Psyllid ID: psy934

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140---
Protein Sequence
MKDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPCELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRKISTENRK
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccHHHHHHccccccEEcccccccccccEEccccccccEEEEcccccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccHHHccccHHEcccccEEcccEcccccccEEEccccccccEEEEEEEccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
MKDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALehnipcelfqdeayklsnedndfFFQEvacksdsfmgygpvvpdgygcsynpreATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVesrkistenrk
Flexible Loop (DISEMBL)
mkdkkkldlFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPCELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLsaignlvesrkistenrk
Low Complexity Region (SEG)
MkdkkkldlfdaaikkQTQIMTENIQGEGIDLHLLGLRQTALEHNIPCELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRKISTENRK
Disordered region (IsUnstruct)
********LFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPCELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLD*********************
Disordered Region (DISOPRED)
**DKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTA**************YKLSNEDNDFFFQEVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGN*************
Disordered Region (DISEMBL)
MKDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPCELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES*********
Disordered Region (DISPRO)
MKDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPCELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESR********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPCELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRKISTENRK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	143	2.2.26 [Sep-21-2011]
P07668	721	Choline O-acetyltransfera	yes	N/A	0.839	0.166	0.5	3e-30
P13222	641	Choline O-acetyltransfera	yes	N/A	0.888	0.198	0.437	3e-22
P28329	748	Choline O-acetyltransfera	no	N/A	0.937	0.179	0.405	4e-21
Q90YJ9	640	Choline O-acetyltransfera	yes	N/A	0.888	0.198	0.429	5e-21
P52826	627	Carnitine O-acetyltransfe	N/A	N/A	0.909	0.207	0.425	1e-20
Q03059	641	Choline O-acetyltransfera	yes	N/A	0.902	0.201	0.407	5e-20
Q704S8	626	Carnitine O-acetyltransfe	no	N/A	0.937	0.214	0.360	2e-19
P47934	626	Carnitine O-acetyltransfe	no	N/A	0.937	0.214	0.367	3e-19
P32738	640	Choline O-acetyltransfera	no	N/A	0.930	0.207	0.388	8e-19
B2ZGJ1	637	Choline O-acetyltransfera	no	N/A	0.958	0.215	0.404	1e-18

>sp|P07668|CLAT_DROME Choline O-acetyltransferase OS=Drosophila melanogaster GN=Cha PE=1 SV=3

 Score =  130 bits (326), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/134 (50%), Positives = 91/134 (67%), Gaps = 14/134 (10%)

Query: 8   DLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALE-----HNIPCELFQDEAYKLSNED 62
           +LF  A+ +QT++M +NI G GID+ LLGLR+ ++E     H    ELF+DE+Y +S   
Sbjct: 595 ELFRCAVARQTEVMVKNILGNGIDIPLLGLREASIEVTGEMH----ELFKDESYIISQ-- 648

Query: 63  NDFFFQ--EVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATS 120
             F     +VAC +DSFMGYGPV P GYGCSYNP    IVFCVSAF SC  TSA+++A S
Sbjct: 649 -CFLLSTSQVACSTDSFMGYGPVTPRGYGCSYNPHPEQIVFCVSAFYSCEDTSASRYAKS 707

Query: 121 LDESLSAIGNLVES 134
           L +SL  + +L+++
Sbjct: 708 LQDSLDIMRDLLQN 721

Catalyzes the reversible synthesis of acetylcholine (ACh) from acetyl CoA and choline at cholinergic synapses.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 6

>sp|P13222|CLAT_PIG Choline O-acetyltransferase OS=Sus scrofa GN=CHAT PE=1 SV=3

 Score =  103 bits (257), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 59/135 (43%), Positives = 78/135 (57%), Gaps = 8/135 (5%)

Query: 1   MKDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALE--HNIPCELFQDEAYKL 58
           M D +KL L   AI+ QTQ     I G  ID HLLGLR+ A E    +P E+F DE Y +
Sbjct: 484 MPDSEKLLLLKDAIRAQTQYTVMAITGMAIDNHLLGLRELAREVCKELP-EMFTDETYLM 542

Query: 59  SNEDNDFFFQ--EVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAK 116
           SN    F     +V    + F  YGPVVP+GYG  YNP+  +I+FC+S+F  C  TS+ K
Sbjct: 543 SNR---FVLSTSQVPTTMEMFCCYGPVVPNGYGACYNPQPESILFCISSFHGCKETSSTK 599

Query: 117 FATSLDESLSAIGNL 131
           FA +++ES   +  L
Sbjct: 600 FAKAVEESFIEMKGL 614

Catalyzes the reversible synthesis of acetylcholine (ACh) from acetyl CoA and choline at cholinergic synapses.

Sus scrofa (taxid: 9823)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 6

>sp|P28329|CLAT_HUMAN Choline O-acetyltransferase OS=Homo sapiens GN=CHAT PE=1 SV=4

 Score = 99.8 bits (247), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 87/148 (58%), Gaps = 14/148 (9%)

Query: 5   KKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQ--TALEHNIPCELFQDEAYKLSNED 62
           +KL L   AI+ QT      I G  ID HLL LR+   A+   +P E+F DE Y +SN  
Sbjct: 595 EKLLLLKDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELP-EMFMDETYLMSNR- 652

Query: 63  NDFFFQ--EVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATS 120
             F     +V   ++ F  YGPVVP+GYG  YNP+  TI+FC+S+F SC  TS++KFA +
Sbjct: 653 --FVLSTSQVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKA 710

Query: 121 LDESLSAIGNL------VESRKISTENR 142
           ++ESL  + +L       ES+ ++T+ +
Sbjct: 711 VEESLIDMRDLCSLLPPTESKPLATKEK 738

Catalyzes the reversible synthesis of acetylcholine (ACh) from acetyl CoA and choline at cholinergic synapses.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 6

>sp|Q90YJ9|CLAT_CHICK Choline O-acetyltransferase OS=Gallus gallus GN=CHAT PE=2 SV=1

 Score = 99.8 bits (247), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 58/135 (42%), Positives = 76/135 (56%), Gaps = 8/135 (5%)

Query: 1   MKDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEH--NIPCELFQDEAYKL 58
           + D +K+  F  AI  QT      I G  ID HLLGLR+ A EH   +P E+F DE Y  
Sbjct: 483 LSDSEKMQRFKDAIAAQTNYTILAITGMAIDNHLLGLREVAREHFKELP-EIFTDETYLT 541

Query: 59  SNEDNDFFFQ--EVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAK 116
           SN    F     +V    + F  YGPVVP+GYG  YNP+   I+FC+S+FK C  TS+  
Sbjct: 542 SNR---FILSTSQVPTPMEMFCCYGPVVPNGYGACYNPQPEHILFCISSFKDCKETSSDM 598

Query: 117 FATSLDESLSAIGNL 131
            A +++ESL  I +L
Sbjct: 599 LAKAVEESLLEIRDL 613

Catalyzes the reversible synthesis of acetylcholine (ACh) from acetyl CoA and choline at cholinergic synapses.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 6

>sp|P52826|CACP_COLLI Carnitine O-acetyltransferase OS=Columba livia GN=CRAT PE=1 SV=1

 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/134 (42%), Positives = 79/134 (58%), Gaps = 4/134 (2%)

Query: 3   DKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEH--NIPCELFQDEAYKLSN 60
           D++K DL   A +   +     IQG  ID HLLGL+  A+E   +IP ELF D AY ++ 
Sbjct: 490 DQEKADLLRRATQAHKEYTNMAIQGNAIDRHLLGLKLQAIEDLVSIP-ELFMDTAYAVAM 548

Query: 61  EDNDFFFQEVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATS 120
             N     +V  K+D  M +GPVVPDGYG  YNP    I F +SAF SC  T+AA+ A  
Sbjct: 549 HFN-LSTSQVPAKTDCVMCFGPVVPDGYGICYNPMGEHINFAISAFNSCADTNAARMAHY 607

Query: 121 LDESLSAIGNLVES 134
           L+++L  + +L++S
Sbjct: 608 LEKALLDMRSLLQS 621

Carnitine acetylase is specific for short chain fatty acids. Carnitine acetylase seems to affect the flux through the pyruvate dehydrogenase complex. It may be involved as well in the transport of acetyl-CoA out of the mitochondria for fatty acid biosynthesis or urinary excretion.

Columba livia (taxid: 8932)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

>sp|Q03059|CLAT_MOUSE Choline O-acetyltransferase OS=Mus musculus GN=Chat PE=2 SV=2

 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 55/135 (40%), Positives = 74/135 (54%), Gaps = 6/135 (4%)

Query: 5   KKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEH-NIPCELFQDEAYKLSNEDN 63
           +KL L   AI+ QT+     I G  ID HLL LR+ A +    P E+F DE Y +SN   
Sbjct: 488 EKLQLLQRAIQAQTEYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNR-- 545

Query: 64  DFFFQ--EVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSL 121
            F     +V    + F  YGPVVP+GYG  YNP    I FC+S+F  C  TS+ +FA ++
Sbjct: 546 -FILSTSQVPTTMEMFCCYGPVVPNGYGACYNPHAEAITFCISSFHGCKETSSVEFAEAV 604

Query: 122 DESLSAIGNLVESRK 136
             SL  + +L  SR+
Sbjct: 605 GASLVDMRDLCSSRQ 619

Catalyzes the reversible synthesis of acetylcholine (ACh) from acetyl CoA and choline at cholinergic synapses.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 6

>sp|Q704S8|CACP_RAT Carnitine O-acetyltransferase OS=Rattus norvegicus GN=Crat PE=1 SV=1

 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 80/136 (58%), Gaps = 2/136 (1%)

Query: 1   MKDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLS 59
           + ++++++L   A++         I+GE  D HLLGL+  A+E  +   ++F D +Y ++
Sbjct: 487 VPEQQRVELLRKAVQAHRAYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIA 546

Query: 60  NEDNDFFFQEVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFAT 119
              N     +V  K+D  M +GPVVPDGYG  YNP EA I F VSA+ SC  T+AA+ A 
Sbjct: 547 MHFN-LSTSQVPAKTDCVMSFGPVVPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAH 605

Query: 120 SLDESLSAIGNLVESR 135
            L+++L  +  L+++ 
Sbjct: 606 YLEKALLDMRTLLQNH 621

Carnitine acetylase is specific for short chain fatty acids. Carnitine acetylase seems to affect the flux through the pyruvate dehydrogenase complex. It may be involved as well in the transport of acetyl-CoA into mitochondria.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

>sp|P47934|CACP_MOUSE Carnitine O-acetyltransferase OS=Mus musculus GN=Crat PE=1 SV=3

 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 80/136 (58%), Gaps = 2/136 (1%)

Query: 1   MKDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLS 59
           + +++K++L   A++         I+GE  D HLLGL+  A+E  +   ++F D +Y ++
Sbjct: 487 VPEQQKVELLRKAVQAHRAYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIA 546

Query: 60  NEDNDFFFQEVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFAT 119
              N     +V  K+D  M +GPVVPDGYG  YNP EA I F VSA+ SC  T+AA+ A 
Sbjct: 547 MHFN-LSTSQVPAKTDCVMFFGPVVPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAH 605

Query: 120 SLDESLSAIGNLVESR 135
            L+++L  +  L+++ 
Sbjct: 606 YLEKALLDMRTLLQNH 621

Carnitine acetylase is specific for short chain fatty acids. Carnitine acetylase seems to affect the flux through the pyruvate dehydrogenase complex. It may be involved as well in the transport of acetyl-CoA into mitochondria.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

>sp|P32738|CLAT_RAT Choline O-acetyltransferase OS=Rattus norvegicus GN=Chat PE=1 SV=2

 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 74/139 (53%), Gaps = 6/139 (4%)

Query: 1   MKDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEH-NIPCELFQDEAYKLS 59
           M   +KL L   A++   Q     I G  ID HLL LR+ A +    P E+F DE Y +S
Sbjct: 483 MPASEKLQLLQTAMQAHKQYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMS 542

Query: 60  NEDNDFFFQ--EVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKF 117
           N    F     +V    + F  YGPVVP+G G  YNP+   I FC+S+F SC  TS+ +F
Sbjct: 543 NR---FVLSTSQVPTTMEMFCCYGPVVPNGNGACYNPQPEAITFCISSFHSCKETSSVEF 599

Query: 118 ATSLDESLSAIGNLVESRK 136
           A ++  SL  + +L  SR+
Sbjct: 600 AEAVGASLVDMRDLCSSRQ 618

Catalyzes the reversible synthesis of acetylcholine (ACh) from acetyl CoA and choline at cholinergic synapses.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 6

>sp|B2ZGJ1|CLAT_DANRE Choline O-acetyltransferase OS=Danio rerio GN=chat PE=2 SV=1

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 76/141 (53%), Gaps = 4/141 (2%)

Query: 1   MKDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNI-PCELFQDEAYKLS 59
           + D +K++L   AIK QT      I G  ID HLLGLR+ A E  +   ELF D  Y  S
Sbjct: 477 ITDAEKMELLWTAIKAQTNYTILAITGMAIDNHLLGLREIAKELKLEKPELFSDTTYATS 536

Query: 60  NEDNDFFFQEVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFAT 119
                    +V    + F  YGPVVP+GYG  YNP+   I+FCVS+F+ C  TS+  F  
Sbjct: 537 IHFT-LSTSQVPTTEEMFCCYGPVVPNGYGACYNPQTDHILFCVSSFRECAETSSDLFVK 595

Query: 120 SLDESLSAIGNLVESRKISTE 140
           +L+  L  + +L   RK +TE
Sbjct: 596 TLEGCLKEMQDLC--RKCNTE 614

Catalyzes the reversible synthesis of acetylcholine (ACh) from acetyl CoA and choline at cholinergic synapses.

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	143
242023368	650	Choline O-acetyltransferase, putative [P	0.951	0.209	0.543	1e-35
328723269	777	PREDICTED: choline O-acetyltransferase-l	0.930	0.171	0.485	8e-32
91077002	702	PREDICTED: similar to choline o-acyltran	0.895	0.182	0.507	6e-30
195399640	647	GJ14408 [Drosophila virilis] gi|19414198	0.867	0.191	0.507	3e-29
195343218	770	GM17887 [Drosophila sechellia] gi|194133	0.839	0.155	0.507	3e-29
390177768	722	GA11570 [Drosophila pseudoobscura pseudo	0.867	0.171	0.515	5e-29
194742317	832	GF17123 [Drosophila ananassae] gi|190626	0.839	0.144	0.507	5e-29
195450925	723	GK13739 [Drosophila willistoni] gi|19416	0.867	0.171	0.515	6e-29
195497744	721	GE25557 [Drosophila yakuba] gi|194182330	0.839	0.166	0.5	8e-29
195053932	749	GH18641 [Drosophila grimshawi] gi|193895	0.839	0.160	0.5	1e-28

>gi|242023368|ref|XP_002432106.1| Choline O-acetyltransferase, putative [Pediculus humanus corporis] gi|212517480|gb|EEB19368.1| Choline O-acetyltransferase, putative [Pediculus humanus corporis]

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 75/138 (54%), Positives = 100/138 (72%), Gaps = 2/138 (1%)

Query: 1   MKDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEH-NIPCELFQDEAYKLS 59
           + DKKKL+LFDAA+K+Q +IM +NI G+GID+HLLG+R+ ALE      E+F DE Y ++
Sbjct: 511 LDDKKKLELFDAAMKRQGEIMLDNILGKGIDIHLLGIREMALESMGTKPEMFDDETYAIA 570

Query: 60  NEDNDFFFQEVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFAT 119
           N        ++A K + FMGYGPVVPDGYG SYNPR   I+FC+SAF SC  TSA +FA 
Sbjct: 571 NHFG-LSTSQLATKLNMFMGYGPVVPDGYGASYNPRNDQIIFCISAFHSCAKTSAWRFAR 629

Query: 120 SLDESLSAIGNLVESRKI 137
           SL++SL ++  L+ SR+I
Sbjct: 630 SLEQSLDSMQKLMNSREI 647

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328723269|ref|XP_001946601.2| PREDICTED: choline O-acetyltransferase-like [Acyrthosiphon pisum]

 Score =  141 bits (356), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 65/134 (48%), Positives = 95/134 (70%), Gaps = 1/134 (0%)

Query: 3   DKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPCELFQDEAYKLSNED 62
           D +KL LF+ A+KKQT IM +NI G GID HLLGLRQ A E+ I C +F+D++++++N  
Sbjct: 644 DNEKLQLFETAVKKQTDIMIDNILGMGIDSHLLGLRQAARENAISCPVFEDDSFRIANHF 703

Query: 63  NDFFFQEVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLD 122
           +     ++   +DSFMGYGPVVPDGYG SYNP+  ++VFCVS+FKS  TT+   F  +L+
Sbjct: 704 S-LSTSQLLTSTDSFMGYGPVVPDGYGVSYNPQSNSLVFCVSSFKSSKTTNNNAFTVALE 762

Query: 123 ESLSAIGNLVESRK 136
           +SL  +  ++  ++
Sbjct: 763 QSLMTMQKMIYMKR 776

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91077002|ref|XP_975503.1| PREDICTED: similar to choline o-acyltransferase [Tribolium castaneum] gi|270002009|gb|EEZ98456.1| hypothetical protein TcasGA2_TC000946 [Tribolium castaneum]

 Score =  135 bits (340), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 71/140 (50%), Positives = 95/140 (67%), Gaps = 12/140 (8%)

Query: 1   MKDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALE------HNIPCELFQDE 54
           + D++KL L+  AIK+QT  M +NI G+GID+HLLGLR+ A E      H +P ++F D 
Sbjct: 562 VSDEEKLRLWKEAIKRQTTEMVDNILGQGIDIHLLGLREAARETSPTAAHPLP-DIFTDY 620

Query: 55  AYKLSNEDNDFFFQ--EVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTT 112
            YKL+N+   F     +VA  +DSFMGYGPV PDGYG SYNP+   I+FC+SAF S   T
Sbjct: 621 TYKLANK---FLLSTSQVATSTDSFMGYGPVEPDGYGASYNPKPDHIIFCLSAFWSSEVT 677

Query: 113 SAAKFATSLDESLSAIGNLV 132
           S ++FA SLDESL+ +  L+
Sbjct: 678 STSRFAQSLDESLNLMQALL 697

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195399640|ref|XP_002058427.1| GJ14408 [Drosophila virilis] gi|194141987|gb|EDW58395.1| GJ14408 [Drosophila virilis]

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 66/130 (50%), Positives = 90/130 (69%), Gaps = 6/130 (4%)

Query: 8   DLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFF 66
           +LF  A+ +QT++M  NI G GID+ LLGLR+ ++E      ELF DE+YK+S     F 
Sbjct: 521 ELFRCAVARQTEVMVRNILGNGIDIPLLGLREASVEVTGELHELFTDESYKISQ---CFL 577

Query: 67  FQ--EVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDES 124
               +VAC +DSFMGYGPV P GYGCSYNP+   IVFCVSAF +C  TSA+++A SL +S
Sbjct: 578 LSTSQVACSTDSFMGYGPVTPRGYGCSYNPQPEQIVFCVSAFYACEDTSASRYAKSLQDS 637

Query: 125 LSAIGNLVES 134
           L  + +L+++
Sbjct: 638 LDIMRDLLQN 647

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195343218|ref|XP_002038195.1| GM17887 [Drosophila sechellia] gi|194133045|gb|EDW54613.1| GM17887 [Drosophila sechellia]

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 68/134 (50%), Positives = 91/134 (67%), Gaps = 14/134 (10%)

Query: 8   DLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALE-----HNIPCELFQDEAYKLSNED 62
           +LF  A+ +QT++M +NI G GID+ LLGLR+ ++E     H    ELF+DE+Y +S   
Sbjct: 644 ELFRCAVARQTEVMVKNILGNGIDIPLLGLREASIEVTGEMH----ELFKDESYNISQ-- 697

Query: 63  NDFFFQ--EVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATS 120
             F     +VAC +DSFMGYGPV P GYGCSYNP    IVFCVSAF SC  TSA+++A S
Sbjct: 698 -CFLLSTSQVACSTDSFMGYGPVTPRGYGCSYNPHPEQIVFCVSAFYSCEDTSASRYAKS 756

Query: 121 LDESLSAIGNLVES 134
           L +SL  + NL+++
Sbjct: 757 LQDSLDIMRNLLQN 770

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390177768|ref|XP_001358450.3| GA11570 [Drosophila pseudoobscura pseudoobscura] gi|388859188|gb|EAL27589.3| GA11570 [Drosophila pseudoobscura pseudoobscura]

 Score =  132 bits (332), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 67/130 (51%), Positives = 91/130 (70%), Gaps = 6/130 (4%)

Query: 8   DLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFF 66
           +LF  A+ +QT++M +NI G GID+ LLGLR+ ++E      ELF DE+YK+S     F 
Sbjct: 596 ELFRCAVARQTEVMVKNILGSGIDIPLLGLREASVEVTGELHELFTDESYKISQ---CFL 652

Query: 67  FQ--EVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDES 124
               +VAC +DSFMGYGPV P GYGCSYNP+   IVFCVSAF SC  TSA+++A SL +S
Sbjct: 653 LSTSQVACSTDSFMGYGPVTPRGYGCSYNPQPEQIVFCVSAFYSCEDTSASRYAKSLQDS 712

Query: 125 LSAIGNLVES 134
           L  + +L+++
Sbjct: 713 LDIMRDLLQN 722

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194742317|ref|XP_001953649.1| GF17123 [Drosophila ananassae] gi|190626686|gb|EDV42210.1| GF17123 [Drosophila ananassae]

 Score =  132 bits (332), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 68/134 (50%), Positives = 92/134 (68%), Gaps = 14/134 (10%)

Query: 8   DLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALE-----HNIPCELFQDEAYKLSNED 62
           +LF  A+ +QT++M +NI G GID+ LLGLR+ ++E     H    ELF DE+YK+S   
Sbjct: 706 ELFRCAVARQTEVMVKNILGSGIDIPLLGLREASVEVTGEMH----ELFTDESYKISQ-- 759

Query: 63  NDFFFQ--EVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATS 120
             F     +VAC +DSFMGYGPV P GYGCSYNP+   IVFCVSAF SC  TSA+++A S
Sbjct: 760 -CFLLSTSQVACSTDSFMGYGPVTPRGYGCSYNPQPEQIVFCVSAFYSCEDTSASRYAKS 818

Query: 121 LDESLSAIGNLVES 134
           L +SL  + +L+++
Sbjct: 819 LQDSLDIMRDLLQN 832

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195450925|ref|XP_002072692.1| GK13739 [Drosophila willistoni] gi|194168777|gb|EDW83678.1| GK13739 [Drosophila willistoni]

 Score =  132 bits (331), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 67/130 (51%), Positives = 90/130 (69%), Gaps = 6/130 (4%)

Query: 8   DLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFF 66
           +LF  A+ +QT++M +NI G GID+ LLGLR+ +LE N    ELF DE YK+S     F 
Sbjct: 597 ELFRCAVARQTEVMVKNILGNGIDIPLLGLREASLEVNGEMHELFTDETYKISQ---CFL 653

Query: 67  FQ--EVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDES 124
               +VAC ++SFMGYGPV P GYGCSYNP+   I+FCVSAF +C  TSA++FA SL  S
Sbjct: 654 LSTSQVACTTNSFMGYGPVTPRGYGCSYNPQPERIIFCVSAFYNCEDTSASRFAKSLQNS 713

Query: 125 LSAIGNLVES 134
           L  + +L+++
Sbjct: 714 LDIMRDLLQN 723

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195497744|ref|XP_002096229.1| GE25557 [Drosophila yakuba] gi|194182330|gb|EDW95941.1| GE25557 [Drosophila yakuba]

 Score =  131 bits (330), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 67/134 (50%), Positives = 92/134 (68%), Gaps = 14/134 (10%)

Query: 8   DLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALE-----HNIPCELFQDEAYKLSNED 62
           +LF  A+ +QT++M +NI G GID+ LLGLR+ ++E     H    ELF+DE+Y +S   
Sbjct: 595 ELFRCAVARQTEVMVKNILGNGIDIPLLGLREASIEVTGEMH----ELFRDESYNISQ-- 648

Query: 63  NDFFFQ--EVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATS 120
             F     +VAC +DSFMGYGPV P GYGCSYNP+   IVFCVSAF SC  TSA+++A S
Sbjct: 649 -CFLLSTSQVACSTDSFMGYGPVTPRGYGCSYNPQPEQIVFCVSAFYSCEDTSASRYAKS 707

Query: 121 LDESLSAIGNLVES 134
           L +SL  + +L+++
Sbjct: 708 LQDSLDIMRDLLQN 721

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195053932|ref|XP_001993880.1| GH18641 [Drosophila grimshawi] gi|193895750|gb|EDV94616.1| GH18641 [Drosophila grimshawi]

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/134 (50%), Positives = 92/134 (68%), Gaps = 14/134 (10%)

Query: 8   DLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALE-----HNIPCELFQDEAYKLSNED 62
           +LF  A+ +QT++M +NI G GID+ LLGLR+ ++E     H    ELF DE+YK+S   
Sbjct: 623 ELFRCAVARQTEVMVKNILGSGIDIPLLGLREASVEVTGELH----ELFTDESYKISQ-- 676

Query: 63  NDFFFQ--EVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATS 120
             F     +VAC +DSFMGYGPV P GYGCSYNP+   IVFCVSAF +C  TSA+++A S
Sbjct: 677 -CFLLSTSQVACSTDSFMGYGPVTPRGYGCSYNPQPEQIVFCVSAFYACEDTSASRYAKS 735

Query: 121 LDESLSAIGNLVES 134
           L +SL  + +L+++
Sbjct: 736 LQDSLDIMHDLLQN 749

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	143
FB|FBgn0000303	721	Cha "Choline acetyltransferase	0.804	0.159	0.520	5.3e-26
FB|FBgn0037440	662	CG1041 [Drosophila melanogaste	0.818	0.176	0.394	5.8e-19
FB|FBgn0032471	1266	CG5122 [Drosophila melanogaste	0.790	0.089	0.391	4.3e-18
UNIPROTKB|F1MLQ5	637	CHAT "Uncharacterized protein"	0.748	0.167	0.450	5e-18
UNIPROTKB|F1P393	640	CHAT "Choline O-acetyltransfer	0.832	0.185	0.433	6.5e-18
UNIPROTKB|Q90YJ9	640	CHAT "Choline O-acetyltransfer	0.832	0.185	0.433	6.5e-18
UNIPROTKB|P13222	641	CHAT "Choline O-acetyltransfer	0.741	0.165	0.454	8.3e-18
UNIPROTKB|P28329	748	CHAT "Choline O-acetyltransfer	0.867	0.165	0.402	8.6e-18
RGD|1303031	626	Crat "carnitine O-acetyltransf	0.762	0.174	0.423	3.5e-17
UNIPROTKB|J9NRK1	642	CHAT "Uncharacterized protein"	0.776	0.172	0.420	3.7e-17

FB|FBgn0000303 Cha "Choline acetyltransferase" [Drosophila melanogaster (taxid:7227)]

 Score = 303 (111.7 bits), Expect = 5.3e-26, P = 5.3e-26
 Identities = 63/121 (52%), Positives = 84/121 (69%)

Query:    17 QTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQ--EVACK 73
             QT++M +NI G GID+ LLGLR+ ++E      ELF+DE+Y +S     F     +VAC 
Sbjct:   604 QTEVMVKNILGNGIDIPLLGLREASIEVTGEMHELFKDESYIISQ---CFLLSTSQVACS 660

Query:    74 SDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVE 133
             +DSFMGYGPV P GYGCSYNP    IVFCVSAF SC  TSA+++A SL +SL  + +L++
Sbjct:   661 TDSFMGYGPVTPRGYGCSYNPHPEQIVFCVSAFYSCEDTSASRYAKSLQDSLDIMRDLLQ 720

Query:   134 S 134
             +
Sbjct:   721 N 721

GO:0004102 "choline O-acetyltransferase activity" evidence=ISS;IDA

GO:0008292 "acetylcholine biosynthetic process" evidence=NAS

GO:0007274 "neuromuscular synaptic transmission" evidence=IMP

FB|FBgn0037440 CG1041 [Drosophila melanogaster (taxid:7227)]

 Score = 237 (88.5 bits), Expect = 5.8e-19, P = 5.8e-19
 Identities = 47/119 (39%), Positives = 71/119 (59%)

Query:    25 IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPV 83
             +QG+G+D HLLGL+  ALEH+ P  E F+   +  S+        +VA K D+FMGYGP 
Sbjct:   544 LQGKGVDRHLLGLKLMALEHSKPIPEFFKSPGFVKSSHFR-MSTSQVATKYDAFMGYGPA 602

Query:    84 VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRKISTENR 142
               DGY C YNPR+  I+  +SA++ C  T   KF  +L++S   + N++E     T+++
Sbjct:   603 TDDGYACCYNPRDNDIILAISAWRHCPITDHLKFVKTLEQSFFEMKNVLEKNPPETKSK 661

GO:0005739 "mitochondrion" evidence=ISS

GO:0005777 "peroxisome" evidence=ISS

GO:0004092 "carnitine O-acetyltransferase activity" evidence=ISS

FB|FBgn0032471 CG5122 [Drosophila melanogaster (taxid:7227)]

 Score = 233 (87.1 bits), Expect = 4.3e-18, P = 4.3e-18
 Identities = 45/115 (39%), Positives = 73/115 (63%)

Query:    19 QIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSDSF 77
             +++ E I G+GID HL GL++ ALE  +P  E F+ + Y + +     F  +VA  ++ F
Sbjct:  1133 KLIKEAINGQGIDRHLFGLQEMALEKGMPIPEFFRSKGY-VRSVTFQLFTSQVATSNEGF 1191

Query:    78 MGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLV 132
             M YGP++ DGYG  YNP+E+ I F +SA+KSC   +  +FA ++ +SL+ +  L+
Sbjct:  1192 MAYGPLLSDGYGVCYNPKESKITFAISAWKSCKEINTIRFAKAIKKSLNDMRKLI 1246

GO:0004092 "carnitine O-acetyltransferase activity" evidence=ISS

UNIPROTKB|F1MLQ5 CHAT "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 228 (85.3 bits), Expect = 5.0e-18, P = 5.0e-18
 Identities = 50/111 (45%), Positives = 68/111 (61%)

Query:    17 QTQIMTENIQGEGIDLHLLGLRQTALE--HNIPCELFQDEAYKLSNEDNDFFFQEVACKS 74
             QT+     I G  ID HLLGLR+ A E    +P E+F DE Y +SN        +V    
Sbjct:   496 QTEYTVMAITGMAIDNHLLGLRELAREMCKELP-EMFTDETYLMSNRFV-LSTSQVPTTM 553

Query:    75 DSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESL 125
             + F  YGPVVP+GYG  YNP+  +I+FC+S+F +C  TS+ KFA +++ESL
Sbjct:   554 EMFCCYGPVVPNGYGACYNPQPESILFCISSFHNCKETSSTKFAKAVEESL 604

GO:0043179 "rhythmic excitation" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0007628 "adult walking behavior" evidence=IEA

GO:0007622 "rhythmic behavior" evidence=IEA

GO:0007529 "establishment of synaptic specificity at neuromuscular junction" evidence=IEA

GO:0007274 "neuromuscular synaptic transmission" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0004102 "choline O-acetyltransferase activity" evidence=IEA

UNIPROTKB|F1P393 CHAT "Choline O-acetyltransferase" [Gallus gallus (taxid:9031)]

 Score = 227 (85.0 bits), Expect = 6.5e-18, P = 6.5e-18
 Identities = 55/127 (43%), Positives = 70/127 (55%)

Query:    17 QTQIMTENIQGEGIDLHLLGLRQTALEH--NIPCELFQDEAYKLSNEDNDFFFQ--EVAC 72
             QT      I G  ID HLLGLR+ A EH   +P E+F DE Y  SN    F     +V  
Sbjct:   499 QTNYTILAITGMAIDNHLLGLREVAREHFKELP-EIFTDETYLTSNR---FILSTSQVPT 554

Query:    73 KSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLV 132
               + F  YGPVVP+GYG  YNP+   I+FC+S+FK C  TS+   A +++ESL  I +L 
Sbjct:   555 TMEMFCCYGPVVPNGYGACYNPQPEHILFCISSFKDCKETSSDMLAKAVEESLLEIRDLC 614

Query:   133 ESRKIST 139
                  ST
Sbjct:   615 NKCSSST 621

GO:0004102 "choline O-acetyltransferase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0007274 "neuromuscular synaptic transmission" evidence=IEA

GO:0007529 "establishment of synaptic specificity at neuromuscular junction" evidence=IEA

GO:0007622 "rhythmic behavior" evidence=IEA

GO:0007628 "adult walking behavior" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0043179 "rhythmic excitation" evidence=IEA

UNIPROTKB|Q90YJ9 CHAT "Choline O-acetyltransferase" [Gallus gallus (taxid:9031)]

 Score = 227 (85.0 bits), Expect = 6.5e-18, P = 6.5e-18
 Identities = 55/127 (43%), Positives = 70/127 (55%)

Query:    17 QTQIMTENIQGEGIDLHLLGLRQTALEH--NIPCELFQDEAYKLSNEDNDFFFQ--EVAC 72
             QT      I G  ID HLLGLR+ A EH   +P E+F DE Y  SN    F     +V  
Sbjct:   499 QTNYTILAITGMAIDNHLLGLREVAREHFKELP-EIFTDETYLTSNR---FILSTSQVPT 554

Query:    73 KSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLV 132
               + F  YGPVVP+GYG  YNP+   I+FC+S+FK C  TS+   A +++ESL  I +L 
Sbjct:   555 PMEMFCCYGPVVPNGYGACYNPQPEHILFCISSFKDCKETSSDMLAKAVEESLLEIRDLC 614

Query:   133 ESRKIST 139
                  ST
Sbjct:   615 NKCSSST 621

GO:0004102 "choline O-acetyltransferase activity" evidence=IEA

GO:0042136 "neurotransmitter biosynthetic process" evidence=IEA

UNIPROTKB|P13222 CHAT "Choline O-acetyltransferase" [Sus scrofa (taxid:9823)]

 Score = 226 (84.6 bits), Expect = 8.3e-18, P = 8.3e-18
 Identities = 50/110 (45%), Positives = 66/110 (60%)

Query:    17 QTQIMTENIQGEGIDLHLLGLRQTALE--HNIPCELFQDEAYKLSNEDNDFFFQEVACKS 74
             QTQ     I G  ID HLLGLR+ A E    +P E+F DE Y +SN        +V    
Sbjct:   500 QTQYTVMAITGMAIDNHLLGLRELAREVCKELP-EMFTDETYLMSNRFV-LSTSQVPTTM 557

Query:    75 DSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDES 124
             + F  YGPVVP+GYG  YNP+  +I+FC+S+F  C  TS+ KFA +++ES
Sbjct:   558 EMFCCYGPVVPNGYGACYNPQPESILFCISSFHGCKETSSTKFAKAVEES 607

GO:0043179 "rhythmic excitation" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0007628 "adult walking behavior" evidence=IEA

GO:0007622 "rhythmic behavior" evidence=IEA

GO:0007529 "establishment of synaptic specificity at neuromuscular junction" evidence=IEA

GO:0007274 "neuromuscular synaptic transmission" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0004102 "choline O-acetyltransferase activity" evidence=IEA

GO:0042136 "neurotransmitter biosynthetic process" evidence=IEA

UNIPROTKB|P28329 CHAT "Choline O-acetyltransferase" [Homo sapiens (taxid:9606)]

 Score = 227 (85.0 bits), Expect = 8.6e-18, P = 8.6e-18
 Identities = 54/134 (40%), Positives = 79/134 (58%)

Query:    17 QTQIMTENIQGEGIDLHLLGLRQTA--LEHNIPCELFQDEAYKLSNEDNDFFFQEVACKS 74
             QT      I G  ID HLL LR+ A  +   +P E+F DE Y +SN        +V   +
Sbjct:   607 QTAYTVMAITGMAIDNHLLALRELARAMCKELP-EMFMDETYLMSNRFV-LSTSQVPTTT 664

Query:    75 DSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNL--- 131
             + F  YGPVVP+GYG  YNP+  TI+FC+S+F SC  TS++KFA +++ESL  + +L   
Sbjct:   665 EMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCKETSSSKFAKAVEESLIDMRDLCSL 724

Query:   132 ---VESRKISTENR 142
                 ES+ ++T+ +
Sbjct:   725 LPPTESKPLATKEK 738

GO:0042136 "neurotransmitter biosynthetic process" evidence=IEA

GO:0004102 "choline O-acetyltransferase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0007274 "neuromuscular synaptic transmission" evidence=IEA

GO:0007529 "establishment of synaptic specificity at neuromuscular junction" evidence=IEA

GO:0007622 "rhythmic behavior" evidence=IEA

GO:0007628 "adult walking behavior" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0043179 "rhythmic excitation" evidence=IEA

GO:0005737 "cytoplasm" evidence=TAS

GO:0005634 "nucleus" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006644 "phospholipid metabolic process" evidence=TAS

GO:0006656 "phosphatidylcholine biosynthetic process" evidence=TAS

GO:0007268 "synaptic transmission" evidence=TAS

GO:0007269 "neurotransmitter secretion" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0046474 "glycerophospholipid biosynthetic process" evidence=TAS

RGD|1303031 Crat "carnitine O-acetyltransferase" [Rattus norvegicus (taxid:10116)]

 Score = 220 (82.5 bits), Expect = 3.5e-17, P = 3.5e-17
 Identities = 47/111 (42%), Positives = 69/111 (62%)

Query:    25 IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPV 83
             I+GE  D HLLGL+  A+E  +   ++F D +Y ++   N     +V  K+D  M +GPV
Sbjct:   511 IRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFN-LSTSQVPAKTDCVMSFGPV 569

Query:    84 VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 134
             VPDGYG  YNP EA I F VSA+ SC  T+AA+ A  L+++L  +  L+++
Sbjct:   570 VPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQN 620

GO:0004092 "carnitine O-acetyltransferase activity" evidence=ISO;IDA

GO:0005102 "receptor binding" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;TAS

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0005777 "peroxisome" evidence=ISO;TAS

GO:0005783 "endoplasmic reticulum" evidence=TAS

GO:0006631 "fatty acid metabolic process" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0019254 "carnitine metabolic process, CoA-linked" evidence=ISO

UNIPROTKB|J9NRK1 CHAT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 220 (82.5 bits), Expect = 3.7e-17, P = 3.7e-17
 Identities = 50/119 (42%), Positives = 70/119 (58%)

Query:    17 QTQIMTENIQGEGIDLHLLGLRQTALE--HNIPCELFQDEAYKLSNEDNDFFFQ--EVAC 72
             QT+     I G  ID HLL LR+ A +    +P E+F DE Y +SN    F     +V  
Sbjct:   501 QTEYTVMAITGMAIDNHLLALRELARDTCKELP-EMFTDETYLMSNR---FILSTSQVPT 556

Query:    73 KSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNL 131
               + F  YGPVVP+GYG  YNP+  +I+FC+S+F  C  TS+ KFA +++ESL  + +L
Sbjct:   557 TMEMFCCYGPVVPNGYGACYNPQPESILFCISSFHGCKDTSSTKFAKAVEESLIEMRDL 615

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	143
pfam00755	590	pfam00755, Carn_acyltransf, Choline/Carnitine o-ac	5e-35

>gnl|CDD|216101 pfam00755, Carn_acyltransf, Choline/Carnitine o-acyltransferase

 Score =  127 bits (320), Expect = 5e-35
 Identities = 48/124 (38%), Positives = 66/124 (53%), Gaps = 2/124 (1%)

Query: 3   DKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNE 61
            ++K  L   A KK  +   E + G+GID HL GL+  A E  +   ELF D ++ LS  
Sbjct: 463 KEEKRQLLKKACKKHVKYTKEAMTGKGIDRHLFGLKLLAKELGVESPELFLDPSWSLSTH 522

Query: 62  DNDFFFQEVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSL 121
                 Q V  ++D   G+GPVV DGYG  YN     I F +S+F SC  T A +FA  L
Sbjct: 523 FVLSTSQ-VPTETDIGGGFGPVVDDGYGICYNINGDRIHFHISSFHSCPETDADRFAKYL 581

Query: 122 DESL 125
           +++L
Sbjct: 582 EKAL 585

Length = 590

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	143
KOG3717|consensus	612		100.0
PF00755	591	Carn_acyltransf: Choline/Carnitine o-acyltransfera	100.0
KOG3718|consensus	609		99.97
KOG3719|consensus	638		99.97
KOG3716|consensus	764		99.96
PF06974	153	DUF1298: Protein of unknown function (DUF1298); In	95.48

>KOG3717|consensus

Probab=100.00  E-value=9.5e-41  Score=282.25  Aligned_cols=130  Identities=46%  Similarity=0.890  Sum_probs=126.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhCCCCC-CCcCchhHHhhcCCCCcee--ccCCCCCCCcc
Q psy934            2 KDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFF--QEVACKSDSFM   78 (143)
Q Consensus         2 s~~ek~~ll~~A~~~H~~~~~~a~~G~G~DRHL~gL~~~a~~~~~~~-~lF~d~~~~~~~~~~~~~l--S~~~~~~~~~~   78 (143)
                      +.+||+++|+.|+++|+.+++.|++|.||||||+|||++|++.+.++ +||.||.|..+++   |.|  ||+++..+.++
T Consensus       472 ~~~ek~~llr~Av~~h~~yt~~ai~G~gvDrHLlgLk~~a~e~~~~iPelF~dp~y~~s~~---F~lSTSQV~t~~d~~m  548 (612)
T KOG3717|consen  472 PKSEKLELLRKAVQAHTKYTKRAIRGNGVDRHLLGLKLMAIENCKPIPELFKDPSYAISMH---FLLSTSQVPTKTDIFM  548 (612)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCCCcchhhcCcHhhHhhe---eeeecccCccccceee
Confidence            56899999999999999999999999999999999999999999999 9999999999999   999  68999999999


Q ss_pred             ccccccCCCceeeecccCCeEEEEEEeccCCCCCcHHHHHHHHHHHHHHHHHHhhc
Q psy934           79 GYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES  134 (143)
Q Consensus        79 gfgp~~~dGyGi~Y~i~~~~i~f~iss~~~~~~t~~~~F~~~L~~al~~m~~ll~~  134 (143)
                      |||||+||||||||+++++.|.|+||+|++|+.|++.+|+..|++|+.||+++|+.
T Consensus       549 ~yGpvv~dGYG~cYNp~~~~i~f~isaf~sc~~Ts~~rfak~L~~al~dmkdll~~  604 (612)
T KOG3717|consen  549 GYGPVVPDGYGCCYNPQEEHIIFAISAFRSCPETSASRFAKYLEQALDDMRDLLSN  604 (612)
T ss_pred             eecCcCCCCcccccCCCcceEEEEeeccccCccccHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999985

>PF00755 Carn_acyltransf: Choline/Carnitine o-acyltransferase; InterPro: IPR000542 A number of eukaryotic acetyltransferases can, on the basis of sequence similarities, be grouped together into a family

Probab=100.00  E-value=8.3e-38  Score=272.07  Aligned_cols=126  Identities=43%  Similarity=0.726  Sum_probs=113.1

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhCCCCC-CCcCchhHHhhcCCCCceec--cCCCCCCCcc
Q psy934            2 KDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQ--EVACKSDSFM   78 (143)
Q Consensus         2 s~~ek~~ll~~A~~~H~~~~~~a~~G~G~DRHL~gL~~~a~~~~~~~-~lF~d~~~~~~~~~~~~~lS--~~~~~~~~~~   78 (143)
                      +.+||++||++|+++|++++++|++|+||||||+||+++|++.|.++ +||+||+|+++++   |.||  +++......+
T Consensus       463 ~~~e~~~ll~~A~~~H~~~~~~a~~G~G~dRHL~~L~~~a~~~~~~~P~lf~d~~~~~~~~---~~lsTS~~~~~~~~~~  539 (591)
T PF00755_consen  463 SKEEKRELLRAAVKAHKQYIKEAMRGKGFDRHLFGLRCLAKENGIELPELFSDPAYKRSSN---FVLSTSQVPSPALSGG  539 (591)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHHHTTTSSHHHHHHHHHHHHHTTSS--HHHHSHHHHHHTS----SEEEEEEEESSSEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhccchhhhccChHHHhcCC---ceeecccccccccccc
Confidence            56899999999999999999999999999999999999999989999 8999999999999   9995  4666667789


Q ss_pred             ccccccCCCceeeecccCCeEEEEEEeccCCCCCcHHHHHHHHHHHHHHHHH
Q psy934           79 GYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGN  130 (143)
Q Consensus        79 gfgp~~~dGyGi~Y~i~~~~i~f~iss~~~~~~t~~~~F~~~L~~al~~m~~  130 (143)
                      |||||+||||||+|+|.+|+|.|+||+|++|+.|++++|+++|++||+||++
T Consensus       540 gfgpv~~dGyGi~Y~i~~~~i~f~iss~~~~~~t~~~~f~~~l~~al~dm~d  591 (591)
T PF00755_consen  540 GFGPVVPDGYGICYNIQPDSISFSISSFKSCPETSSERFAKALEQALRDMRD  591 (591)
T ss_dssp             E---SSTTSEEEEEEEESSEEEEEEEEETTSTTS-HHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCcceEEEEEecCCeEEEEEEecCCCCcccHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999999999999999985

These enzymes include: Choline o-acetyltransferase 2.3.1.6 from EC, an enzyme that catalyses the biosynthesis of the neurotransmitter acetylcholine []. Carnitine o-acetyltransferase 2.3.1.7 from EC []. Peroxisomal carnitine octanoyltransferase 2.3.1.137 from EC, a fatty acid beta-oxidation pathway enzyme which is involved in the transport of medium-chain acyl-coenzyme A's from peroxisome to mitochondria []. Mitochondrial carnitine palmitoyltransferases I and II 2.3.1.21 from EC (CPT), enzymes involved in fatty acid metabolism and transport []. Mycoplasma pneumoniae putative acetyltransferase C09_orf600. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 2DEB_B 2H4T_A 2FW3_A 2RCU_B 2FYO_A 1S5O_A 1NM8_A 1T7Q_B 2H3W_B 1NDI_B ....

>KOG3718|consensus

Probab=99.97  E-value=2.1e-31  Score=222.74  Aligned_cols=129  Identities=26%  Similarity=0.443  Sum_probs=112.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhCCCCC-CCcCchhHHhhcCCCCceeccCCCCCCCcccc-
Q psy934            3 DKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSDSFMGY-   80 (143)
Q Consensus         3 ~~ek~~ll~~A~~~H~~~~~~a~~G~G~DRHL~gL~~~a~~~~~~~-~lF~d~~~~~~~~~~~~~lS~~~~~~~~~~gf-   80 (143)
                      .+++..+|+.|+.+|+.+|++|+.|+||||||+||++++.+.+.++ +||.||.|.++.++|||+||++.......+|| 
T Consensus       473 ~e~lk~lf~~A~n~Hn~lM~d~~~GkG~DRHl~GL~laa~e~~~~iPefl~dp~fskSGGgGNFvLSTSf~Gy~~tfG~V  552 (609)
T KOG3718|consen  473 DESLKRLFRRAVNEHNHLMNDARKGKGIDRHLFGLWLAAYESKMDIPEFLDDPMFSKSGGGGNFVLSTSFLGYTATFGFV  552 (609)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHhcCCchhhhcCccccccCCCCcEEEEeehhcchhcccee
Confidence            3678899999999999999999999999999999999999999999 89999999999999999998766555567788 


Q ss_pred             ccccCCCceeeecccCCeEEEEEEeccCCCCCcHHHHHHHHHHHHHHHHHHh
Q psy934           81 GPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLV  132 (143)
Q Consensus        81 gp~~~dGyGi~Y~i~~~~i~f~iss~~~~~~t~~~~F~~~L~~al~~m~~ll  132 (143)
                      +|+++||||+.|.|.+++|.+.+|+|++|++|+.+ |+..|..++..+...|
T Consensus       553 apMv~dGYG~FY~I~~~r~~va~Saw~ds~~t~ae-k~~ni~~~lf~~~~~L  603 (609)
T KOG3718|consen  553 APMVFDGYGVFYSITSERVFVATSAWRDSLKTSAE-KFNNIFKDLFRRISVL  603 (609)
T ss_pred             eeecccCcceEEEeccceEEEehhhhhccchhhHH-HHHHHHHHHHhhHHHh
Confidence            79999999999999999999999999999876555 5555555555554444

>KOG3719|consensus

Probab=99.97  E-value=4e-31  Score=222.84  Aligned_cols=129  Identities=31%  Similarity=0.516  Sum_probs=115.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhCCCCC-CCcCchhHHhhcCCCCceec--cCCCCCCCcccc
Q psy934            4 KKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQ--EVACKSDSFMGY   80 (143)
Q Consensus         4 ~ek~~ll~~A~~~H~~~~~~a~~G~G~DRHL~gL~~~a~~~~~~~-~lF~d~~~~~~~~~~~~~lS--~~~~~~~~~~gf   80 (143)
                      .+.+.++.+|.+.|.+++|+|..|+|+||||+|||++++..++++ +||.||+|.+.++   +.||  +++++....+||
T Consensus       505 ~kl~~li~~Cs~~H~qltKeasmGqG~DRHl~ALk~la~~e~~~~pdlf~dp~y~~~~~---nvLstStlgn~a~~~gGf  581 (638)
T KOG3719|consen  505 GKLQQLIDTCSKTHGQLTKEASMGQGYDRHLFALKHLAQKESIPLPDLFEDPAYTRMNN---NVLSTSTLGNPALTAGGF  581 (638)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHhcCCCCchhhcCcccccccC---ceEeeccCCchhhhccCc
Confidence            355666777777999999999999999999999999999889999 9999999999999   9995  455555667999


Q ss_pred             ccccCCCceeeecccCCeEEEEEEeccCCCCCcHHHHHHHHHHHHHHHHHHhhccccc
Q psy934           81 GPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRKIS  138 (143)
Q Consensus        81 gp~~~dGyGi~Y~i~~~~i~f~iss~~~~~~t~~~~F~~~L~~al~~m~~ll~~~~~~  138 (143)
                      ||||+|||||+|+|.||.+...|||+++   ..+.+|..+|+++|.+|+..++.++..
T Consensus       582 gPvv~~GFGIGY~I~d~~vg~vVsS~~~---q~~~~f~~~leksL~ei~~~~~~~ks~  636 (638)
T KOG3719|consen  582 GPVVPNGFGIGYIIKDDQVGAVVSSYKR---QRGARFMFMLEKSLDEIRSYLRMSKST  636 (638)
T ss_pred             cccccCCcceeeEeecCccceEEecccc---ccHHHHHHHHHHHHHHHHHHHhccccc
Confidence            9999999999999999999999999975   349999999999999999999876543

>KOG3716|consensus

Probab=99.96  E-value=3e-30  Score=222.23  Aligned_cols=129  Identities=29%  Similarity=0.450  Sum_probs=108.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhCCCCCCCcC---chhHHhhcCCCCceeccCCCC-----
Q psy934            2 KDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPCELFQ---DEAYKLSNEDNDFFFQEVACK-----   73 (143)
Q Consensus         2 s~~ek~~ll~~A~~~H~~~~~~a~~G~G~DRHL~gL~~~a~~~~~~~~lF~---d~~~~~~~~~~~~~lS~~~~~-----   73 (143)
                      +.++|++||++||++|+.+.++||.|+|||||||+|+++++..+.+-+|+.   .+.|..|+       ||+|..     
T Consensus       616 T~~~rl~llk~Acd~Hq~~yk~aM~G~GvDRHLF~LyVvskyL~~~SPFL~~v~s~~W~LST-------Sq~P~~q~~~~  688 (764)
T KOG3716|consen  616 TKQERLQLLKKACDKHQLNYKEAMTGQGVDRHLFALYVVSKYLGVQSPFLDEVLSEKWLLST-------SQTPNMQENSF  688 (764)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhhcCCccceeeeeeeehhhcccCChHHHhhcCCceeecc-------cCCcccchhcc
Confidence            457999999999999999999999999999999999999998776533222   24343333       344433     


Q ss_pred             --------CCCccccccccCCCceeeeccc-CCeEEEEEEeccCCCCCcHHHHHHHHHHHHHHHHHHhhcccc
Q psy934           74 --------SDSFMGYGPVVPDGYGCSYNPR-EATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRKI  137 (143)
Q Consensus        74 --------~~~~~gfgp~~~dGyGi~Y~i~-~~~i~f~iss~~~~~~t~~~~F~~~L~~al~~m~~ll~~~~~  137 (143)
                              ...++|||||..|||||||.+. ++.|.|+|||++|++.||+.||.++|.+|+.||++|++..+.
T Consensus       689 d~~~~p~~i~~GggFGpvaddGYGVsY~~~G~~~I~fHIsSk~Ss~~TDS~Rfg~hl~eal~di~~Lf~~~~~  761 (764)
T KOG3716|consen  689 DEDKSPDNISLGGGFGPVADDGYGVSYIFAGENAIFFHISSKHSSENTDSHRFGQHLKEALHDIADLFEDATA  761 (764)
T ss_pred             CcccCccccccCCccCCccCCCceeEEEEecCceEEEEeecccccccccHHHHHHHHHHHHHHHHHHHhhhcc
Confidence                    1266899999999999999997 779999999999999999999999999999999999987654

>PF06974 DUF1298: Protein of unknown function (DUF1298); InterPro: IPR009721 This entry represents the C terminus (approximately 170 residues) of a number of hypothetical plant proteins

Probab=95.48  E-value=0.18  Score=36.85  Aligned_cols=65  Identities=11%  Similarity=0.202  Sum_probs=44.6

Q ss_pred             ceeccCCCCCC---------Ccccccc-ccCCCceeeecccCCeEEEEEEeccCCCCCcHHHHHHHHHHHHHHHHH
Q psy934           65 FFFQEVACKSD---------SFMGYGP-VVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGN  130 (143)
Q Consensus        65 ~~lS~~~~~~~---------~~~gfgp-~~~dGyGi~Y~i~~~~i~f~iss~~~~~~t~~~~F~~~L~~al~~m~~  130 (143)
                      ..+|++|.+..         ..+.+.| ..+.|.+|+..=..+++.|.|.+-++- --|.++|.+++++++.+|++
T Consensus        78 ~viSNVPGP~~~l~~~G~~v~~i~~~~~~~~~~L~itv~SY~g~l~~gi~ad~~~-vpD~~~l~~~~~~~l~eL~~  152 (153)
T PF06974_consen   78 LVISNVPGPQEPLYFAGARVEYIYPSPLGDGQALNITVFSYAGKLDFGIVADRDA-VPDPQRLADCFEEALEELKE  152 (153)
T ss_pred             EEEecCCCChhheEECCeeeEEEEeeeecCCcceEEEEEEeCCEEEEEEEEcccc-CCCHHHHHHHHHHHHHHHHc
Confidence            55599887731         1111222 234455565555699999999987653 34899999999999999985

O-acyltransferase WSD1 is a bifunctional wax ester synthase/diacylglycerol acyltransferase, which is involved in cuticular wax biosynthesis [].; GO: 0004144 diacylglycerol O-acyltransferase activity

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	143
2fy2_A	612	Structures Of Ligand Bound Human Choline Acetyltran		2e-19
1t7q_A	618	Crystal Structure Of The F565a Mutant Of Murine Car		6e-19
1q6x_A	644	Crystal Structure Of Rat Choline Acetyltransferase		9e-19
1t1u_A	639	Structural Insights And Functional Implications Of		9e-19
1ndf_A	596	Carnitine Acetyltransferase In Complex With Carniti		2e-18
2h3p_A	599	Crystal Structure Of Murine Carnitine Acetyltransfe		2e-18
1nm8_A	616	Structure Of Human Carnitine Acetyltransferase: Mol		5e-18
2h3w_A	599	Crystal Structure Of The S554aM564G MUTANT OF MURIN		2e-17
1t7n_A	618	Crystal Structure Of The M564g Mutant Of Murine Cra		2e-17
1ndb_A	596	Crystal Structure Of Carnitine Acetyltransferase Le		2e-17
1xmd_A	612	M335v Mutant Structure Of Mouse Carnitine Octanoylt		2e-08
1xmc_A	612	C323m Mutant Structure Of Mouse Carnitine Octanoylt		2e-08
1xl7_A	612	Crystal Structure Of Mouse Carnitine Octanoyltransf		7e-08
2deb_A	653	Crystal Structure Of Rat Carnitine Palmitoyltransfe		1e-07
2fw3_A	653	Crystal Structure Of Rat Carnitine Palmitoyltransfe		1e-07
2h4t_A	626	Crystal Structure Of Rat Carnitine Palmitoyltransfe		4e-07

>pdb|2FY2|A Chain A, Structures Of Ligand Bound Human Choline Acetyltransferase Provide Insight Into Regulation Of Acetylcholine Synthesis Length = 612

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/119 (43%), Positives = 72/119 (60%), Gaps = 8/119 (6%)
Query: 17  QTQIMTENIQGEGIDLHLLGLRQ--TALEHNIPCELFQDEAYKLSNEDNDFFFQ--EVAC 72
           QT      I G  ID HLL LR+   A+   +P E+F DE Y +SN    F     +V  
Sbjct: 486 QTAYTVMAITGMAIDNHLLALRELARAMCAALP-EMFMDETYLMSNR---FVLSTSQVPT 541
Query: 73  KSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNL 131
            ++ F  YGPVVP+GYG  YNP+  TI+FC+S+F SC  TS++KFA +++ESL  + +L
Sbjct: 542 TTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCAATSSSKFAKAVEESLIDMRDL 600

>pdb|1T7Q|A Chain A, Crystal Structure Of The F565a Mutant Of Murine Carnitine Acetyltransferase In Complex With Carnitine And Coa Length = 618

Iteration: 1
 Score = 89.4 bits (220), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
Query: 25  IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPV 83
           I+GE  D HLLGL+  A+E  +   ++F D +Y ++   N     +V  K+D  M +GPV
Sbjct: 503 IRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFN-LSTSQVPAKTDCVMAFGPV 561
Query: 84  VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESR 135
           VPDGYG  YNP EA I F VSA+ SC  T+AA+ A  L+++L  +  L+++ 
Sbjct: 562 VPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNH 613

>pdb|1Q6X|A Chain A, Crystal Structure Of Rat Choline Acetyltransferase Length = 644

Iteration: 1
 Score = 89.0 bits (219), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 17  QTQIMTENIQGEGIDLHLLGLRQTALEH-NIPCELFQDEAYKLSNEDNDFFFQ--EVACK 73
           QT+     I G  ID HLL LR+ A +    P E+F DE Y +SN    F     +V   
Sbjct: 499 QTEYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNR---FVLSTSQVPTT 555
Query: 74  SDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVE 133
            + F  YGPVVP+GYG  YNP+   I FC+S+F SC  TS+ +FA ++  SL  + +L  
Sbjct: 556 MEMFCCYGPVVPNGYGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDLCS 615
Query: 134 SRK 136
           SR+
Sbjct: 616 SRQ 618

>pdb|1T1U|A Chain A, Structural Insights And Functional Implications Of Choline Acetyltransferase Length = 639

Iteration: 1
 Score = 89.0 bits (219), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 17  QTQIMTENIQGEGIDLHLLGLRQTALEH-NIPCELFQDEAYKLSNEDNDFFFQ--EVACK 73
           QT+     I G  ID HLL LR+ A +    P E+F DE Y +SN    F     +V   
Sbjct: 498 QTEYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNR---FVLSTSQVPTT 554
Query: 74  SDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVE 133
            + F  YGPVVP+GYG  YNP+   I FC+S+F SC  TS+ +FA ++  SL  + +L  
Sbjct: 555 MEMFCCYGPVVPNGYGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDLCS 614
Query: 134 SRK 136
           SR+
Sbjct: 615 SRQ 617

>pdb|1NDF|A Chain A, Carnitine Acetyltransferase In Complex With Carnitine Length = 596

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
Query: 25  IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPV 83
           I+GE  D HLLGL+  A+E  +   ++F D +Y ++   N     +V  K+D  M +GPV
Sbjct: 482 IRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFN-LSTSQVPAKTDCVMFFGPV 540
Query: 84  VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESR 135
           VPDGYG  YNP EA I F VSA+ SC  T+AA+ A  L+++L  +  L+++ 
Sbjct: 541 VPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNH 592

>pdb|2H3P|A Chain A, Crystal Structure Of Murine Carnitine Acetyltransferase In Complex With Carnitine And Acetyl-Coa Length = 599

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
Query: 25  IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPV 83
           I+GE  D HLLGL+  A+E  +   ++F D +Y ++   N     +V  K+D  M +GPV
Sbjct: 485 IRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFN-LSTSQVPAKTDCVMFFGPV 543
Query: 84  VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESR 135
           VPDGYG  YNP EA I F VSA+ SC  T+AA+ A  L+++L  +  L+++ 
Sbjct: 544 VPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNH 595

>pdb|1NM8|A Chain A, Structure Of Human Carnitine Acetyltransferase: Molecular Basis For Fatty Acyl Transfer Length = 616

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 46/111 (41%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Query: 25  IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPV 83
           I+GE  D HLLGL+  A+E  +   ++F D +Y ++   +     +V  K+D  M +GPV
Sbjct: 490 IRGEAFDRHLLGLKLQAIEDLVSTPDIFMDTSYAIAMHFH-LSTSQVPAKTDCVMFFGPV 548
Query: 84  VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 134
           VPDGYG  YNP EA I F +SA+ SC  T+AA+ A  L+++L  +  L++S
Sbjct: 549 VPDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRALLQS 599

>pdb|2H3W|A Chain A, Crystal Structure Of The S554aM564G MUTANT OF MURINE Carnitine Acetyltransferase In Complex With Hexanoylcarnitine And Coa Length = 599

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Query: 25  IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPV 83
           I+GE  D HLLGL+  A+E  +   ++F D +Y ++   N     +V  K+D    +GPV
Sbjct: 485 IRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFN-LSTAQVPAKTDCVGFFGPV 543
Query: 84  VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESR 135
           VPDGYG  YNP EA I F VSA+ SC  T+AA+ A  L+++L  +  L+++ 
Sbjct: 544 VPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNH 595

>pdb|1T7N|A Chain A, Crystal Structure Of The M564g Mutant Of Murine Crat Length = 618

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Query: 25  IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPV 83
           I+GE  D HLLGL+  A+E  +   ++F D +Y ++   N     +V  K+D    +GPV
Sbjct: 503 IRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFN-LSTSQVPAKTDCVGFFGPV 561
Query: 84  VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESR 135
           VPDGYG  YNP EA I F VSA+ SC  T+AA+ A  L+++L  +  L+++ 
Sbjct: 562 VPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNH 613

>pdb|1NDB|A Chain A, Crystal Structure Of Carnitine Acetyltransferase Length = 596

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/102 (44%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Query: 25  IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPV 83
           I+GE  D HLLGL+  A+E  +   ++F D +Y ++   N     +V  K+D    +GPV
Sbjct: 482 IRGEAFDRHLLGLKLQAIEDLVSXPDIFXDTSYAIAXHFN-LSTSQVPAKTDCVXFFGPV 540
Query: 84  VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESL 125
           VPDGYG  YNP EA I F VSA+ SC  T+AA+ A  L+++L
Sbjct: 541 VPDGYGICYNPXEAHINFSVSAYNSCAETNAARXAHYLEKAL 582

>pdb|1XMD|A Chain A, M335v Mutant Structure Of Mouse Carnitine Octanoyltransferase Length = 612

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 17  QTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSD 75
             ++M +   G+G D HLLGL   A E  +P  ELF+D  +  S    +F        S 
Sbjct: 490 HNKMMKDCSHGKGFDRHLLGLLLIAKEEGLPVPELFEDPLFSRSGGGGNFVL------ST 543
Query: 76  SFMGY----GPVVP---DGYGCSYNPREATIVFCVSAFKSCLTTSAAKFA 118
           S +GY    G VVP   +GYG  Y+ R+   V   S+++SC  T A K  
Sbjct: 544 SLVGYLRVQGVVVPMVHNGYGFFYHIRDDRFVVACSSWRSCPETDAEKLV 593

>pdb|1XMC|A Chain A, C323m Mutant Structure Of Mouse Carnitine Octanoyltransferase Length = 612

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 17  QTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSD 75
             ++M +   G+G D HLLGL   A E  +P  ELF+D  +  S    +F        S 
Sbjct: 490 HNKMMKDCSHGKGFDRHLLGLLLIAKEEGLPVPELFEDPLFSRSGGGGNFVL------ST 543
Query: 76  SFMGY----GPVVP---DGYGCSYNPREATIVFCVSAFKSCLTTSAAKFA 118
           S +GY    G VVP   +GYG  Y+ R+   V   S+++SC  T A K  
Sbjct: 544 SLVGYLRVQGVVVPMVHNGYGFFYHIRDDRFVVACSSWRSCPETDAEKLV 593

>pdb|1XL7|A Chain A, Crystal Structure Of Mouse Carnitine Octanoyltransferase Length = 612

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 50/104 (48%), Gaps = 14/104 (13%)
Query: 26  QGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSDSFMGY---- 80
            G+G D HLLGL   A E  +P  ELF+D  +  S    +F        S S +GY    
Sbjct: 499 HGKGFDRHLLGLLLIAKEEGLPVPELFEDPLFSRSGGGGNFVL------STSLVGYLRVQ 552
Query: 81  GPVVP---DGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSL 121
           G VVP   +GYG  Y+ R+   V   S+++SC  T A K    +
Sbjct: 553 GVVVPXVHNGYGFFYHIRDDRFVVACSSWRSCPETDAEKLVQXI 596

>pdb|2DEB|A Chain A, Crystal Structure Of Rat Carnitine Palmitoyltransferase 2 In Space Group C2221 Length = 653

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 19  QIMTENIQGEGIDLHLLGLR--QTALEHNIPCELFQDEAYKLSNEDNDFFFQEVACKSDS 76
           Q+  E   G+G D HL  LR   TA   N+P EL+ D AY+  N  N      +   + S
Sbjct: 536 QLTKEAAXGQGFDRHLYALRYLATARGLNLP-ELYLDPAYQQXNH-NILSTSTLNSPAVS 593
Query: 77  FMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRK 136
             G+ PVVPDG+G +Y   +  I   VS++      +A +F   + + L  I + +E + 
Sbjct: 594 LGGFAPVVPDGFGIAYAVHDDWIGCNVSSYSG---RNAREFLHCVQKCLEDIFDALEGKA 650
Query: 137 IST 139
           I T
Sbjct: 651 IKT 653

>pdb|2FW3|A Chain A, Crystal Structure Of Rat Carnitine Palmitoyltransferase 2 In Complex With Antidiabetic Drug St1326 Length = 653

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 19  QIMTENIQGEGIDLHLLGLR--QTALEHNIPCELFQDEAYKLSNEDNDFFFQEVACKSDS 76
           Q+  E   G+G D HL  LR   TA   N+P EL+ D AY+  N  N      +   + S
Sbjct: 536 QLTKEAAMGQGFDRHLYALRYLATARGLNLP-ELYLDPAYQQMNH-NILSTSTLNSPAVS 593
Query: 77  FMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRK 136
             G+ PVVPDG+G +Y   +  I   VS++      +A +F   + + L  I + +E + 
Sbjct: 594 LGGFAPVVPDGFGIAYAVHDDWIGCNVSSYSG---RNAREFLHCVQKCLEDIFDALEGKA 650
Query: 137 IST 139
           I T
Sbjct: 651 IKT 653

>pdb|2H4T|A Chain A, Crystal Structure Of Rat Carnitine Palmitoyltransferase Ii Length = 626

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 7/121 (5%)
Query: 19  QIMTENIQGEGIDLHLLGLR--QTALEHNIPCELFQDEAYKLSNEDNDFFFQEVACKSDS 76
           Q+  E   G+G D HL  LR   TA   N+P EL+ D AY+  N  N      +   + S
Sbjct: 511 QLTKEATMGQGFDRHLYALRYLATARGLNLP-ELYLDPAYQQMNH-NILSTSTLNSPAVS 568
Query: 77  FMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRK 136
             G+ PVVPDG+G +Y   +  I   VS++      +A +F   + + L  I + +E + 
Sbjct: 569 LGGFAPVVPDGFGIAYAVHDDWIGCNVSSYSG---RNAREFLHCVQKCLEDIFDALEGKA 625
Query: 137 I 137
           I
Sbjct: 626 I 626

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	143
1t1u_A	639	Choline O-acetyltransferase; choline acetyltransfe	2e-30
1nm8_A	616	Carnitine O-acetyltransferase; two equally sized d	3e-30
2deb_A	653	CPT II, carnitine O-palmitoyltransferase II, mitoc	8e-28
1xl7_A	612	COT, peroxisomal carnitine O-octanoyltransferase;	7e-27

>1t1u_A Choline O-acetyltransferase; choline acetyltransferase; 1.55A {Rattus norvegicus} SCOP: c.43.1.3 c.43.1.3 PDB: 1q6x_A 2fy2_A 2fy3_A 2fy4_A* 2fy5_A* Length = 639

 Score =  114 bits (285), Expect = 2e-30
 Identities = 53/135 (39%), Positives = 74/135 (54%), Gaps = 2/135 (1%)

Query: 3   DKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIP-CELFQDEAYKLSNE 61
             +KL L   A++ QT+     I G  ID HLL LR+ A +      E+F DE Y +SN 
Sbjct: 484 ASEKLQLLQTAMQAQTEYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSN- 542

Query: 62  DNDFFFQEVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSL 121
                  +V    + F  YGPVVP+GYG  YNP+   I FC+S+F SC  TS+ +FA ++
Sbjct: 543 RFVLSTSQVPTTMEMFCCYGPVVPNGYGACYNPQPEAITFCISSFHSCKETSSVEFAEAV 602

Query: 122 DESLSAIGNLVESRK 136
             SL  + +L  SR+
Sbjct: 603 GASLVDMRDLCSSRQ 617

>1nm8_A Carnitine O-acetyltransferase; two equally sized domains, anti-parallel beta-strand; 1.60A {Homo sapiens} SCOP: c.43.1.3 c.43.1.3 PDB: 1s5o_A* 2h3u_A* 2h3p_A* 1t7q_A* 1t7n_A 1t7o_A* 1ndb_A 1ndf_A* 1ndi_A* 2h3w_A* Length = 616

 Score =  113 bits (283), Expect = 3e-30
 Identities = 49/133 (36%), Positives = 77/133 (57%), Gaps = 2/133 (1%)

Query: 3   DKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIP-CELFQDEAYKLSNE 61
           + +K++L   A++         I+GE  D HLLGL+  A+E  +   ++F D +Y ++  
Sbjct: 468 EHQKVELLRKAVQAHRGYTDRAIRGEAFDRHLLGLKLQAIEDLVSTPDIFMDTSYAIAM- 526

Query: 62  DNDFFFQEVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSL 121
                  +V  K+D  M +GPVVPDGYG  YNP EA I F +SA+ SC  T+AA+ A  L
Sbjct: 527 HFHLSTSQVPAKTDCVMFFGPVVPDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYL 586

Query: 122 DESLSAIGNLVES 134
           +++L  +  L++S
Sbjct: 587 EKALLDMRALLQS 599

>2deb_A CPT II, carnitine O-palmitoyltransferase II, mitochondrial; central six-stranded beta-sheet; HET: BOG COA PLM; 1.60A {Rattus norvegicus} PDB: 2fw3_A* 2fyo_A 2rcu_A* 2h4t_A* Length = 653

 Score =  106 bits (265), Expect = 8e-28
 Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 5/138 (3%)

Query: 3   DKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIP-CELFQDEAYKLSNE 61
             +   +     K   Q+  E   G+G D HL  LR  A    +   EL+ D AY+  N 
Sbjct: 520 VGELQHMMAECSKYHGQLTKEAAMGQGFDRHLYALRYLATARGLNLPELYLDPAYQQMNH 579

Query: 62  DNDFFFQEVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSL 121
           +       +   + S  G+ PVVPDG+G +Y   +  I   VS++      +A +F   +
Sbjct: 580 NILSTST-LNSPAVSLGGFAPVVPDGFGIAYAVHDDWIGCNVSSYSG---RNAREFLHCV 635

Query: 122 DESLSAIGNLVESRKIST 139
            + L  I + +E + I T
Sbjct: 636 QKCLEDIFDALEGKAIKT 653

>1xl7_A COT, peroxisomal carnitine O-octanoyltransferase; selenomethionine, hepes; HET: EPE; 2.00A {Mus musculus} SCOP: c.43.1.3 c.43.1.3 PDB: 1xl8_A* 1xmd_A* 1xmc_A* Length = 612

 Score =  103 bits (258), Expect = 7e-27
 Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 2/136 (1%)

Query: 4   KKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIP-CELFQDEAYKLSNED 62
            ++      A  K  ++M +   G+G D HLLGL   A E  +P  ELF+D  +  S   
Sbjct: 477 LERQQKMLEAFAKHNKMMKDCSHGKGFDRHLLGLLLIAKEEGLPVPELFEDPLFSRSGGG 536

Query: 63  NDFFFQEVACKSDSFMG-YGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSL 121
            +F             G   P+V +GYG  Y+ R+   V   S+++SC  T A K    +
Sbjct: 537 GNFVLSTSLVGYLRVQGVVVPMVHNGYGFFYHIRDDRFVVACSSWRSCPETDAEKLVQMI 596

Query: 122 DESLSAIGNLVESRKI 137
             +   +  L+ +  +
Sbjct: 597 FHAFHDMIQLMNTAHL 612

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	143
1t1u_A	639	Choline O-acetyltransferase; choline acetyltransfe	100.0
1nm8_A	616	Carnitine O-acetyltransferase; two equally sized d	100.0
1xl7_A	612	COT, peroxisomal carnitine O-octanoyltransferase;	100.0
2deb_A	653	CPT II, carnitine O-palmitoyltransferase II, mitoc	100.0

>1t1u_A Choline O-acetyltransferase; choline acetyltransferase; 1.55A {Rattus norvegicus} SCOP: c.43.1.3 c.43.1.3 PDB: 1q6x_A 2fy2_A 2fy3_A 2fy4_A* 2fy5_A*

Probab=100.00  E-value=2.4e-40  Score=288.91  Aligned_cols=131  Identities=41%  Similarity=0.712  Sum_probs=124.1

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhCCCCC-CCcCchhHHhhcCCCCcee--ccCCCCCCCcc
Q psy934            2 KDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFF--QEVACKSDSFM   78 (143)
Q Consensus         2 s~~ek~~ll~~A~~~H~~~~~~a~~G~G~DRHL~gL~~~a~~~~~~~-~lF~d~~~~~~~~~~~~~l--S~~~~~~~~~~   78 (143)
                      +.+||+++|++|+++|++++++|+.|+|||||||||++++++.|+++ +||.||+|.++++   |.|  ||+++.....+
T Consensus       483 ~~~ek~~ll~~A~~~H~~~~~~a~~G~G~DRHL~gL~~~a~~~g~~~P~lF~dp~~~~~~~---~~LSTSq~~~~~~~~~  559 (639)
T 1t1u_A          483 PASEKLQLLQTAMQAQTEYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNR---FVLSTSQVPTTMEMFC  559 (639)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTTCSCCHHHHSHHHHHHTC---CSEEEEECCCSSSEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHhcCCCCcccccCchhhhhCC---CEEEecCCCCCccccc
Confidence            46899999999999999999999999999999999999999989999 9999999999999   999  56777777789


Q ss_pred             ccccccCCCceeeecccCCeEEEEEEeccCCCCCcHHHHHHHHHHHHHHHHHHhhcc
Q psy934           79 GYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESR  135 (143)
Q Consensus        79 gfgp~~~dGyGi~Y~i~~~~i~f~iss~~~~~~t~~~~F~~~L~~al~~m~~ll~~~  135 (143)
                      |||||+||||||+|+|.+|+|.|+||+|++|+.|++.+|+++|++||.||++||...
T Consensus       560 gfgPv~~dGyGi~Y~i~~~~i~f~iss~~s~~~t~~~rf~~~L~~al~dm~~ll~~~  616 (639)
T 1t1u_A          560 CYGPVVPNGYGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDLCSSR  616 (639)
T ss_dssp             ECCCSSTTCEEEEEEECSSCEEEEEEEETTSTTCCHHHHHHHHHHHHHHHHHHHCC-
T ss_pred             eEcccCCCceEEEEEEcCCeEEEEEEeCCCCcccCHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999999999999854

>1nm8_A Carnitine O-acetyltransferase; two equally sized domains, anti-parallel beta-strand; 1.60A {Homo sapiens} SCOP: c.43.1.3 c.43.1.3 PDB: 1s5o_A* 2h3u_A* 2h3p_A* 1t7q_A* 1t7n_A 1t7o_A* 1ndb_A 1ndf_A* 1ndi_A* 2h3w_A*

Probab=100.00  E-value=3.6e-40  Score=286.85  Aligned_cols=132  Identities=38%  Similarity=0.705  Sum_probs=124.3

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhCCCCC-CCcCchhHHhhcCCCCcee--ccCCCCCCCcc
Q psy934            2 KDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFF--QEVACKSDSFM   78 (143)
Q Consensus         2 s~~ek~~ll~~A~~~H~~~~~~a~~G~G~DRHL~gL~~~a~~~~~~~-~lF~d~~~~~~~~~~~~~l--S~~~~~~~~~~   78 (143)
                      +.+||+++|++|+++|++++++|+.|+|||||||||++++++.|+++ +||.||+|.++++   |.|  ||++......+
T Consensus       467 ~~~ek~~ll~~A~~~H~~~~~~a~~G~G~DRHL~gL~~~a~~~g~~~P~lF~dp~~~~~~~---~~LSTSq~~~~~~~~~  543 (616)
T 1nm8_A          467 TEHQKVELLRKAVQAHRGYTDRAIRGEAFDRHLLGLKLQAIEDLVSTPDIFMDTSYAIAMH---FHLSTSQVPAKTDCVM  543 (616)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHTTCCCCHHHHSHHHHHHTC---CSEEEEECCCSSSCEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHcCCCCcccccCchhhhcCC---CEEeecCCCCCccCce
Confidence            46899999999999999999999999999999999999999989999 9999999999999   999  56777778889


Q ss_pred             ccccccCCCceeeecccCCeEEEEEEeccCCCCCcHHHHHHHHHHHHHHHHHHhhccc
Q psy934           79 GYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRK  136 (143)
Q Consensus        79 gfgp~~~dGyGi~Y~i~~~~i~f~iss~~~~~~t~~~~F~~~L~~al~~m~~ll~~~~  136 (143)
                      |||||+||||||+|+|.+|+|.|+||+|++|+.|++.+|+++|++||.||++||...+
T Consensus       544 gfgPv~~dGyGi~Y~i~~~~i~f~iss~~s~~~t~~~rf~~~L~~al~dm~~ll~~~~  601 (616)
T 1nm8_A          544 FFGPVVPDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRALLQSHP  601 (616)
T ss_dssp             ECCCSSTTCEEEEEEECSSCEEEEEEEETTSTTCCHHHHHHHHHHHHHHHHHHHHC--
T ss_pred             EEecCCCCeeEEEEEecCCeEEEEEEeCCCCccccHHHHHHHHHHHHHHHHHHHhccc
Confidence            9999999999999999999999999999999999999999999999999999998544

>1xl7_A COT, peroxisomal carnitine O-octanoyltransferase; selenomethionine, hepes; HET: EPE; 2.00A {Mus musculus} SCOP: c.43.1.3 c.43.1.3 PDB: 1xl8_A* 1xmd_A* 1xmc_A*

Probab=100.00  E-value=1.9e-39  Score=282.20  Aligned_cols=130  Identities=27%  Similarity=0.417  Sum_probs=121.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhCCCCC-CCcCchhHHh---hcCCCCcee--ccCCCCCC
Q psy934            2 KDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKL---SNEDNDFFF--QEVACKSD   75 (143)
Q Consensus         2 s~~ek~~ll~~A~~~H~~~~~~a~~G~G~DRHL~gL~~~a~~~~~~~-~lF~d~~~~~---~~~~~~~~l--S~~~~~~~   75 (143)
                      +.+||+++|++|+++|++++++|+.|+|||||||||++++++.|+++ +||.||+|.+   +++   |.|  ||+ ....
T Consensus       475 ~~~ek~~ll~~A~~~H~~~~~~a~~G~G~DRHL~gL~~~a~~~g~~~P~lF~d~~~~~sg~~~~---~~LSTS~~-~~~~  550 (612)
T 1xl7_A          475 SLLERQQKMLEAFAKHNKMMKDCSHGKGFDRHLLGLLLIAKEEGLPVPELFEDPLFSRSGGGGN---FVLSTSLV-GYLR  550 (612)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHTTCCCCGGGTSHHHHHTTTTTC---CSEEEEEC-CSSS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCCCCchhhcChhhhcccCCCC---CEEecCCC-CCCC
Confidence            46899999999999999999999999999999999999999989999 9999999999   777   999  456 4456


Q ss_pred             CccccccccCCCceeeecccCCeEEEEEEeccCCCCCcHHHHHHHHHHHHHHHHHHhhcc
Q psy934           76 SFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESR  135 (143)
Q Consensus        76 ~~~gfgp~~~dGyGi~Y~i~~~~i~f~iss~~~~~~t~~~~F~~~L~~al~~m~~ll~~~  135 (143)
                      ..+|||||+||||||+|+|.+|+|.|+||+|++|+.|++.+|+++|++||.||++||...
T Consensus       551 ~~~gfgPv~~dGyGi~Y~i~~~~i~f~iss~~s~~~t~~~rf~~~L~~al~dm~~ll~~~  610 (612)
T 1xl7_A          551 VQGVVVPMVHNGYGFFYHIRDDRFVVACSSWRSCPETDAEKLVQMIFHAFHDMIQLMNTA  610 (612)
T ss_dssp             CCCBCCCSSTTCEEEEEEEETTEEEEEEEEETTCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEeccCCCeEEEEEEEcCCeEEEEEEecCCCCcccHHHHHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999999999999999999999999999999999999999753

>2deb_A CPT II, carnitine O-palmitoyltransferase II, mitochondrial; central six-stranded beta-sheet; HET: BOG COA PLM; 1.60A {Rattus norvegicus} PDB: 2fw3_A* 2fyo_A 2rcu_A* 2h4t_A*

Probab=100.00  E-value=7.8e-39  Score=279.82  Aligned_cols=132  Identities=28%  Similarity=0.437  Sum_probs=123.1

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhCCCCC-CCcCchhHHhhcCCCCcee--ccCCCCCCCcc
Q psy934            2 KDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFF--QEVACKSDSFM   78 (143)
Q Consensus         2 s~~ek~~ll~~A~~~H~~~~~~a~~G~G~DRHL~gL~~~a~~~~~~~-~lF~d~~~~~~~~~~~~~l--S~~~~~~~~~~   78 (143)
                      +.+||+++|++|+++|++++++|+.|+|||||||||++++++.|+++ +||.||+|.++++   |.|  ||++......+
T Consensus       519 ~~~ek~~ll~~A~~~H~~~~k~a~~G~G~DRHL~gL~~~a~~~g~~~P~lF~Dp~y~~~~~---~~LSTS~~~~~~~~~~  595 (653)
T 2deb_A          519 SVGELQHMMAECSKYHGQLTKEAAMGQGFDRHLYALRYLATARGLNLPELYLDPAYQQMNH---NILSTSTLNSPAVSLG  595 (653)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHTTCCCCGGGGSHHHHHHTS---CSEEEEECCCTTEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCCCCchhhcChhhhhhCC---cEEeecCCCCCccccc
Confidence            46899999999999999999999999999999999999999999999 8999999999999   999  56776667789


Q ss_pred             ccccccCCCceeeecccCCeEEEEEEeccCCCCCcHHHHHHHHHHHHHHHHHHhhcccccc
Q psy934           79 GYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRKIST  139 (143)
Q Consensus        79 gfgp~~~dGyGi~Y~i~~~~i~f~iss~~~~~~t~~~~F~~~L~~al~~m~~ll~~~~~~~  139 (143)
                      |||||+||||||+|+|.+|+|.|+||||+   .|++.+|+++|++||.||++||+..++.|
T Consensus       596 gfgPv~~dGyGi~Y~i~~~~i~f~iSs~~---~t~~~~F~~~L~~al~dm~~ll~~~~~~~  653 (653)
T 2deb_A          596 GFAPVVPDGFGIAYAVHDDWIGCNVSSYS---GRNAREFLHCVQKCLEDIFDALEGKAIKT  653 (653)
T ss_dssp             ECCCSSTTCEEEEEEECSSCEEEEEEECT---TSCHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             eeeccCCCceEEEEEecCCeEEEEEEeCC---CCCHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence            99999999999999999999999999996   68999999999999999999998776543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	143
d1nm8a2	214	c.43.1.3 (A:386-599) Carnitine acetyltransferase {	4e-36
d1t1ua2	215	c.43.1.3 (A:402-616) Choline O-acetyltransferase {	4e-36
d1xl7a2	218	c.43.1.3 (A:393-610) Peroxisomal carnitine O-octan	5e-35

>d1nm8a2 c.43.1.3 (A:386-599) Carnitine acetyltransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 214

class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: Choline/Carnitine O-acyltransferase
domain: Carnitine acetyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (305), Expect = 4e-36
 Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 2/134 (1%)

Query: 2   KDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIP-CELFQDEAYKLSN 60
            + +K++L   A++         I+GE  D HLLGL+  A+E  +   ++F D +Y ++ 
Sbjct: 82  TEHQKVELLRKAVQAHRGYTDRAIRGEAFDRHLLGLKLQAIEDLVSTPDIFMDTSYAIAM 141

Query: 61  EDNDFFFQEVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATS 120
                   +V  K+D  M +GPVVPDGYG  YNP EA I F +SA+ SC  T+AA+ A  
Sbjct: 142 -HFHLSTSQVPAKTDCVMFFGPVVPDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHY 200

Query: 121 LDESLSAIGNLVES 134
           L+++L  +  L++S
Sbjct: 201 LEKALLDMRALLQS 214

>d1t1ua2 c.43.1.3 (A:402-616) Choline O-acetyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 215

class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: Choline/Carnitine O-acyltransferase
domain: Choline O-acetyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  121 bits (305), Expect = 4e-36
 Identities = 54/135 (40%), Positives = 73/135 (54%), Gaps = 2/135 (1%)

Query: 1   MKDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIP-CELFQDEAYKLS 59
           M   +KL L   A++ QT+     I G  ID HLL LR+ A +      E+F DE Y +S
Sbjct: 82  MPASEKLQLLQTAMQAQTEYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMS 141

Query: 60  NEDNDFFFQEVACKSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFAT 119
           N       Q V    + F  YGPVVP+GYG  YNP+   I FC+S+F SC  TS+ +FA 
Sbjct: 142 NRFVLSTSQ-VPTTMEMFCCYGPVVPNGYGACYNPQPEAITFCISSFHSCKETSSVEFAE 200

Query: 120 SLDESLSAIGNLVES 134
           ++  SL  + +L  S
Sbjct: 201 AVGASLVDMRDLCSS 215

>d1xl7a2 c.43.1.3 (A:393-610) Peroxisomal carnitine O-octanoyltransferase, COT {Mouse (Mus musculus) [TaxId: 10090]} Length = 218

class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: Choline/Carnitine O-acyltransferase
domain: Peroxisomal carnitine O-octanoyltransferase, COT
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  118 bits (298), Expect = 5e-35
 Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 2/134 (1%)

Query: 3   DKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNE 61
             ++      A  K  ++M +   G+G D HLLGL   A E  +P  ELF+D  +  S  
Sbjct: 84  LLERQQKMLEAFAKHNKMMKDCSHGKGFDRHLLGLLLIAKEEGLPVPELFEDPLFSRSGG 143

Query: 62  DNDFFFQEVACKS-DSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATS 120
             +F                 P+V +GYG  Y+ R+   V   S+++SC  T A K    
Sbjct: 144 GGNFVLSTSLVGYLRVQGVVVPMVHNGYGFFYHIRDDRFVVACSSWRSCPETDAEKLVQM 203

Query: 121 LDESLSAIGNLVES 134
           +  +   +  L+ +
Sbjct: 204 IFHAFHDMIQLMNT 217

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	143
d1t1ua2	215	Choline O-acetyltransferase {Rat (Rattus norvegicu	100.0
d1nm8a2	214	Carnitine acetyltransferase {Human (Homo sapiens)	100.0
d1xl7a2	218	Peroxisomal carnitine O-octanoyltransferase, COT {	100.0

>d1t1ua2 c.43.1.3 (A:402-616) Choline O-acetyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: Choline/Carnitine O-acyltransferase
domain: Choline O-acetyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.9e-44  Score=275.15  Aligned_cols=130  Identities=41%  Similarity=0.705  Sum_probs=124.1

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhCCCCC-CCcCchhHHhhcCCCCcee--ccCCCCCCCcc
Q psy934            2 KDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFF--QEVACKSDSFM   78 (143)
Q Consensus         2 s~~ek~~ll~~A~~~H~~~~~~a~~G~G~DRHL~gL~~~a~~~~~~~-~lF~d~~~~~~~~~~~~~l--S~~~~~~~~~~   78 (143)
                      +.+||++||++|+++|++++++|++|+||||||+||+.++++.|+++ +||.||+|.++++   |.|  ||++.+....+
T Consensus        83 ~~~ek~~ll~~A~~~H~~~~~~a~~G~G~dRHL~aL~~~a~~~g~~~p~lF~d~~~~~~~~---~~LSTS~~~~~~~~~~  159 (215)
T d1t1ua2          83 PASEKLQLLQTAMQAQTEYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNR---FVLSTSQVPTTMEMFC  159 (215)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTTCSCCHHHHSHHHHHHTC---CSEEEEECCCSSSEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHcCCCCchhhcChHHHhhCC---CEEecCCCCCCccccc
Confidence            45899999999999999999999999999999999999999999999 9999999999999   999  66887778889


Q ss_pred             ccccccCCCceeeecccCCeEEEEEEeccCCCCCcHHHHHHHHHHHHHHHHHHhhc
Q psy934           79 GYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES  134 (143)
Q Consensus        79 gfgp~~~dGyGi~Y~i~~~~i~f~iss~~~~~~t~~~~F~~~L~~al~~m~~ll~~  134 (143)
                      ||||++||||||+|+|.+|+|.|+||+|++|++|++.+|+++|++||.||++||++
T Consensus       160 gfgp~~~dGyGi~Y~i~~d~i~f~iss~~s~~~t~~~~f~~~L~~al~~m~~ll~~  215 (215)
T d1t1ua2         160 CYGPVVPNGYGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDLCSS  215 (215)
T ss_dssp             ECCCSSTTCEEEEEEECSSCEEEEEEEETTSTTCCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             cccCcCCCceEEEEEecCCEEEEEEEeCCCCcccCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999999999999999863

>d1nm8a2 c.43.1.3 (A:386-599) Carnitine acetyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: Choline/Carnitine O-acyltransferase
domain: Carnitine acetyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-43  Score=270.94  Aligned_cols=130  Identities=38%  Similarity=0.716  Sum_probs=124.1

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhCCCCC-CCcCchhHHhhcCCCCcee--ccCCCCCCCcc
Q psy934            2 KDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFF--QEVACKSDSFM   78 (143)
Q Consensus         2 s~~ek~~ll~~A~~~H~~~~~~a~~G~G~DRHL~gL~~~a~~~~~~~-~lF~d~~~~~~~~~~~~~l--S~~~~~~~~~~   78 (143)
                      +.+||+++|++|+++|++++++|++|+||||||+||+.+|++.|+++ +||.||+|.++++   |.|  ||++.+....+
T Consensus        82 ~~~ek~~ll~~A~~~H~~~~~~a~~G~G~dRHL~aL~~~a~~~g~~~P~lF~d~~~~~~~~---~~LsTS~~~~~~~~~~  158 (214)
T d1nm8a2          82 TEHQKVELLRKAVQAHRGYTDRAIRGEAFDRHLLGLKLQAIEDLVSTPDIFMDTSYAIAMH---FHLSTSQVPAKTDCVM  158 (214)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHTTCCCCHHHHSHHHHHHTC---CSEEEEECCCSSSCEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHcCCCCCchhcCHHHHHhCC---CEEEcCCCCCCcccee
Confidence            56799999999999999999999999999999999999999999999 9999999999999   999  56777778889


Q ss_pred             ccccccCCCceeeecccCCeEEEEEEeccCCCCCcHHHHHHHHHHHHHHHHHHhhc
Q psy934           79 GYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES  134 (143)
Q Consensus        79 gfgp~~~dGyGi~Y~i~~~~i~f~iss~~~~~~t~~~~F~~~L~~al~~m~~ll~~  134 (143)
                      ||||++||||||+|+|.+|+|.|+||+|++|++|++++|.++|++||.||++||++
T Consensus       159 ~~gp~~~dGyGi~Y~i~~~~i~f~iss~~~~~~t~~~~f~~~L~~al~dm~~ll~~  214 (214)
T d1nm8a2         159 FFGPVVPDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRALLQS  214 (214)
T ss_dssp             ECCCSSTTCEEEEEEECSSCEEEEEEEETTSTTCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred             eecCCCCCeeEEEEEecCCEEEEEEEecCCCcccCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999999999999999974

>d1xl7a2 c.43.1.3 (A:393-610) Peroxisomal carnitine O-octanoyltransferase, COT {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: Choline/Carnitine O-acyltransferase
domain: Peroxisomal carnitine O-octanoyltransferase, COT
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.1e-43  Score=269.38  Aligned_cols=132  Identities=27%  Similarity=0.436  Sum_probs=122.1

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhCCCCC-CCcCchhHHhhcCCCCceecc--CCCCCCCcc
Q psy934            2 KDKKKLDLFDAAIKKQTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQE--VACKSDSFM   78 (143)
Q Consensus         2 s~~ek~~ll~~A~~~H~~~~~~a~~G~G~DRHL~gL~~~a~~~~~~~-~lF~d~~~~~~~~~~~~~lS~--~~~~~~~~~   78 (143)
                      +.+||++||++|+++|++++++|++|+||||||+||+.++++.|+++ +||+||+|.++...++|.||+  ++.. ...+
T Consensus        83 s~~e~~~ll~~A~~~H~~~~~~a~~G~G~dRHL~~L~~~a~~~g~~~P~lF~d~~~~~s~~~~~~~LsTS~~~~~-~~~g  161 (218)
T d1xl7a2          83 SLLERQQKMLEAFAKHNKMMKDCSHGKGFDRHLLGLLLIAKEEGLPVPELFEDPLFSRSGGGGNFVLSTSLVGYL-RVQG  161 (218)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHTTCCCCGGGTSHHHHHTTTTTCCSEEEEECCSS-SCCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCCCCCccccCcHHhhcCCCCCEEEecCCCCCc-cccc
Confidence            56899999999999999999999999999999999999999999999 999999999997666699954  5543 3457


Q ss_pred             ccccccCCCceeeecccCCeEEEEEEeccCCCCCcHHHHHHHHHHHHHHHHHHhhc
Q psy934           79 GYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES  134 (143)
Q Consensus        79 gfgp~~~dGyGi~Y~i~~~~i~f~iss~~~~~~t~~~~F~~~L~~al~~m~~ll~~  134 (143)
                      ||||++||||||+|+|.+|+|.|+||+|++|++|++++|.++|++||.||++||+.
T Consensus       162 ~f~P~~~dGyGi~Y~i~~d~i~~~vss~~s~~~t~~~~f~~~L~~al~dm~~ll~~  217 (218)
T d1xl7a2         162 VVVPMVHNGYGFFYHIRDDRFVVACSSWRSCPETDAEKLVQMIFHAFHDMIQLMNT  217 (218)
T ss_dssp             BCCCSSTTCEEEEEEEETTEEEEEEEEETTCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eecCCCCCeeEEEEEecCCEEEEEEEecCCCCccCHHHHHHHHHHHHHHHHHHHhc
Confidence            89999999999999999999999999999999999999999999999999999975