Psyllid ID: psy9730


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
MHCKCHGVSGTCNIRTCWKSLPSKFIEVGKKLVNEYSRAIEIKAGVRTGSLRYSSTNDLVYVTKSPDYCNFDAKLGSYGTSGRACNKSLTGYAGCESMCCGRGYSTKLIEKIERCQCKYHYCCYVKCKICHTWIERQYCN
cccccccccccHHHHHHHccccHHHHHHHHHHHHHHHHcEEHHcccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEEccEEEEEEEEEccccEEEEEEEEcc
ccccEcccccccEEEHHHHHcccHHHHHHHHHHHHccccEEEEEccccccccccccccEEEEcccccccccccccccccccccEccccccccccccEEEcccccccEEEEEEEEEEEEEEEEEEEEEccEEEEEEEEEcc
mhckchgvsgtcnirtcwkslpSKFIEVGKKLVNEYSRAIEIKagvrtgslrysstndlvyvtkspdycnfdaklgsygtsgracnksltgyagcesmccgrgysTKLIEKIERcqckyhyccyvkckichtwierqycn
mhckchgvsgtcnirtcwKSLPSKFIEVGKKLVNEYSRAIeikagvrtgslryssTNDLVYVTKSPDYCNFDAKLGSYGTSGRACNKSLTGYAGCESMCCGRGYSTKLIEKIERCQCKYHYCCYVKCKICHTWIERQYCN
MHCKCHGVSGTCNIRTCWKSLPSKFIEVGKKLVNEYSRAIEIKAGVRTGSLRYSSTNDLVYVTKSPDYCNFDAKLGSYGTSGRACNKSLTGYAGCESMCCGRGYSTKLIEKIERcqckyhyccyvkckicHTWIERQYCN
**CKCHGVSGTCNIRTCWKSLPSKFIEVGKKLVNEYSRAIEIKAGVRTGSLRYSSTNDLVYVTKSPDYCNFDAKLGSYGTSGRACNKSLTGYAGCESMCCGRGYSTKLIEKIERCQCKYHYCCYVKCKICHTWIERQY**
MHCKCHGVSGTCNIRTCWKSLPSKFIEVGKKLVNEYSR********************LVYVTKSPDYCNFDAKLGSYGTSGRACNKS*TGYAGCESMCCGRGYSTKLIEKIERCQCKYHYCCYVKCKICHTWIERQYCN
********SGTCNIRTCWKSLPSKFIEVGKKLVNEYSRAIEIKAGVRTGSLRYSSTNDLVYVTKSPDYCNFDAKLGSYGTSGRACNKSLTGYAGCESMCCGRGYSTKLIEKIERCQCKYHYCCYVKCKICHTWIERQYCN
MHCKCHGVSGTCNIRTCWKSLPSKFIEVGKKLVNEYSRAIEIKAGVRTGSLRYSSTNDLVYVTKSPDYCNFDAKLGSYGTSGRACNKSLTGYAGCESMCCGRGYSTKLIEKIERCQCKYHYCCYVKCKICHTWIERQYCN
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MHCKCHGVSGTCNIRTCWKSLPSKFIEVGKKLVNEYSRAIEIKAGVRTGSLRYSSTNDLVYVTKSPDYCNFDAKLGSYGTSGRACNKSLTGYAGCESMCCGRGYSTKLIEKIERCQCKYHYCCYVKCKICHTWIERQYCN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query140 2.2.26 [Sep-21-2011]
P49338351 Protein Wnt-4 OS=Xenopus N/A N/A 0.985 0.393 0.439 1e-33
P49337351 Protein Wnt-4 OS=Gallus g yes N/A 0.985 0.393 0.445 8e-33
P28047349 Protein Wnt-7b OS=Mus mus yes N/A 0.914 0.366 0.465 2e-31
P56706349 Protein Wnt-7b OS=Homo sa yes N/A 0.914 0.366 0.465 2e-31
P56705351 Protein Wnt-4 OS=Homo sap no N/A 0.985 0.393 0.412 2e-31
O15978363 Protein Wnt-5 OS=Halocynt N/A N/A 0.978 0.377 0.458 2e-31
P47793352 Protein Wnt-4a OS=Danio r yes N/A 0.985 0.392 0.436 2e-31
O70283389 Protein Wnt-2b OS=Mus mus no N/A 0.978 0.352 0.442 3e-31
P22724351 Protein Wnt-4 OS=Mus musc no N/A 0.985 0.393 0.405 5e-31
Q9QXQ5351 Protein Wnt-4 OS=Rattus n no N/A 0.985 0.393 0.405 8e-31
>sp|P49338|WNT4_XENLA Protein Wnt-4 OS=Xenopus laevis GN=wnt4 PE=2 SV=1 Back     alignment and function desciption
 Score =  141 bits (356), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 93/148 (62%), Gaps = 10/148 (6%)

Query: 1   MHCKCHGVSGTCNIRTCWKSLPSKFIEVGKKLVNEYSRAIEIKAG---------VRTGSL 51
           + CKCHGVSG+C ++TCWK++P+ F +VG  L  ++  A E++            +    
Sbjct: 204 VECKCHGVSGSCEVKTCWKAMPT-FRKVGNVLKEKFDGATEVEQKKIGSTKVLVPKNSQF 262

Query: 52  RYSSTNDLVYVTKSPDYCNFDAKLGSYGTSGRACNKSLTGYAGCESMCCGRGYSTKLIEK 111
           +  +  DLVY+  SPD+C+ D K G  GT+GR CNK+     GCE MCCGRG+ T+ +E 
Sbjct: 263 KPHTDEDLVYLDSSPDFCDHDLKNGVLGTTGRQCNKTSKAIDGCELMCCGRGFHTEEVEI 322

Query: 112 IERCQCKYHYCCYVKCKICHTWIERQYC 139
           +ERC CK+H+CC+VKCK CH  +E   C
Sbjct: 323 VERCSCKFHWCCFVKCKQCHKVVEMHTC 350




Ligand for members of the frizzled family of seven transmembrane receptors. Signaling molecule which affects the development of discrete regions of tissues. Acts downstream of Notch signaling during pronephric kidney development. During early pronephros development, patterns the proximal pronephric anlagen to promote glomus and nephrostome formation. Also required later in pronephros development for tubulogenesis. Is likely to signal over distances of only a few cell diameters.
Xenopus laevis (taxid: 8355)
>sp|P49337|WNT4_CHICK Protein Wnt-4 OS=Gallus gallus GN=WNT4 PE=1 SV=1 Back     alignment and function description
>sp|P28047|WNT7B_MOUSE Protein Wnt-7b OS=Mus musculus GN=Wnt7b PE=1 SV=1 Back     alignment and function description
>sp|P56706|WNT7B_HUMAN Protein Wnt-7b OS=Homo sapiens GN=WNT7B PE=1 SV=2 Back     alignment and function description
>sp|P56705|WNT4_HUMAN Protein Wnt-4 OS=Homo sapiens GN=WNT4 PE=1 SV=4 Back     alignment and function description
>sp|O15978|WNT5_HALRO Protein Wnt-5 OS=Halocynthia roretzi GN=WNT5 PE=3 SV=1 Back     alignment and function description
>sp|P47793|WNT4A_DANRE Protein Wnt-4a OS=Danio rerio GN=wnt4a PE=2 SV=1 Back     alignment and function description
>sp|O70283|WNT2B_MOUSE Protein Wnt-2b OS=Mus musculus GN=Wnt2b PE=2 SV=3 Back     alignment and function description
>sp|P22724|WNT4_MOUSE Protein Wnt-4 OS=Mus musculus GN=Wnt4 PE=1 SV=1 Back     alignment and function description
>sp|Q9QXQ5|WNT4_RAT Protein Wnt-4 OS=Rattus norvegicus GN=Wnt4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query140
328716038 243 PREDICTED: protein Wnt-11b-like [Acyrtho 0.985 0.567 0.528 8e-39
270008220 378 hypothetical protein TcasGA2_TC014270 [T 0.928 0.343 0.545 1e-33
91082825 303 PREDICTED: similar to Wnt11 protein [Tri 0.928 0.429 0.545 1e-33
269785075 358 wingless-type MMTV integration site fami 0.971 0.379 0.506 5e-33
374843762195 Wnt11 protein, partial [Glomeris margina 0.971 0.697 0.5 1e-32
350583709 778 PREDICTED: hypothetical protein LOC10062 0.978 0.176 0.450 3e-32
358412570 949 PREDICTED: uncharacterized protein LOC52 0.978 0.144 0.457 4e-32
260841447 353 hypothetical protein BRAFLDRAFT_56711 [B 0.978 0.388 0.476 4e-32
334328249 551 PREDICTED: protein Wnt-4-like [Monodelph 0.985 0.250 0.452 4e-32
3127185 353 AmphiWnt4 [Branchiostoma floridae] 0.978 0.388 0.476 5e-32
>gi|328716038|ref|XP_001944637.2| PREDICTED: protein Wnt-11b-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  164 bits (416), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 75/142 (52%), Positives = 107/142 (75%), Gaps = 4/142 (2%)

Query: 2   HCKCHGVSGTCNIRTCWKSLPSKFIEVGKKLVNEYSRA---IEIKAGVRTGSLRYSSTND 58
           HCKCHG+SG+CN++TCW+ LP+KFI VG KL+  Y++    +E+   +R G  +++ ++ 
Sbjct: 103 HCKCHGMSGSCNVKTCWRGLPNKFIGVGIKLLKLYNKTPLKVEMVQVIRFGLPKHTDSS- 161

Query: 59  LVYVTKSPDYCNFDAKLGSYGTSGRACNKSLTGYAGCESMCCGRGYSTKLIEKIERCQCK 118
           LVY+T+S DYCN+D ++GSYGT GR CN +  G   C +MCCGRGY+T+ IE+ ERCQCK
Sbjct: 162 LVYITESSDYCNYDQRVGSYGTVGRKCNSTAIGTENCLAMCCGRGYTTQTIEQTERCQCK 221

Query: 119 YHYCCYVKCKICHTWIERQYCN 140
           YH+CCYV C+ C + ++RQ CN
Sbjct: 222 YHWCCYVNCQNCTSLVKRQICN 243




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270008220|gb|EFA04668.1| hypothetical protein TcasGA2_TC014270 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|91082825|ref|XP_969261.1| PREDICTED: similar to Wnt11 protein [Tribolium castaneum] Back     alignment and taxonomy information
>gi|269785075|ref|NP_001161493.1| wingless-type MMTV integration site family, member 11 precursor [Saccoglossus kowalevskii] gi|268054401|gb|ACY92687.1| Wnt11 [Saccoglossus kowalevskii] Back     alignment and taxonomy information
>gi|374843762|emb|CBL52910.1| Wnt11 protein, partial [Glomeris marginata] Back     alignment and taxonomy information
>gi|350583709|ref|XP_003355355.2| PREDICTED: hypothetical protein LOC100626947 [Sus scrofa] Back     alignment and taxonomy information
>gi|358412570|ref|XP_603482.5| PREDICTED: uncharacterized protein LOC525135 [Bos taurus] Back     alignment and taxonomy information
>gi|260841447|ref|XP_002613927.1| hypothetical protein BRAFLDRAFT_56711 [Branchiostoma floridae] gi|229299317|gb|EEN69936.1| hypothetical protein BRAFLDRAFT_56711 [Branchiostoma floridae] Back     alignment and taxonomy information
>gi|334328249|ref|XP_001376793.2| PREDICTED: protein Wnt-4-like [Monodelphis domestica] Back     alignment and taxonomy information
>gi|3127185|gb|AAC80431.1| AmphiWnt4 [Branchiostoma floridae] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query140
ZFIN|ZDB-GENE-030717-2387 wnt2ba "wingless-type MMTV int 0.792 0.286 0.478 1.9e-26
UNIPROTKB|F1MBQ6259 LOC100337066 "Protein Wnt" [Bo 0.785 0.424 0.468 1.8e-25
UNIPROTKB|A8K0G1353 WNT7B "Protein Wnt" [Homo sapi 0.785 0.311 0.460 2.2e-25
UNIPROTKB|B8A595333 WNT7B "Protein Wnt-7b" [Homo s 0.785 0.330 0.460 2.2e-25
UNIPROTKB|P56706349 WNT7B "Protein Wnt-7b" [Homo s 0.785 0.315 0.460 2.2e-25
MGI|MGI:98962349 Wnt7b "wingless-related MMTV i 0.785 0.315 0.460 2.2e-25
RGD|1311441349 Wnt7b "wingless-type MMTV inte 0.785 0.315 0.460 2.2e-25
UNIPROTKB|E9PU66353 Wnt7b "Protein Wnt" [Rattus no 0.785 0.311 0.460 2.2e-25
UNIPROTKB|I3LVH1325 WNT7B "Protein Wnt" [Sus scrof 0.785 0.338 0.460 3.6e-25
ZFIN|ZDB-GENE-060824-6396 wnt2bb "wingless-type MMTV int 0.807 0.285 0.462 3.6e-25
ZFIN|ZDB-GENE-030717-2 wnt2ba "wingless-type MMTV integration site family, member 2Ba" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 57/119 (47%), Positives = 70/119 (58%)

Query:     3 CKCHGVSGTCNIRTCWKSLPSKFIEVGKKLVNEYSRAIEIK-----AGVRTGSLRYSST- 56
             CKCHGVSG+C +RTCW ++P  F   G  L  +Y+ A+E+       G       Y  T 
Sbjct:   233 CKCHGVSGSCALRTCWLAMPD-FRRTGDYLRKKYNAAVEVMMNQDGTGFMVADRDYKRTT 291

Query:    57 -NDLVYVTKSPDYCNFDAKLGSYGTSGRACNKSLTGYAGCESMCCGRGYSTKLIEKIER 114
              NDLVY+  SPDYC  D   GS GTSGR CNKS  G  GCE MCCGRGY T  + ++ +
Sbjct:   292 KNDLVYIENSPDYCLMDRSAGSLGTSGRVCNKSSRGMDGCEIMCCGRGYDTTRVNRMTK 350




GO:0005102 "receptor binding" evidence=IEA
GO:0005576 "extracellular region" evidence=IEA
GO:0016055 "Wnt receptor signaling pathway" evidence=IEA
GO:0007275 "multicellular organismal development" evidence=IEA
GO:0005886 "plasma membrane" evidence=IBA
GO:0005110 "frizzled-2 binding" evidence=IBA
GO:0007223 "Wnt receptor signaling pathway, calcium modulating pathway" evidence=IBA
GO:0009952 "anterior/posterior pattern specification" evidence=IBA
GO:0090190 "positive regulation of branching involved in ureteric bud morphogenesis" evidence=IBA
GO:0005615 "extracellular space" evidence=IBA
GO:0009950 "dorsal/ventral axis specification" evidence=IBA
GO:0060541 "respiratory system development" evidence=IBA
GO:0060070 "canonical Wnt receptor signaling pathway" evidence=IBA
GO:0035118 "embryonic pectoral fin morphogenesis" evidence=IMP
GO:0070654 "sensory epithelium regeneration" evidence=IEP
GO:0005578 "proteinaceous extracellular matrix" evidence=IEA
UNIPROTKB|F1MBQ6 LOC100337066 "Protein Wnt" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|A8K0G1 WNT7B "Protein Wnt" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|B8A595 WNT7B "Protein Wnt-7b" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P56706 WNT7B "Protein Wnt-7b" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:98962 Wnt7b "wingless-related MMTV integration site 7B" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1311441 Wnt7b "wingless-type MMTV integration site family, member 7B" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E9PU66 Wnt7b "Protein Wnt" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|I3LVH1 WNT7B "Protein Wnt" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060824-6 wnt2bb "wingless-type MMTV integration site family, member 2Bb" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query140
pfam00110308 pfam00110, wnt, wnt family 9e-53
smart00097305 smart00097, WNT1, found in Wnt-1 6e-49
>gnl|CDD|215724 pfam00110, wnt, wnt family Back     alignment and domain information
 Score =  168 bits (427), Expect = 9e-53
 Identities = 70/148 (47%), Positives = 92/148 (62%), Gaps = 10/148 (6%)

Query: 2   HCKCHGVSGTCNIRTCWKSLPSKFIEVGKKLVNEYSRAIEIKAGVRTGSLRYS------- 54
            CKCHGVSG+C ++TCWK LP  F EVG  L  +Y  AI+++   R    R         
Sbjct: 162 ECKCHGVSGSCTLKTCWKQLPD-FREVGDLLKEKYDGAIKVEVNNRGKRRRLVRKNPKSK 220

Query: 55  --STNDLVYVTKSPDYCNFDAKLGSYGTSGRACNKSLTGYAGCESMCCGRGYSTKLIEKI 112
             ++ DLVY+  SPDYC  +  LGS GT GR CNK+ +G  GC+ +CCGRGY+T+ +  +
Sbjct: 221 PPTSTDLVYLEDSPDYCERNPSLGSLGTRGRECNKTSSGTDGCDLLCCGRGYNTRTVVVV 280

Query: 113 ERCQCKYHYCCYVKCKICHTWIERQYCN 140
           ERC CK+H+CCYVKCK C   +E   C 
Sbjct: 281 ERCNCKFHWCCYVKCKTCRERVEVYTCK 308


Wnt genes have been identified in vertebrates and invertebrates but not in plants, unicellular eukaryotes or prokaryotes. In humans, 19 WNT proteins are known. Because of their insolubility little is known about Wnt protein structure, but all have 23 or 24 Cys residues whose spacing is highly conserved. Signal transduction by Wnt proteins (including the Wnt/beta-catenin, the Wnt/Ca++, and the Wnt/polarity pathway) is mediated by receptors of the Frizzled and LDL-receptor-related protein (LRP) families. Length = 308

>gnl|CDD|128408 smart00097, WNT1, found in Wnt-1 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 140
KOG3913|consensus356 100.0
smart00097305 WNT1 found in Wnt-1. 100.0
PF00110310 wnt: wnt family; InterPro: IPR005817 Wnt proteins 100.0
>KOG3913|consensus Back     alignment and domain information
Probab=100.00  E-value=1.6e-64  Score=425.59  Aligned_cols=139  Identities=50%  Similarity=1.136  Sum_probs=131.6

Q ss_pred             CcceecCccCCccchhhhccCChhHHHHHHHHHHhhccceeeec---Cc--------ccCccCCCCCCceEEEcCCCCCc
Q psy9730           1 MHCKCHGVSGTCNIRTCWKSLPSKFIEVGKKLVNEYSRAIEIKA---GV--------RTGSLRYSSTNDLVYVTKSPDYC   69 (140)
Q Consensus         1 ~~CkChGvSGSC~~ktCw~~lp~~f~~ig~~Lk~kY~~A~~v~~---g~--------~~~~~~~~~~~dLVYl~~SPdyC   69 (140)
                      ++||||||||||++||||++||+ |++||++||+||++|++|..   |.        ....+++|+++||||+|+|||||
T Consensus       207 ~~CKCHGvSGSC~~KTCW~~lp~-Fr~vG~~Lk~KYd~A~~V~~~~~~~~~~~~~~~~~~~~~~~~~~dLVYle~SPdfC  285 (356)
T KOG3913|consen  207 RECKCHGVSGSCTVKTCWKQLPD-FREVGDYLKEKYDGAIKVTVNNRGRRSAPALRPEKPRFKPPTETDLVYLEDSPDYC  285 (356)
T ss_pred             hcccccCccccchhhhHHhhCcc-HHHHHHHHHHHhhhheEEeeccCCccccccccccccccCCCCCCceEEecCCChhh
Confidence            47999999999999999999999 99999999999999999982   21        23456788899999999999999


Q ss_pred             ccCCCCcCCCCCCCeecCCCCCcCCCcccccCCCeeEEEEEEEEeeCcEEEeeeEEECccceeEEEEEEeC
Q psy9730          70 NFDAKLGSYGTSGRACNKSLTGYAGCESMCCGRGYSTKLIEKIERCQCKYHYCCYVKCKICHTWIERQYCN  140 (140)
Q Consensus        70 ~~d~~~g~~GT~GR~C~~~s~~~~~C~~lCCGrGy~~~~~~~~~~CnCkF~WCC~V~C~~C~~~~~~~~C~  140 (140)
                      ++|+..||+||+||+||.+|.+.|+|++|||||||++..++++|+|||||||||+|+|++|.+++++|+||
T Consensus       286 ~~~~~~Gs~GT~GR~Cn~ts~g~dgC~~LCCGRGynt~~~~~~e~C~CkFhWCC~V~C~~C~~~~~v~tCk  356 (356)
T KOG3913|consen  286 ERNKKTGSLGTQGRECNKTSRGSDGCDLLCCGRGYNTRRVEVVERCHCKFHWCCYVKCKECRERVEVYTCK  356 (356)
T ss_pred             ccCccCCCCCCCCcccCCCCCCCCCCccccCCCCCceeEEEEEEecCCEEEEeeEEECcccccEEEeeecC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999997



>smart00097 WNT1 found in Wnt-1 Back     alignment and domain information
>PF00110 wnt: wnt family; InterPro: IPR005817 Wnt proteins constitute a large family of secreted molecules that are involved in intercellular signalling during development Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query140
4f0a_B316 Crystal Structure Of Xwnt8 In Complex With The Cyst 3e-11
>pdb|4F0A|B Chain B, Crystal Structure Of Xwnt8 In Complex With The Cysteine-Rich Domain Of Frizzled 8 Length = 316 Back     alignment and structure

Iteration: 1

Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 15/114 (13%) Query: 3 CKCHGVSGTCNIRTCWKSLPSKFIEVGKKLVNEYSRAIEIKAGVRTGSLRYSSTN----- 57 CKCHG+SG+C+I+TCW L ++F ++G L ++ +A++++ R S+ N Sbjct: 159 CKCHGISGSCSIQTCWLQL-AEFRDIGNHLKIKHDQALKLEMDKRKMRSGNSADNRGAIA 217 Query: 58 ---------DLVYVTKSPDYCNFDAKLGSYGTSGRACNKSLTGYAGCESMCCGR 102 +L+++ SPDYC + LG GT GR C +S + E C R Sbjct: 218 DAFSSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGKNLSQWERRSCKR 271

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query140
4f0a_B316 Protein WNT-8, XWNT-8; WNT signaling, ligand-recep 5e-29
>4f0a_B Protein WNT-8, XWNT-8; WNT signaling, ligand-receptor complex, frizzled, fatty acylation, glycosylation, signaling protein; HET: NAG BMA MAN FUC PAM; 3.25A {Xenopus laevis} Length = 316 Back     alignment and structure
 Score =  106 bits (265), Expect = 5e-29
 Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 22/160 (13%)

Query: 1   MHCKCHGVSGTCNIRTCWKSLPSKFIEVGKKLVNEYSRAIEIKAGVRTGSLRYS------ 54
             CKCHG+SG+C+I+TCW  L   F ++G  L  ++ +A++++   R      S      
Sbjct: 157 RTCKCHGISGSCSIQTCWLQLAE-FRDIGNHLKIKHDQALKLEMDKRKMRSGNSADNRGA 215

Query: 55  --------STNDLVYVTKSPDYCNFDAKLGSYGTSGRACNKSLTGY-----AGCESMCC- 100
                   + ++L+++  SPDYC  +  LG  GT GR C +S           C+ +C  
Sbjct: 216 IADAFSSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGKNLSQWERRSCKRLCTD 275

Query: 101 -GRGYSTKLIEKIERCQCKYHYCCYVKCKICHTWIERQYC 139
            G     K  E I  C CK+H+CC VKC+ C   + + +C
Sbjct: 276 CGLRVEEKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHFC 315


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query140
4f0a_B316 Protein WNT-8, XWNT-8; WNT signaling, ligand-recep 100.0
>4f0a_B Protein WNT-8, XWNT-8; WNT signaling, ligand-receptor complex, frizzled, fatty acylation, glycosylation, signaling protein; HET: NAG BMA MAN FUC PAM; 3.25A {Xenopus laevis} Back     alignment and structure
Probab=100.00  E-value=4.2e-63  Score=412.70  Aligned_cols=139  Identities=36%  Similarity=0.887  Sum_probs=128.7

Q ss_pred             CcceecCccCCccchhhhccCChhHHHHHHHHHHhhccceeeec-------Cc-------ccCccCCCCCCceEEEcCCC
Q psy9730           1 MHCKCHGVSGTCNIRTCWKSLPSKFIEVGKKLVNEYSRAIEIKA-------GV-------RTGSLRYSSTNDLVYVTKSP   66 (140)
Q Consensus         1 ~~CkChGvSGSC~~ktCw~~lp~~f~~ig~~Lk~kY~~A~~v~~-------g~-------~~~~~~~~~~~dLVYl~~SP   66 (140)
                      ++||||||||||++||||++||+ |++||+.||+||++|++|..       |+       ....+++|+.+||||||+||
T Consensus       157 ~~CKCHGvSGSCt~KTCW~~lp~-Fr~VG~~LK~kyd~A~~V~~~~~~~~~~~~~~~~~~~~~~~k~p~~~dLVYle~SP  235 (316)
T 4f0a_B          157 RTCKCHGISGSCSIQTCWLQLAE-FRDIGNHLKIKHDQALKLEMDKRKMRSGNSADNRGAIADAFSSVAGSELIFLEDSP  235 (316)
T ss_dssp             EEEEECSGGGCTTSEEEEEECCC-HHHHHHHHHHHHHTCEECCC-------------CHHHHHHHHTSCSSSCEECSCCC
T ss_pred             eeeecCCccccccceehcccCCC-HHHHHHHHHHHhhhheEeeecccccccccccccccccccccCCCCCCCeEEeCCCC
Confidence            37999999999999999999999 99999999999999999972       11       01124678899999999999


Q ss_pred             CCcccCCCCcCCCCCCCeecCCCCCc-----CCCcccc--cCCCeeEEEEEEEEeeCcEEEeeeEEECccceeEEEEEEe
Q psy9730          67 DYCNFDAKLGSYGTSGRACNKSLTGY-----AGCESMC--CGRGYSTKLIEKIERCQCKYHYCCYVKCKICHTWIERQYC  139 (140)
Q Consensus        67 dyC~~d~~~g~~GT~GR~C~~~s~~~-----~~C~~lC--CGrGy~~~~~~~~~~CnCkF~WCC~V~C~~C~~~~~~~~C  139 (140)
                      |||++|+.+||+||+||+||++|.+.     |+|++||  |||||+|++++++|+|||||||||+|+|++|.+++++|+|
T Consensus       236 dfC~~n~~~Gs~GT~GR~Cn~tS~g~s~~~~dgCdlLC~~CGRGy~t~~~~~~erC~CkF~WCC~V~C~~C~~~~~~~~C  315 (316)
T 4f0a_B          236 DYCLKNISLGLQGTEGRECLQSGKNLSQWERRSCKRLCTDCGLRVEEKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHFC  315 (316)
T ss_dssp             CTTSEETTTTEECSTTCEECCCCTTCCHHHHTHHHHHTGGGTCCEEEEEEEEEEECSCBCCSSSCCBCCEEEEEEEEEEE
T ss_pred             cccccCCCCCCCCCCCcccCCCCCCCcCCCCCCHHHHHHhcCCceeEEEEEEEEeeCCEEEeeeEEECCcCCeEEEEEEe
Confidence            99999999999999999999999998     9999999  9999999999999999999999999999999999999999


Q ss_pred             C
Q psy9730         140 N  140 (140)
Q Consensus       140 ~  140 (140)
                      .
T Consensus       316 ~  316 (316)
T 4f0a_B          316 A  316 (316)
T ss_dssp             C
T ss_pred             C
Confidence            4




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00