Similarity=0.064 Sum_probs=42.1
Q ss_pred CeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeec
Q psy9327 143 QTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 143 g~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~ 201 (641)
|.+.-+|+.+++.+.....+ .++.+-..+..+.+++.|+.||.++.+|..+++.+=.+
T Consensus 466 G~l~AiD~~TG~i~W~~~~~-~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~ 523 (582)
T d1flga_ 466 GSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKF 523 (582)
T ss_dssp EEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CeEEEEcCCCCcEEeecCCC-CCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEE
Confidence 56888898998887766533 22222223446788889999999999999999876444
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=90.39 E-value=1.6 Score=45.42 Aligned_cols=58 Identities=9% Similarity=0.047 Sum_probs=40.4
Q ss_pred CeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeec
Q psy9327 143 QTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 143 g~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~ 201 (641)
|.+.-||..+++.+-..... .+..+-...-.+.+++.|+.||.++.+|.++++.+=.+
T Consensus 457 G~l~AiD~~tGk~~W~~~~~-~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~ 514 (573)
T d1kb0a2 457 GRLLAWDPVAQKAAWSVEHV-SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEA 514 (573)
T ss_dssp EEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ccEEEeCCCCCceEeeecCC-CCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEE
Confidence 35777888888877666432 22111122336888999999999999999998876444
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.52 E-value=6.7 Score=38.15 Aligned_cols=140 Identities=6% Similarity=0.031 Sum_probs=87.3
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccC---------cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN---------TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~---------~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
...+-++.++..-++++|+.++ ++|-....- ..-.+.+..-..|..++|+.+ .++..
T Consensus 37 ~~~~LLAVsn~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~~~ip~v~~vafs~d--~l~v~----------- 102 (381)
T d1xipa_ 37 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCFHGD--QVLVS----------- 102 (381)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEEETT--EEEEE-----------
T ss_pred cccceEEEeCCCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcceeccCCCCeEEEEeeCC--EEEEE-----------
Confidence 4677899999888888888776 667664211 001111112236888999755 44444
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~ 160 (641)
.++.+..++..+-........-..+++.+.++|. .++....++.+.++++..+.......
T Consensus 103 ------------------~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~ 162 (381)
T d1xipa_ 103 ------------------TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQ 162 (381)
T ss_dssp ------------------ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ------------------eCCCEEEEEeeccccccccccccccccceecCCc--eeEEEecCCCEEEEEeccCccccccC
Confidence 3566777777654333333334567888888775 46777778999999998875322211
Q ss_pred -----cCCCCEEEEEEecCCCEEEEEeC
Q psy9327 161 -----GHNHYVMCAQFHPTDDIVVSASL 183 (641)
Q Consensus 161 -----~h~~~V~sl~fsp~g~~lvSgs~ 183 (641)
.-.+.+.+++|++.|..++++..
T Consensus 163 ~v~~~~~~~~~~~v~ws~kgkq~v~~~g 190 (381)
T d1xipa_ 163 NVTSFDVTNSQLAVLLKDRSFQSFAWRN 190 (381)
T ss_dssp SEEEEEECSSEEEEEETTSCEEEEEEET
T ss_pred CcceEEecCCceEEEEeCCcEEEEEeCC
Confidence 01355777888777777766643
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=89.08 E-value=5.2 Score=41.55 Aligned_cols=79 Identities=6% Similarity=-0.047 Sum_probs=52.4
Q ss_pred CeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCC-CEEEEEEecCCC-EE
Q psy9327 101 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNH-YVMCAQFHPTDD-IV 178 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~-~V~sl~fsp~g~-~l 178 (641)
|.|.-||..+|+.+.... +..+..+-..+..+.+++.|+.|+.++.+|.++++.+..+.-... .-.-+.|..+|+ +|
T Consensus 453 G~l~A~D~~TG~~~W~~~-~~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P~tY~~dGkQYv 531 (596)
T d1w6sa_ 453 GQIKAYNAITGDYKWEKM-ERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYV 531 (596)
T ss_dssp EEEEEECTTTCCEEEEEE-ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred ceEEEEeCCCCceecccC-CCCCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCCeEEEECCEEEE
Confidence 689999999999887764 222222222334577888899999999999999999988752211 111134555775 34
Q ss_pred EE
Q psy9327 179 VS 180 (641)
Q Consensus 179 vS 180 (641)
+.
T Consensus 532 av 533 (596)
T d1w6sa_ 532 AI 533 (596)
T ss_dssp EE
T ss_pred EE
Confidence 43
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=87.90 E-value=13 Score=36.25 Aligned_cols=118 Identities=7% Similarity=0.018 Sum_probs=67.0
Q ss_pred CCCCeEEEEEccCCCeEEEEeC-C----CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 8 KSARVKGLSFHPKRPWILSSLH-N----GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~-d----g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
+.-.+.+.++||+++++|.+-. + .++++.|+.+|+.+..-- ......+++|++++..|+-....
T Consensus 123 ~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i-~~~~~~~~~W~~D~~~~~Y~~~~---------- 191 (430)
T d1qfma1 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-ERVKFSCMAWTHDGKGMFYNAYP---------- 191 (430)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-EEECSCCEEECTTSSEEEEEECC----------
T ss_pred ccceecceEecCCCCEEEEEeccccCchheeEEeccCcceeccccc-ccccccceEEcCCCCEEEEEEec----------
Confidence 3334567889999999885533 3 359999999998654221 11222568999999977654200
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCee--EEEEccCC--CCeEEEEEccCCCEEEE
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHL--DYIRTTFFHHEYPWILS 138 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~--~~~~~~h~--~~V~~v~fsp~~~~l~s 138 (641)
..... .............|..|.+.+... ...+.... ..+..+..++++.+++.
T Consensus 192 -~~~~~-~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i 249 (430)
T d1qfma1 192 -QQDGK-SDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLL 249 (430)
T ss_dssp -CCSSC-CSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEE
T ss_pred -cccCc-ccccccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeE
Confidence 00000 000000001234688888876532 33444433 34667788999998764
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=87.32 E-value=2.6 Score=41.81 Aligned_cols=117 Identities=15% Similarity=0.103 Sum_probs=72.3
Q ss_pred cccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEE-EEccCCCCeEEEE
Q psy9327 50 HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIF-TLLGHLDYIRTTF 128 (641)
Q Consensus 50 h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~-~~~~h~~~V~~v~ 128 (641)
+.-.+.+.++||++++++.+-+ ..|++-..+++.|+.+|+.+. .+.. .....++
T Consensus 123 ~~~~~~~~~~Spd~~~la~s~d-----------------------~~G~e~~~l~v~Dl~tg~~~~~~i~~--~~~~~~~ 177 (430)
T d1qfma1 123 GTVALRGYAFSEDGEYFAYGLS-----------------------ASGSDWVTIKFMKVDGAKELPDVLER--VKFSCMA 177 (430)
T ss_dssp SCEEEEEEEECTTSSEEEEEEE-----------------------ETTCSCEEEEEEETTTTEEEEEEEEE--ECSCCEE
T ss_pred ccceecceEecCCCCEEEEEec-----------------------cccCchheeEEeccCcceeccccccc--ccccceE
Confidence 3334567788999998886531 111345689999999998764 2321 1124688
Q ss_pred EccCCCEEEEEeCC----------------CeEEEEECCCCe--eEEEEcc--CCCCEEEEEEecCCCEEEEEeC---CC
Q psy9327 129 FHHEYPWILSASDD----------------QTIRIWYWQSRN--CICVLTG--HNHYVMCAQFHPTDDIVVSASL---DQ 185 (641)
Q Consensus 129 fsp~~~~l~sgs~D----------------g~I~vWd~~~~~--~i~~l~~--h~~~V~sl~fsp~g~~lvSgs~---Dg 185 (641)
|++++..|+-...| ..|..|.+.+.. ....+.. ....+..+..++++.+++.... ++
T Consensus 178 W~~D~~~~~Y~~~~~~~~~~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~ 257 (430)
T d1qfma1 178 WTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDP 257 (430)
T ss_dssp ECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSS
T ss_pred EcCCCCEEEEEEeccccCcccccccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCc
Confidence 99999977654332 258888877653 2333333 3345677788889988764322 33
Q ss_pred eEEEEe
Q psy9327 186 TIRVWD 191 (641)
Q Consensus 186 tI~IWD 191 (641)
...+|-
T Consensus 258 ~~~~~~ 263 (430)
T d1qfma1 258 VNRLWY 263 (430)
T ss_dssp CCEEEE
T ss_pred cEEEEE
Confidence 444553
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=86.54 E-value=8.3 Score=38.34 Aligned_cols=61 Identities=15% Similarity=0.219 Sum_probs=41.8
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccc--ccc------cccccCeEEEEEeCC---CCEEEEe
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLL--EKF------DEHEGPVRGICFHNQ---QPIFVSG 69 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l--~~~------~~h~~~V~~i~fsp~---~~~l~sg 69 (641)
-+.-.+|+|.|||+++++--.+|.|++++..+++.. ..+ ..-.+...+|+|||+ ..++..+
T Consensus 26 L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYvs 97 (450)
T d1crua_ 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (450)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred CCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCCCccCCEEEEE
Confidence 356779999999998777655799999987766431 111 112357789999995 4455443
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.55 E-value=4.2 Score=39.67 Aligned_cols=137 Identities=9% Similarity=0.031 Sum_probs=76.8
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
..|..++|+.+ .|+.. .++.+..++...-........-..++..+.++|.. ++...
T Consensus 87 p~v~~vafs~d--~l~v~-~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~--~~l~~------------------- 142 (381)
T d1xipa_ 87 PDVIFVCFHGD--QVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNT--LVILN------------------- 142 (381)
T ss_dssp TTEEEEEEETT--EEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSE--EEEEE-------------------
T ss_pred CCeEEEEeeCC--EEEEE-eCCCEEEEEeeccccccccccccccccceecCCce--eEEEe-------------------
Confidence 35889999755 35554 34567777765533333333345678888888764 33333
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEc-----cCCCCeEEEEEccCCCEEEEEeCCCeEEEE-ECCCCeeEEEEccCC
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLL-----GHLDYIRTTFFHHEYPWILSASDDQTIRIW-YWQSRNCICVLTGHN 163 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~-----~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vW-d~~~~~~i~~l~~h~ 163 (641)
.++.+.++++..++...... .-.+.+.+++|++.+..++++..+. ..+- ++.....+.......
T Consensus 143 ---------~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~kgkq~v~~~g~~-~q~k~~i~~~~~~~~p~~~~ 212 (381)
T d1xipa_ 143 ---------SVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGE-MEKQFEFSLPSELEELPVEE 212 (381)
T ss_dssp ---------TTSEEEEEETTTCCEEEEEESEEEEEECSSEEEEEETTSCEEEEEEETTE-EEEEEEECCCHHHHTSCTTT
T ss_pred ---------cCCCEEEEEeccCccccccCCcceEEecCCceEEEEeCCcEEEEEeCCCc-eeeccCCCCccccCCCcCCC
Confidence 67888999998875432211 1236678888888888887764332 1110 111110000001134
Q ss_pred CCEEEEEEecCCCEEEE
Q psy9327 164 HYVMCAQFHPTDDIVVS 180 (641)
Q Consensus 164 ~~V~sl~fsp~g~~lvS 180 (641)
..|.++.|-.+..++++
T Consensus 213 ~~v~sI~WL~~~~F~vv 229 (381)
T d1xipa_ 213 YSPLSVTILSPQDFLAV 229 (381)
T ss_dssp SEEEEEEESSSSEEEEE
T ss_pred cceeEEEEecCceEEEE
Confidence 46788888765555544
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=83.72 E-value=14 Score=35.31 Aligned_cols=144 Identities=6% Similarity=0.147 Sum_probs=88.0
Q ss_pred cCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeC----C--CCEEEEeceeeEEeeeceeeecccCCccee
Q psy9327 19 PKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN----Q--QPIFVSGGKMIVMAYQGCILESRNEPCLFR 92 (641)
Q Consensus 19 pdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp----~--~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~ 92 (641)
|+..+++....++-+.+||++ |+.+..+. .++++.|..-. + ..-+++++.
T Consensus 38 p~~SlI~gTdK~~Gl~vYdL~-G~~l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasn--------------------- 93 (353)
T d1h6la_ 38 PQNSKLITTNKKSGLAVYSLE-GKMLHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASN--------------------- 93 (353)
T ss_dssp GGGCEEEEEETTSCCEEEETT-CCEEEECC--SSCEEEEEEEEEEEETTEEEEEEEEEE---------------------
T ss_pred cCccEEEEEcCcCCEEEEcCC-CcEEEecc--cCCcCccccccccccCCcceEEEEEeC---------------------
Confidence 355677777777779999985 77776653 46777766542 1 222333331
Q ss_pred eEEEeeCC--CeEEEEECCC-CeeEEEEccC-------CCCeEEEEE--ccC-CC-EEEEEeCCCeEEEEECC---CC--
Q psy9327 93 IKSVLGDD--YKIKVWNYKQ-RKCIFTLLGH-------LDYIRTTFF--HHE-YP-WILSASDDQTIRIWYWQ---SR-- 153 (641)
Q Consensus 93 ~~~~~s~D--g~I~vWD~~t-~~~~~~~~~h-------~~~V~~v~f--sp~-~~-~l~sgs~Dg~I~vWd~~---~~-- 153 (641)
-.+ .+|.+|.+.. ...+..+... ...+.++|+ ++. +. +++....+|.+..|.+. .+
T Consensus 94 -----R~~~~~~l~~~~id~~~~~l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v 168 (353)
T d1h6la_ 94 -----RSEGKNTIEIYAIDGKNGTLQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYI 168 (353)
T ss_dssp -----CCTTTCEEEEEEEETTTTEEEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSE
T ss_pred -----CcCcceeEEEEEecCcccccccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCce
Confidence 022 3677787642 2233333321 124667776 554 44 56677788999888662 22
Q ss_pred --eeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEec
Q psy9327 154 --NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192 (641)
Q Consensus 154 --~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~ 192 (641)
+.++++. -...+..+.+.++...|+.+-++.-|..++.
T Consensus 169 ~~~lvr~f~-~~~q~EGCVvDde~~~LyisEE~~Giw~~~a 208 (353)
T d1h6la_ 169 SGKKVRAFK-MNSQTEGMAADDEYGSLYIAEEDEAIWKFSA 208 (353)
T ss_dssp EEEEEEEEE-CSSCEEEEEEETTTTEEEEEETTTEEEEEES
T ss_pred eeEeeeccC-CCCccceEEEeCCCCcEEEecCccceEEEEe
Confidence 3455554 3457889999998889998888765544444
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=83.09 E-value=27 Score=35.53 Aligned_cols=34 Identities=12% Similarity=0.041 Sum_probs=28.1
Q ss_pred EEcCcEEEEEeCCCCeEEEEeCCcchhhhHHHhc
Q psy9327 294 KIKGNQVYYLDRECSPHVLRIDPTEFKFKLALIN 327 (641)
Q Consensus 294 ~~~g~~v~~~~~dg~i~v~~~~~~~~~~k~~l~~ 327 (641)
...+..|+.++.||.+++++..+++...+..+..
T Consensus 494 stagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~ 527 (582)
T d1flga_ 494 ATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGS 527 (582)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred EEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCC
Confidence 3568899999999999999999999887665433
|