Psyllid ID: psy9623

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-----
Protein Sequence
MSSLSLPRVLQPRKTSLELERETFEKFQSASIGKAVNSQETPVKEKHFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHASLPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVTPVVILPDPPSTSDPGDSMSPVTGDLVDISHTSSQNASNAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWHAAQYISRSCRRVRFRAAQKTRR
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccHHHccccccHHHHHHHHHHHHHHHcccccccccccHHccccccccccHHHHHHHHHHHHHHHHHHHHccccccccEEcHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHcccccEEEEcccccccccccccccccccccccccccHccccEEEEEccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
msslslprvlqprktSLELERETFEKFQSAsigkavnsqetpvkekhfhlkdgYGKLIYQYTRLLLGkldfhrrnpgfpgnlilSQSEldrigendinnYFQMSVEMFDYLDEILALQAAVFGsldmsrsnsmtssgqcrlsplipciqdssqLYDFCVKILFKLHaslpseilAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLiqvptlpetppnlliqaelgsyvtpvvilpdppstsdpgdsmspvtgdlvdishtssqnasnailgtfhdksstiFWQCasrlplmeNVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWHAAQYISRSCRRVRFRAAQKTRR
Flexible Loop (DISEMBL)
msslslprvlqprktslelERETFEkfqsasigkavnsqetpvkekHFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHASLPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVTPVVILPDPPSTSDPGDSMSPVTGDLVDISHTSSQNASNAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWHAaqyisrscrrvrfraaqktrr
Low Complexity Region (SEG)
MSSLSLPRVLQPRKTSLELERETFEKFQSASIGKAVNSQETPVKEKHFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHASLPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVTPVVILpdppstsdpgdsmspVTGDLVDISHTSSQNASNAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWHAAQYISRSCRRVRFRAAQKTRR
Disordered region (IsUnstruct)
*********************************************KHFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFGSL*************CRLSPLIPCIQDSSQLYDFCVKILFKLHASLPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVTPVVIL*********************************AILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWHAAQYISRSCRRVRF********
Disordered Region (DISOPRED)
*SSLSLPRVLQPRKTSLELERETFEKFQSAS*****************HLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFGSLDM******T**GQCRLSPLIPCIQDSSQLYDFCVKILFKLHASLPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPN*******************************************S*******************FWQC*SR**L*ENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWHAAQYISRSCRRVRF********
Disordered Region (DISEMBL)
MSSLSLPRVLQPRKTSLELERETFEKFQSASIGKAVNSQETPVKEKHFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFGSLDM***********CRLSPLIPCIQDSSQLYDFCVKILFKLHASLPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVTPVVILPDP*********MSPVTGDLVDISHTSSQNASNAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWHAAQYISRSCRRVR*********
Disordered Region (DISPRO)
************RKTSLELERETFEKFQSASIGKAVNSQETPVKEKHFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHASLPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVTPVVILPDP********************S***SQNASNAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWHAAQYISRSCRRVRFRAAQK***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSLSLPRVLQPRKTSLELERETFEKFQSASIGKAVNSQETPVKEKHFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHASLPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVTPVVILPDPPSTSDPGDSMSPVTGDLVDISHTSSQNASNAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWHAAQYISRSCRRVRFRAAQKTRR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	355	2.2.26 [Sep-21-2011]
O00291	1037	Huntingtin-interacting pr	yes	N/A	0.822	0.281	0.388	2e-62
Q8VD75	1029	Huntingtin-interacting pr	yes	N/A	0.701	0.241	0.454	1e-61
Q9JKY5	1068	Huntingtin-interacting pr	no	N/A	0.633	0.210	0.386	3e-51
O75146	1068	Huntingtin-interacting pr	no	N/A	0.518	0.172	0.497	1e-50
Q02328	927	Huntington interacting pr	yes	N/A	0.591	0.226	0.427	4e-45
Q9P6L5	1102	Endocytosis protein end4	yes	N/A	0.498	0.160	0.314	4e-18
P33338	968	Protein SLA2 OS=Saccharom	yes	N/A	0.456	0.167	0.263	9e-14

>sp|O00291|HIP1_HUMAN Huntingtin-interacting protein 1 OS=Homo sapiens GN=HIP1 PE=1 SV=5

 Score =  239 bits (611), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/381 (38%), Positives = 202/381 (53%), Gaps = 89/381 (23%)

Query: 6   LPRVLQPRKTSLELE---RETFEKFQSASIGKAVNSQETPVKEKH--------------- 47
           LP+VL  R     LE   RE+FE+ Q+ SI KA+N+QE  VKEKH               
Sbjct: 15  LPKVLSRRGVGAGLEAAERESFERTQTVSINKAINTQEVAVKEKHARTCILGTHHEKGAQ 74

Query: 48  ------------------------FH--LKDG---------------------YGKLIYQ 60
                                   FH  L+DG                     +G L   
Sbjct: 75  TFWSVVNRLPLSSNAVLCWKFCHVFHKLLRDGHPNVLKDSLRYRNELSDMSRMWGHLSEG 134

Query: 61  YTR-------LLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDE 113
           Y +       LL  K+++H +NP FPGNL +S  +LD  GE+D+NN+FQ++VEMFDYL+ 
Sbjct: 135 YGQLCSIYLKLLRTKMEYHTKNPRFPGNLQMSDRQLDEAGESDVNNFFQLTVEMFDYLEC 194

Query: 114 ILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHASLPSEI 173
            L L   VF SLDMSRS S+T++GQCRL+PLI  I D S LYD+ VK+LFKLH+ LP++ 
Sbjct: 195 ELNLFQTVFNSLDMSRSVSVTAAGQCRLAPLIQVILDCSHLYDYTVKLLFKLHSCLPADT 254

Query: 174 LAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVTPVVIL 233
           L GHR RF++QF++L+  +  SS LQYFK LIQ+P LPE PPN L  + L  +++PVV++
Sbjct: 255 LQGHRDRFMEQFTKLKDLFYRSSNLQYFKRLIQIPQLPENPPNFLRASALSEHISPVVVI 314

Query: 234 PDPPSTSDPGDSMSPV--TGDLVDISHTSSQNASNAILGTFHDKSSTIFWQCASRLPL-- 289
           P   S+ D      PV    DL+D+   S QN        F +K   IF    S  P   
Sbjct: 315 PAEASSPDS----EPVLEKDDLMDMD-ASQQN-------LFDNKFDDIFGSSFSSDPFNF 362

Query: 290 -MENVIVAWKFCHVLHKILRE 309
             +N +   +  H++ ++ RE
Sbjct: 363 NSQNGVNKDEKDHLIERLYRE 383

Plays a role in clathrin-mediated endocytosis and trafficking. Involved in regulating AMPA receptor trafficking in the central nervous system in an NMDA-dependent manner. Enhances androgen receptor (AR)-mediated transcription. May act as a proapoptotic protein that induces cell death by acting through the intrinsic apoptosis pathway. Binds 3-phosphoinositides (via ENTH domain). May act through the ENTH domain to promote cell survival by stabilizing receptor tyrosine kinases following ligand-induced endocytosis. May play a functional role in the cell filament networks. May be required for differentiation, proliferation, and/or survival of somatic and germline progenitors.
Homo sapiens (taxid: 9606)

>sp|Q8VD75|HIP1_MOUSE Huntingtin-interacting protein 1 OS=Mus musculus GN=Hip1 PE=1 SV=2

 Score =  237 bits (605), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 121/266 (45%), Positives = 172/266 (64%), Gaps = 17/266 (6%)

Query: 49  HLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMF 108
           HL +GYG+L   Y +LL  ++++H +NP FPGNL +S  +LD  GE+D+NN+FQ++VEMF
Sbjct: 130 HLSEGYGQLCSIYLKLLRTRMEYHTKNPRFPGNLQMSDRQLDEAGESDVNNFFQLTVEMF 189

Query: 109 DYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHAS 168
           DYL+  L L   VF SLDMSRS S+T++GQCRL+PLI  I D S LYD+ VK+LFKLH+ 
Sbjct: 190 DYLECELNLFQTVFNSLDMSRSVSVTTAGQCRLAPLIQVILDCSHLYDYTVKLLFKLHSC 249

Query: 169 LPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVT 228
           LP++ L GHR RF++QF++L+  +  SS LQYFK LIQ+P LPE PPN L  + L  +++
Sbjct: 250 LPADTLQGHRDRFMEQFTKLKDLFQRSSNLQYFKRLIQIPQLPENPPNFLRASALSEHIS 309

Query: 229 PVVILPDPPSTSDPGDSMSPV--TGDLVDISHTSSQNASNAILGTFHDKSSTIFWQCASR 286
           PVV++P   S+ D      PV    DL+D+      +AS   L  F +K   +F    S 
Sbjct: 310 PVVVIPAEVSSPDS----EPVLEKDDLMDM------DASQQTL--FDNKFDDVFGSSLSS 357

Query: 287 LPL---MENVIVAWKFCHVLHKILRE 309
            P     +N +   +  H++ ++ RE
Sbjct: 358 DPFNFNNQNGVNKDEKDHLIERLYRE 383

Plays a role in clathrin-mediated endocytosis and trafficking. Involved in regulating AMPA receptor trafficking in the central nervous system in an NMDA-dependent manner. Enhances androgen receptor (AR)-mediated transcription. May act as a proapoptotic protein that induces cell death by acting through the intrinsic apoptosis pathway. Binds 3-phosphoinositides (via ENTH domain). May act through the ENTH domain to promote cell survival by stabilizing receptor tyrosine kinases following ligand-induced endocytosis. May play a functional role in the cell filament networks. May be required for differentiation, proliferation, and/or survival of somatic and germline progenitors.

Mus musculus (taxid: 10090)

>sp|Q9JKY5|HIP1R_MOUSE Huntingtin-interacting protein 1-related protein OS=Mus musculus GN=Hip1r PE=1 SV=2

 Score =  202 bits (514), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/295 (38%), Positives = 155/295 (52%), Gaps = 70/295 (23%)

Query: 8   RVLQPRKT-SLELERETFEKFQSASIGKAVNSQETPVKEKHFH----------------- 49
           RVL  R   SLE ERE F+K Q+ SI KA+NSQE PVKEKH                   
Sbjct: 10  RVLSRRPGHSLEAEREQFDKTQAISISKAINSQEAPVKEKHARRIILGTHHEKGAFTFWS 69

Query: 50  ------------------------LKDGYGKLIYQY------------------------ 61
                                   L+DG+  +++ Y                        
Sbjct: 70  YAIGLPLSSSSILSWKFCHVLHKVLRDGHPNVLHDYQRYRSNIREIGDLWGHLRDQYGHL 129

Query: 62  ----TRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILAL 117
               T+LLL K+ FH ++P FP  L ++   L++    D+NN FQ++VEMFDY+D  L L
Sbjct: 130 VNIYTKLLLTKISFHLKHPQFPAGLEVTDEVLEKAAGTDVNNIFQLTVEMFDYMDCELKL 189

Query: 118 QAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHASLPSEILAGH 177
             +VF  L+ + + S  SSGQCRL+PLI  IQD S LY + VK++FKLH+ LP++ L GH
Sbjct: 190 SESVFRQLNTAIAVSQMSSGQCRLAPLIQVIQDCSHLYHYTVKLMFKLHSCLPADTLQGH 249

Query: 178 RSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVTPVVI 232
           R RF +QF  L+ F+  +S + YFK LIQ+P LPE PPN L  + L  ++ PVV+
Sbjct: 250 RDRFHEQFHSLKNFFRRASDMLYFKRLIQIPRLPEGPPNFLRASALAEHIKPVVV 304

Component of clathrin-coated pits and vesicles, that may link the endocytic machinery to the actin cytoskeleton. Binds 3-phosphoinositides (via ENTH domain). May act through the ENTH domain to promote cell survival by stabilizing receptor tyrosine kinases following ligand-induced endocytosis.

Mus musculus (taxid: 10090)

>sp|O75146|HIP1R_HUMAN Huntingtin-interacting protein 1-related protein OS=Homo sapiens GN=HIP1R PE=1 SV=2

 Score =  200 bits (508), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 92/185 (49%), Positives = 126/185 (68%)

Query: 49  HLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMF 108
           HL D YG+L+  YT+LLL K+ FH ++P FP  L ++   L++    D+NN FQ++VEMF
Sbjct: 121 HLHDRYGQLVNVYTKLLLTKISFHLKHPQFPAGLEVTDEVLEKAAGTDVNNIFQLTVEMF 180

Query: 109 DYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHAS 168
           DY+D  L L  +VF  L+ + + S  SSGQCRL+PLI  IQD S LY + VK+LFKLH+ 
Sbjct: 181 DYMDCELKLSESVFRQLNTAIAVSQMSSGQCRLAPLIQVIQDCSHLYHYTVKLLFKLHSC 240

Query: 169 LPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVT 228
           LP++ L GHR RF +QF  LR F+  +S + YFK LIQ+P LPE PPN L  + L  ++ 
Sbjct: 241 LPADTLQGHRDRFHEQFHSLRNFFRRASDMLYFKRLIQIPRLPEGPPNFLRASALAEHIK 300

Query: 229 PVVIL 233
           PVV++
Sbjct: 301 PVVVI 305

Component of clathrin-coated pits and vesicles, that may link the endocytic machinery to the actin cytoskeleton. Binds 3-phosphoinositides (via ENTH domain). May act through the ENTH domain to promote cell survival by stabilizing receptor tyrosine kinases following ligand-induced endocytosis.

Homo sapiens (taxid: 9606)

>sp|Q02328|SLAP2_CAEEL Huntington interacting protein related 1 OS=Caenorhabditis elegans GN=hipr-1 PE=3 SV=3

 Score =  182 bits (462), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 91/213 (42%), Positives = 134/213 (62%), Gaps = 3/213 (1%)

Query: 53  GYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLD 112
           GYG  I  Y +LL  ++ FH + P  PG L L+ S+L  + E D++N F+M+++M D +D
Sbjct: 110 GYGPCIESYCKLLHDRVTFHNKYPVVPGKLDLNDSQLKTL-EGDLDNMFEMTIDMLDQMD 168

Query: 113 EILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHASLPSE 172
            +L LQ  V+  ++  R NS+   GQC LSPLI  I D+S+ YD+ VK++FKLH+ +P +
Sbjct: 169 ALLVLQDRVYEMMNSLRWNSLIPQGQCMLSPLIIAILDTSKFYDYLVKMIFKLHSQVPPD 228

Query: 173 ILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVTPVVI 232
            L GHRSRF   F + ++FY  SS LQYFK+L+ +PTLP   PN L Q++L SY TP   
Sbjct: 229 ALEGHRSRFRTIFERTKKFYEESSNLQYFKYLVSIPTLPSHAPNFLQQSDLESYRTPHAY 288

Query: 233 LPDPPSTSDPGDSMSPVTGDLVDISHTSSQNAS 265
           L      S+ G S++   G+L++++    Q AS
Sbjct: 289 L--HSEGSEDGTSLNGHDGELLNLAEAEPQQAS 319

Caenorhabditis elegans (taxid: 6239)

>sp|Q9P6L5|SLA2_SCHPO Endocytosis protein end4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=end4 PE=1 SV=2

 Score = 92.4 bits (228), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 17/194 (8%)

Query: 53  GYGKLIYQYTRLLLGKLDFHRRNPGFPGNL----ILSQSELDRIGENDINNYFQMSVEMF 108
           GY  LI  Y   LL KL FH ++P F G       +S  ++D     D N  ++   +M 
Sbjct: 113 GYSDLIRDYVDYLLDKLSFHAQHPEFNGTFEYKEYISLRQVD-----DPNEGYETVYDMM 167

Query: 109 DYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHAS 168
           +  D I   Q  +F +   S  N      +CR++ L+P +Q+S  +Y F   +L  L+++
Sbjct: 168 NLQDHIDEFQKQLFSNFKRSNKN------ECRIAALVPLVQESYGIYRFLTSMLRALYST 221

Query: 169 LPS-EILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSY- 226
           + + E L   + R+  Q  +LRQFY   S L+Y   LI VP LP  PP+L     +    
Sbjct: 222 VDAPETLEPLKHRYKSQHHRLRQFYADCSNLRYLTSLISVPRLPHDPPDLEGDDNIPDLP 281

Query: 227 VTPVVILPDPPSTS 240
             P  I P P   S
Sbjct: 282 KRPASIAPQPTGAS 295

Required for cellular morphogenesis and polarization of the cortical cytoskeleton. Required for establishment of new polarized growth zones where it acts in actin organization. Involved plasma membrane internalization and is essential for fluid-phase endocytosis.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P33338|SLA2_YEAST Protein SLA2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SLA2 PE=1 SV=5

 Score = 78.2 bits (191), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 9/171 (5%)

Query: 53  GYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLD 112
            Y KLI +Y R L+ KLDFH  + GF       +  +  +  +D +  ++  +++    D
Sbjct: 101 SYSKLIREYVRYLVLKLDFHAHHRGFNNGTFEYEEYVSLVSVSDPDEGYETILDLMSLQD 160

Query: 113 EILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHASLP-- 170
            +      +F S+   R N+     +C++S LIP I +S  +Y F   +L  +H  L   
Sbjct: 161 SLDEFSQIIFASIQSERRNT-----ECKISALIPLIAESYGIYKFITSMLRAMHRQLNDA 215

Query: 171 --SEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLI 219
                L   + R+  Q ++L +FY   S+++Y   L+ +P LP   P++ +
Sbjct: 216 EGDAALQPLKERYELQHARLFEFYADCSSVKYLTTLVTIPKLPVDAPDVFL 266

Required for cellular morphogenesis and polarization of the cortical cytoskeleton. It might act in concert with proteins such as CDC42 and CDC43 to limit the region of cortical patch formation to the cortex of the bud. Required for the accumulation and/or maintenance of plasma membrane H(+)-ATPase on the cell surface.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	355
242007590	992	Huntingtin-interacting protein, putative	0.735	0.263	0.532	2e-87
328699660	885	PREDICTED: huntingtin-interacting protei	0.605	0.242	0.675	8e-87
328699658	894	PREDICTED: huntingtin-interacting protei	0.605	0.240	0.675	1e-86
241848452	978	huntingtin interacting protein, putative	0.712	0.258	0.525	1e-84
427788577	994	Putative actin-binding protein [Rhipicep	0.766	0.273	0.494	5e-84
427788579	994	Putative actin-binding protein [Rhipicep	0.766	0.273	0.494	5e-84
345481800	967	PREDICTED: huntingtin-interacting protei	0.707	0.259	0.512	2e-83
345481802	955	PREDICTED: huntingtin-interacting protei	0.577	0.214	0.652	2e-80
307180268	907	Huntingtin-interacting protein 1 [Campon	0.583	0.228	0.641	4e-80
91091170	964	PREDICTED: similar to huntingtin interac	0.580	0.213	0.650	9e-80

>gi|242007590|ref|XP_002424620.1| Huntingtin-interacting protein, putative [Pediculus humanus corporis] gi|212508071|gb|EEB11882.1| Huntingtin-interacting protein, putative [Pediculus humanus corporis]

 Score =  328 bits (842), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 179/336 (53%), Positives = 210/336 (62%), Gaps = 75/336 (22%)

Query: 1   MSSLSLPRVLQPRKTSLELERETFEKFQSASIGKAVNSQETPVKEKH--------FHLKD 52
           M+SL +PRVLQ RKTSLELERE FEK QS SI KA+N+ E+PVKEKH        F  K 
Sbjct: 1   MTSLPIPRVLQQRKTSLELERENFEKSQSISINKAINNHESPVKEKHVRSTIIGTFREKG 60

Query: 53  G------YGKLIYQYTRLL--------------------------------LGKL----- 69
           G        KL  Q  R++                                LGKL     
Sbjct: 61  GKTFWLVVSKLPLQDNRIVAWKFCHVLHKVLREGHPQVVVHSQKHREMIQDLGKLWCHLR 120

Query: 70  ------------------DFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYL 111
                             DFHRRNP FP NL++S+ EL+ IGENDINNYFQMSVEMFDY+
Sbjct: 121 EGYGKLIQHYTQFLLTKLDFHRRNPRFPANLVVSEEELESIGENDINNYFQMSVEMFDYM 180

Query: 112 DEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHASLPS 171
           D+IL+LQ+AVFGSL+MSR NSM SSGQC+L+PLIPCIQDSS+LYD+ VKILFKLH+SLP 
Sbjct: 181 DDILSLQSAVFGSLNMSRCNSMMSSGQCKLAPLIPCIQDSSRLYDYSVKILFKLHSSLPP 240

Query: 172 EILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVTPVV 231
           + L GHR RFLKQF  LR FY  +S LQYFKHLIQ+P LP  PPN LI+AEL +YVTPVV
Sbjct: 241 DTLIGHRERFLKQFEILRDFYQAASNLQYFKHLIQIPLLPHNPPNFLIEAELRTYVTPVV 300

Query: 232 ILPDPPSTSDPGDSMSPVTGDLVDIS--HTSSQNAS 265
           +LP+ P      D M  V  D  D +  +T S NA+
Sbjct: 301 VLPEDPEQ----DQMDGVLIDHSDFNSVNTDSVNAT 332

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328699660|ref|XP_003241007.1| PREDICTED: huntingtin-interacting protein 1-like isoform 2 [Acyrthosiphon pisum]

 Score =  326 bits (836), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 152/225 (67%), Positives = 185/225 (82%), Gaps = 10/225 (4%)

Query: 49  HLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMF 108
           HLKDGYGKLI QY +LLL KLDFHRRNPGFPGNL+LS+ +L RIG+ND+NNYFQM VEMF
Sbjct: 109 HLKDGYGKLIQQYCQLLLTKLDFHRRNPGFPGNLVLSEEDLCRIGDNDVNNYFQMCVEMF 168

Query: 109 DYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHAS 168
           DY+DEIL LQ+A+FGSLDMSRSNSMTS GQCRL+PL+PCI DS+QLYD CVKILFK+HA+
Sbjct: 169 DYIDEILGLQSAIFGSLDMSRSNSMTSHGQCRLAPLLPCILDSTQLYDLCVKILFKMHAT 228

Query: 169 LPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVT 228
           LP ++L+GHR RFL+QF+ LRQFY+ SS LQYFK LIQ+P LPE PPN L+QAEL +YVT
Sbjct: 229 LPPDLLSGHRKRFLRQFTILRQFYLGSSNLQYFKTLIQIPLLPENPPNFLVQAELSTYVT 288

Query: 229 -PVVILPDPPSTSDPGDSMSPVTGDLVDI----SHTSSQNASNAI 268
              ++LPD     DP +S S + G+LVD+    S TSS+ +  ++
Sbjct: 289 QAAIVLPDE----DPSES-SSMIGELVDLGIGNSVTSSETSQRSL 328

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328699658|ref|XP_001949271.2| PREDICTED: huntingtin-interacting protein 1-like isoform 1 [Acyrthosiphon pisum]

 Score =  326 bits (836), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 152/225 (67%), Positives = 185/225 (82%), Gaps = 10/225 (4%)

Query: 49  HLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMF 108
           HLKDGYGKLI QY +LLL KLDFHRRNPGFPGNL+LS+ +L RIG+ND+NNYFQM VEMF
Sbjct: 118 HLKDGYGKLIQQYCQLLLTKLDFHRRNPGFPGNLVLSEEDLCRIGDNDVNNYFQMCVEMF 177

Query: 109 DYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHAS 168
           DY+DEIL LQ+A+FGSLDMSRSNSMTS GQCRL+PL+PCI DS+QLYD CVKILFK+HA+
Sbjct: 178 DYIDEILGLQSAIFGSLDMSRSNSMTSHGQCRLAPLLPCILDSTQLYDLCVKILFKMHAT 237

Query: 169 LPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVT 228
           LP ++L+GHR RFL+QF+ LRQFY+ SS LQYFK LIQ+P LPE PPN L+QAEL +YVT
Sbjct: 238 LPPDLLSGHRKRFLRQFTILRQFYLGSSNLQYFKTLIQIPLLPENPPNFLVQAELSTYVT 297

Query: 229 -PVVILPDPPSTSDPGDSMSPVTGDLVDI----SHTSSQNASNAI 268
              ++LPD     DP +S S + G+LVD+    S TSS+ +  ++
Sbjct: 298 QAAIVLPDE----DPSES-SSMIGELVDLGIGNSVTSSETSQRSL 337

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|241848452|ref|XP_002415638.1| huntingtin interacting protein, putative [Ixodes scapularis] gi|215509852|gb|EEC19305.1| huntingtin interacting protein, putative [Ixodes scapularis]

 Score =  319 bits (818), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 172/327 (52%), Positives = 207/327 (63%), Gaps = 74/327 (22%)

Query: 1   MSSLSLPRVLQPRKT-SLELERETFEKFQSASIGKAVNSQETPVKEKH--------FH-- 49
           MS+L LP+ L  R+T SL+ E+E FEK Q+ SI KAVNSQE PVKEKH        FH  
Sbjct: 1   MSTLPLPKALTQRRTNSLDQEKENFEKSQAISISKAVNSQECPVKEKHVRSTIIGTFHEK 60

Query: 50  -------------------------------LKDGY-----------------GK----- 56
                                          L++GY                 GK     
Sbjct: 61  GAHTFWSIVLKLPLQENPIVCWKFCHVVHKLLREGYHRVIPDSLRYRQTFLEFGKLWGLL 120

Query: 57  ------LIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDY 110
                 LI  Y RL++ KL+FH RNP FPGNL++S   LD IGE D+N +FQ++ EMFDY
Sbjct: 121 KEGYGKLIQCYCRLIVAKLNFHYRNPKFPGNLVVSDDALDDIGEGDVNVFFQVTCEMFDY 180

Query: 111 LDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHASLP 170
           +DEILALQ AVFGSLDM+RSNSMT+SGQCRL+PLIPCIQDSSQLYD+ VK+LFKLHA+LP
Sbjct: 181 MDEILALQQAVFGSLDMARSNSMTNSGQCRLAPLIPCIQDSSQLYDYIVKVLFKLHAALP 240

Query: 171 SEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVTPV 230
           ++ LAGHR RFLKQF  L+QFY++S  LQYFKHLIQVP LPE PPN L+ ++L S+V+PV
Sbjct: 241 ADTLAGHRERFLKQFKLLQQFYLSSVNLQYFKHLIQVPLLPENPPNFLVASDLSSHVSPV 300

Query: 231 VILPDPPSTSDPGDSMSPVTGDLVDIS 257
           VIL  PP    P +   PV   LVD S
Sbjct: 301 VIL--PPQNETPEN--EPVDATLVDTS 323

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427788577|gb|JAA59740.1| Putative actin-binding protein [Rhipicephalus pulchellus]

 Score =  317 bits (812), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 171/346 (49%), Positives = 209/346 (60%), Gaps = 74/346 (21%)

Query: 1   MSSLSLPRVLQPRKT-SLELERETFEKFQSASIGKAVNSQETPVKEKH--------FH-- 49
           MS+L LP+ L  R+T SL+ E+E FEK Q+ SI KAVNSQE PVKEKH        FH  
Sbjct: 1   MSTLPLPKALTQRRTNSLDQEKENFEKSQAVSISKAVNSQECPVKEKHVRSLIIGTFHEK 60

Query: 50  -------------------------------LKDGY------------------------ 54
                                          L++GY                        
Sbjct: 61  GAHTFWSLVMKLPLQENPIVCWKCCHVVHKLLREGYHRAIPDSLRYRQTFLEYGKLWGLL 120

Query: 55  ----GKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDY 110
               GKLI  Y RL++ KL+FH RNP FPGNL ++   LD IGE D+N +FQ++ EMFDY
Sbjct: 121 KEGYGKLIQCYCRLIVAKLNFHYRNPKFPGNLTVTDEALDDIGEGDVNVFFQLTCEMFDY 180

Query: 111 LDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHASLP 170
           +DEILALQ AVFGSLDM+RSNSMT+SGQCRL+PLIPCIQDSSQLYD+ VK+LFKLHA+LP
Sbjct: 181 MDEILALQQAVFGSLDMARSNSMTNSGQCRLAPLIPCIQDSSQLYDYTVKVLFKLHAALP 240

Query: 171 SEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVTPV 230
            + L GHR RFLKQF  L+QFY+ S  LQYFKHLIQVP LPE PPN LI ++L S+V+PV
Sbjct: 241 GDTLLGHRERFLKQFKLLQQFYLNSVNLQYFKHLIQVPLLPEKPPNFLIASDLSSHVSPV 300

Query: 231 VILPDPPSTSDPGDSMSPVTGDLVDISHTSSQNASNAILGTFHDKS 276
           V+L  PP    P +     T  LVD S  +  +    + G   D++
Sbjct: 301 VVL--PPQNETPENETVDAT--LVDTSVPAPPDKLQQMFGAAGDRA 342

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427788579|gb|JAA59741.1| Putative actin-binding protein [Rhipicephalus pulchellus]

 Score =  317 bits (812), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 171/346 (49%), Positives = 209/346 (60%), Gaps = 74/346 (21%)

Query: 1   MSSLSLPRVLQPRKT-SLELERETFEKFQSASIGKAVNSQETPVKEKH--------FH-- 49
           MS+L LP+ L  R+T SL+ E+E FEK Q+ SI KAVNSQE PVKEKH        FH  
Sbjct: 1   MSTLPLPKALTQRRTNSLDQEKENFEKSQAVSISKAVNSQECPVKEKHVRSLIIGTFHEK 60

Query: 50  -------------------------------LKDGY------------------------ 54
                                          L++GY                        
Sbjct: 61  GAHTFWSLVMKLPLQENPIVCWKCCHVVHKLLREGYHRAIPDSLRYRQTFLEYGKLWGLL 120

Query: 55  ----GKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDY 110
               GKLI  Y RL++ KL+FH RNP FPGNL ++   LD IGE D+N +FQ++ EMFDY
Sbjct: 121 KEGYGKLIQCYCRLIVAKLNFHYRNPKFPGNLTVTDEALDDIGEGDVNVFFQLTCEMFDY 180

Query: 111 LDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHASLP 170
           +DEILALQ AVFGSLDM+RSNSMT+SGQCRL+PLIPCIQDSSQLYD+ VK+LFKLHA+LP
Sbjct: 181 MDEILALQQAVFGSLDMARSNSMTNSGQCRLAPLIPCIQDSSQLYDYTVKVLFKLHAALP 240

Query: 171 SEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVTPV 230
            + L GHR RFLKQF  L+QFY+ S  LQYFKHLIQVP LPE PPN LI ++L S+V+PV
Sbjct: 241 GDTLLGHRERFLKQFKLLQQFYLNSVNLQYFKHLIQVPLLPEKPPNFLIASDLSSHVSPV 300

Query: 231 VILPDPPSTSDPGDSMSPVTGDLVDISHTSSQNASNAILGTFHDKS 276
           V+L  PP    P +     T  LVD S  +  +    + G   D++
Sbjct: 301 VVL--PPQNETPENETVDAT--LVDTSVPAPPDKLQQMFGAAGDRA 342

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345481800|ref|XP_001604846.2| PREDICTED: huntingtin-interacting protein 1 isoform 1 [Nasonia vitripennis]

 Score =  315 bits (808), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 169/330 (51%), Positives = 206/330 (62%), Gaps = 79/330 (23%)

Query: 1   MSSLSLPRVLQPRKTSLELERETFEKFQSASIGKAVNSQETPVKEKHFH----------- 49
           M+SLSLPRVLQ RKTSL+LERE     QS SI KAVN  ET VKEKH             
Sbjct: 1   MASLSLPRVLQQRKTSLDLERE--HHVQSTSIAKAVNPSETRVKEKHVRIAIIGTFKEKG 58

Query: 50  ------------------------------LKDGYGKLIY-------------------- 59
                                         L++G+ ++I+                    
Sbjct: 59  ANIFWTYVLRQQLQENRIVAWKFCHVLHKILREGHPRVIHDSQRHRGKLEDIGKLWQHLR 118

Query: 60  -QYTRL-------LLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYL 111
            +Y RL       L+ KLDFH+RNP  PGNL ++  EL+ IGENDIN YFQM+VEMFDY+
Sbjct: 119 DEYGRLIHLYIRLLITKLDFHKRNPRMPGNLQVTTEELEAIGENDINVYFQMTVEMFDYM 178

Query: 112 DEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHASLPS 171
           D+IL LQ AVFGSLD+SRSNSMT  GQCRL+PLIPC+QD+SQLYD+CVK+LFKLH++LP+
Sbjct: 179 DDILNLQQAVFGSLDLSRSNSMTPCGQCRLAPLIPCVQDASQLYDYCVKMLFKLHSALPA 238

Query: 172 EILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVTPVV 231
           + LAGHR RFLKQF  L+ FY T   + YFKHLI +PTLPE PPN LIQ+ELG+YVTPVV
Sbjct: 239 DTLAGHRDRFLKQFRDLKSFYNTVMHMHYFKHLITIPTLPENPPNFLIQSELGTYVTPVV 298

Query: 232 ILPDPPSTSDPGDSMSPVTGDLVDISHTSS 261
           +LP      +P D+     G L+D S T+S
Sbjct: 299 VLP----PEEPLDA----EGSLIDTSDTNS 320

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345481802|ref|XP_003424458.1| PREDICTED: huntingtin-interacting protein 1 isoform 2 [Nasonia vitripennis]

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 139/213 (65%), Positives = 170/213 (79%), Gaps = 8/213 (3%)

Query: 49  HLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMF 108
           HL+D YG+LI+ Y RLL+ KLDFH+RNP  PGNL ++  EL+ IGENDIN YFQM+VEMF
Sbjct: 104 HLRDEYGRLIHLYIRLLITKLDFHKRNPRMPGNLQVTTEELEAIGENDINVYFQMTVEMF 163

Query: 109 DYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHAS 168
           DY+D+IL LQ AVFGSLD+SRSNSMT  GQCRL+PLIPC+QD+SQLYD+CVK+LFKLH++
Sbjct: 164 DYMDDILNLQQAVFGSLDLSRSNSMTPCGQCRLAPLIPCVQDASQLYDYCVKMLFKLHSA 223

Query: 169 LPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVT 228
           LP++ LAGHR RFLKQF  L+ FY T   + YFKHLI +PTLPE PPN LIQ+ELG+YVT
Sbjct: 224 LPADTLAGHRDRFLKQFRDLKSFYNTVMHMHYFKHLITIPTLPENPPNFLIQSELGTYVT 283

Query: 229 PVVILPDPPSTSDPGDSMSPVTGDLVDISHTSS 261
           PVV+LP      +P D+     G L+D S T+S
Sbjct: 284 PVVVLP----PEEPLDA----EGSLIDTSDTNS 308

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307180268|gb|EFN68301.1| Huntingtin-interacting protein 1 [Camponotus floridanus]

 Score =  304 bits (778), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 143/223 (64%), Positives = 170/223 (76%), Gaps = 16/223 (7%)

Query: 49  HLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMF 108
           HL++GYG+LI  YTRLL+ KLD+H+RNP  PGNL ++  EL+ IGENDIN YFQMSVEMF
Sbjct: 51  HLREGYGRLIQLYTRLLITKLDYHKRNPRLPGNLQVTSEELEAIGENDINVYFQMSVEMF 110

Query: 109 DYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHAS 168
           DY+D+IL LQ AVFGSLDMSRSNSMT  GQCRL+PLIPCIQD+SQLYD CVKILFKLH +
Sbjct: 111 DYMDDILNLQHAVFGSLDMSRSNSMTPCGQCRLAPLIPCIQDASQLYDCCVKILFKLHGA 170

Query: 169 LPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVT 228
           LP++ LAGHR RF KQF +L+ FY T   +QYFKHLI +P+LPE PPN LIQAEL +YVT
Sbjct: 171 LPADTLAGHRDRFSKQFHELKSFYNTIKHMQYFKHLITIPSLPENPPNFLIQAELRTYVT 230

Query: 229 PVVILPDPPS------------TSDPGDSMSPVTGDLVDISHT 259
           P+V+LP   S            TSD G      TGD +D ++T
Sbjct: 231 PIVVLPPEESIDHETAIENLIDTSDTG----SFTGDQLDSTNT 269

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91091170|ref|XP_971489.1| PREDICTED: similar to huntingtin interacting protein 1 [Tribolium castaneum] gi|270013124|gb|EFA09572.1| hypothetical protein TcasGA2_TC011686 [Tribolium castaneum]

 Score =  303 bits (776), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 138/212 (65%), Positives = 167/212 (78%), Gaps = 6/212 (2%)

Query: 49  HLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMF 108
           HLK+GYGK+I  YT LL+ KLDFHR+NP FPG+L +S  EL+ IG NDINNYFQM+VEMF
Sbjct: 118 HLKEGYGKMIRLYTSLLMTKLDFHRKNPRFPGHLGVSHEELESIGGNDINNYFQMTVEMF 177

Query: 109 DYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHAS 168
           DYLD I+ LQAAVFGSLDM+RSNSMTS+GQCRL+PLIPCIQD+S+LYD+CVKILFKLH +
Sbjct: 178 DYLDNIIDLQAAVFGSLDMARSNSMTSAGQCRLAPLIPCIQDASKLYDYCVKILFKLHFA 237

Query: 169 LPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVT 228
           LP ++L+GHR RFLKQF QL+ FY  +S LQYFK LI +P LPE PPN LIQ++L +YVT
Sbjct: 238 LPPDLLSGHRQRFLKQFKQLKSFYQNTSNLQYFKDLIAIPPLPENPPNFLIQSDLRTYVT 297

Query: 229 PVVILPDPPSTSDPGDSMSPVTGDLVDISHTS 260
             V++P  P      +      G L+D S TS
Sbjct: 298 QEVVVPQEPEEEHVTE------GSLIDTSETS 323

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	355
ZFIN|ZDB-GENE-010328-15	1048	hip1 "huntingtin interacting p	0.577	0.195	0.536	1.3e-63
UNIPROTKB|E1C6I0	1010	HIP1 "Uncharacterized protein"	0.521	0.183	0.567	5.9e-63
UNIPROTKB|E1C5D5	1037	HIP1 "Uncharacterized protein"	0.521	0.178	0.567	7.2e-63
UNIPROTKB|O00291	1037	HIP1 "Huntingtin-interacting p	0.707	0.242	0.446	2.3e-61
UNIPROTKB|F1MWF0	1037	HIP1 "Uncharacterized protein"	0.521	0.178	0.562	5.8e-61
MGI|MGI:1099804	1029	Hip1 "huntingtin interacting p	0.521	0.179	0.545	9.6e-61
UNIPROTKB|G3V8Y8	1030	Hip1 "Protein Hip1" [Rattus no	0.521	0.179	0.545	9.7e-61
UNIPROTKB|F1PB24	981	HIP1 "Uncharacterized protein"	0.597	0.216	0.511	4.2e-58
UNIPROTKB|F1RKC0	998	HIP1 "Uncharacterized protein"	0.639	0.227	0.478	1e-57
UNIPROTKB|F1LML7	1069	Hip1r "Protein Hip1r" [Rattus	0.521	0.173	0.491	1.3e-56

ZFIN|ZDB-GENE-010328-15 hip1 "huntingtin interacting protein 1" [Danio rerio (taxid:7955)]

 Score = 571 (206.1 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
 Identities = 111/207 (53%), Positives = 144/207 (69%)

Query:    49 HLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMF 108
             HL +GYGKL   Y +LL+ K++FH +NP FPGNL +S  +LD  GEND+NN+FQ++VEMF
Sbjct:   130 HLSEGYGKLCSIYLKLLITKMEFHIKNPRFPGNLQMSNRQLDEAGENDVNNFFQLTVEMF 189

Query:   109 DYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHAS 168
             DYL+  L L   VF SLDMSRS S+T++GQCRL+PLI  I DSS LYD+ VK+LFKLH+ 
Sbjct:   190 DYLECELNLFLGVFSSLDMSRSVSVTAAGQCRLAPLIQVILDSSHLYDYTVKLLFKLHSC 249

Query:   169 LPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVT 228
             LP++ L GHR RF +QF +L+  +  SS LQYFK LIQ+P LPE PPN L  + L  +++
Sbjct:   250 LPADTLQGHRDRFQEQFKKLKSLFYRSSNLQYFKRLIQIPQLPENPPNFLRASALSEHIS 309

Query:   229 PVVILXXXXXXXXXXXXXXXVTGDLVD 255
             PVV++                T DLVD
Sbjct:   310 PVVVIPAEASSPESEHVVE--TEDLVD 334

GO:0003779 "actin binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0009790 "embryo development" evidence=IMP

UNIPROTKB|E1C6I0 HIP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 564 (203.6 bits), Expect = 5.9e-63, Sum P(2) = 5.9e-63
 Identities = 105/185 (56%), Positives = 138/185 (74%)

Query:    49 HLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMF 108
             HL +GYG+L   Y +LL  K++FH +NP FPGNL +S  +LD  GEND+NN+FQ++VEMF
Sbjct:   125 HLSEGYGQLCSIYLKLLRTKMEFHTKNPRFPGNLQMSDRQLDEAGENDVNNFFQLTVEMF 184

Query:   109 DYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHAS 168
             DYL+  L L   VF SLDMSRS S+T++GQCRL+PLI  I D S LYD+ VK+LFKLH+ 
Sbjct:   185 DYLECELNLFQTVFSSLDMSRSVSVTAAGQCRLAPLIQVILDCSHLYDYTVKLLFKLHSC 244

Query:   169 LPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVT 228
             LP++ L GHR RFL+QF +L+  +  SS LQYFK LIQ+P LPE PPN L  + L  +++
Sbjct:   245 LPADTLQGHRDRFLEQFRKLKDLFYRSSNLQYFKRLIQIPQLPENPPNFLRASALSEHIS 304

Query:   229 PVVIL 233
             PVV++
Sbjct:   305 PVVVI 309

GO:0003779 "actin binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|E1C5D5 HIP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 564 (203.6 bits), Expect = 7.2e-63, Sum P(2) = 7.2e-63
 Identities = 105/185 (56%), Positives = 138/185 (74%)

Query:    49 HLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMF 108
             HL +GYG+L   Y +LL  K++FH +NP FPGNL +S  +LD  GEND+NN+FQ++VEMF
Sbjct:   129 HLSEGYGQLCSIYLKLLRTKMEFHTKNPRFPGNLQMSDRQLDEAGENDVNNFFQLTVEMF 188

Query:   109 DYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHAS 168
             DYL+  L L   VF SLDMSRS S+T++GQCRL+PLI  I D S LYD+ VK+LFKLH+ 
Sbjct:   189 DYLECELNLFQTVFSSLDMSRSVSVTAAGQCRLAPLIQVILDCSHLYDYTVKLLFKLHSC 248

Query:   169 LPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVT 228
             LP++ L GHR RFL+QF +L+  +  SS LQYFK LIQ+P LPE PPN L  + L  +++
Sbjct:   249 LPADTLQGHRDRFLEQFRKLKDLFYRSSNLQYFKRLIQIPQLPENPPNFLRASALSEHIS 308

Query:   229 PVVIL 233
             PVV++
Sbjct:   309 PVVVI 313

GO:0003779 "actin binding" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0006919 "activation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA

GO:0030136 "clathrin-coated vesicle" evidence=IEA

GO:0030276 "clathrin binding" evidence=IEA

GO:0035091 "phosphatidylinositol binding" evidence=IEA

GO:0048260 "positive regulation of receptor-mediated endocytosis" evidence=IEA

GO:0048268 "clathrin coat assembly" evidence=IEA

UNIPROTKB|O00291 HIP1 "Huntingtin-interacting protein 1" [Homo sapiens (taxid:9606)]

 Score = 557 (201.1 bits), Expect = 2.3e-61, Sum P(2) = 2.3e-61
 Identities = 118/264 (44%), Positives = 165/264 (62%)

Query:    49 HLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMF 108
             HL +GYG+L   Y +LL  K+++H +NP FPGNL +S  +LD  GE+D+NN+FQ++VEMF
Sbjct:   130 HLSEGYGQLCSIYLKLLRTKMEYHTKNPRFPGNLQMSDRQLDEAGESDVNNFFQLTVEMF 189

Query:   109 DYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHAS 168
             DYL+  L L   VF SLDMSRS S+T++GQCRL+PLI  I D S LYD+ VK+LFKLH+ 
Sbjct:   190 DYLECELNLFQTVFNSLDMSRSVSVTAAGQCRLAPLIQVILDCSHLYDYTVKLLFKLHSC 249

Query:   169 LPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVT 228
             LP++ L GHR RF++QF++L+  +  SS LQYFK LIQ+P LPE PPN L  + L  +++
Sbjct:   250 LPADTLQGHRDRFMEQFTKLKDLFYRSSNLQYFKRLIQIPQLPENPPNFLRASALSEHIS 309

Query:   229 PVVILXXXXXXXXXXXXXXXVTGDLVDISHTSSQNASNAILGTFHDKSSTIFWQCASRLP 288
             PVV++                  DL+D+   S QN        F +K   IF    S  P
Sbjct:   310 PVVVIPAEASSPDSEPVLEK--DDLMDMD-ASQQNL-------FDNKFDDIFGSSFSSDP 359

Query:   289 L---MENVIVAWKFCHVLHKILRE 309
                  +N +   +  H++ ++ RE
Sbjct:   360 FNFNSQNGVNKDEKDHLIERLYRE 383

GO:0003779 "actin binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0030665 "clathrin-coated vesicle membrane" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0006917 "induction of apoptosis" evidence=IDA

GO:0048260 "positive regulation of receptor-mediated endocytosis" evidence=IMP

GO:0030136 "clathrin-coated vesicle" evidence=IDA

GO:0048268 "clathrin coat assembly" evidence=IDA

GO:0035091 "phosphatidylinositol binding" evidence=IDA

GO:0005200 "structural constituent of cytoskeleton" evidence=TAS

GO:0016020 "membrane" evidence=TAS

GO:0005856 "cytoskeleton" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006915 "apoptotic process" evidence=IDA

GO:0006919 "activation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IDA

GO:0030276 "clathrin binding" evidence=IDA

GO:0042981 "regulation of apoptotic process" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|F1MWF0 HIP1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 562 (202.9 bits), Expect = 5.8e-61, Sum P(2) = 5.8e-61
 Identities = 104/185 (56%), Positives = 140/185 (75%)

Query:    49 HLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMF 108
             HL +GYG+L   Y +LL  K+++H +NP FPGNL +S  +L+  GE+D+NN+FQ++VEMF
Sbjct:   130 HLSEGYGQLCSIYLKLLRTKMEYHTKNPRFPGNLHMSDRQLEEAGESDVNNFFQLTVEMF 189

Query:   109 DYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHAS 168
             DYL+  L L   VF SLDMSRS S+T++GQCRL+PLI  I D S LYD+ VK+LFKLH+ 
Sbjct:   190 DYLECELNLFQTVFNSLDMSRSVSVTTAGQCRLAPLIQVILDCSHLYDYAVKLLFKLHSC 249

Query:   169 LPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVT 228
             LP++ L GHR RFL+QF++L+ F+  SS LQYFK LIQ+P LPE PPN L  + L  +V+
Sbjct:   250 LPADTLQGHRDRFLEQFTKLKDFFYRSSNLQYFKRLIQIPQLPENPPNFLRASALSEHVS 309

Query:   229 PVVIL 233
             PVV++
Sbjct:   310 PVVVI 314

GO:0048268 "clathrin coat assembly" evidence=IEA

GO:0048260 "positive regulation of receptor-mediated endocytosis" evidence=IEA

GO:0035091 "phosphatidylinositol binding" evidence=IEA

GO:0030276 "clathrin binding" evidence=IEA

GO:0030136 "clathrin-coated vesicle" evidence=IEA

GO:0006919 "activation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

MGI|MGI:1099804 Hip1 "huntingtin interacting protein 1" [Mus musculus (taxid:10090)]

 Score = 554 (200.1 bits), Expect = 9.6e-61, Sum P(2) = 9.6e-61
 Identities = 101/185 (54%), Positives = 139/185 (75%)

Query:    49 HLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMF 108
             HL +GYG+L   Y +LL  ++++H +NP FPGNL +S  +LD  GE+D+NN+FQ++VEMF
Sbjct:   130 HLSEGYGQLCSIYLKLLRTRMEYHTKNPRFPGNLQMSDRQLDEAGESDVNNFFQLTVEMF 189

Query:   109 DYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHAS 168
             DYL+  L L   VF SLDMSRS S+T++GQCRL+PLI  I D S LYD+ VK+LFKLH+ 
Sbjct:   190 DYLECELNLFQTVFNSLDMSRSVSVTTAGQCRLAPLIQVILDCSHLYDYTVKLLFKLHSC 249

Query:   169 LPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVT 228
             LP++ L GHR RF++QF++L+  +  SS LQYFK LIQ+P LPE PPN L  + L  +++
Sbjct:   250 LPADTLQGHRDRFMEQFTKLKDLFQRSSNLQYFKRLIQIPQLPENPPNFLRASALSEHIS 309

Query:   229 PVVIL 233
             PVV++
Sbjct:   310 PVVVI 314

GO:0003779 "actin binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006897 "endocytosis" evidence=IDA

GO:0006915 "apoptotic process" evidence=ISO

GO:0006917 "induction of apoptosis" evidence=ISO

GO:0006919 "activation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=ISO

GO:0008219 "cell death" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0030136 "clathrin-coated vesicle" evidence=ISO

GO:0030154 "cell differentiation" evidence=IEA

GO:0030276 "clathrin binding" evidence=ISO

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0035091 "phosphatidylinositol binding" evidence=ISO

GO:0042981 "regulation of apoptotic process" evidence=ISO

GO:0048260 "positive regulation of receptor-mediated endocytosis" evidence=ISO;IMP

GO:0048268 "clathrin coat assembly" evidence=ISO

UNIPROTKB|G3V8Y8 Hip1 "Protein Hip1" [Rattus norvegicus (taxid:10116)]

 Score = 554 (200.1 bits), Expect = 9.7e-61, Sum P(2) = 9.7e-61
 Identities = 101/185 (54%), Positives = 139/185 (75%)

Query:    49 HLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMF 108
             HL +GYG+L   Y +LL  ++++H +NP FPGNL +S  +LD  GE+D+NN+FQ++VEMF
Sbjct:   130 HLSEGYGQLCSIYLKLLRTRMEYHTKNPRFPGNLQMSDRQLDEAGESDVNNFFQLTVEMF 189

Query:   109 DYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHAS 168
             DYL+  L L   VF SLDMSRS S+T++GQCRL+PLI  I D S LYD+ VK+LFKLH+ 
Sbjct:   190 DYLECELNLFQTVFNSLDMSRSVSVTTAGQCRLAPLIQVILDCSHLYDYTVKLLFKLHSC 249

Query:   169 LPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVT 228
             LP++ L GHR RF++QF++L+  +  SS LQYFK LIQ+P LPE PPN L  + L  +++
Sbjct:   250 LPADTLQGHRDRFMEQFTKLKDLFQRSSNLQYFKRLIQIPQLPENPPNFLRASALSEHIS 309

Query:   229 PVVIL 233
             PVV++
Sbjct:   310 PVVVI 314

GO:0003779 "actin binding" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0006919 "activation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA

GO:0030136 "clathrin-coated vesicle" evidence=IEA

GO:0030276 "clathrin binding" evidence=IEA

GO:0035091 "phosphatidylinositol binding" evidence=IEA

GO:0048260 "positive regulation of receptor-mediated endocytosis" evidence=IEA

GO:0048268 "clathrin coat assembly" evidence=IEA

UNIPROTKB|F1PB24 HIP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 561 (202.5 bits), Expect = 4.2e-58, Sum P(2) = 4.2e-58
 Identities = 110/215 (51%), Positives = 147/215 (68%)

Query:    49 HLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMF 108
             HL +GYG+L   Y RLL  K+++H +NP FPGNL +S  +LD  GE+D+NN+FQ++VEMF
Sbjct:    91 HLSEGYGQLCSIYLRLLRTKMEYHTKNPRFPGNLQMSDRQLDEAGESDVNNFFQLTVEMF 150

Query:   109 DYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHAS 168
             DYL+  L L   VF SLDMSRS S+T++GQCRL+PLI  I D S LYD+ VK+LFKLH+ 
Sbjct:   151 DYLECELNLFQTVFNSLDMSRSVSVTTAGQCRLAPLIQVILDCSHLYDYTVKLLFKLHSC 210

Query:   169 LPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVT 228
             LP++ L GHR RF++QF++L+  +  SS LQYFK LIQ+P LPE PPN L  + L  +++
Sbjct:   211 LPADTLQGHRDRFMEQFTKLKDLFYRSSNLQYFKRLIQIPQLPENPPNFLRASALSEHIS 270

Query:   229 PVVILXXXXXXXXXXXXXXXVTGDLVDISHTSSQN 263
             PVV++                  DLVD+   S QN
Sbjct:   271 PVVVIPAEASSPDSEPVLEK--DDLVDMD-ASQQN 302

GO:0005543 "phospholipid binding" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|F1RKC0 HIP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 558 (201.5 bits), Expect = 1.0e-57, Sum P(2) = 1.0e-57
 Identities = 110/230 (47%), Positives = 152/230 (66%)

Query:    49 HLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMF 108
             HL +GYG+L   Y  LL  K+++H +NP FPGNL +S  +LD  GE+D+NN+FQ++VEMF
Sbjct:    91 HLSEGYGQLCSTYLTLLRTKMEYHTKNPRFPGNLQMSDRQLDEAGESDVNNFFQLTVEMF 150

Query:   109 DYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHAS 168
             DYL+  L L   VF SLDMSRS S+T++GQCRL+PLI  I D S LYD+ VK+LFKLH+ 
Sbjct:   151 DYLECELNLFQTVFNSLDMSRSVSVTTAGQCRLAPLIQVILDCSHLYDYTVKLLFKLHSC 210

Query:   169 LPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVT 228
             LP++ L GHR RF++QF++L+  +  SS LQYFK LIQ+P LPE PPN L  + L  +++
Sbjct:   211 LPADTLQGHRDRFMEQFTKLKDLFYRSSNLQYFKRLIQIPQLPENPPNFLRASALSEHIS 270

Query:   229 PVVILXXXXXXXXXXXXXXXVTGDLVDISHTSSQNASNAILGTFHDKSST 278
             PVV++                  DL+D+   S QN+ ++        SS+
Sbjct:   271 PVVVIPAEASSPDSEPVSEK--DDLMDMD-ASQQNSFDSKFDDIFGSSSS 317

GO:0048268 "clathrin coat assembly" evidence=IEA

GO:0048260 "positive regulation of receptor-mediated endocytosis" evidence=IEA

GO:0035091 "phosphatidylinositol binding" evidence=IEA

GO:0030276 "clathrin binding" evidence=IEA

GO:0030136 "clathrin-coated vesicle" evidence=IEA

GO:0006919 "activation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|F1LML7 Hip1r "Protein Hip1r" [Rattus norvegicus (taxid:10116)]

 Score = 481 (174.4 bits), Expect = 1.3e-56, Sum P(3) = 1.3e-56
 Identities = 91/185 (49%), Positives = 126/185 (68%)

Query:    49 HLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMF 108
             HL+D YG L+  YT+LLL K+ FH ++P FP  L ++   L++    D+NN FQ++VEMF
Sbjct:   121 HLRDQYGHLVNIYTKLLLTKISFHLKHPQFPAGLEVTDEVLEKAAGTDVNNIFQLTVEMF 180

Query:   109 DYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHAS 168
             DY+D  L L  +VF  L+ + + S  SSGQCRL+PLI  IQD S LY + VK++FKLH+ 
Sbjct:   181 DYMDCELKLSESVFRQLNTAIAVSQMSSGQCRLAPLIQVIQDCSHLYHYTVKLMFKLHSC 240

Query:   169 LPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVT 228
             LP++ L GHR RF +QF  LR F+  +S + YFK LIQ+P LPE PPN L  + L  ++ 
Sbjct:   241 LPADTLQGHRDRFHEQFHSLRNFFRRASDMLYFKRLIQIPRLPEGPPNFLRASALAEHIK 300

Query:   229 PVVIL 233
             PVV++
Sbjct:   301 PVVVI 305

GO:0003779 "actin binding" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005905 "coated pit" evidence=IEA

GO:0006898 "receptor-mediated endocytosis" evidence=IEA

GO:0030136 "clathrin-coated vesicle" evidence=IEA

GO:0035091 "phosphatidylinositol binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	355
pfam07651	278	pfam07651, ANTH, ANTH domain	1e-38
pfam07651	278	pfam07651, ANTH, ANTH domain	2e-13
smart00273	127	smart00273, ENTH, Epsin N-terminal homology (ENTH)	3e-10
cd03564	117	cd03564, ANTH_AP180_CALM, ANTH domain family; comp	1e-09

>gnl|CDD|219498 pfam07651, ANTH, ANTH domain

 Score =  138 bits (349), Expect = 1e-38
 Identities = 57/186 (30%), Positives = 81/186 (43%), Gaps = 14/186 (7%)

Query: 48  FHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEM 107
             L   YG  I  Y + L  +LDFHR+ P  P      +    R    D N+ + MS  M
Sbjct: 99  MSLTWDYGAFIRAYAKYLDERLDFHRKLPRDP-TFERVEYGSLRAV-GDPNSRYTMS--M 154

Query: 108 FDYLDEILALQAAVFGSLDMS-RSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLH 166
            D LD I  LQ  +   L      N++T   +C ++ LI  I++S  LY    + +  L 
Sbjct: 155 EDLLDIIPKLQKLLDALLKCKPTGNALT--NECIIAALILLIKESFGLYGAINEGIINLL 212

Query: 167 ASLP------SEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQ 220
                     ++   G   RF+ QF +L++FY     L YF+ L  +P LP  PPNLL  
Sbjct: 213 EKFFEMSKPDADAALGIYKRFVSQFERLKEFYEVCKNLGYFRSLE-IPKLPHIPPNLLDA 271

Query: 221 AELGSY 226
            E    
Sbjct: 272 LEEHLR 277

AP180 is an endocytotic accessory proteins that has been implicated in the formation of clathrin-coated pits. The domain is involved in phosphatidylinositol 4,5-bisphosphate binding and is a universal adaptor for nucleation of clathrin coats. Length = 278

>gnl|CDD|219498 pfam07651, ANTH, ANTH domain

 Score = 69.6 bits (171), Expect = 2e-13
 Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 2/69 (2%)

Query: 267 AILGTFHD--KSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQV 324
            IL       K + +FW  + RLPL  N +VA K   ++HK+LREGHP V++E ++  + 
Sbjct: 26  EILVGTSSPAKVAALFWALSRRLPLTRNWVVALKALILVHKLLREGHPSVLQELLRARRR 85

Query: 325 ITNVGKMWH 333
           I+++ ++  
Sbjct: 86  ISSLLRISS 94

AP180 is an endocytotic accessory proteins that has been implicated in the formation of clathrin-coated pits. The domain is involved in phosphatidylinositol 4,5-bisphosphate binding and is a universal adaptor for nucleation of clathrin coats. Length = 278

>gnl|CDD|214594 smart00273, ENTH, Epsin N-terminal homology (ENTH) domain

 Score = 57.3 bits (139), Expect = 3e-10
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 268 ILGTFHDKSSTIFWQCASRLPLME--NVIVAWKFCHVLHKILREGHPHVIKESIKQAQVI 325
           I GT ++KSS           L +  N  V +K   +LH +LR G P VI E+++    I
Sbjct: 27  IQGTHNEKSSFAEIMAVLWRRLNDTKNWRVVYKALILLHYLLRNGSPRVILEALRNRNRI 86

Query: 326 TNVGKMWH 333
            N+     
Sbjct: 87  LNLSDFQD 94

Length = 127

>gnl|CDD|239622 cd03564, ANTH_AP180_CALM, ANTH domain family; composed of adaptor protein 180 (AP180), clathrin assembly lymphoid myeloid leukemia protein (CALM) and similar proteins

 Score = 54.9 bits (133), Expect = 1e-09
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 268 ILGTFHDKSST-IFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESI 319
           I GT    +S   F    SR  L  N +V  K   +LH++LREGHP  ++E +
Sbjct: 25  IAGTSSSPASIPSFASALSRRLLDRNWVVVLKALILLHRLLREGHPSFLQELL 77

A set of proteins previously designated as harboring an ENTH domain in fact contains a highly similar, yet unique module referred to as an AP180 N-terminal homology (ANTH) domain. AP180 and CALM play important roles in clathrin-mediated endocytosis. AP180 is a brain-specific clathrin-binding protein which stimulates clathrin assembly during the recycling of synaptic vesicles. The ANTH domain is structurally similar to the VHS domain and is composed of a superhelix of eight alpha helices. ANTH domains bind both inositol phospholipids and proteins, and contribute to the nucleation and formation of clathrin coats on membranes. ANTH-bearing proteins have recently been shown to function with adaptor protein-1 and GGA adaptors at the trans-Golgi network, which suggests that the ANTH domain is a universal component of the machinery for clathrin-mediated membrane budding. Length = 117

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	355
KOG0980|consensus	980		100.0
PF07651	280	ANTH: ANTH domain; InterPro: IPR011417 AP180 is an	100.0
KOG0980|consensus	980		100.0
KOG0251|consensus	491		99.84
cd03564	117	ANTH_AP180_CALM ANTH domain family; composed of ad	99.82
PF07651	280	ANTH: ANTH domain; InterPro: IPR011417 AP180 is an	99.8
smart00273	127	ENTH Epsin N-terminal homology (ENTH) domain.	99.61
cd03564	117	ANTH_AP180_CALM ANTH domain family; composed of ad	98.77
smart00273	127	ENTH Epsin N-terminal homology (ENTH) domain.	98.27
KOG0251|consensus	491		97.52
PF01417	125	ENTH: ENTH domain; InterPro: IPR001026 The ENTH (E	96.15
cd03571	123	ENTH_epsin ENTH domain, Epsin family; The epsin (E	87.77

>KOG0980|consensus

Probab=100.00  E-value=5.2e-76  Score=616.28  Aligned_cols=236  Identities=51%  Similarity=0.862  Sum_probs=221.0

Q ss_pred             hHHHHHHHHHHHhhhcCCCCCcccccc-----------------------------------------------------
Q psy9623          22 ETFEKFQSASIGKAVNSQETPVKEKHF-----------------------------------------------------   48 (355)
Q Consensus        22 ~~~~k~~~isI~KA~n~~E~p~KeKHv-----------------------------------------------------   48 (355)
                      +.|.+.|.+||+||||++|+|||+|||                                                     
T Consensus         1 ~~fd~~q~~av~KAis~~Et~~K~KH~Rt~I~gTh~eksa~~FWt~ik~~PL~~~~VltwKfchllHKvLreGHpsal~e   80 (980)
T KOG0980|consen    1 EQFDRAQLEAVQKAISKDETPPKRKHVRTIIVGTHDEKSSKIFWTTIKRQPLENHEVLTWKFCHLLHKVLREGHPSALEE   80 (980)
T ss_pred             CcchHHHHHHHHHHhccccCCCchhhhhheeeeecccccchhHHHHhhccccccchHHHHHHHHHHHHHHHcCCcchhHH
Confidence            368899999999999999999999999                                                     


Q ss_pred             ----------------ccCCCccHHHHHHHHHHHHHHhhhhcCCCCCCCccccchhhcccccCCCCchhHhHHhHhhhHH
Q psy9623          49 ----------------HLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLD  112 (355)
Q Consensus        49 ----------------~~~d~Yg~lI~~Y~klL~~KLeFH~k~~~fpG~l~~e~e~l~~~~~~D~n~~~q~~~dl~DllD  112 (355)
                                      |++||||+||+.||+||.+||+||.|||+|||+|+|+++++. ..+.|+|++||+|+|||||||
T Consensus        81 s~r~r~~i~~l~r~w~~ls~~Yg~lI~~Y~klL~~Kl~FH~k~p~FpGtle~s~~~l~-~av~D~n~~feltvdmmd~~D  159 (980)
T KOG0980|consen   81 SQRYKKWITQLGRMWGHLSDGYGPLIRAYVKLLHDKLSFHAKHPVFPGTLEYSDYQLL-TAVDDLNNGFELTVDMMDYMD  159 (980)
T ss_pred             HHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhHhhcCCCCCCCccccHHHHH-HHhccHHHHHHHHHHHHHHHH
Confidence                            888999999999999999999999999999999999986554 455599999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCcccccchhhhHhhhhhHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHH
Q psy9623         113 EILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHASLPSEILAGHRSRFLKQFSQLRQFY  192 (355)
Q Consensus       113 ~l~~LQ~~Vf~~l~~~~~~S~t~~gqcrla~Li~vI~ES~~IY~~iv~~lf~Lh~~lp~daL~g~r~RF~~Q~~~L~~FY  192 (355)
                      +|++||+.||++++++||+|++++||||++||||+|+|||+||+|+|+|||+||+++|+|+|+|||+||+.||++||+||
T Consensus       160 ~ll~lq~~vF~s~~s~r~~s~t~qgqCrlapLI~lIqds~~lY~y~vkmlfkLHs~vp~dtLeghRdRf~~qf~rLk~FY  239 (980)
T KOG0980|consen  160 SLLELQQTVFSSMNSSRWVSLTPQGQCRLAPLIPLIQDSSGLYDYLVKMLFKLHSQVPPDTLEGHRDRFHTQFERLKQFY  239 (980)
T ss_pred             HHHHHHHHHHHHhhhccccccCCCcceehhHHHHHHHhhhhHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCccccccccccCCCCCCCchhhhhccCCccCCeeeCCCCCCCCCCCCCCCCCCCCccccCCCcccc
Q psy9623         193 MTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVTPVVILPDPPSTSDPGDSMSPVTGDLVDISHTSSQN  263 (355)
Q Consensus       193 ~~cs~L~yf~sLIqiP~LP~~PPnFl~~s~l~eyv~pvv~~p~~~~~~~~~~e~~~~~~~lId~sapk~kh  263 (355)
                      ++||+|+|||+|||||+||.+||||+.++++++|++|||++|+|++..++| |+    .+++|+++..+..
T Consensus       240 ~~~S~lqYfk~LI~IP~LP~~~Pnf~~~sdl~~~~~pvv~i~~Epsp~se~-~~----~n~~~~s~~~pa~  305 (980)
T KOG0980|consen  240 ADCSNLQYFKRLIQIPTLPEDAPNFLRQSDLESYITPVVYIPSEPSPVSED-EE----MNLPDTSASTPAG  305 (980)
T ss_pred             HhcchhHHHHHHhcCCCCCCCCcccccccchhhcCCCceecCCCCCCCCCc-cc----ccccccccccccc
Confidence            999999999999999999999999999999999999999999998532222 33    8899988776654

>PF07651 ANTH: ANTH domain; InterPro: IPR011417 AP180 is an endocytotic accessory protein that has been implicated in the formation of clathrin-coated pits

Probab=100.00  E-value=3.5e-40  Score=312.24  Aligned_cols=170  Identities=32%  Similarity=0.484  Sum_probs=134.6

Q ss_pred             CccHHHHHHHHHHHHHHhhhhcCCCCCCCccccchhhcccccCCCCchhHhHHhHhhhHHHHHHHHHHHHHhcCCCCCCC
Q psy9623          53 GYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFGSLDMSRSNS  132 (355)
Q Consensus        53 ~Yg~lI~~Y~klL~~KLeFH~k~~~fpG~l~~e~e~l~~~~~~D~n~~~q~~~dl~DllD~l~~LQ~~Vf~~l~~~~~~S  132 (355)
                      +||.||+.|++||.+|+.||++++.+||+++.+++. .....++++.+  .+++++++||.++.||++|++.++|.+.+.
T Consensus       104 ~~~~~ir~Y~~yL~~rl~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~--~~~~~~~lL~~l~~lq~ll~~ll~~~~~~~  180 (280)
T PF07651_consen  104 DYSAFIRAYAKYLDERLSFHRKLKIDPGNLEREEEG-SLVSRDDPNSR--KSLDIDDLLDQLPKLQRLLDRLLDCRPRGA  180 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSS----CCCS--S------TTSHCC---C--HHHHHHHHHHHHHHHHHHHTT---GG
T ss_pred             chhHHHHHHHHHHHHHHHHHHHcccccccccccccc-ccccccCcccc--ccccHHHHHHHHHHHHHHHHHHHccccccc
Confidence            499999999999999999999999999999998754 22333444444  789999999999999999999999987665


Q ss_pred             CCCCCcccccchhhhHhhhhhHHHHHHHHHHHHhhcCCh------hHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccc
Q psy9623         133 MTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHASLPS------EILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQ  206 (355)
Q Consensus       133 ~t~~gqcrla~Li~vI~ES~~IY~~iv~~lf~Lh~~lp~------daL~g~r~RF~~Q~~~L~~FY~~cs~L~yf~sLIq  206 (355)
                      . .+|+|+++|+++||+||++||+++++.|++|+..+++      +.+.++++||.+|+++|++||+.|++++|+++++ 
T Consensus       181 ~-~~n~~~~~a~~lli~Ds~~lY~~i~~~i~~Ll~~~~~m~~~~a~~~~~i~~rf~~q~~~L~~Fy~~c~~~~~~~~~~-  258 (280)
T PF07651_consen  181 A-LNNQCVQAAFRLLIKDSFQLYKFINEGIINLLERFFEMSKPDAEKLLGIYKRFAKQTEELKEFYEWCKSLGYFRSLE-  258 (280)
T ss_dssp             G---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT--GGG--
T ss_pred             c-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCC-
Confidence            4 4599999999999999999999999999999999876      8999999999999999999999999999999998 


Q ss_pred             ccCCCCCCCchhhhhccCCccCC
Q psy9623         207 VPTLPETPPNLLIQAELGSYVTP  229 (355)
Q Consensus       207 iP~LP~~PPnFl~~s~l~eyv~p  229 (355)
                      ||+||..||+|+.+  ||+|++.
T Consensus       259 iP~l~~~p~~~l~~--lEe~l~~  279 (280)
T PF07651_consen  259 IPSLPHIPPSFLQA--LEEYLRD  279 (280)
T ss_dssp             S--GGGS-CHHCCC--CCHHHHC
T ss_pred             CCCCCCCCHHHHHH--HHHHHhc
Confidence            99999999999885  9998764

The domain is involved in phosphatidylinositol 4,5-bisphosphate binding and is a universal adaptor for nucleation of clathrin coats [, ].; GO: 0005543 phospholipid binding; PDB: 1HX8_A 3ZYM_A 1HFA_A 1HG2_A 3ZYL_B 3ZYK_A 1HG5_A 1HF8_A.

>KOG0980|consensus

Probab=100.00  E-value=1.2e-37  Score=327.84  Aligned_cols=100  Identities=37%  Similarity=0.746  Sum_probs=97.3

Q ss_pred             cccCCCcccccccceeeeeccccchhhhhhhhcccCCCCchhHHHHHHHHHHhhhccCcccHHHHHHhhhHHHHHhhhch
Q psy9623         254 VDISHTSSQNASNAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWH  333 (355)
Q Consensus       254 Id~sapk~khvR~~I~~t~~~ksa~~fw~~~~~~Pl~~~~v~~wK~~~~lHKvLreGHp~~lkes~~~~~~l~~l~r~w~  333 (355)
                      +|+++||+||||+||||||+||||.+||+.++++||++|+|+||||||++|||||||||+|++||+||++||.+|||+||
T Consensus        17 ~~Et~~K~KH~Rt~I~gTh~eksa~~FWt~ik~~PL~~~~VltwKfchllHKvLreGHpsal~es~r~r~~i~~l~r~w~   96 (980)
T KOG0980|consen   17 KDETPPKRKHVRTIIVGTHDEKSSKIFWTTIKRQPLENHEVLTWKFCHLLHKVLREGHPSALEESQRYKKWITQLGRMWG   96 (980)
T ss_pred             cccCCCchhhhhheeeeecccccchhHHHHhhccccccchHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhc
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             --------h-HHHHHHHHHHHhhhhhhhc
Q psy9623         334 --------A-AQYISRSCRRVRFRAAQKT  353 (355)
Q Consensus       334 --------~-~~yv~~l~~kl~fh~~~~~  353 (355)
                              + +.||+||..||+||.+|+.
T Consensus        97 ~ls~~Yg~lI~~Y~klL~~Kl~FH~k~p~  125 (980)
T KOG0980|consen   97 HLSDGYGPLIRAYVKLLHDKLSFHAKHPV  125 (980)
T ss_pred             cccccchHHHHHHHHHHHHHHhHhhcCCC
Confidence                    3 6899999999999999974

>KOG0251|consensus

Probab=99.84  E-value=3.5e-21  Score=197.56  Aligned_cols=198  Identities=18%  Similarity=0.208  Sum_probs=162.2

Q ss_pred             hhhHhHHHHHHHHHHHhhhcCCCCCcccccc-------------------------------------------------
Q psy9623          18 ELERETFEKFQSASIGKAVNSQETPVKEKHF-------------------------------------------------   48 (355)
Q Consensus        18 ~~e~~~~~k~~~isI~KA~n~~E~p~KeKHv-------------------------------------------------   48 (355)
                      .+-+.+..+.+.+||.|||+|.++|||+||+                                                 
T Consensus        14 ~a~v~~~~~~l~~AV~KATsh~~~ppk~k~l~~Il~~ts~~~~~i~~~v~aLs~Rl~~TrnW~VAlKsLIliH~ll~~G~   93 (491)
T KOG0251|consen   14 KASVASAGSDLEKAVVKATSHDDMPPKDKYLDEILSATSSSPASIPSCVHALSERLNKTRNWTVALKALILIHRLLKEGD   93 (491)
T ss_pred             HHHhhhhhhhHHHHHHhhccCCCCCccHHHHHHHHHHhcCCcccHHHHHHHHHHHhCCCcceeehHHHHHHHHHHHhcCc
Confidence            3444556788999999999999999999999                                                 


Q ss_pred             -----------------ccCC-------CccHHHHHHHHHHHHHHhhhhcCCCCCCCccccchhhcccccCCCCchhHhH
Q psy9623          49 -----------------HLKD-------GYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMS  104 (355)
Q Consensus        49 -----------------~~~d-------~Yg~lI~~Y~klL~~KLeFH~k~~~fpG~l~~e~e~l~~~~~~D~n~~~q~~  104 (355)
                                       .|.|       +|++|||.|++||.+|++|.+.-.     ++++-.....      .++....
T Consensus        94 ~~f~~~l~~~~~~l~lS~F~d~s~~~~~d~safVR~Ya~YLderl~~~~~~~-----~d~~~~~~~~------~k~~~~~  162 (491)
T KOG0251|consen   94 PSFEQELLSRNLILNLSDFRDKSSSLTWDMSAFVRTYALYLDERLECYRVLG-----FDIEKVKRGK------EKTKDRS  162 (491)
T ss_pred             HHHHHHHHhcccccchhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhc-----cccccccCcc------ccccccc
Confidence                             2322       389999999999999999999988     5554321111      1222233


Q ss_pred             Hh-HhhhHHHHHHHHHHHHHhcCCCCCCCCCCCCcccccchhhhHhhhhhHHHHH-------HHHHHHHhhcCChhHHHH
Q psy9623         105 VE-MFDYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFC-------VKILFKLHASLPSEILAG  176 (355)
Q Consensus       105 ~d-l~DllD~l~~LQ~~Vf~~l~~~~~~S~t~~gqcrla~Li~vI~ES~~IY~~i-------v~~lf~Lh~~lp~daL~g  176 (355)
                      .+ +..+++.+..||+.+.+.|.|.+.+++ .+|...+.++.+||+||++||+.+       +.++|+|-+.-..++|..
T Consensus       163 ~~~~~~~l~~i~~LQ~lld~ll~~~p~~~~-~~N~lI~~A~~lvvkdsf~ly~~i~~gi~~Llekffem~~~~a~~al~i  241 (491)
T KOG0251|consen  163 SKSTDKLLKTIPKLQNLLDRLLKCRPTGSA-LNNGLIIEAFELVVKDSFKLYAAINDGIINLLEKFFEMSKHDAIKALDI  241 (491)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHcCCCCchh-hcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHH
Confidence            34 556789999999999999999998866 556799999999999999999998       466788888665677776


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCccccccccccCCCCCCCchhhhhccCCccCCee
Q psy9623         177 HRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVTPVV  231 (355)
Q Consensus       177 ~r~RF~~Q~~~L~~FY~~cs~L~yf~sLIqiP~LP~~PPnFl~~s~l~eyv~pvv  231 (355)
                      + +||.+|.++|.+||..|+++-.-++ ..||.|-..|.+++.+  |+||++.+-
T Consensus       242 y-kr~~~q~e~L~~f~~~ck~~g~~r~-~~iP~l~~i~~s~l~~--lEe~l~~~~  292 (491)
T KOG0251|consen  242 Y-KRFLSQTEKLSEFLKVCKSVGVDRG-FEIPVLKRIPISLLEA--LEEHLRDVE  292 (491)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHhccccc-ccCcchhhcCHHHHHH--HHHHHhhcc
Confidence            6 9999999999999999999999777 4899999999999985  999999884

>cd03564 ANTH_AP180_CALM ANTH domain family; composed of adaptor protein 180 (AP180), clathrin assembly lymphoid myeloid leukemia protein (CALM) and similar proteins

Probab=99.82  E-value=4e-21  Score=162.35  Aligned_cols=95  Identities=25%  Similarity=0.295  Sum_probs=90.3

Q ss_pred             cccCCCcccccccceeeeec-cccchhhhhhhhcccCCCCchhHHHHHHHHHHhhhccCcccHHHHHHhhhHHHHHhhhc
Q psy9623         254 VDISHTSSQNASNAILGTFH-DKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMW  332 (355)
Q Consensus       254 Id~sapk~khvR~~I~~t~~-~ksa~~fw~~~~~~Pl~~~~v~~wK~~~~lHKvLreGHp~~lkes~~~~~~l~~l~r~w  332 (355)
                      .|+..||.||||.||.+||. +.++..||..+.++|...|.+++||+|++||++||||||+++.+++++.+||...+..|
T Consensus        11 ~~~~~pk~k~v~~ii~~t~~~~~~~~~~~~~l~~Rl~~~~w~v~~K~LillH~llr~G~~~~~~~~~~~~~~l~l~~~~~   90 (117)
T cd03564          11 HDEAPPKDKHVRKIIAGTSSSPASIPSFASALSRRLLDRNWVVVLKALILLHRLLREGHPSFLQELLSRRGWLNLSNFLD   90 (117)
T ss_pred             CCCCCCChHHHHHHHHHHcCCCCCHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhcCCHHHHHHHHHccCeeecccccc
Confidence            57889999999999999999 89999999999999999999999999999999999999999999999999999888876


Q ss_pred             h-----------hHHHHHHHHHHHhhh
Q psy9623         333 H-----------AAQYISRSCRRVRFR  348 (355)
Q Consensus       333 ~-----------~~~yv~~l~~kl~fh  348 (355)
                      +           .++|++||..|++||
T Consensus        91 ~~~~~~~~~~~~Vr~Ya~yL~~rl~~~  117 (117)
T cd03564          91 KSSSLGYGYSAFIRAYARYLDERLSFH  117 (117)
T ss_pred             CCCCCchhhhHHHHHHHHHHHHHHhcC
Confidence            6           389999999999998

A set of proteins previously designated as harboring an ENTH domain in fact contains a highly similar, yet unique module referred to as an AP180 N-terminal homology (ANTH) domain. AP180 and CALM play important roles in clathrin-mediated endocytosis. AP180 is a brain-specific clathrin-binding protein which stimulates clathrin assembly during the recycling of synaptic vesicles. The ANTH domain is structurally similar to the VHS domain and is composed of a superhelix of eight alpha helices. ANTH domains bind both inositol phospholipids and proteins, and contribute to the nucleation and formation of clathrin coats on membranes. ANTH-bearing proteins have recently been shown to function with adaptor protein-1 and GGA adaptors at the trans-Golgi network, which suggests that the ANTH domain is a universal component of the machine

>PF07651 ANTH: ANTH domain; InterPro: IPR011417 AP180 is an endocytotic accessory protein that has been implicated in the formation of clathrin-coated pits

Probab=99.80  E-value=1.5e-20  Score=178.36  Aligned_cols=100  Identities=26%  Similarity=0.496  Sum_probs=81.5

Q ss_pred             cccCCCcccccccceeeeec-cccchhhhhhhhcccCCCCchhHHHHHHHHHHhhhccCcccHHHHHHhhhHHHHHhhhc
Q psy9623         254 VDISHTSSQNASNAILGTFH-DKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMW  332 (355)
Q Consensus       254 Id~sapk~khvR~~I~~t~~-~ksa~~fw~~~~~~Pl~~~~v~~wK~~~~lHKvLreGHp~~lkes~~~~~~l~~l~r~w  332 (355)
                      .+++.||+||||.+|.+||. ++.+..||..++++|...|.+|+||+|+++||+||||||++.+++.++..|+.+++++|
T Consensus        14 ~~~~ppk~Khv~~il~~t~~~~~~~~~~~~l~~Rl~~~~~w~V~~K~Lil~H~llr~G~~~~~~~~~~~~~~~~~~~~~~   93 (280)
T PF07651_consen   14 HDEAPPKEKHVREILSATSSPESVAFLFWALSRRLPLTRNWIVALKALILLHRLLRDGHPSFLQELLRYNRRLFDLSNIW   93 (280)
T ss_dssp             SSS---HHHHHHHHHHHCSTTS-HHHHHHHHHHHCTSS-SHHHHHHHHHHHHHHHHHS-CHHHHHHHHTT-----TT---
T ss_pred             CCCCCCCHHHHHHHHHHhcCCccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcCchHHHHHHHHcccchhhhcccc
Confidence            37889999999999999999 89999999999999999999999999999999999999999999999999999999999


Q ss_pred             h--------------hHHHHHHHHHHHhhhhhhhc
Q psy9623         333 H--------------AAQYISRSCRRVRFRAAQKT  353 (355)
Q Consensus       333 ~--------------~~~yv~~l~~kl~fh~~~~~  353 (355)
                      +              .+.|..||..|+.||++++.
T Consensus        94 ~~~~~~~~~~~~~~~ir~Y~~yL~~rl~~~~~~~~  128 (280)
T PF07651_consen   94 DFDDSSSKSWDYSAFIRAYAKYLDERLSFHRKLKI  128 (280)
T ss_dssp             T---SSCHHHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             ccccCCccccchhHHHHHHHHHHHHHHHHHHHccc
Confidence            8              15799999999999999864

The domain is involved in phosphatidylinositol 4,5-bisphosphate binding and is a universal adaptor for nucleation of clathrin coats [, ].; GO: 0005543 phospholipid binding; PDB: 1HX8_A 3ZYM_A 1HFA_A 1HG2_A 3ZYL_B 3ZYK_A 1HG5_A 1HF8_A.

>smart00273 ENTH Epsin N-terminal homology (ENTH) domain

Probab=99.61  E-value=3.9e-16  Score=133.23  Aligned_cols=102  Identities=25%  Similarity=0.252  Sum_probs=94.5

Q ss_pred             cccCCCcccccccceeeeeccccchhhhhhhhcccCCCC--chhHHHHHHHHHHhhhccCcccHHHHHHhhhHHHHHhhh
Q psy9623         254 VDISHTSSQNASNAILGTFHDKSSTIFWQCASRLPLMEN--VIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKM  331 (355)
Q Consensus       254 Id~sapk~khvR~~I~~t~~~ksa~~fw~~~~~~Pl~~~--~v~~wK~~~~lHKvLreGHp~~lkes~~~~~~l~~l~r~  331 (355)
                      .|+..|+.||++.|+.+|+..+++..+|..+...+|.++  -+++||+|++||++||+|++.++.+++++..+|.+|.++
T Consensus        13 ~~~~~p~~k~~~~I~~~t~~~~~~~~~i~~~l~~Rl~~~~~w~~v~KsL~llh~ll~~G~~~~~~~~~~~~~~i~~L~~f   92 (127)
T smart00273       13 NDEWGPKGKHLREIIQGTHNEKSSFAEIMAVLWRRLNDTKNWRVVYKALILLHYLLRNGSPRVILEALRNRNRILNLSDF   92 (127)
T ss_pred             CCCCCcCHHHHHHHHHHHccCHhhHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHhcCCHHHHHHHHHhhHHHhhHhhC
Confidence            466889999999999999999899999999999998775  999999999999999999999999999999999999999


Q ss_pred             ch-----------hHHHHHHHHHHHhhhhhhhccC
Q psy9623         332 WH-----------AAQYISRSCRRVRFRAAQKTRR  355 (355)
Q Consensus       332 w~-----------~~~yv~~l~~kl~fh~~~~~~~  355 (355)
                      |.           .++|++||..+|.||..+|.-|
T Consensus        93 ~~~~~~~~d~g~~VR~ya~~L~~~l~~~~~l~~er  127 (127)
T smart00273       93 QDIDSRGKDQGANIRTYAKYLLERLEDDRRLKEER  127 (127)
T ss_pred             eecCCCCeeCcHHHHHHHHHHHHHHcCHHHHhccC
Confidence            86           3899999999999999998754

>cd03564 ANTH_AP180_CALM ANTH domain family; composed of adaptor protein 180 (AP180), clathrin assembly lymphoid myeloid leukemia protein (CALM) and similar proteins

Probab=98.77  E-value=4.3e-09  Score=89.05  Aligned_cols=22  Identities=41%  Similarity=0.712  Sum_probs=20.3

Q ss_pred             CCCccHHHHHHHHHHHHHHhhh
Q psy9623          51 KDGYGKLIYQYTRLLLGKLDFH   72 (355)
Q Consensus        51 ~d~Yg~lI~~Y~klL~~KLeFH   72 (355)
                      +.|||.||+.|++||.+|++||
T Consensus        96 ~~~~~~~Vr~Ya~yL~~rl~~~  117 (117)
T cd03564          96 GYGYSAFIRAYARYLDERLSFH  117 (117)
T ss_pred             chhhhHHHHHHHHHHHHHHhcC
Confidence            4469999999999999999998

A set of proteins previously designated as harboring an ENTH domain in fact contains a highly similar, yet unique module referred to as an AP180 N-terminal homology (ANTH) domain. AP180 and CALM play important roles in clathrin-mediated endocytosis. AP180 is a brain-specific clathrin-binding protein which stimulates clathrin assembly during the recycling of synaptic vesicles. The ANTH domain is structurally similar to the VHS domain and is composed of a superhelix of eight alpha helices. ANTH domains bind both inositol phospholipids and proteins, and contribute to the nucleation and formation of clathrin coats on membranes. ANTH-bearing proteins have recently been shown to function with adaptor protein-1 and GGA adaptors at the trans-Golgi network, which suggests that the ANTH domain is a universal component of the machine

>smart00273 ENTH Epsin N-terminal homology (ENTH) domain

Probab=98.27  E-value=6.9e-07  Score=76.31  Aligned_cols=27  Identities=30%  Similarity=0.359  Sum_probs=24.5

Q ss_pred             CCccHHHHHHHHHHHHHHhhhhcCCCC
Q psy9623          52 DGYGKLIYQYTRLLLGKLDFHRRNPGF   78 (355)
Q Consensus        52 d~Yg~lI~~Y~klL~~KLeFH~k~~~f   78 (355)
                      .|||.+|+.|+++|.++|.||++++++
T Consensus       100 ~d~g~~VR~ya~~L~~~l~~~~~l~~e  126 (127)
T smart00273      100 KDQGANIRTYAKYLLERLEDDRRLKEE  126 (127)
T ss_pred             eeCcHHHHHHHHHHHHHHcCHHHHhcc
Confidence            459999999999999999999999854

>KOG0251|consensus

Probab=97.52  E-value=8.1e-05  Score=77.61  Aligned_cols=99  Identities=17%  Similarity=0.201  Sum_probs=74.8

Q ss_pred             cccCCCcccccccceeeeecccc-c-hhhhhhhhcccCCCCchhHHHHHHHHHHhhhccCcccHHHHHHhh-----hHHH
Q psy9623         254 VDISHTSSQNASNAILGTFHDKS-S-TIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQA-----QVIT  326 (355)
Q Consensus       254 Id~sapk~khvR~~I~~t~~~ks-a-~~fw~~~~~~Pl~~~~v~~wK~~~~lHKvLreGHp~~lkes~~~~-----~~l~  326 (355)
                      .|...||.||+|.|+-+|-...+ . ..+-....|+-=..|-+|++|+|++||++|++|-|.+..+-.+..     .++.
T Consensus        34 h~~~ppk~k~l~~Il~~ts~~~~~i~~~v~aLs~Rl~~TrnW~VAlKsLIliH~ll~~G~~~f~~~l~~~~~~l~lS~F~  113 (491)
T KOG0251|consen   34 HDDMPPKDKYLDEILSATSSSPASIPSCVHALSERLNKTRNWTVALKALILIHRLLKEGDPSFEQELLSRNLILNLSDFR  113 (491)
T ss_pred             CCCCCccHHHHHHHHHHhcCCcccHHHHHHHHHHHhCCCcceeehHHHHHHHHHHHhcCcHHHHHHHHhcccccchhhhh
Confidence            46788999999999999988743 2 233334455556669999999999999999999999998866655     3333


Q ss_pred             HHh--hhch----hHHHHHHHHHHHhhhhhhh
Q psy9623         327 NVG--KMWH----AAQYISRSCRRVRFRAAQK  352 (355)
Q Consensus       327 ~l~--r~w~----~~~yv~~l~~kl~fh~~~~  352 (355)
                      +=+  ..|.    .|-|..||-.|+.+-+..+
T Consensus       114 d~s~~~~~d~safVR~Ya~YLderl~~~~~~~  145 (491)
T KOG0251|consen  114 DKSSSLTWDMSAFVRTYALYLDERLECYRVLG  145 (491)
T ss_pred             cccccccchhhHHHHHHHHHHHHHHHHHHHhc
Confidence            322  3666    3789999999999877654

>PF01417 ENTH: ENTH domain; InterPro: IPR001026 The ENTH (Epsin N-terminal homology) domain is approximately 150 amino acids in length and is always found located at the N-termini of proteins

Probab=96.15  E-value=0.002  Score=54.99  Aligned_cols=76  Identities=12%  Similarity=0.108  Sum_probs=61.9

Q ss_pred             CCcccccccceeeeeccccchhhhhhhhcc---cCCCCchhHHHHHHHHHHhhhccCcccHHHHHHhhhHHHHHhhhch
Q psy9623         258 HTSSQNASNAILGTFHDKSSTIFWQCASRL---PLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWH  333 (355)
Q Consensus       258 apk~khvR~~I~~t~~~ksa~~fw~~~~~~---Pl~~~~v~~wK~~~~lHKvLreGHp~~lkes~~~~~~l~~l~r~w~  333 (355)
                      .|..++..-|.-.|++.+++...+..+.++   .=.++..+.+|+|.+|+-+|+.|++.++.+.++|..-|+.|..+.+
T Consensus        18 gp~~~~l~eIa~~t~~~~~~~~I~~~l~kRL~~~~~k~wr~~~KaL~ll~yLl~nG~~~~~~~~~~~~~~I~~l~~f~~   96 (125)
T PF01417_consen   18 GPPGKLLAEIAQLTYNSKDCQEIMDVLWKRLSKSDGKNWRHVYKALTLLEYLLKNGSERFVDELRDHIDIIRELQDFQY   96 (125)
T ss_dssp             S--HHHHHHHHHHTTSCHHHHHHHHHHHHHHHSSTSSGHHHHHHHHHHHHHHHHHS-HHHHHHHHHTHHHHHGGGG---
T ss_pred             CcCHHHHHHHHHHHhccccHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhcceeec
Confidence            456788888889999998888888876655   3577888999999999999999999999999999999999988855

The domain forms a compact globular structure, composed of 9 alpha-helices connected by loops of varying length. The general topology is determined by three helical hairpins that are stacked consecutively with a right hand twist []. An N-terminal helix folds back, forming a deep basic groove that forms the binding pocket for the Ins(1,4,5)P3 ligand []. The ligand is coordinated by residues from surrounding alpha-helices and all three phosphates are multiply coordinated. The coordination of Ins(1,4,5)P3 suggests that ENTH is specific for particular head groups. Proteins containing this domain have been found to bind PtdIns(4,5)P2 and PtdIns(1,4,5)P3 suggesting that the domain may be a membrane interacting module. The main function of proteins containing this domain appears to be to act as accessory clathrin adaptors in endocytosis, Epsin is able to recruit and promote clathrin polymerisation on a lipid monolayer, but may have additional roles in signalling and actin regulation []. Epsin causes a strong degree of membrane curvature and tubulation, even fragmentation of membranes with a high PtdIns(4,5)P2 content. Epsin binding to membranes facilitates their deformation by insertion of the N-terminal helix into the outer leaflet of the bilayer, pushing the head groups apart. This would reduce the energy needed to curve the membrane into a vesicle, making it easier for the clathrin cage to fix and stabilise the curved membrane. This points to a pioneering role for epsin in vesicle budding as it provides both a driving force and a link between membrane invagination and clathrin polymerisation. ; PDB: 1H0A_A 1EYH_A 1EDU_A 2QY7_B 1XGW_A 2V8S_E 1VDY_A 2DCP_A 1INZ_A 3ONL_B ....

>cd03571 ENTH_epsin ENTH domain, Epsin family; The epsin (Eps15 interactor) N-terminal homology (ENTH) domain is an evolutionarily conserved protein module found primarily in proteins that participate in clathrin-mediated endocytosis

Probab=87.77  E-value=0.3  Score=42.33  Aligned_cols=74  Identities=12%  Similarity=0.078  Sum_probs=53.4

Q ss_pred             CCCcccccccceeeeeccccchhhhhhhhcccC--CCCchhHHHHHHHHHHhhhccCcccHHHHHHhhhHHHHHhh
Q psy9623         257 SHTSSQNASNAILGTFHDKSSTIFWQCASRLPL--MENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGK  330 (355)
Q Consensus       257 sapk~khvR~~I~~t~~~ksa~~fw~~~~~~Pl--~~~~v~~wK~~~~lHKvLreGHp~~lkes~~~~~~l~~l~r  330 (355)
                      .-|..+....|...|++..........+.++=.  ..+=-..+|+|.+|+=+|+.|.+.|+.+...|..-|+.|..
T Consensus        15 wGp~~~~m~eIa~~t~~~~~~~~Im~~l~kRL~~~~k~WR~vyKaL~lleyLl~nGse~vv~~~r~~~~~i~~L~~   90 (123)
T cd03571          15 WGPSGTLMAEIARATYNYVEFQEIMSMLWKRLNDKGKNWRHVYKALTLLEYLLKNGSERVVDDARENLYIIRTLKD   90 (123)
T ss_pred             CCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHhCCHHHHHHHHHhHHHHHhhcc
Confidence            344556666666777775443333333322211  45777899999999999999999999999999999999864

A set of proteins previously designated as harboring an ENTH domain in fact contains a highly similar, yet unique module referred to as an AP180 N-terminal homology (ANTH) domain. ENTH and ANTH (E/ANTH) domains are structurally similar to the VHS domain and are composed of a superhelix of eight alpha helices. E/ANTH domains bind both inositol phospholipids and proteins and contribute to the nucleation and formation of clathrin coats on membranes. ENTH domains also function in the development of membrane curvature through lipid remodeling during the formation of clathrin-coated vesicles. E/ANTH-bearing proteins have recently been shown to function with adaptor protein-1 and GGA adaptors at the trans-Golgi network, which suggests that E/ANTH domains are univ

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	355
1hx8_A	299	Synapse-enriched clathrin adaptor protein LAP; all	2e-12
3zyl_A	271	Phosphatidylinositol-binding clathrin assembly PR;	4e-10
3zym_A	310	Phosphatidylinositol-binding clathrin assembly PR	1e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04

>1hx8_A Synapse-enriched clathrin adaptor protein LAP; all alpha, alpha helices repeats, coiled-coil, endocytosis/exocytosis complex; 2.20A {Drosophila melanogaster} SCOP: a.7.8.2 a.118.9.3 Length = 299

 Score = 66.0 bits (160), Expect = 2e-12
 Identities = 32/202 (15%), Positives = 66/202 (32%), Gaps = 20/202 (9%)

Query: 27  FQSASIGKAVNSQETPVKEKHFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQ 86
           F  +S       Q+  +      +       I +Y + L  K   +R          ++ 
Sbjct: 106 FNLSSFLDKGTVQDGGMGVPGGRMGYDMSPFIRRYAKYLNEKSLSYRA---------MAF 156

Query: 87  SELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIP 146
                    +  +   M+ E    L  +  LQA +   L+    ++  S+G       + 
Sbjct: 157 DFCKVKRGKEEGSLRSMNAE--KLLKTLPVLQAQLDALLEFDCQSNDLSNG-VINMSFML 213

Query: 147 CIQDSSQLY----DFCVKILFKLHASLPSEILAGHR--SRFLKQFSQLRQFYMTSSTLQY 200
             +D  +L+    D  + +L K                 +FL +  ++ +F   +  +  
Sbjct: 214 LFRDLIRLFACYNDGIINLLEKYFDMNKKHARDALDLYKKFLVRMDRVGEFLKVAENVGI 273

Query: 201 FKHLIQVPTLPETPPNLLIQAE 222
            K    +P L + P +LL   E
Sbjct: 274 DK--GDIPDLTKAPSSLLDALE 293

>3zyl_A Phosphatidylinositol-binding clathrin assembly PR; endocytosis, endobrevin, synaptobrevin, VAMP2, VAMP3, AP180, membrane, adaptor protein; 1.70A {Rattus norvegicus} PDB: 3zyk_A 1hf8_A 1hfa_A* 1hg2_A* 1hg5_A* Length = 271

 Score = 58.7 bits (141), Expect = 4e-10
 Identities = 22/162 (13%), Positives = 59/162 (36%), Gaps = 21/162 (12%)

Query: 44  KEKHFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQM 103
            +K           I +Y+R L  K   +R+                ++          M
Sbjct: 117 LDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQVAFDFT----------KVKRGADGVMRTM 166

Query: 104 SVEMFDYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFC----- 158
           + E    L  +  +Q  +   LD + +++  ++G    +  +   +D+ +L+        
Sbjct: 167 NTE--KLLKTVPIIQNQMDALLDFNVNSNELTNG-VINAAFMLLFKDAIRLFAAYNEGII 223

Query: 159 --VKILFKLHASLPSEILAGHRSRFLKQFSQLRQFYMTSSTL 198
             ++  F +  +   E L  ++ +FL + +++ +F   +  +
Sbjct: 224 NLLEKYFDMKKNQCKEGLDIYK-KFLTRMTRISEFLKVAEQV 264

>3zym_A Phosphatidylinositol-binding clathrin assembly PR vesicle-associated membrane protein...; endocytosis, synaptobrevin, VAMP2, VAMP3, AP180; HET: PO4; 2.03A {Rattus norvegicus} Length = 310

 Score = 54.9 bits (131), Expect = 1e-08
 Identities = 25/187 (13%), Positives = 66/187 (35%), Gaps = 21/187 (11%)

Query: 44  KEKHFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQM 103
            +K           I +Y+R L  K   +R+                ++          M
Sbjct: 117 LDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQVAFDFT----------KVKRGADGVMRTM 166

Query: 104 SVEMFDYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFC----- 158
           + E    L  +  +Q  +   LD + +++  ++G    +  +   +D+ +L+        
Sbjct: 167 NTE--KLLKTVPIIQNQMDALLDFNVNSNELTNG-VINAAFMLLFKDAIRLFAAYNEGII 223

Query: 159 --VKILFKLHASLPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPN 216
             ++  F +  +   E L  ++ +FL + +++ +F   +  +   +  I           
Sbjct: 224 NLLEKYFDMKKNQCKEGLDIYK-KFLTRMTRISEFLKVAEQVGIDRGDISGSGSGHMDRV 282

Query: 217 LLIQAEL 223
             +Q+E+
Sbjct: 283 RNLQSEV 289

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.2 bits (132), Expect = 2e-08
 Identities = 59/397 (14%), Positives = 112/397 (28%), Gaps = 120/397 (30%)

Query: 1   MSSLSLPRVLQPRKTSLEL----ERETFEKFQSASIG---------KAVNSQETPVKEKH 47
           + S      L      L L      + +  F   ++          K V    +     H
Sbjct: 238 LKSKPYENCL------LVLLNVQNAKAWNAF---NLSCKILLTTRFKQVTDFLSAATTTH 288

Query: 48  FHLKDGYGKLIYQYTRLLLGK-LDF---------HRRNPGFPGNLILSQ-SELDRIGEND 96
             L      L     + LL K LD             NP       LS  +E  R G   
Sbjct: 289 ISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP-----RRLSIIAESIRDGLAT 343

Query: 97  INNY-----------FQMSVEMFD-------YLDEILAL-------QAAVFGSL--DMSR 129
            +N+            + S+ + +       +    L++          +   +  D+ +
Sbjct: 344 WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDR--LSVFPPSAHIPTILLSLIWFDVIK 401

Query: 130 SNSMTSSGQCRLSPLIPCIQDSSQ--LYDFCVKILFKLHASLPSEILAGHRSRFLKQFSQ 187
           S+ M    +     L+      S   +      I  +L   L +E  A HR   +  ++ 
Sbjct: 402 SDVMVVVNKLHKYSLVEKQPKESTISIPS----IYLELKVKLENEY-ALHR-SIVDHYNI 455

Query: 188 LRQFYMTSSTL----QYF-----KHL--IQVPTLPETPPNLL-----IQAELGSYVTPVV 231
            + F           QYF      HL  I+ P        +      ++ ++        
Sbjct: 456 PKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKI-------- 507

Query: 232 ILPDPPSTSDPGDSMSPVTGDLVDI----SH-TSSQNASNAILGTFHDKSSTIFWQCASR 286
                   S   ++   +   L  +     +   +      ++    D     F      
Sbjct: 508 -----RHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILD-----F------ 551

Query: 287 LPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQ 323
           LP +E  ++  K+  +L   L      + +E+ KQ Q
Sbjct: 552 LPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQ 588

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 6e-04
 Identities = 54/309 (17%), Positives = 99/309 (32%), Gaps = 87/309 (28%)

Query: 47  HFHLKDGYGKLIYQYTRLLLG-----KLDFHRRN-PGFPGNLILSQSELDRI-GENDINN 99
           H H+    G+  YQY  +L         +F  ++    P + ILS+ E+D I    D   
Sbjct: 4   HHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKS-ILSKEEIDHIIMSKD--- 59

Query: 100 YFQMSVEMFDYLDEIL------ALQAAVFGSLDMSRSNSMTS-SGQCRLSPLIPCIQDSS 152
               +V     L   L       +Q  V   L ++    M+    + R  P +      +
Sbjct: 60  ----AVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQR-QPSMM-----T 109

Query: 153 QLYDFCVKILFKLHASLPSEILAGHRSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPE 212
           ++Y      L+  +          + SR L+ + +LR            + L+++   P 
Sbjct: 110 RMYIEQRDRLYNDNQVFAK----YNVSR-LQPYLKLR------------QALLELR--PA 150

Query: 213 TPPNLLIQAELGSYVTPVVILPDPPSTSDPGDSMSPVTGDLVDISHTSSQNASNAILGTF 272
              N+LI   LGS                 G +   V  D+           S  +    
Sbjct: 151 --KNVLIDGVLGS-----------------GKTW--VALDVC---------LSYKVQCKM 180

Query: 273 HDKSSTIFW----QCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNV 328
             K   IFW     C S   ++E +    K  + +         H     ++   +   +
Sbjct: 181 DFK---IFWLNLKNCNSPETVLEML---QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL 234

Query: 329 GKMWHAAQY 337
            ++  +  Y
Sbjct: 235 RRLLKSKPY 243

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	355
1hx8_A	299	Synapse-enriched clathrin adaptor protein LAP; all	100.0
3zym_A	310	Phosphatidylinositol-binding clathrin assembly PR	99.95
3zyl_A	271	Phosphatidylinositol-binding clathrin assembly PR;	99.92
3zyl_A	271	Phosphatidylinositol-binding clathrin assembly PR;	99.7
3zym_A	310	Phosphatidylinositol-binding clathrin assembly PR	99.7
1hx8_A	299	Synapse-enriched clathrin adaptor protein LAP; all	99.69
1inz_A	148	EPS15-interacting portein(epsin); alpha-helix, rik	94.57
1eyh_A	144	Epsin; superhelix of helices, cell cycle; 1.56A {R	93.45
3onk_A	150	Epsin-3, ENT3; helix, protein transport; 2.09A {Sa	81.53

>1hx8_A Synapse-enriched clathrin adaptor protein LAP; all alpha, alpha helices repeats, coiled-coil, endocytosis/exocytosis complex; 2.20A {Drosophila melanogaster} SCOP: a.7.8.2 a.118.9.3

Probab=100.00  E-value=2.5e-35  Score=283.69  Aligned_cols=160  Identities=16%  Similarity=0.198  Sum_probs=134.7

Q ss_pred             CccHHHHHHHHHHHHH-HhhhhcCCCCCCCccccchhhcccccCCCCchhHhHHhHhhhHHHHHHHHHHHHHhcCCCCCC
Q psy9623          53 GYGKLIYQYTRLLLGK-LDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFGSLDMSRSN  131 (355)
Q Consensus        53 ~Yg~lI~~Y~klL~~K-LeFH~k~~~fpG~l~~e~e~l~~~~~~D~n~~~q~~~dl~DllD~l~~LQ~~Vf~~l~~~~~~  131 (355)
                      |||+||+.|++||.+| +.||..+..|      +  .+.    .+.++++...+++..+||+++.||++|++.++|.+.+
T Consensus       132 d~s~~Ir~Ya~yL~~r~~~f~~~~~d~------~--~~~----~~~~~~~~~~l~~~~lL~~l~~lQ~li~~ll~~~~~~  199 (299)
T 1hx8_A          132 DMSPFIRRYAKYLNEKSLSYRAMAFDF------C--KVK----RGKEEGSLRSMNAEKLLKTLPVLQAQLDALLEFDCQS  199 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSSCG------G--GC---------CCCTTTCCHHHHHHHHHHHHHHHHHHHTTCCCG
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhCCCc------c--ccc----cCccccchhhCCHHHHHHHHHHHHHHHHHHHCCCCCc
Confidence            3889999999999999 7899887533      2  111    1344555566677789999999999999999998876


Q ss_pred             CCCCCCcccccchhhhHhhhhhHHHHHHHHHHHH----hhcCChhHHHHHH--HHHHHHHHHHHHHHHhcCCCccccccc
Q psy9623         132 SMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKL----HASLPSEILAGHR--SRFLKQFSQLRQFYMTSSTLQYFKHLI  205 (355)
Q Consensus       132 S~t~~gqcrla~Li~vI~ES~~IY~~iv~~lf~L----h~~lp~daL~g~r--~RF~~Q~~~L~~FY~~cs~L~yf~sLI  205 (355)
                       .+.+|+|+++||++||+||++||+++++.+++|    +.....|+..+|+  +||.+|+++|++||+.|++++|++  +
T Consensus       200 -~~~~n~~~~~Al~llv~Ds~~lY~~i~~gi~~lLe~~fem~~~d~~~al~iykrf~~q~~~L~~Fy~~c~~~~~~~--~  276 (299)
T 1hx8_A          200 -NDLSNGVINMSFMLLFRDLIRLFACYNDGIINLLEKYFDMNKKHARDALDLYKKFLVRMDRVGEFLKVAENVGIDK--G  276 (299)
T ss_dssp             -GGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCG--G
T ss_pred             -ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcCC--C
Confidence             457899999999999999999999999977776    5556688888888  999999999999999999999954  8


Q ss_pred             cccCCCCCCCchhhhhccCCccCC
Q psy9623         206 QVPTLPETPPNLLIQAELGSYVTP  229 (355)
Q Consensus       206 qiP~LP~~PPnFl~~s~l~eyv~p  229 (355)
                      +||+||+.||||+.+  ||||++.
T Consensus       277 ~iP~L~~~p~~ll~~--Lee~l~~  298 (299)
T 1hx8_A          277 DIPDLTKAPSSLLDA--LEQHLAT  298 (299)
T ss_dssp             GSCCCCCCCHHHHHH--HHHHHHT
T ss_pred             CCCCCCCCCHHHHHH--HHHHHhh
Confidence            999999999999986  9999863

>3zym_A Phosphatidylinositol-binding clathrin assembly PR vesicle-associated membrane protein...; endocytosis, synaptobrevin, VAMP2, VAMP3, AP180; HET: PO4; 2.03A {Rattus norvegicus}

Probab=99.95  E-value=5.7e-28  Score=234.03  Aligned_cols=178  Identities=13%  Similarity=0.177  Sum_probs=130.1

Q ss_pred             HHHHHHHhhhcCCCCCcccccc----------------------------------------------------------
Q psy9623          27 FQSASIGKAVNSQETPVKEKHF----------------------------------------------------------   48 (355)
Q Consensus        27 ~~~isI~KA~n~~E~p~KeKHv----------------------------------------------------------   48 (355)
                      +...||.||||+.|+||||||+                                                          
T Consensus        28 ~l~~aV~KATs~~~~pPk~Khv~~il~~T~~~~~~~~~i~~~L~~Rl~~~~w~vv~KaLivlH~llreG~~~~l~~~~~~  107 (310)
T 3zym_A           28 AVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFIQYLASR  107 (310)
T ss_dssp             HHHHHHHHHTCSSSSCCCHHHHHHHHHHHHCTTSCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHC
T ss_pred             HHHHHHHhcCcCCCCCCChhHHHHHHHHHccCCCcHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHhcCCHHHHHHHHhC
Confidence            4677999999999999999999                                                          


Q ss_pred             -------ccCC-------CccHHHHHHHHHHHHHHh-hhhcCCCCCCCccccchhhcccccCCCCchhHhHHhHhhhHHH
Q psy9623          49 -------HLKD-------GYGKLIYQYTRLLLGKLD-FHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDE  113 (355)
Q Consensus        49 -------~~~d-------~Yg~lI~~Y~klL~~KLe-FH~k~~~fpG~l~~e~e~l~~~~~~D~n~~~q~~~dl~DllD~  113 (355)
                             +|.|       |||+||+.|++||.+|+. ||..++.|.+.             .+.++++..++++..+++.
T Consensus       108 ~~~~~Ls~f~d~~~~~g~~~~~~Ir~Ya~yL~~Rl~~f~~~~~d~~~~-------------~~~~~~~~r~~~~~~Ll~~  174 (310)
T 3zym_A          108 NTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQVAFDFTKV-------------KRGADGVMRTMNTEKLLKT  174 (310)
T ss_dssp             SCCCCCTTCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCTTTS-------------CCSTTSHHHHCCHHHHHHH
T ss_pred             CCeeecccccCCCCcCcccccHHHHHHHHHHHHHHHHHHHhCCCcccc-------------cCCCCCccccCCHHHHHHH
Confidence                   3332       388999999999999999 88888876421             1124566677788889999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCCCcccccchhhhHhhhhhHHHHHHHHHHHHhhc---CC-hhHHHHH--HHHHHHHHHH
Q psy9623         114 ILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHAS---LP-SEILAGH--RSRFLKQFSQ  187 (355)
Q Consensus       114 l~~LQ~~Vf~~l~~~~~~S~t~~gqcrla~Li~vI~ES~~IY~~iv~~lf~Lh~~---lp-~daL~g~--r~RF~~Q~~~  187 (355)
                      ++.||+.|++.++|.+.+.. .+|.|+++||.|+++||++||+++++.+-.|-..   ++ .|+..++  .+||.+|+++
T Consensus       175 l~~lQ~lid~ll~~~~~~~~-~~N~l~~~A~~llv~ds~~lY~~inegii~lLe~ffem~~~da~~al~iykrf~~Q~e~  253 (310)
T 3zym_A          175 VPIIQNQMDALLDFNVNSNE-LTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMTR  253 (310)
T ss_dssp             HHHHHHHHHHHHTSCCCGGG-CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999987744 6789999999999999999999998743333222   11 3444444  5999999999


Q ss_pred             HHHHHHhcCCCccccccccccCCCCCCCchhhh
Q psy9623         188 LRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQ  220 (355)
Q Consensus       188 L~~FY~~cs~L~yf~sLIqiP~LP~~PPnFl~~  220 (355)
                      |.+||+.|+++. ++++ +||+||++||+.+.+
T Consensus       254 L~~Fy~~ck~l~-l~~~-~iP~L~~~p~d~l~~  284 (310)
T 3zym_A          254 ISEFLKVAEQVG-IDRG-DISGSGSGHMDRVRN  284 (310)
T ss_dssp             HHHHHHHHHHTC--------------------C
T ss_pred             HHHHHHHHHHcC-CCCC-CCCCCCcccchHHHH
Confidence            999999999999 7887 999999999998764

>3zyl_A Phosphatidylinositol-binding clathrin assembly PR; endocytosis, endobrevin, synaptobrevin, VAMP2, VAMP3, AP180, membrane, adaptor protein; 1.70A {Rattus norvegicus} PDB: 3zyk_A 1hf8_A 1hfa_A* 1hg2_A* 1hg5_A*

Probab=99.92  E-value=9.3e-25  Score=208.09  Aligned_cols=165  Identities=15%  Similarity=0.184  Sum_probs=134.0

Q ss_pred             HHHHHHHHhhhcCCCCCcccccc---------------------------------------------------------
Q psy9623          26 KFQSASIGKAVNSQETPVKEKHF---------------------------------------------------------   48 (355)
Q Consensus        26 k~~~isI~KA~n~~E~p~KeKHv---------------------------------------------------------   48 (355)
                      .+..+||.||||+.|+||||||+                                                         
T Consensus        27 s~l~~aV~KATs~~~~~Pk~Khv~~il~~T~~~~~~~~~~~~~L~~Rl~~~~w~v~~KaLivlH~llreG~~~~l~~~~~  106 (271)
T 3zyl_A           27 SAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFIQYLAS  106 (271)
T ss_dssp             HHHHHHHHHHTCSSSSCCCHHHHHHHHHHHHSTTSCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred             hHHHHHHHhcCCCCCCCCCHHHHHHHHHHHccCCCcHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhcCCHHHHHHHHh
Confidence            45678999999999999999999                                                         


Q ss_pred             --------ccCC-------CccHHHHHHHHHHHHHHh-hhhcCCCCCCCccccchhhcccccCCCCchhHhHHhHhhhHH
Q psy9623          49 --------HLKD-------GYGKLIYQYTRLLLGKLD-FHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLD  112 (355)
Q Consensus        49 --------~~~d-------~Yg~lI~~Y~klL~~KLe-FH~k~~~fpG~l~~e~e~l~~~~~~D~n~~~q~~~dl~DllD  112 (355)
                              +|.|       |||+||+.|++||.+|+. ||..++.|++.             .+.++++..++++..+|+
T Consensus       107 ~~~~~~Ls~f~d~~~~~~~~~s~~Ir~Ya~yL~eRl~~f~~~~~d~~~~-------------k~~~~~~~r~~~~~~Ll~  173 (271)
T 3zyl_A          107 RNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQVAFDFTKV-------------KRGADGVMRTMNTEKLLK  173 (271)
T ss_dssp             CSCCCCCTTCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTS-------------CCSTTSHHHHCCHHHHHH
T ss_pred             CCCeechhccCCCCCCCcccccHHHHHHHHHHHHHHHHHHHhCCCcccc-------------CCCCCCccccCCHHHHHH
Confidence                    3433       388999999999999997 99999987652             113456767778889999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCcccccchhhhHhhhhhHHHHHHHHHHHHhhcC---C-hhHHHHH--HHHHHHHHH
Q psy9623         113 EILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCVKILFKLHASL---P-SEILAGH--RSRFLKQFS  186 (355)
Q Consensus       113 ~l~~LQ~~Vf~~l~~~~~~S~t~~gqcrla~Li~vI~ES~~IY~~iv~~lf~Lh~~l---p-~daL~g~--r~RF~~Q~~  186 (355)
                      .++.||+.|++.++|.+.+.. .+|.|+++||.|+++||++||+++++.+-.|-...   + .|+..++  .+||.+|++
T Consensus       174 ~l~~lQ~lld~ll~~~~~~~~-~~N~li~~A~~lLv~es~~lY~~in~gii~lLe~ffem~~~da~~aleiykrf~~Q~~  252 (271)
T 3zyl_A          174 TVPIIQNQMDALLDFNVNSNE-LTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMT  252 (271)
T ss_dssp             HHHHHHHHHHHHHTTCCCGGG-CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHccCccccc-ccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHH
Confidence            999999999999999987754 67899999999999999999999987443332221   1 3444444  599999999


Q ss_pred             HHHHHHHhcCCCcccccc
Q psy9623         187 QLRQFYMTSSTLQYFKHL  204 (355)
Q Consensus       187 ~L~~FY~~cs~L~yf~sL  204 (355)
                      +|.+||+.|+++..-+..
T Consensus       253 ~L~~Fy~~ck~~gi~~~~  270 (271)
T 3zyl_A          253 RISEFLKVAEQVGIDRGD  270 (271)
T ss_dssp             HHHHHHHHHHHTTCCGGG
T ss_pred             HHHHHHHHHHHcCcCcCC
Confidence            999999999998876654

>3zyl_A Phosphatidylinositol-binding clathrin assembly PR; endocytosis, endobrevin, synaptobrevin, VAMP2, VAMP3, AP180, membrane, adaptor protein; 1.70A {Rattus norvegicus} PDB: 3zyk_A 1hf8_A 1hfa_A* 1hg2_A* 1hg5_A*

Probab=99.70  E-value=1.9e-18  Score=164.66  Aligned_cols=98  Identities=12%  Similarity=0.120  Sum_probs=84.2

Q ss_pred             cccCCCcccccccceeeeeccccc-hhhhhhh-hcccCCCCchhHHHHHHHHHHhhhccCcccHHHHHHhhhHHHHHhhh
Q psy9623         254 VDISHTSSQNASNAILGTFHDKSS-TIFWQCA-SRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKM  331 (355)
Q Consensus       254 Id~sapk~khvR~~I~~t~~~ksa-~~fw~~~-~~~Pl~~~~v~~wK~~~~lHKvLreGHp~~lkes~~~~~~l~~l~r~  331 (355)
                      .|+++||+||||.||++||+.+++ ..||..+ .|++ .+|.+|+||+|+|+||+||||||++++++.++.. +.+|+++
T Consensus        39 ~~~~~Pk~Khv~~il~~T~~~~~~~~~~~~~L~~Rl~-~~~w~v~~KaLivlH~llreG~~~~l~~~~~~~~-~~~Ls~f  116 (271)
T 3zyl_A           39 HEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLFERTT-NSSWVVVFKSLITTHHLMVYGNERFIQYLASRNT-LFNLSNF  116 (271)
T ss_dssp             SSSSCCCHHHHHHHHHHHHSTTSCHHHHHHHHHHHTT-SSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHCSC-CCCCTTC
T ss_pred             CCCCCCCHHHHHHHHHHHccCCCcHHHHHHHHHHHhC-CCchHHHHHHHHHHHHHHhcCCHHHHHHHHhCCC-eechhcc
Confidence            577899999999999999999875 6666665 5777 8999999999999999999999999999988864 5588776


Q ss_pred             ch------------hHHHHHHHHHHHh-hhhhhhc
Q psy9623         332 WH------------AAQYISRSCRRVR-FRAAQKT  353 (355)
Q Consensus       332 w~------------~~~yv~~l~~kl~-fh~~~~~  353 (355)
                      |+            .+.|++||..|+. ||.+++.
T Consensus       117 ~d~~~~~~~~~s~~Ir~Ya~yL~eRl~~f~~~~~d  151 (271)
T 3zyl_A          117 LDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQVAFD  151 (271)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred             CCCCCCCcccccHHHHHHHHHHHHHHHHHHHhCCC
Confidence            54            3789999999997 9988753

>3zym_A Phosphatidylinositol-binding clathrin assembly PR vesicle-associated membrane protein...; endocytosis, synaptobrevin, VAMP2, VAMP3, AP180; HET: PO4; 2.03A {Rattus norvegicus}

Probab=99.70  E-value=1.8e-18  Score=167.58  Aligned_cols=98  Identities=12%  Similarity=0.104  Sum_probs=84.6

Q ss_pred             cccCCCcccccccceeeeeccccc--hhhhhhhhcccCCCCchhHHHHHHHHHHhhhccCcccHHHHHHhhhHHHHHhhh
Q psy9623         254 VDISHTSSQNASNAILGTFHDKSS--TIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKM  331 (355)
Q Consensus       254 Id~sapk~khvR~~I~~t~~~ksa--~~fw~~~~~~Pl~~~~v~~wK~~~~lHKvLreGHp~~lkes~~~~~~l~~l~r~  331 (355)
                      .|+++||+||||.||.+||+.+++  ..||....|++ .+|.+++||+|+++||+||||||++++++.++.. +.+|+++
T Consensus        39 ~~~~pPk~Khv~~il~~T~~~~~~~~~i~~~L~~Rl~-~~~w~vv~KaLivlH~llreG~~~~l~~~~~~~~-~~~Ls~f  116 (310)
T 3zym_A           39 HEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLFERTT-NSSWVVVFKSLITTHHLMVYGNERFIQYLASRNT-LFNLSNF  116 (310)
T ss_dssp             SSSSCCCHHHHHHHHHHHHCTTSCHHHHHHHHHHHTT-SSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHCSC-CCCCTTC
T ss_pred             CCCCCCChhHHHHHHHHHccCCCcHHHHHHHHHhhcC-CCchHHHHHHHHHHHHHHhcCCHHHHHHHHhCCC-eeecccc
Confidence            577899999999999999999874  55666666888 8999999999999999999999999999988775 4488886


Q ss_pred             ch------------hHHHHHHHHHHHh-hhhhhhc
Q psy9623         332 WH------------AAQYISRSCRRVR-FRAAQKT  353 (355)
Q Consensus       332 w~------------~~~yv~~l~~kl~-fh~~~~~  353 (355)
                      |+            .+.|++||..|+. ||.+++.
T Consensus       117 ~d~~~~~g~~~~~~Ir~Ya~yL~~Rl~~f~~~~~d  151 (310)
T 3zym_A          117 LDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQVAFD  151 (310)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred             cCCCCcCcccccHHHHHHHHHHHHHHHHHHHhCCC
Confidence            63            3789999999999 9987653

>1hx8_A Synapse-enriched clathrin adaptor protein LAP; all alpha, alpha helices repeats, coiled-coil, endocytosis/exocytosis complex; 2.20A {Drosophila melanogaster} SCOP: a.7.8.2 a.118.9.3

Probab=99.69  E-value=2.9e-18  Score=164.96  Aligned_cols=97  Identities=9%  Similarity=0.093  Sum_probs=79.7

Q ss_pred             cccCCCcccccccceeeeecccc--chhhhhhhhcccCCCCchhHHHHHHHHHHhhhccCcccHHHHHHhh------hHH
Q psy9623         254 VDISHTSSQNASNAILGTFHDKS--STIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQA------QVI  325 (355)
Q Consensus       254 Id~sapk~khvR~~I~~t~~~ks--a~~fw~~~~~~Pl~~~~v~~wK~~~~lHKvLreGHp~~lkes~~~~------~~l  325 (355)
                      .|+.+||+||||.||++||++++  +..||....+ |..+|.+|+||+|||+|||||||||+++++..++.      +|.
T Consensus        34 ~~~~ppk~Khv~~ii~~t~~~~~~~~~~~~~L~~R-~~~~~w~va~K~LivlH~llreG~~~~~~~l~~~~~~l~l~~f~  112 (299)
T 1hx8_A           34 EECIGPKKKHLDYLVHCANEPNVSIPHLANLLIER-SQNANWVVVYKSLITTHHLMAYGNERFMQYLASSNSTFNLSSFL  112 (299)
T ss_dssp             SSSSCCCHHHHHHHHHHHHCTTSCHHHHHHHHHHH-HTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCCCCTTCC
T ss_pred             CCCCCCCHHHHHHHHHHHcCCCCCHHHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHhcCCHHHHHHHHhCCcccchhhhh
Confidence            47889999999999999999999  5556665555 99999999999999999999999999999998755      232


Q ss_pred             HHH------------hhhch----hHHHHHHHHHH-Hhhhhhh
Q psy9623         326 TNV------------GKMWH----AAQYISRSCRR-VRFRAAQ  351 (355)
Q Consensus       326 ~~l------------~r~w~----~~~yv~~l~~k-l~fh~~~  351 (355)
                      ++-            ...|+    .+.|+.||..| +.||.++
T Consensus       113 D~~~~~~~~~~~~~~~~~~d~s~~Ir~Ya~yL~~r~~~f~~~~  155 (299)
T 1hx8_A          113 DKGTVQDGGMGVPGGRMGYDMSPFIRRYAKYLNEKSLSYRAMA  155 (299)
T ss_dssp             CCCC---CCSSCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             cccccccccccccccccccchhHHHHHHHHHHHHHHHHHHHhC
Confidence            221            13344    28999999999 7999876

>1inz_A EPS15-interacting portein(epsin); alpha-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.118.9.1

Probab=94.57  E-value=0.041  Score=47.91  Aligned_cols=91  Identities=10%  Similarity=0.007  Sum_probs=67.5

Q ss_pred             ccCCCcccccccceeeeeccccchhhhhhhhcccCC--CCchhHHHHHHHHHHhhhccCcccHHHHHHhhhHHHHHhhh-
Q psy9623         255 DISHTSSQNASNAILGTFHDKSSTIFWQCASRLPLM--ENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKM-  331 (355)
Q Consensus       255 d~sapk~khvR~~I~~t~~~ksa~~fw~~~~~~Pl~--~~~v~~wK~~~~lHKvLreGHp~~lkes~~~~~~l~~l~r~-  331 (355)
                      |...|+.++.--|...|++..........+.++=-.  .+-.+.+|+|.+||=+|+.|.+.|+.++..|..-|..|..+ 
T Consensus        35 d~wGP~~~~m~eIa~~T~~~~~~~eIm~~l~kRL~d~~k~WR~vyKaL~lleyLl~nGse~vv~~~r~~~~~I~~L~~F~  114 (148)
T 1inz_A           35 DPWGPSSSLMSEIADLTYNVVAFSEIMSMIWKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQ  114 (148)
T ss_dssp             CSCCCCSCHHHHHHHHHTSSHHHHHHHHHHHHGGGCCSSCTHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHHHCC
T ss_pred             CCCCcCHHHHHHHHHHhCCHhhHHHHHHHHHHHHccCCcchhHhhHHHHHHHHHHHhCCHHHHHHHHHhHHHHHhhccee
Confidence            345667788888888999875544333433333112  46789999999999999999999999999999988888763 


Q ss_pred             --------ch--hHHHHHHHHHHH
Q psy9623         332 --------WH--AAQYISRSCRRV  345 (355)
Q Consensus       332 --------w~--~~~yv~~l~~kl  345 (355)
                              ||  .|+++.+|++=|
T Consensus       115 y~d~~g~D~G~nVR~kAk~l~~LL  138 (148)
T 1inz_A          115 YVDRDGKDQGVNVREKAKQLVALL  138 (148)
T ss_dssp             CCCSSCCCCCHHHHHHHHHHHHHH
T ss_pred             eeCCCCcCchHHHHHHHHHHHHHh
Confidence                    33  388888887654

>1eyh_A Epsin; superhelix of helices, cell cycle; 1.56A {Rattus norvegicus} SCOP: a.118.9.1 PDB: 1h0a_A* 1edu_A

Probab=93.45  E-value=0.04  Score=47.71  Aligned_cols=90  Identities=9%  Similarity=-0.010  Sum_probs=65.4

Q ss_pred             cCCCcccccccceeeeeccccchhhhhhhhcccCC--CCchhHHHHHHHHHHhhhccCcccHHHHHHhhhHHHHHhhh--
Q psy9623         256 ISHTSSQNASNAILGTFHDKSSTIFWQCASRLPLM--ENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKM--  331 (355)
Q Consensus       256 ~sapk~khvR~~I~~t~~~ksa~~fw~~~~~~Pl~--~~~v~~wK~~~~lHKvLreGHp~~lkes~~~~~~l~~l~r~--  331 (355)
                      ...|+.++.--|...|++..........+.++=..  .+-.+.+|+|.+||=+|+.|.+.|+.++..|..-|..|..+  
T Consensus        18 ~wGP~~~~m~eIa~~T~~~~~~~~Im~~l~kRL~d~~k~Wr~vyKaL~lleyLl~nGse~vv~~~~~~~~~i~~L~~F~y   97 (144)
T 1eyh_A           18 PWGPSSSLMSEIADLTYNVVAFSEIMSMIWKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQY   97 (144)
T ss_dssp             SSCCCHHHHHHHHHHTTSHHHHHHHHHHHHHHHSCCGGGHHHHHHHHHHHHHHHHHSCHHHHHHHHHTHHHHHGGGGCCC
T ss_pred             CCCCCHHHHHHHHHHhCCHhhHHHHHHHHHHHHccCCcchHHHhHHHHHHHHHHHhCCHHHHHHHHHhhHHHhhhcccee
Confidence            45677788888888998865433333333333112  35678999999999999999999999999999988888764  


Q ss_pred             -------chh--HHHHHHHHHHH
Q psy9623         332 -------WHA--AQYISRSCRRV  345 (355)
Q Consensus       332 -------w~~--~~yv~~l~~kl  345 (355)
                             ||.  |+++.+|+.=|
T Consensus        98 ~d~~g~D~G~~VR~kak~l~~Ll  120 (144)
T 1eyh_A           98 VDRDGKDQGVNVREKAKQLVALL  120 (144)
T ss_dssp             BCTTSCBCHHHHHHHHHHHHHHH
T ss_pred             eCCCccchHHHHHHHHHHHHHHH
Confidence                   333  77777776543

>3onk_A Epsin-3, ENT3; helix, protein transport; 2.09A {Saccharomyces cerevisiae} PDB: 3onl_A

Probab=81.53  E-value=0.32  Score=42.34  Aligned_cols=74  Identities=14%  Similarity=0.107  Sum_probs=53.5

Q ss_pred             CCCcccccccceeeeeccccchhhhhhhhcccC---CCCchhHHHHHHHHHHhhhccCcccHHHHHHhhhHHHHHhh
Q psy9623         257 SHTSSQNASNAILGTFHDKSSTIFWQCASRLPL---MENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGK  330 (355)
Q Consensus       257 sapk~khvR~~I~~t~~~ksa~~fw~~~~~~Pl---~~~~v~~wK~~~~lHKvLreGHp~~lkes~~~~~~l~~l~r  330 (355)
                      ..|..++.--|..+|++..........+.++=.   ..+--+.+|+|.+|+=+|+.|.+.|+.++..|..-|+.|..
T Consensus        25 wGp~~~~m~eIa~~T~~~~~~~eIm~~l~kRL~d~~~k~WR~vyKaL~lLeyLl~nGse~vv~~~r~~~~~i~~L~~  101 (150)
T 3onk_A           25 WGASSTLMDQISQGTYNFREREEILSMIFRRFTEKAGSEWRQIYKALQLLDYLIKHGSERFIDDTRNSINLIRILET  101 (150)
T ss_dssp             SCCCHHHHHHHHHHTTSHHHHHHHHHHHHHHHHSCCSTTHHHHHHHHHHHHHHHHHSCHHHHHHHHTTHHHHHGGGG
T ss_pred             CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhc
Confidence            345566766777788875443222233322211   23678899999999999999999999999999999998765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	355
d1hx8a2	140	a.118.9.3 (A:22-161) AP180 (Lap) {Fruit fly (Droso	2e-05
d1hf8a2	131	a.118.9.3 (A:19-149) Clathrin assembly lymphoid my	1e-04

>d1hx8a2 a.118.9.3 (A:22-161) AP180 (Lap) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 140

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ENTH/VHS domain
family: Phosphoinositide-binding clathrin adaptor, N-terminal domain
domain: AP180 (Lap)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 41.8 bits (98), Expect = 2e-05
 Identities = 6/52 (11%), Positives = 14/52 (26%), Gaps = 1/52 (1%)

Query: 268 ILGTFHDKSSTIFW-QCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKES 318
           +        S               N +V +K     H ++  G+   ++  
Sbjct: 27  VHCANEPNVSIPHLANLLIERSQNANWVVVYKSLITTHHLMAYGNERFMQYL 78

>d1hf8a2 a.118.9.3 (A:19-149) Clathrin assembly lymphoid myeloid leukaemia protein, Calm {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 131

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ENTH/VHS domain
family: Phosphoinositide-binding clathrin adaptor, N-terminal domain
domain: Clathrin assembly lymphoid myeloid leukaemia protein, Calm
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.1 bits (91), Expect = 1e-04
 Identities = 7/75 (9%), Positives = 20/75 (26%), Gaps = 1/75 (1%)

Query: 260 SSQNASNAILGTFHDKSS-TIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKES 318
             ++    I  T     +               + +V +K     H ++  G+   I+  
Sbjct: 20  KKKHLDYLIQCTNEMNVNIPQLADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFIQYL 79

Query: 319 IKQAQVITNVGKMWH 333
             +  +      +  
Sbjct: 80  ASRNTLFNLSNFLDK 94

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	355
d1hx8a2	140	AP180 (Lap) {Fruit fly (Drosophila melanogaster) [	99.54
d1hf8a1	132	Clathrin assembly lymphoid myeloid leukaemia prote	99.48
d1hf8a2	131	Clathrin assembly lymphoid myeloid leukaemia prote	99.48
d1hx8a1	133	AP180 (Lap) {Fruit fly (Drosophila melanogaster) [	99.46
d1hf8a2	131	Clathrin assembly lymphoid myeloid leukaemia prote	98.48
d1eyha_	144	Epsin 1 {Rat (Rattus norvegicus) [TaxId: 10116]}	98.48
d1hx8a2	140	AP180 (Lap) {Fruit fly (Drosophila melanogaster) [	98.47
d1eyha_	144	Epsin 1 {Rat (Rattus norvegicus) [TaxId: 10116]}	94.16

>d1hx8a2 a.118.9.3 (A:22-161) AP180 (Lap) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ENTH/VHS domain
family: Phosphoinositide-binding clathrin adaptor, N-terminal domain
domain: AP180 (Lap)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.54  E-value=5.3e-16  Score=132.01  Aligned_cols=98  Identities=8%  Similarity=0.004  Sum_probs=83.0

Q ss_pred             cccCCCcccccccceeeeeccccchh-hhhhhhcccCCCCchhHHHHHHHHHHhhhccCcccHHHHHHhhhHHHHHhh--
Q psy9623         254 VDISHTSSQNASNAILGTFHDKSSTI-FWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGK--  330 (355)
Q Consensus       254 Id~sapk~khvR~~I~~t~~~ksa~~-fw~~~~~~Pl~~~~v~~wK~~~~lHKvLreGHp~~lkes~~~~~~l~~l~r--  330 (355)
                      .|+.+||.||||.||.+||+++++.. +|..+.+++...|.+++||+|++||++||+|+|+++++..+++.++. |.+  
T Consensus        13 ~~~~~Pk~K~v~~i~~~t~~~~~~~~~i~~~L~~Rl~~~~w~v~~K~L~llh~ll~~G~~~~~~~~~~~~~~~~-l~~f~   91 (140)
T d1hx8a2          13 EECIGPKKKHLDYLVHCANEPNVSIPHLANLLIERSQNANWVVVYKSLITTHHLMAYGNERFMQYLASSNSTFN-LSSFL   91 (140)
T ss_dssp             SSSSCCCHHHHHHHHHHHHCTTSCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCCC-CTTCC
T ss_pred             CCCCCCCHHHHHHHHHHHcCCcccHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHhcCCHHHHHHHHhCCCccc-ccccc
Confidence            47789999999999999999987644 56778888888999999999999999999999999999999988774 322  


Q ss_pred             -------------------hch--hHHHHHHHHHHHhhhhhhh
Q psy9623         331 -------------------MWH--AAQYISRSCRRVRFRAAQK  352 (355)
Q Consensus       331 -------------------~w~--~~~yv~~l~~kl~fh~~~~  352 (355)
                                         .++  .++|+.||..|+.+.+.-+
T Consensus        92 d~~~~~~~~~~~~~~~~~~~~~~~Ir~Ya~yL~eRl~~~R~~~  134 (140)
T d1hx8a2          92 DKGTVQDGGMGVPGGRMGYDMSPFIRRYAKYLNEKSLSYRAMA  134 (140)
T ss_dssp             CCCC---CCSSCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             cccccccccccccccccccchhHHHHHHHHHHHHHHHHHHHhc
Confidence                               122  3899999999999987643

>d1hf8a1 a.7.8.2 (A:150-281) Clathrin assembly lymphoid myeloid leukaemia protein, Calm {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: GAT-like domain
family: Phosphoinositide-binding clathrin adaptor, domain 2
domain: Clathrin assembly lymphoid myeloid leukaemia protein, Calm
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.48  E-value=1.3e-14  Score=123.16  Aligned_cols=114  Identities=15%  Similarity=0.269  Sum_probs=97.6

Q ss_pred             HhHhhhHHHHHHHHHHHHHhcCCCCCCCCCCCCcccccchhhhHhhhhhHHHHHH-------HHHHHHhhcCChhHHHHH
Q psy9623         105 VEMFDYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFCV-------KILFKLHASLPSEILAGH  177 (355)
Q Consensus       105 ~dl~DllD~l~~LQ~~Vf~~l~~~~~~S~t~~gqcrla~Li~vI~ES~~IY~~iv-------~~lf~Lh~~lp~daL~g~  177 (355)
                      ++.-.+++.++.+|+.+.+.++|.+.+.. .+|.+.++|+-++++||++||..+.       +.+|+|.+   .|+..++
T Consensus        10 m~~~~LL~~l~~lQ~lld~Ll~c~p~~~~-~~n~vi~~A~~llvkds~~lY~~inegiinLLd~fFem~k---~da~~al   85 (132)
T d1hf8a1          10 MNTEKLLKTVPIIQNQMDALLDFNVNSNE-LTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKK---NQCKEGL   85 (132)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTCCCGGG-CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSSCH---HHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCccch-hhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH---HHHHHHH
Confidence            34456999999999999999999998765 5788999999999999999999985       55666666   4555555


Q ss_pred             H--HHHHHHHHHHHHHHHhcCCCccccccccccCCCCCCCchhhhhccCCc
Q psy9623         178 R--SRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSY  226 (355)
Q Consensus       178 r--~RF~~Q~~~L~~FY~~cs~L~yf~sLIqiP~LP~~PPnFl~~s~l~ey  226 (355)
                      .  +||.+|..+|.+||+-|+++..++  ..||++-..|++|+.  +||||
T Consensus        86 ~iykr~~~q~e~L~~f~~~ck~~g~~r--~e~P~l~~~p~sll~--~LEey  132 (132)
T d1hf8a1          86 DIYKKFLTRMTRISEFLKVAEQVGIDR--GDIPDLSQAPSSLLD--ALEQH  132 (132)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCG--GGSCCCCCSCSCCTT--TTSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCcc--cCCCCCcCCCHHHHH--HHhcC
Confidence            5  999999999999999999998754  389999999999987  59988

>d1hf8a2 a.118.9.3 (A:19-149) Clathrin assembly lymphoid myeloid leukaemia protein, Calm {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ENTH/VHS domain
family: Phosphoinositide-binding clathrin adaptor, N-terminal domain
domain: Clathrin assembly lymphoid myeloid leukaemia protein, Calm
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.48  E-value=2.4e-15  Score=126.34  Aligned_cols=99  Identities=9%  Similarity=-0.016  Sum_probs=85.9

Q ss_pred             cccCCCcccccccceeeeecccc-chhhhhhhhcccCCCCchhHHHHHHHHHHhhhccCcccHHHHHHhhhHHHHHhhhc
Q psy9623         254 VDISHTSSQNASNAILGTFHDKS-STIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMW  332 (355)
Q Consensus       254 Id~sapk~khvR~~I~~t~~~ks-a~~fw~~~~~~Pl~~~~v~~wK~~~~lHKvLreGHp~~lkes~~~~~~l~~l~r~w  332 (355)
                      .|+..|+.||+|.|+.+||+.++ +..+|..+.+++..+|.+++||+|++||++||+|+|.++.+..++..+|+..+..+
T Consensus        14 ~~~~~P~~k~v~~i~~~t~~~~~~~~~~~~~L~~Rl~~~~w~v~~K~L~llh~ll~~G~~~~~~~~~~~~~~l~l~~~~~   93 (131)
T d1hf8a2          14 HEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFIQYLASRNTLFNLSNFLD   93 (131)
T ss_dssp             SSSSCCCHHHHHHHHHHHTCTTSCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHSSCCCCCTTCCC
T ss_pred             CCCCCCCHHHHHHHHHHHhCCcccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHhCcchhhhhhccc
Confidence            46789999999999999999986 57899999999999999999999999999999999999999999988886332222


Q ss_pred             -------h----hHHHHHHHHHHHhhhhhhh
Q psy9623         333 -------H----AAQYISRSCRRVRFRAAQK  352 (355)
Q Consensus       333 -------~----~~~yv~~l~~kl~fh~~~~  352 (355)
                             +    .+.|+.||..|+.+.+.-|
T Consensus        94 ~~~~~~~~~~~~Ir~Ya~yL~er~~~~r~~~  124 (131)
T d1hf8a2          94 KSGLQGYDMSTFIRRYSRYLNEKAVSYRQVA  124 (131)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             cCCCCcCcccHHHHHHHHHHHHHHHHHHHhc
Confidence                   1    2899999999999887654

>d1hx8a1 a.7.8.2 (A:167-299) AP180 (Lap) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: GAT-like domain
family: Phosphoinositide-binding clathrin adaptor, domain 2
domain: AP180 (Lap)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.46  E-value=1.3e-14  Score=123.24  Aligned_cols=118  Identities=17%  Similarity=0.241  Sum_probs=100.1

Q ss_pred             HhHhhhHHHHHHHHHHHHHhcCCCCCCCCCCCCcccccchhhhHhhhhhHHHHH-------HHHHHHHhhcCChhHHHHH
Q psy9623         105 VEMFDYLDEILALQAAVFGSLDMSRSNSMTSSGQCRLSPLIPCIQDSSQLYDFC-------VKILFKLHASLPSEILAGH  177 (355)
Q Consensus       105 ~dl~DllD~l~~LQ~~Vf~~l~~~~~~S~t~~gqcrla~Li~vI~ES~~IY~~i-------v~~lf~Lh~~lp~daL~g~  177 (355)
                      ++.-.+++.++.+|+.+.+.++|.+.+.. .+|.+.++|+-++++||+.||..+       ++.+|+|.+.....+|+.+
T Consensus         7 m~~~~LL~~l~~lQ~lld~Ll~c~p~~~~-~~n~vi~~A~~llvkds~~lY~~inegiinLLd~fFem~k~da~~al~iy   85 (133)
T d1hx8a1           7 MNAEKLLKTLPVLQAQLDALLEFDCQSND-LSNGVINMSFMLLFRDLIRLFACYNDGIINLLEKYFDMNKKHARDALDLY   85 (133)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTCCCGGG-CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHcCCccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence            34456999999999999999999998865 467899999999999999999998       4677888773333444444


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCccccccccccCCCCCCCchhhhhccCCccC
Q psy9623         178 RSRFLKQFSQLRQFYMTSSTLQYFKHLIQVPTLPETPPNLLIQAELGSYVT  228 (355)
Q Consensus       178 r~RF~~Q~~~L~~FY~~cs~L~yf~sLIqiP~LP~~PPnFl~~s~l~eyv~  228 (355)
                       +||.+|..+|.+||+-|+++..++  ..||++-..|++|+.  +||+|+.
T Consensus        86 -k~~~~q~e~L~~f~~~ck~~g~~r--~e~P~l~~~p~sll~--~LEe~l~  131 (133)
T d1hx8a1          86 -KKFLVRMDRVGEFLKVAENVGIDK--GDIPDLTKAPSSLLD--ALEQHLA  131 (133)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHTTCCG--GGSCCCCCCCHHHHH--HHHHHHH
T ss_pred             -HHHHHHHHHHHHHHHHHHHcCccc--cCCCCCCCCCHHHHH--HHHHHHH
Confidence             999999999999999999998765  389999999999987  4999874

>d1hf8a2 a.118.9.3 (A:19-149) Clathrin assembly lymphoid myeloid leukaemia protein, Calm {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ENTH/VHS domain
family: Phosphoinositide-binding clathrin adaptor, N-terminal domain
domain: Clathrin assembly lymphoid myeloid leukaemia protein, Calm
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.48  E-value=1.4e-08  Score=84.24  Aligned_cols=24  Identities=25%  Similarity=0.261  Sum_probs=22.0

Q ss_pred             CccHHHHHHHHHHHHHHhhhhcCC
Q psy9623          53 GYGKLIYQYTRLLLGKLDFHRRNP   76 (355)
Q Consensus        53 ~Yg~lI~~Y~klL~~KLeFH~k~~   76 (355)
                      |||.+|+.|++||.+|+.+++..+
T Consensus       101 ~~~~~Ir~Ya~yL~er~~~~r~~~  124 (131)
T d1hf8a2         101 DMSTFIRRYSRYLNEKAVSYRQVA  124 (131)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhc
Confidence            489999999999999999998776

>d1eyha_ a.118.9.1 (A:) Epsin 1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ENTH/VHS domain
family: ENTH domain
domain: Epsin 1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.48  E-value=2.2e-08  Score=84.50  Aligned_cols=91  Identities=10%  Similarity=0.004  Sum_probs=78.2

Q ss_pred             ccCCCcccccccceeeeeccccchhhhhhhhcccCCC--CchhHHHHHHHHHHhhhccCcccHHHHHHhhhHHHHHhhh-
Q psy9623         255 DISHTSSQNASNAILGTFHDKSSTIFWQCASRLPLME--NVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKM-  331 (355)
Q Consensus       255 d~sapk~khvR~~I~~t~~~ksa~~fw~~~~~~Pl~~--~~v~~wK~~~~lHKvLreGHp~~lkes~~~~~~l~~l~r~-  331 (355)
                      |...|+.||++.|+..||+..+...+|..+.++....  +-++++|+|++||.+|++|+|.++.+.++|..+|+.+..+ 
T Consensus        17 d~~~p~~k~~~~I~~~t~~~~~~~~i~~~L~kRl~~~~k~Wrvv~K~L~ll~~Ll~~G~~~~v~~~~~~~~~i~~l~~f~   96 (144)
T d1eyha_          17 DPWGPSSSLMSEIADLTYNVVAFSEIMSMIWKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQ   96 (144)
T ss_dssp             SSSCCCHHHHHHHHHHTTSHHHHHHHHHHHHHHHSCCGGGHHHHHHHHHHHHHHHHHSCHHHHHHHHHTHHHHHGGGGCC
T ss_pred             CCCCCCHHHHHHHHHHhcChhhHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHcCCHHHHHHHHHhHHHHHhhhcCc
Confidence            5667899999999999999999999999887776644  5589999999999999999999999999999999998864 


Q ss_pred             --------ch--hHHHHHHHHHHH
Q psy9623         332 --------WH--AAQYISRSCRRV  345 (355)
Q Consensus       332 --------w~--~~~yv~~l~~kl  345 (355)
                              ||  .|+|+.+|+.-|
T Consensus        97 ~~d~~g~d~g~~VR~kA~~l~~Ll  120 (144)
T d1eyha_          97 YVDRDGKDQGVNVREKAKQLVALL  120 (144)
T ss_dssp             CBCTTSCBCHHHHHHHHHHHHHHH
T ss_pred             ccCccccchhHHHHHHHHHHHHHh
Confidence                    22  378888886554

>d1hx8a2 a.118.9.3 (A:22-161) AP180 (Lap) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ENTH/VHS domain
family: Phosphoinositide-binding clathrin adaptor, N-terminal domain
domain: AP180 (Lap)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.47  E-value=3.1e-08  Score=83.22  Aligned_cols=24  Identities=21%  Similarity=0.155  Sum_probs=22.1

Q ss_pred             CccHHHHHHHHHHHHHHhhhhcCC
Q psy9623          53 GYGKLIYQYTRLLLGKLDFHRRNP   76 (355)
Q Consensus        53 ~Yg~lI~~Y~klL~~KLeFH~k~~   76 (355)
                      +||.||+.|++||.+|+.+++...
T Consensus       111 ~~~~~Ir~Ya~yL~eRl~~~R~~~  134 (140)
T d1hx8a2         111 DMSPFIRRYAKYLNEKSLSYRAMA  134 (140)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhc
Confidence            499999999999999999998875

>d1eyha_ a.118.9.1 (A:) Epsin 1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ENTH/VHS domain
family: ENTH domain
domain: Epsin 1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.16  E-value=0.016  Score=47.54  Aligned_cols=22  Identities=5%  Similarity=-0.050  Sum_probs=19.8

Q ss_pred             HHHHHHHhhhcCCCCCcccccc
Q psy9623          27 FQSASIGKAVNSQETPVKEKHF   48 (355)
Q Consensus        27 ~~~isI~KA~n~~E~p~KeKHv   48 (355)
                      +..+.|.||||+.+.||++||+
T Consensus         5 ~~e~~v~~ATs~d~~~p~~k~~   26 (144)
T d1eyha_           5 EAEIKVREATSNDPWGPSSSLM   26 (144)
T ss_dssp             HHHHHHHHHTCSSSSCCCHHHH
T ss_pred             HHHHHHHHHcCCCCCCCCHHHH
Confidence            3456899999999999999999