Psyllid ID: psy9526


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110---
MKFVLPMSLILASPPMSVVLASPQMSVVLASPPMSVVLASPPMSVVLASPPMSVVLASPPISVVLASPPMSVVLASPPMSVVLASPPMSVNYSQNQMSAKAIALVRADQKRRP
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccc
cccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccc
mkfvlpmslilasppmsvvlaspqmsvvlasppmsvvlasppmsvvlasppmsvvlasppisvvlasppmsvvlasppmsvvlasppmsvnysqNQMSAKAIALVRADQKRRP
MKFVLPMSLILASPPMSVVLASPQMSVVLASPPMSVVLASPPMSVVLASPPMSVVLASPPISVVLASPPMSVVLASPPMSVVLASPPMSVNYSQNQMSAKAIAlvradqkrrp
MKFVLPMSLILASPPMSVVLASPQMSVVLASPPMSVVLASPPMSVVLASPPMSVVLASPPISVVLASPPMSVVLASPPMSVVLASPPMSVNYSQNQMSAKAIALVRADQKRRP
******MSLILA****SVVLA*****VVL******VVL******VVLA***MSVVLASPPISVVLA******V****************************************
**F**PM**********************************************************************************************************
MKFVLPMSLILASPPMSVVLASPQMSVVLASPPMSVVLASPPMSVVLASPPMSVVLASPPISVVLASPPMSVVLASPPMSVVLASPPMSVNYSQNQMSAKAIALV********
*K*VLPMSLIL******************************************************************************************************
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKFVLPMSLILASPPMSVVLASPQMSVVLASPPMSVVLASPPMSVVLASPPMSVVLASPPISVVLASPPMSVVLASPPMSVVLASPPMSVNYSQNQMSAKAIALVRADQKRRP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query113
15811172 351 cell surface mucin-like protein [Ehrlich 0.840 0.270 0.463 1e-11
156349323202 predicted protein [Nematostella vectensi 0.707 0.396 0.325 7e-10
390351846119 PREDICTED: uncharacterized protein LOC10 0.707 0.672 0.4 1e-09
57238842 661 hypothetical protein Erum1110 [Ehrlichia 0.716 0.122 0.493 4e-09
58578772 625 hypothetical protein ERWE_CDS_01080 [Ehr 0.716 0.129 0.506 4e-09
449678384 1407 PREDICTED: uncharacterized protein LOC10 0.699 0.056 0.432 1e-07
440897331 283 Coagulation factor V, partial [Bos grunn 0.902 0.360 0.362 1e-06
260785506 1485 hypothetical protein BRAFLDRAFT_92247 [B 0.672 0.051 0.276 2e-06
359483188 1372 PREDICTED: putative receptor-like protei 0.690 0.056 0.3 2e-05
291231032 2971 PREDICTED: hypothetical protein [Saccogl 0.725 0.027 0.433 2e-05
>gi|15811172|gb|AAL08844.1|AF308673_2 cell surface mucin-like protein [Ehrlichia ruminantium] Back     alignment and taxonomy information
 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 62/95 (65%)

Query: 8   SLILASPPMSVVLASPQMSVVLASPPMSVVLASPPMSVVLASPPMSVVLASPPISVVLAS 67
           S++ +SP  SVV +SP+ SVV +SP  SVV +SP  SVV +SP  SVV +SP  SVV +S
Sbjct: 253 SVVTSSPEGSVVTSSPEGSVVTSSPEGSVVTSSPEGSVVTSSPEGSVVTSSPEGSVVTSS 312

Query: 68  PPMSVVLASPPMSVVLASPPMSVNYSQNQMSAKAI 102
           P  SVV +SP  SVV +SP ++  ++    S + +
Sbjct: 313 PEGSVVTSSPEGSVVTSSPEVAKGFTFGGRSGERV 347




Source: Ehrlichia ruminantium

Species: Ehrlichia ruminantium

Genus: Ehrlichia

Family: Anaplasmataceae

Order: Rickettsiales

Class: Alphaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi|156349323|ref|XP_001622011.1| predicted protein [Nematostella vectensis] gi|156208398|gb|EDO29911.1| predicted protein [Nematostella vectensis] Back     alignment and taxonomy information
>gi|390351846|ref|XP_003727754.1| PREDICTED: uncharacterized protein LOC100893920 [Strongylocentrotus purpuratus] Back     alignment and taxonomy information
>gi|57238842|ref|YP_179978.1| hypothetical protein Erum1110 [Ehrlichia ruminantium str. Welgevonden] gi|57160921|emb|CAH57826.1| hypothetical protein Erum1110 [Ehrlichia ruminantium str. Welgevonden] Back     alignment and taxonomy information
>gi|58578772|ref|YP_196984.1| hypothetical protein ERWE_CDS_01080 [Ehrlichia ruminantium str. Welgevonden] gi|58417398|emb|CAI26602.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Welgevonden] Back     alignment and taxonomy information
>gi|449678384|ref|XP_002157066.2| PREDICTED: uncharacterized protein LOC100197306 [Hydra magnipapillata] Back     alignment and taxonomy information
>gi|440897331|gb|ELR49051.1| Coagulation factor V, partial [Bos grunniens mutus] Back     alignment and taxonomy information
>gi|260785506|ref|XP_002587802.1| hypothetical protein BRAFLDRAFT_92247 [Branchiostoma floridae] gi|229272955|gb|EEN43813.1| hypothetical protein BRAFLDRAFT_92247 [Branchiostoma floridae] Back     alignment and taxonomy information
>gi|359483188|ref|XP_002269642.2| PREDICTED: putative receptor-like protein kinase At3g47110-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|291231032|ref|XP_002735469.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query113
UNIPROTKB|Q8N693406 ESX1 "Homeobox protein ESX1" [ 0.672 0.187 0.394 8.9e-09
TAIR|locus:2159873 681 PERK8 "proline-rich extensin-l 0.592 0.098 0.461 1.1e-06
ZFIN|ZDB-GENE-070912-575 3063 arhgef4 "Rho guanine nucleotid 0.752 0.027 0.388 1.1e-06
UNIPROTKB|P0DI83198 RAB34 "Ras-related protein Rab 0.654 0.373 0.364 1.8e-06
TAIR|locus:2025262373 EXT4 "extensin 4" [Arabidopsis 0.672 0.203 0.440 4e-06
TAIR|locus:2008895 744 LRX1 "AT1G12040" [Arabidopsis 0.690 0.104 0.402 6.6e-06
TAIR|locus:2026925 708 PERK9 "proline-rich extensin-l 0.681 0.108 0.417 7.3e-06
ZFIN|ZDB-GENE-070209-271 1546 zgc:158327 "zgc:158327" [Danio 0.734 0.053 0.297 2.6e-05
TAIR|locus:2095462 1018 AT3G28550 [Arabidopsis thalian 0.725 0.080 0.397 2.6e-05
ZFIN|ZDB-GENE-041014-324 740 prg4b "proteoglycan 4b" [Danio 0.867 0.132 0.387 3.7e-05
UNIPROTKB|Q8N693 ESX1 "Homeobox protein ESX1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
 Score = 139 (54.0 bits), Expect = 8.9e-09, P = 8.9e-09
 Identities = 30/76 (39%), Positives = 43/76 (56%)

Query:    14 PPMSVVLASPQMSVVLASPPMSVVLASPPMSVVLASPPMSVVLASPPISVVLASPPMSVV 73
             PPM+ V   P M+ V   PPM+ V   PPM+ V   PPM+ V   PP++ +   PPM+ +
Sbjct:   298 PPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPL 357

Query:    74 LASPPMSVVLASPPMS 89
                PPM+ +   PPM+
Sbjct:   358 PPGPPMAPLPPGPPMA 373


GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA
GO:0006351 "transcription, DNA-dependent" evidence=IEA
GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA
GO:0043565 "sequence-specific DNA binding" evidence=IDA
GO:0005634 "nucleus" evidence=IDA
GO:0005737 "cytoplasm" evidence=IDA
GO:0051726 "regulation of cell cycle" evidence=IDA
TAIR|locus:2159873 PERK8 "proline-rich extensin-like receptor kinase 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070912-575 arhgef4 "Rho guanine nucleotide exchange factor (GEF) 4" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P0DI83 RAB34 "Ras-related protein Rab-34, isoform NARR" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
TAIR|locus:2025262 EXT4 "extensin 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008895 LRX1 "AT1G12040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026925 PERK9 "proline-rich extensin-like receptor kinase 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070209-271 zgc:158327 "zgc:158327" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
TAIR|locus:2095462 AT3G28550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041014-324 prg4b "proteoglycan 4b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00