Psyllid ID: psy9800

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480------
MEDKMMGTFGAYVEIKYKDTAIYLVTSLASQGSTVKHGTTKSSTLVNLEDFAQQHIFPELNKPDELCPNELLSPHLKQIFVLLFQRLSSSKTAKYSKVSHLESAHPVVHSYASHAIDRVLVMRSPNGQGTLVTADVLAPLAADLYKNLLVIFTRPGSEENEYAMKCIMRSMSTLQDKVVPYLSDLLFQLTQRLAAAAKNPSKPNYNHFLFEAITLAIRIVCKQNPEAVATFEQALFPIFQVIIQQDTLEFLPYTFQILSLLLEFRPRGSISAPYLELYPFLLSPVLWSRPGNIHPLVRLLRAFITKSEPSQFSATLKLNNVLGVFQKLIASKIFVLLFQRLSSSKTAKYSKGLVTFLMFYVINMGATSLIQLIDSIQGSLFSMVAEKLILADLQKVSGAVNRKIAAFGLAKLLTEAKEVTEGPYVQAPLTGALLNLIQLPEDDSTQPEDHFVDIENILEYDAAYSKLTFAADKEEYDPLSDIIQVK
cHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccEEEcccccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccc
cHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccEccccccHHHHHHHHHHHHHHccccccccEEHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccEHHHHHHHHHHHHHHccccccccEEccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcHHHHHcccccHHHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcHHHHHHHHEEcccHHHcccHHHHHHHHHHHHHHHHccHHHHccHHHHHHHHHHHHHHHHccccccccccHcHccHHccccccHHHHHHHHccccccccccccccccc
MEDKMMGTFGAYVEIKYKDTAIYLVTSLasqgstvkhgttksstlvnledfaqqhifpelnkpdelcpnellspHLKQIFVLLFQRLsssktakyskvshlesahpvvhsyashaIDRVlvmrspngqgtlvtADVLAPLAADLYKNLLVIFtrpgseenEYAMKCIMRSMSTLQDKVVPYLSDLLFQLTQRLAAAaknpskpnynhFLFEAITLAIRIVCKQNPEAVATFEQALFPIFQVIIQQDTLEFLPYTFQILSLLLEfrprgsisapylelypfllspvlwsrpgnihPLVRLLRAFItksepsqfsaTLKLNNVLGVFQKLIASKIFVLLFQRlsssktakyskGLVTFLMFYVINMGATSLIQLIDSIQGSLFSMVAEKLILADLQKVSGAVNRKIAAFGLAKLLTEakevtegpyvqaplTGALLNLiqlpeddstqpedhfvdIENILEYDAAYSKltfaadkeeydplsdiiqvk
MEDKMMGTFGAYVEIKYKDTAIYLVTSlasqgstvkhgtTKSSTLVNLEDFAQQHIFPELNKPDELCPNELLSPHLKQIFVLLFQRLSSSKTAKYSKVSHLESAHPVVHSYASHAIDRVLVMRSPNGQGTLVTADVLAPLAADLYKNLLVIFTRPGSEENEYAMKCIMRSMSTLQDKVVPYLSDLLFQLTQRLAAAAKNPSKPNYNHFLFEAITLAIRIVCKQNPEAVATFEQALFPIFQVIIQQDTLEFLPYTFQILSLLLEFRPRGSISAPYLELYPFLLSPVLWSRPGNIHPLVRLLRAFITKSEPSQFSATLKLNNVLGVFQKLIASKIFVLLFQRLSSSKTAKYSKGLVTFLMFYVINMGATSLIQLIDSIQGSLFSMVAEKLILADLQKVSGAVNRKIAAFGLAKLLTEAKEVTEGPYVQAPLTGALLNLIQLPEDDSTQPEDHFVDIENILEYDAAYSKLTfaadkeeydplsdiiqvk
MEDKMMGTFGAYVEIKYKDTAIYLVTSLASQGSTVKHGTTKSSTLVNLEDFAQQHIFPELNKPDELCPNELLSPHLKQIFVLLFQRLSSSKTAKYSKVSHLESAHPVVHSYASHAIDRVLVMRSPNGQGTLVTADVLAPLAADLYKNLLVIFTRPGSEENEYAMKCIMRSMSTLQDKVVPYLSDLLFQLTQRLAAAAKNPSKPNYNHFLFEAITLAIRIVCKQNPEAVATFEQALFPIFQVIIQQDTLEFLPYTFQILSLLLEFRPRGSISAPYLELYPFLLSPVLWSRPGNIHPLVRLLRAFITKSEPSQFSATLKLNNVLGVFQKLIASKIFVLLFQRLSSSKTAKYSKGLVTFLMFYVINMGATSLIQLIDSIQGSLFSMVAEKLILADLQKVSGAVNRKIAAFGLAKLLTEAKEVTEGPYVQAPLTGALLNLIQLPEDDSTQPEDHFVDIENILEYDAAYSKLTFAADKEEYDPLSDIIQVK
******GTFGAYVEIKYKDTAIYLVTSLASQGSTV*******STLVNLEDFAQQHIFPELNKPDELCPNELLSPHLKQIFVLLFQRLSSS*TAKYSKVSHLESAHPVVHSYASHAIDRVLVMRSPNGQGTLVTADVLAPLAADLYKNLLVIFTRPGSEENEYAMKCIMRSMSTLQDKVVPYLSDLLFQLTQRLAAAAKNPSKPNYNHFLFEAITLAIRIVCKQNPEAVATFEQALFPIFQVIIQQDTLEFLPYTFQILSLLLEFRPRGSISAPYLELYPFLLSPVLWSRPGNIHPLVRLLRAFITKSEPSQFSATLKLNNVLGVFQKLIASKIFVLLFQRLSSSKTAKYSKGLVTFLMFYVINMGATSLIQLIDSIQGSLFSMVAEKLILADLQKVSGAVNRKIAAFGLAKLLTEAKEVTEGPYVQAPLTGALLNLIQLP********DHFVDIENILEYDAAYSKLTFAAD**************
***KMMGTFGAYVEIKYKDTAIYLVTSLASQGSTVKHGTTKSSTLVNLEDFAQQHIFPELNKPDELCPNELLSPHLKQIFVLLFQRLSSSKTAKYSKVSHLESAHPVVHSYASHAIDRVLVMRSPNGQGTLVTADVLAPLAADLYKNLLVIFTRPGSEENEYAMKCIMRSMSTLQDKVVPYLSDLLFQLTQRLAAAAKNPSKPNYNHFLFEAITLAIRIVCKQNPEAVATFEQALFPIFQVIIQQDTLEFLPYTFQILSLLLEFRPRGSISAPYLELYPFLLSPVLWSRPGNIHPLVRLLRAFITKSEPSQFSATLKLNNVLGVFQKLIASKIFVLLFQRLSSSKTAKYSKGLVTFLMFYVINMGATSLIQLIDSIQGSLFSMVAEKLILADLQKVSGAVNRKIAAFGLAKLLTEAKEVTEGPYVQAPLTGALLNL****************DIENILEYDAAYSKLTFAADKEEYDPLSDII*V*
MEDKMMGTFGAYVEIKYKDTAIYLVTSLASQGSTVKHGTTKSSTLVNLEDFAQQHIFPELNKPDELCPNELLSPHLKQIFVLLFQRLSSSKTAKYSKVSHLESAHPVVHSYASHAIDRVLVMRSPNGQGTLVTADVLAPLAADLYKNLLVIFTRPGSEENEYAMKCIMRSMSTLQDKVVPYLSDLLFQLTQRLAAAAKNPSKPNYNHFLFEAITLAIRIVCKQNPEAVATFEQALFPIFQVIIQQDTLEFLPYTFQILSLLLEFRPRGSISAPYLELYPFLLSPVLWSRPGNIHPLVRLLRAFITKSEPSQFSATLKLNNVLGVFQKLIASKIFVLLFQRLSSSKTAKYSKGLVTFLMFYVINMGATSLIQLIDSIQGSLFSMVAEKLILADLQKVSGAVNRKIAAFGLAKLLTEAKEVTEGPYVQAPLTGALLNLIQLPEDDSTQPEDHFVDIENILEYDAAYSKLTFAADKEEYDPLSDIIQVK
MEDKMMGTFGAYVEIKYKDTAIYLVTSLASQGSTVKHGTTKSSTLVNLEDFAQQHIFPELNKPDELCPNELLSPHLKQIFVLLFQRLSSSKTAKYSKVSHLESAHPVVHSYASHAIDRVLVMRSPNGQGTLVTADVLAPLAADLYKNLLVIFTRPGSEENEYAMKCIMRSMSTLQDKVVPYLSDLLFQLTQRLAAAAKNPSKPNYNHFLFEAITLAIRIVCKQNPEAVATFEQALFPIFQVIIQQDTLEFLPYTFQILSLLLEFRPRGSISAPYLELYPFLLSPVLWSRPGNIHPLVRLLRAFITKSEPSQFSATLKLNNVLGVFQKLIASKIFVLLFQRLSSSKTAKYSKGLVTFLMFYVINMGATSLIQLIDSIQGSLFSMVAEKLILADLQKVSGAVNRKIAAFGLAKLLTEAKEVTEGPYVQAPLTGALLNLIQLPE***T*PEDHFVDIENILEYDAAYSKLTFAADKEEYDPLSDI****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MEDKMMGTFGAYVEIKYKDTAIYLVTSLASQGSTVKHGTTKSSTLVNLEDFAQQHIFPELNKPDELCPNELLSPHLKQIFVLLFQRLSSSKTAKYSKVSHLESAHPVVHSYASHAIDRVLVMRSPNGQGTLVTADVLAPLAADLYKNLLVIFTRPGSEENEYAMKCIMRSMSTLQDKVVPYLSDLLFQLTQRLAAAAKNPSKPNYNHFLFEAITLAIRIVCKQNPEAVATFEQALFPIFQVIIQQDTLEFLPYTFQILSLLLEFRPRGSISAPYLELYPFLLSPVLWSRPGNIHPLVRLLRAFITKSEPSQFSATLKLNNVLGVFQKLIASKIFVLLFQRLSSSKTAKYSKGLVTFLMFYVINMGATSLIQLIDSIQGSLFSMVAEKLILADLQKVSGAVNRKIAAFGLAKLLTEAKEVTEGPYVQAPLTGALLNLIQLPEDDSTQPEDHFVDIENILEYDAAYSKLTFAADKEEYDPLSDIIQVK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query486 2.2.26 [Sep-21-2011]
Q8AY73971 Exportin-2 OS=Oreochromis yes N/A 0.946 0.473 0.459 1e-116
P55060971 Exportin-2 OS=Homo sapien yes N/A 0.954 0.477 0.451 1e-113
A5D785971 Exportin-2 OS=Bos taurus yes N/A 0.954 0.477 0.451 1e-113
Q9ERK4971 Exportin-2 OS=Mus musculu yes N/A 0.954 0.477 0.453 1e-113
Q5R9J2971 Exportin-2 OS=Pongo abeli yes N/A 0.954 0.477 0.449 1e-112
Q7SZC2971 Exportin-2 OS=Danio rerio yes N/A 0.952 0.476 0.448 1e-112
Q9PTU3971 Exportin-2 OS=Pagrus majo N/A N/A 0.946 0.473 0.451 1e-112
Q6GMY9971 Exportin-2 OS=Xenopus lae N/A N/A 0.958 0.479 0.433 1e-109
Q9XZU1975 Exportin-2 OS=Drosophila yes N/A 0.888 0.443 0.419 2e-96
Q9ZPY7972 Exportin-2 OS=Arabidopsis yes N/A 0.962 0.481 0.312 1e-62
>sp|Q8AY73|XPO2_ORENI Exportin-2 OS=Oreochromis niloticus GN=cse1l PE=2 SV=1 Back     alignment and function desciption
 Score =  419 bits (1077), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 232/505 (45%), Positives = 317/505 (62%), Gaps = 45/505 (8%)

Query: 16  KYKDTAIYLVTSLASQGSTVKHGTTKSSTLVNLEDFAQQHIFPELNKPDELCPNELLSPH 75
           K+KD AIYLVTSLAS+  T KHG T+++ LVNL +F   HI P+L  P+    NE   P 
Sbjct: 425 KHKDAAIYLVTSLASKAQTQKHGITQANELVNLTEFFVNHILPDLKSPN---VNEF--PV 479

Query: 76  LKQ---IFVLLFQ-RLSSSKTAKYSK--VSHLESAHPVVHSYASHAIDRVLVMRSPNGQG 129
           LK     +V++F+ +L   +  +     ++HL++   V H+YA+HA++R+  MR PN   
Sbjct: 480 LKADAIKYVMIFRSQLPKEQLLQAVPLLITHLQAESTVEHTYAAHALERLFTMRGPNN-A 538

Query: 130 TLVTADVLAPLAADLYKNLLVIFTRPGSEENEYAMKCIMRSMSTLQDKVVPYLSDLLFQL 189
           TL+TA  +AP    L  NL      PGS ENEY MK IMRS S LQ+ +VPY+  L+ QL
Sbjct: 539 TLITAAEMAPFTEQLLNNLFKALAFPGSAENEYIMKAIMRSFSLLQESIVPYIPTLIGQL 598

Query: 190 TQRLAAAAKNPSKPNYNHFLFEAITLAIRIVCKQNPEAVATFEQALFPIFQVIIQQDTLE 249
           T +L   +KNPSKP++NH+LFE++ L++RI CK NP  V++FE+ALFP+F  I+Q D  E
Sbjct: 599 THKLLQVSKNPSKPHFNHYLFESLCLSVRITCKANPTTVSSFEEALFPVFTEILQNDVQE 658

Query: 250 FLPYTFQILSLLLEFRPRGSISAPYLELYPFLLSPVLWSRPGNIHPLVRLLRAFITK-SE 308
           FLPY FQ++SLLLE     SI A Y+ L+P LL PVLW R GNI PLVRLL+A++ K  E
Sbjct: 659 FLPYVFQVMSLLLEIH-SNSIPASYMALFPHLLQPVLWERTGNIPPLVRLLQAYLEKGGE 717

Query: 309 PSQFSATLKLNNVLGVFQKLIASK----------------------------IFVLLFQR 340
               SA  K+  +LGVFQKLIASK                            IF+LLFQR
Sbjct: 718 TIARSAADKIPGLLGVFQKLIASKANDHQGFYLLNSIIEHMPPESLTQYRKQIFILLFQR 777

Query: 341 LSSSKTAKYSKGLVTFLMFYVINMGATSLIQLIDSIQGSLFSMVAEKLILADLQKVSGAV 400
           L SSKT K+ K  + F+  Y +  GA +L ++ DSIQ  +F MV EK+++ ++QKVSG V
Sbjct: 778 LQSSKTTKFIKSFLVFVNLYCVKYGAIALQEIFDSIQPKMFGMVLEKIVIPEVQKVSGPV 837

Query: 401 NRKIAAFGLAKLLTEAKEVTEGPYVQ--APLTGALLNLIQLPEDDSTQPEDHFVDIENIL 458
            +KI A G+ K+LTE   + +  Y +   PL  AL+ L +LPEDDS   ++HF+DIE+  
Sbjct: 838 EKKICAVGITKVLTECPAMMDTEYTKLWTPLLQALIGLFELPEDDSIPDDEHFIDIEDTP 897

Query: 459 EYDAAYSKLTFAADKEEYDPLSDII 483
            Y  A+S+L FA  K+E+DP+ D +
Sbjct: 898 GYQTAFSQLAFAG-KKEHDPIGDAV 921
Export receptor for importin alpha. Mediates importin-alpha re-export from the nucleus to the cytoplasm after import substrates have been released into the nucleoplasm.
Oreochromis niloticus (taxid: 8128)
>sp|P55060|XPO2_HUMAN Exportin-2 OS=Homo sapiens GN=CSE1L PE=1 SV=3 Back     alignment and function description
>sp|A5D785|XPO2_BOVIN Exportin-2 OS=Bos taurus GN=CSE1L PE=2 SV=1 Back     alignment and function description
>sp|Q9ERK4|XPO2_MOUSE Exportin-2 OS=Mus musculus GN=Cse1l PE=2 SV=1 Back     alignment and function description
>sp|Q5R9J2|XPO2_PONAB Exportin-2 OS=Pongo abelii GN=CSE1L PE=2 SV=1 Back     alignment and function description
>sp|Q7SZC2|XPO2_DANRE Exportin-2 OS=Danio rerio GN=cse1l PE=2 SV=1 Back     alignment and function description
>sp|Q9PTU3|XPO2_PAGMA Exportin-2 OS=Pagrus major GN=cse1l PE=2 SV=1 Back     alignment and function description
>sp|Q6GMY9|XPO2_XENLA Exportin-2 OS=Xenopus laevis GN=cse1l PE=2 SV=1 Back     alignment and function description
>sp|Q9XZU1|XPO2_DROME Exportin-2 OS=Drosophila melanogaster GN=Cas PE=2 SV=2 Back     alignment and function description
>sp|Q9ZPY7|XPO2_ARATH Exportin-2 OS=Arabidopsis thaliana GN=CAS PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query486
156543249 967 PREDICTED: exportin-2-like [Nasonia vitr 0.981 0.493 0.465 1e-122
307197940 967 Exportin-2 [Harpegnathos saltator] 0.981 0.493 0.463 1e-120
328712865 773 PREDICTED: exportin-2-like [Acyrthosipho 0.983 0.618 0.439 1e-119
170052536 973 importin alpha re-exporter [Culex quinqu 0.983 0.491 0.442 1e-118
157119633 972 importin (ran-binding protein) [Aedes ae 0.981 0.490 0.446 1e-116
322799344 967 hypothetical protein SINV_80183 [Solenop 0.981 0.493 0.454 1e-115
31204951 972 AGAP010711-PA [Anopheles gambiae str. PE 0.981 0.490 0.448 1e-115
427792703 972 Putative nuclear export receptor cse1/ca 0.969 0.484 0.459 1e-115
405964897 968 Exportin-2 [Crassostrea gigas] 0.950 0.477 0.454 1e-114
348507893 971 PREDICTED: exportin-2 [Oreochromis nilot 0.946 0.473 0.459 1e-114
>gi|156543249|ref|XP_001606668.1| PREDICTED: exportin-2-like [Nasonia vitripennis] Back     alignment and taxonomy information
 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 249/535 (46%), Positives = 337/535 (62%), Gaps = 58/535 (10%)

Query: 2   EDKMMGTFGAYVE-------------IKYKDTAIYLVTSLASQGSTVKHGTTKSSTLVNL 48
           E K+M  FGAY++              + KD AIYLVTS AS+G T KHG T+SS LV L
Sbjct: 399 EAKIMEIFGAYIQAMLQNYVAKPAENWRSKDAAIYLVTSSASKGQTQKHGVTQSSDLVPL 458

Query: 49  EDFAQQHIFPELNKPDELCPNELLSPHLKQ---IFVLLFQRLSSSKTAKYS---KVSHLE 102
             FA  HI PEL KPD    NE   P LK     F+++F+ +   +    S    + HL 
Sbjct: 459 PQFAAGHIEPELAKPDV---NEF--PVLKADAIKFIMIFRSILPREQVVGSLPQMIRHLA 513

Query: 103 SAHPVVHSYASHAIDRVLVMRSPNGQGTLVTADVLAPLAADLYKNLLVIFTRPGSEENEY 162
           +  PVVHSYA+ AI+++L ++ PN    LV    +APLAADL K L  +   PGSEENEY
Sbjct: 514 ATSPVVHSYAACAIEKILALKGPNNVA-LVKGTDIAPLAADLLKCLFAVLDSPGSEENEY 572

Query: 163 AMKCIMRSMSTLQDKVVPYLSDLLFQLTQRLAAAAKNPSKPNYNHFLFEAITLAIRIVCK 222
            MK IMRS +TLQD VVP+L+DLL +LTQ+L   A+NPS+PN+NH+LFE ++++I+IVCK
Sbjct: 573 IMKAIMRSFATLQDAVVPFLADLLPKLTQKLEIVARNPSRPNFNHYLFETLSISIKIVCK 632

Query: 223 QNPEAVATFEQALFPIFQVIIQQDTLEFLPYTFQILSLLLEFRPRGSISAPYLELYPFLL 282
            NP+AVA+FEQALFP FQ I+QQD  EF+PY FQIL+LLLE +    +   Y+ L+P LL
Sbjct: 633 SNPKAVASFEQALFPTFQGILQQDIQEFIPYVFQILALLLELQTANDVPESYMALFPCLL 692

Query: 283 SPVLWSRPGNIHPLVRLLRAFITKSEPSQFSATLKLNNVLGVFQKLIASK---------- 332
           +PVL+ R GNIHPL RLL+AF++     Q  A  K+N +LGVFQKLIAS+          
Sbjct: 693 APVLFERQGNIHPLNRLLQAFVSHGA-HQIIAQEKINALLGVFQKLIASRTNDHEGFLLM 751

Query: 333 ------------------IFVLLFQRLSSSKTAKYSKGLVTFLMFYVINMGATSLIQLID 374
                             +F+LLFQRLSSSKT K+ KGL+ F  +YV+  GA++L+ +ID
Sbjct: 752 QAIIERFPPNALEPYIKQVFILLFQRLSSSKTTKFVKGLIVFFSYYVVRYGASNLVTMID 811

Query: 375 SIQGSLFSMVAEKLILADLQKVSGAVNRKIAAFGLAKLLTEAKEVTEGPY--VQAPLTGA 432
           SIQ  +F MV ++++L DLQKVSG + RK+ A G++ +L +   + + PY      L  A
Sbjct: 812 SIQPQMFGMVVDRVLLTDLQKVSGEIERKVTAVGVSNILIDCPAMLQSPYNAFYPRLLAA 871

Query: 433 LLNLIQLPEDDSTQPEDHFV-DIENILEYDAAYSKLTFAADKEEYDPLSDIIQVK 486
           L+   +LP D++  PED  V +I++   Y AAYS+L FA +  + DPL  +  V+
Sbjct: 872 LVEFFELPHDETQLPEDQQVLEIDDNSGYQAAYSQLIFARNP-KVDPLPTVTDVR 925

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|307197940|gb|EFN79025.1| Exportin-2 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|328712865|ref|XP_001942780.2| PREDICTED: exportin-2-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|170052536|ref|XP_001862266.1| importin alpha re-exporter [Culex quinquefasciatus] gi|167873421|gb|EDS36804.1| importin alpha re-exporter [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|157119633|ref|XP_001653427.1| importin (ran-binding protein) [Aedes aegypti] gi|108875236|gb|EAT39461.1| AAEL008741-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|322799344|gb|EFZ20732.1| hypothetical protein SINV_80183 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|31204951|ref|XP_311424.1| AGAP010711-PA [Anopheles gambiae str. PEST] gi|21294929|gb|EAA07074.1| AGAP010711-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|427792703|gb|JAA61803.1| Putative nuclear export receptor cse1/cas importin beta superfamily, partial [Rhipicephalus pulchellus] Back     alignment and taxonomy information
>gi|405964897|gb|EKC30336.1| Exportin-2 [Crassostrea gigas] Back     alignment and taxonomy information
>gi|348507893|ref|XP_003441490.1| PREDICTED: exportin-2 [Oreochromis niloticus] gi|82133773|sp|Q8AY73.1|XPO2_ORENI RecName: Full=Exportin-2; Short=Exp2; AltName: Full=Cellular apoptosis susceptibility protein; AltName: Full=Chromosome segregation 1-like protein; AltName: Full=Importin-alpha re-exporter gi|24266849|gb|AAN52370.1| cellular apoptosis susceptibility protein [Oreochromis niloticus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query486
FB|FBgn0022213975 Cas "CAS/CSE1 segregation prot 0.738 0.368 0.432 1.3e-92
ZFIN|ZDB-GENE-990603-1971 cse1l "chromosome segregation 0.798 0.399 0.421 4.6e-76
UNIPROTKB|F1MWN1971 CSE1L "Exportin-2" [Bos taurus 0.724 0.362 0.454 3.1e-74
UNIPROTKB|E1BV44971 CSE1L "Uncharacterized protein 0.792 0.396 0.425 4e-74
UNIPROTKB|F1Q1V0973 CSE1L "Uncharacterized protein 0.724 0.361 0.454 4e-74
UNIPROTKB|B4DUC5754 CSE1L "Exportin-2" [Homo sapie 0.724 0.466 0.454 4e-74
UNIPROTKB|F8W904915 CSE1L "Exportin-2" [Homo sapie 0.724 0.384 0.454 4e-74
UNIPROTKB|P55060971 CSE1L "Exportin-2" [Homo sapie 0.724 0.362 0.454 4e-74
RGD|1307536971 Cse1l "CSE1 chromosome segrega 0.724 0.362 0.457 5.1e-74
UNIPROTKB|A5D785971 CSE1L "Exportin-2" [Bos taurus 0.724 0.362 0.454 6.5e-74
FB|FBgn0022213 Cas "CAS/CSE1 segregation protein" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 718 (257.8 bits), Expect = 1.3e-92, Sum P(2) = 1.3e-92
 Identities = 170/393 (43%), Positives = 233/393 (59%)

Query:     2 EDKMMGTFGAYVE---IKYK----------DTAIYLVTSLASQGSTVKHGTTKSSTLVNL 48
             E K+ G FG Y+E    KYK          DTAIYLVTS AS+G T KHG T++S LV L
Sbjct:   401 EQKIFGIFGQYLERLLTKYKENPATNWRSKDTAIYLVTSWASRGGTQKHGITQTSELVPL 460

Query:    49 EDFAQQHIFPELNKPDELCPNELLSPHLKQI---FVLLFQRLSSSKTAKY---SKVSHLE 102
              +F  Q I PEL +P+    NE   P LK     +V++F+ +   +         + HL 
Sbjct:   461 PEFCAQQIIPELERPNI---NEF--PVLKAAAIKYVMVFRSILGPQVLASCLPQLIRHLP 515

Query:   103 SAHPVVHSYASHAIDRVLVMRSPNGQGTLVTADVLAPLAADLYKNLLVIFTRPGSEENEY 162
             +   VVHSYA+ +++++L MR  +    +    +LAP   +L   L    + PGS ENEY
Sbjct:   516 AESSVVHSYAACSVEKILSMRDASN-AIVFGPQILAPYTTELISGLFATLSLPGSGENEY 574

Query:   163 AMKCIMRSMSTLQDKVVPYLSDLLFQLTQRLAAAAKNPSKPNYNHFLFEAITLAIRIVCK 222
              MK IMRS S LQ   +P++   L +LT+ L   AKNPS+P +NH+LFE + L I+IVC 
Sbjct:   575 VMKAIMRSFSVLQSAAMPFMGVALPRLTEILTQVAKNPSRPQFNHYLFETLALCIKIVCH 634

Query:   223 QNPEAVATFEQALFPIFQVIIQQDTLEFLPYTFQILSLLLEFRP-RGSISAPYLELYPFL 281
              +  AV++FE+ALFP+FQ I+QQD +EF+PY FQ+LS+LLE R   G+I  PY  L+P L
Sbjct:   635 ADSSAVSSFEEALFPVFQGILQQDIVEFMPYVFQMLSVLLEMREGTGTIPEPYWALFPCL 694

Query:   282 LSPVLWSRPGNIHPLVRLLRAFITKSEPSQFSATLKLNNVLGVFQKLIASKI-----FVL 336
             LSP LW R GN+ PL+RL+ AFI K   +Q  A  KL+ +LG+FQK+IASK      F L
Sbjct:   695 LSPALWDRTGNVTPLIRLISAFI-KQGSAQIQALGKLSGILGIFQKMIASKANDHEGFYL 753

Query:   337 LFQRLSSSKTAKYSKGL--VTFLMFYVINMGAT 367
             L   LS    A+    L  +  L+F  +++  T
Sbjct:   754 LQNLLSYYPPAEIQTNLRQIFGLLFQRLSLSKT 786
GO:0006915 "apoptotic process" evidence=ISS
GO:0006606 "protein import into nucleus" evidence=NAS
GO:0008262 "importin-alpha export receptor activity" evidence=NAS
GO:0006611 "protein export from nucleus" evidence=NAS;IMP
GO:0005634 "nucleus" evidence=NAS
GO:0005737 "cytoplasm" evidence=NAS
GO:0008565 "protein transporter activity" evidence=IEA
GO:0005643 "nuclear pore" evidence=IEA
GO:0006911 "phagocytosis, engulfment" evidence=IMP
GO:0051533 "positive regulation of NFAT protein import into nucleus" evidence=IMP
GO:0022008 "neurogenesis" evidence=IMP
ZFIN|ZDB-GENE-990603-1 cse1l "chromosome segregation 1-like (S. cerevisiae)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1MWN1 CSE1L "Exportin-2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E1BV44 CSE1L "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q1V0 CSE1L "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|B4DUC5 CSE1L "Exportin-2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F8W904 CSE1L "Exportin-2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P55060 CSE1L "Exportin-2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1307536 Cse1l "CSE1 chromosome segregation 1-like (yeast)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|A5D785 CSE1L "Exportin-2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query486
pfam03378435 pfam03378, CAS_CSE1, CAS/CSE protein, C-terminus 1e-132
COG5657947 COG5657, CSE1, CAS/CSE protein involved in chromos 2e-25
pfam08506370 pfam08506, Cse1, Cse1 6e-17
pfam03378435 pfam03378, CAS_CSE1, CAS/CSE protein, C-terminus 3e-04
>gnl|CDD|217521 pfam03378, CAS_CSE1, CAS/CSE protein, C-terminus Back     alignment and domain information 
 Score =  390 bits (1004), Expect = e-132
 Identities = 175/402 (43%), Positives = 232/402 (57%), Gaps = 36/402 (8%)

Query: 117 DRVLVMRSPNGQGTLVTADVLAPLAADLYKNLLVIFTRPGSEENEYAMKCIMRSMSTLQD 176
           +R+L +R   GQ  + T   +AP A DL  +L     +PGS+ENEY MKCIMR +  +Q+
Sbjct: 1   ERLLTLRDEQGQ-PIFTPADIAPFAKDLLTHLFAALEKPGSQENEYLMKCIMRVLIVIQE 59

Query: 177 KVVPYLSDLLFQLTQRLAAAAKNPSKPNYNHFLFEAITLAIRIVCKQNPEAVATFEQALF 236
            V+PY   +L  LT  L   +KNPS P +NH+LFEAI   IR  CK +P AV+ FE+ALF
Sbjct: 60  GVLPYADTVLQHLTNILLVVSKNPSNPRFNHYLFEAIGALIRFACKADPAAVSKFEEALF 119

Query: 237 PIFQVIIQQDTLEFLPYTFQILSLLLEFRPRGSISAPYLELYPFLLSPVLWSRPGNIHPL 296
           P FQ I+Q+D  EF+PY FQ+L+ LLE  P G++   Y+ L+P LLSP LW R GN+  L
Sbjct: 120 PPFQAILQEDVTEFMPYVFQLLAQLLEANPSGTLPDYYMALFPPLLSPALWERRGNVPAL 179

Query: 297 VRLLRAFITKSEPSQFSATLKLNNVLGVFQKLIASK------------------------ 332
           VRLL AFI K+   +  A  KL  +LG+FQKLIASK                        
Sbjct: 180 VRLLSAFIPKA-SQEIVAENKLEPILGIFQKLIASKANDHQGFYLLESVIEYFPPEVLEP 238

Query: 333 ----IFVLLFQRLSSSKTAKYSKGLVTFLMFYVINMGATSLIQLIDSIQGSLFSMVAEKL 388
               IF LLFQRL +SKT K+ K  V F   Y    GA  LIQLID+IQ  +F M+   +
Sbjct: 239 YFKTIFSLLFQRLQNSKTEKFKKRFVVFYHLYSAKYGADFLIQLIDAIQPGVFGMIYLNI 298

Query: 389 ILADLQKVSGAVNRKIAAFGLAKLLTEAKEVTEGPYVQ--APLTGALLNLIQLPEDDSTQ 446
           IL + QKV+G ++RK+AA    KLL E+    +  Y +    L  ALL L++LP D +T 
Sbjct: 299 ILPETQKVAGPLDRKLAAVSYTKLLCESPAFAD-RYPKGWGFLLQALLKLLELPPDPATP 357

Query: 447 PEDHFVDIE--NILEYDAAYSKLTFAADKEEYDPLSDIIQVK 486
            ED F+D    + + Y   +++L  A  KE  DP  +I  VK
Sbjct: 358 DEDEFIDEADVDDMGYGVGFTQLNTAGKKER-DPFPEIPDVK 398

Mammalian cellular apoptosis susceptibility (CAS) proteins are homologous to the yeast chromosome-segregation protein, CSE1. This family aligns the C-terminal halves (approximately). CAS is involved in both cellular apoptosis and proliferation. Apoptosis is inhibited in CAS-depleted cells, while the expression of CAS correlates to the degree of cellular proliferation. Like CSE1, it is essential for the mitotic checkpoint in the cell cycle (CAS depletion blocks the cell in the G2 phase), and has been shown to be associated with the microtubule network and the mitotic spindle, as is the protein MEK, which is thought to regulate the intracellular localisation (predominantly nuclear vs. predominantly cytosolic) of CAS. In the nucleus, CAS acts as a nuclear transport factor in the importin pathway. The importin pathway mediates the nuclear transport of several proteins that are necessary for mitosis and further progression. CAS is therefore thought to affect the cell cycle through its effect on the nuclear transport of these proteins. Since apoptosis also requires the nuclear import of several proteins (such as P53 and transcription factors), it has been suggested that CAS also enables apoptosis by facilitating the nuclear import of at least a subset of these essential proteins. Length = 435
>gnl|CDD|227944 COG5657, CSE1, CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|219873 pfam08506, Cse1, Cse1 Back     alignment and domain information
>gnl|CDD|217521 pfam03378, CAS_CSE1, CAS/CSE protein, C-terminus Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 486
KOG1992|consensus960 100.0
PF03378435 CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: I 100.0
KOG1991|consensus1010 100.0
COG5657947 CSE1 CAS/CSE protein involved in chromosome segreg 100.0
COG5656970 SXM1 Importin, protein involved in nuclear import 99.93
PF08506370 Cse1: Cse1; InterPro: IPR013713 The exchange of ma 99.92
KOG1993|consensus978 99.13
KOG2274|consensus1005 98.54
KOG2171|consensus 1075 97.45
KOG2171|consensus 1075 95.92
PF01602526 Adaptin_N: Adaptin N terminal region; InterPro: IP 95.89
KOG1241|consensus859 95.72
KOG1824|consensus 1233 95.33
COG5215858 KAP95 Karyopherin (importin) beta [Intracellular t 94.8
KOG2023|consensus885 94.58
KOG1240|consensus 1431 94.15
PF03378435 CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: I 93.88
KOG0213|consensus1172 93.78
KOG1992|consensus960 93.34
PTZ00429 746 beta-adaptin; Provisional 92.81
PF01602526 Adaptin_N: Adaptin N terminal region; InterPro: IP 92.58
PF10274183 ParcG: Parkin co-regulated protein; InterPro: IPR0 90.67
PF14500262 MMS19_N: Dos2-interacting transcription regulator 89.66
PF08167165 RIX1: rRNA processing/ribosome biogenesis 89.14
PF10508503 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; 88.71
KOG2022|consensus982 88.7
KOG1242|consensus569 88.43
COG5096 757 Vesicle coat complex, various subunits [Intracellu 88.36
KOG1062|consensus 866 87.0
KOG2023|consensus885 86.22
COG5181975 HSH155 U2 snRNP spliceosome subunit [RNA processin 84.84
PF0298531 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re 83.49
PF10521282 DUF2454: Protein of unknown function (DUF2454); In 82.15
KOG1058|consensus 948 81.29
PF1275597 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region 80.98
smart00802107 UME Domain in UVSB PI-3 kinase, MEI-41 and ESR-1. 80.97
PF12719298 Cnd3: Nuclear condensing complex subunits, C-term 80.72
KOG2274|consensus1005 80.61
>KOG1992|consensus Back     alignment and domain information 
Probab=100.00  E-value=1.7e-118  Score=957.32  Aligned_cols=477  Identities=43%  Similarity=0.708  Sum_probs=461.2

Q ss_pred             ChhhHHHHHHHHHhh-------------hhhhHHHHHHHHHhhcccccccccccccccccHHHHHHHhhccccCCCCCCC
Q psy9800           1 MEDKMMGTFGAYVEI-------------KYKDTAIYLVTSLASQGSTVKHGTTKSSTLVNLEDFAQQHIFPELNKPDELC   67 (486)
Q Consensus         1 fe~~vt~i~~~yi~~-------------r~KD~Ai~Lv~sla~~~~t~~~Gvt~~n~lv~v~~ff~~~V~PeL~~~~~~~   67 (486)
                      ||++||+|++.|++.             |.||.||||++|+|+||.|+++|||+||++||+.+||.++|+|||.+|++  
T Consensus       393 fe~~vt~v~~~~v~~~l~~y~~nPS~nWk~kd~aiyL~talaik~~t~~~Gvtstn~lvdv~~Ff~~~ilp~L~s~~v--  470 (960)
T KOG1992|consen  393 FEGQVTGVFSSEVQRLLDQYSKNPSGNWKKKDRAIYLVTALAIKGQTAKHGVTSTNELVDVVDFFANQILPDLLSPNV--  470 (960)
T ss_pred             hcchhHHHHHHHHHHHHHHhccCCCccccccchhhhhhHHHHhhcchhhcceeeccccccHHHHHHHHhhHHhccCcc--
Confidence            799999999999998             89999999999999999999999999999999999999999999999987  


Q ss_pred             CCccccchhhh---hhHhhccCCcchhhH---HHHHHhhccCCCCcHHHHHHHHHHHHHcccCCCCCCcccccchhhhhH
Q psy9800          68 PNELLSPHLKQ---IFVLLFQRLSSSKTA---KYSKVSHLESAHPVVHSYASHAIDRVLVMRSPNGQGTLVTADVLAPLA  141 (486)
Q Consensus        68 ~~~~~~piLka---Ky~~~FRn~l~~~~l---lp~l~~~L~~~~~vV~tyAA~aIerlL~~k~~~~~~~~~~~~~l~p~~  141 (486)
                       +++  |+|||   ||+++||||++++++   +|.++++|.+++.|||+|||+||||+|.+++++ +..+|+++++.|+.
T Consensus       471 -n~~--pilka~aIKy~~~FR~ql~~~~lm~~~p~li~~L~a~s~vvhsYAA~aiEkil~vre~~-~~~if~~~~iap~~  546 (960)
T KOG1992|consen  471 -NEF--PILKADAIKYIYTFRNQLGKEHLMALLPRLIRFLEAESRVVHSYAAIAIEKLLTVRENS-NAKIFGAEDIAPFV  546 (960)
T ss_pred             -ccc--cchhhcccceeeeecccCChHHHHHHHHHHHHhccCcchHHHHHHHHHHHhccccccCc-cccccchhhcchHH
Confidence             887  99999   999999999999999   999999999999999999999999999999976 77899999999999


Q ss_pred             HHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHhhhhhhchHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHH
Q psy9800         142 ADLYKNLLVIFTRPGSEENEYAMKCIMRSMSTLQDKVVPYLSDLLFQLTQRLAAAAKNPSKPNYNHFLFEAITLAIRIVC  221 (486)
Q Consensus       142 ~~lL~~Lf~li~~~~~~eNeylmk~imRii~~~~e~i~p~~~~l~~~L~~il~~v~kNpsnp~f~hylFEsi~~lir~~~  221 (486)
                      ..+++|||+.+..|++.||||+||||||++.+.++++.|+++.++.+|++++.+++|||+||+||||+||++|+++|++|
T Consensus       547 ~~ll~nLf~a~s~p~~~EneylmKaImRii~i~~~~i~p~~~~~l~~Lteiv~~v~KNPs~P~fnHYLFEsi~~li~~t~  626 (960)
T KOG1992|consen  547 EILLTNLFKALSLPGKAENEYLMKAIMRIISILQSAIIPHAPELLRQLTEIVEEVSKNPSNPQFNHYLFESIGLLIRKTC  626 (960)
T ss_pred             HHHHHHHHHhccCCcccccHHHHHHHHHHHHhCHHhhhhhhhHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCchHHHHHHHHhhHHHHHHhccccchhhhhHHHHHHHHHhhCCCCCCChhHHHhhhhhcCccccCCCCCccchhHHHH
Q psy9800         222 KQNPEAVATFEQALFPIFQVIIQQDTLEFLPYTFQILSLLLEFRPRGSISAPYLELYPFLLSPVLWSRPGNIHPLVRLLR  301 (486)
Q Consensus       222 ~~~p~~~~~~E~~L~P~~~~IL~~dv~EF~pYvfQIls~lle~~~~~~is~~y~~L~~~Ll~p~lWe~~gnip~lvrlL~  301 (486)
                      +.+|+++++||.+|||+|+.||++|++||+|||||++|+++|.+.+ ++|+.||++||+|++|.+|+++||+||++|||+
T Consensus       627 ~~~~~~vs~~e~aL~p~fq~Il~eDI~EfiPYvfQlla~lve~~~~-~ip~~~~~l~~~lLsp~lW~r~gNipalvrLl~  705 (960)
T KOG1992|consen  627 KANPSAVSSLEEALFPVFQTILSEDIQEFIPYVFQLLAVLVEHSSG-TIPDSYSPLFPPLLSPNLWKRSGNIPALVRLLQ  705 (960)
T ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCchhHHHHHHHhcCHHHHhhcCCcHHHHHHHH
Confidence            9999999999999999999999999999999999999999999886 899999999999999999999999999999999


Q ss_pred             HhhcccCccccccccchhHHHHHHHHHHHHH----------------------------HHHHHHHHhhcCCcchhHHHH
Q psy9800         302 AFITKSEPSQFSATLKLNNVLGVFQKLIASK----------------------------IFVLLFQRLSSSKTAKYSKGL  353 (486)
Q Consensus       302 ayi~k~~~~~~~~~~~l~~ilgifqkli~sk----------------------------I~~lll~RLq~~kt~k~~k~~  353 (486)
                      ||+++ |++.+.+.+++.+|||+||||++||                            ||.++|+|+|+|||+||+|+|
T Consensus       706 aflk~-g~~~~~~~~~l~~iLGifqkLiaSka~Dh~GF~LLn~i~~~~~~~~~~py~k~i~~llf~RlqnskT~kf~k~~  784 (960)
T KOG1992|consen  706 AFLKT-GSQIVEAADKLSGILGIFQKLIASKANDHHGFYLLNTIIESIPPNELAPYMKQIFGLLFQRLQNSKTEKFVKSF  784 (960)
T ss_pred             HHHhc-CchhhcccccchhHHHHHHHHhcCcccchhHHHHHHHHHhcCCHhhhhHHHHHHHHHHHHHHhccCcHHHHHHH
Confidence            99999 9999998888999999999999999                            899999999999999999999


Q ss_pred             HHHHHHHHHhhChHHHHHHHHhhhcchhHHHHHHHhhcccccccCcchhhhHHHHHHHHhhhhccccCCCCCc--hhHHH
Q psy9800         354 VTFLMFYVINMGATSLIQLIDSIQGSLFSMVAEKLILADLQKVSGAVNRKIAAFGLAKLLTEAKEVTEGPYVQ--APLTG  431 (486)
Q Consensus       354 v~f~~~~~~~yg~~~li~~ld~iQ~glf~~i~~~~~lp~~~~~~~~~dRKi~~vgl~~lL~~~~~~~~~~~~~--~~ll~  431 (486)
                      ++|+|++++++|...+++.+|+||+|+|+|+++++|+|+++++.+..|||++++|.++++++++.++++.|.+  ++++.
T Consensus       785 ~vF~~~~~ik~~~~~l~e~~d~IQ~~~fg~l~e~~ii~~l~~i~~~~~rk~~avg~~~l~~e~~~~~d~~y~~l~~~ll~  864 (960)
T KOG1992|consen  785 IVFFSLFTIKKGGLMLAEVIDGIQPGMFGMLLENFIIPELPKIILRVDRKIMAVGATGLLTETPELLDQKYAKLWGPLLF  864 (960)
T ss_pred             HHHHHHHHHHhhhHHHHHHHhhcchhHHHHHHHHhccccchhhhhhhhHHHHHHHHhhhhhhcHHhhhHHHHhhhhhHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999998656776  99999


Q ss_pred             HHHHHhcCCCCCCCCCCC-cccchhhhcCCccccccccccccCCCCCCCCCCCCCC
Q psy9800         432 ALLNLIQLPEDDSTQPED-HFVDIENILEYDAAYSKLTFAADKEEYDPLSDIIQVK  486 (486)
Q Consensus       432 ~l~~ll~~p~~~~~~~~~-~~~~~~~~~~y~~~f~~L~~~~~~~~~Dp~~~i~~~~  486 (486)
                      .++.++|.|++....+|+ +..+.+++.||+++|+||++|+ +++.||+|+|.|+|
T Consensus       865 sii~lfe~p~~~~~~~e~~e~~~i~e~~~f~~~F~~L~~a~-~k~~Dpl~~i~~~k  919 (960)
T KOG1992|consen  865 SIIVLFELPSERTVLDEEEEMAEIEEDPGFQAAFSRLAYAG-KKPHDPLAQIKDPK  919 (960)
T ss_pred             HHHHHHhCChhhhccCchhhhhhhhcccchhHHHHHHHcCC-CCCCCchhhhhhHH
Confidence            999999999997776655 4567778889999999999999 99999999998864

>PF03378 CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: IPR005043 Mammalian cellular apoptosis susceptibility (CAS) proteins and the yeast chromosome-segregation protein, CSE1 are homologous [] Back     alignment and domain information
>KOG1991|consensus Back     alignment and domain information
>COG5657 CSE1 CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning] Back     alignment and domain information
>COG5656 SXM1 Importin, protein involved in nuclear import [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF08506 Cse1: Cse1; InterPro: IPR013713 The exchange of macromolecules between the nucleus and cytoplasm takes place through nuclear pore complexes within the nuclear membrane Back     alignment and domain information
>KOG1993|consensus Back     alignment and domain information
>KOG2274|consensus Back     alignment and domain information
>KOG2171|consensus Back     alignment and domain information
>KOG2171|consensus Back     alignment and domain information
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment Back     alignment and domain information
>KOG1241|consensus Back     alignment and domain information
>KOG1824|consensus Back     alignment and domain information
>COG5215 KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG2023|consensus Back     alignment and domain information
>KOG1240|consensus Back     alignment and domain information
>PF03378 CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: IPR005043 Mammalian cellular apoptosis susceptibility (CAS) proteins and the yeast chromosome-segregation protein, CSE1 are homologous [] Back     alignment and domain information
>KOG0213|consensus Back     alignment and domain information
>KOG1992|consensus Back     alignment and domain information
>PTZ00429 beta-adaptin; Provisional Back     alignment and domain information
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment Back     alignment and domain information
>PF10274 ParcG: Parkin co-regulated protein; InterPro: IPR019399 This family of proteins is transcribed anti-sense along the DNA to the Parkin gene product and the two appear to be transcribed under the same promoter Back     alignment and domain information
>PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II Back     alignment and domain information
>PF08167 RIX1: rRNA processing/ribosome biogenesis Back     alignment and domain information
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells Back     alignment and domain information
>KOG2022|consensus Back     alignment and domain information
>KOG1242|consensus Back     alignment and domain information
>COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG1062|consensus Back     alignment and domain information
>KOG2023|consensus Back     alignment and domain information
>COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification] Back     alignment and domain information
>PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 [] Back     alignment and domain information
>PF10521 DUF2454: Protein of unknown function (DUF2454); InterPro: IPR018870 Putative protein of unknown function; subunit of the ASTRA complex which is part of the chromatin remodeling machinery; similar to Schizosaccharomyces pombe (Fission yeast) Tti2p; may interact with Rsm23p [] Back     alignment and domain information
>KOG1058|consensus Back     alignment and domain information
>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region Back     alignment and domain information
>smart00802 UME Domain in UVSB PI-3 kinase, MEI-41 and ESR-1 Back     alignment and domain information
>PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain Back     alignment and domain information
>KOG2274|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query486
1wa5_C960 Crystal Structure Of The Exportin Cse1p Complexed W 1e-47
1z3h_A968 The Exportin Cse1 In Its Cargo-free, Cytoplasmic St 1e-47
>pdb|1WA5|C Chain C, Crystal Structure Of The Exportin Cse1p Complexed With Its Cargo (Kap60p) And Rangtp Length = 960 Back     alignment and structure 
Iteration: 1

 Score =  187 bits (476), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 148/513 (28%), Positives = 248/513 (48%), Gaps = 66/513 (12%)
Query: 16  KYKDTAIYLVTSLASQGSTVKHGTTKSSTLVNLEDFAQQHIFPELNKPDELCPNELLSPH 75
           K+KD  IYL T+LA  G+    G + ++ L+N+ DF  + I P+L   +   P+ +L   
Sbjct: 420 KFKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFFTKEIAPDLTSNN--IPHIILRVD 477
Query: 76  LKQIFVLLFQRLSSSKTAKYSKV--SHLESAHPVVHSYASHAIDRVLVMRSPNGQGTLV- 132
             +       +L+ ++  +   +  + L++   VV++YA+  I+++L +R  N     + 
Sbjct: 478 AIKYIYTFRNQLTKAQLIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIF 537
Query: 133 TADVLAPLAADLYKNLLVIFTRPGSE-----ENEYAMKCIMRSMSTLQDKVVPYLSDLLF 187
             + ++     L KNL+ +  + GS      ENE+ M+ I R + T +D + P    LL 
Sbjct: 538 HKEDISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQPLFPQLLA 597
Query: 188 QLTQRLAAAAKNPSKPNYNHFLFEAITLAIRIVCKQNPEAVATFEQALFPIFQVIIQQDT 247
           Q  + +   AKNPS P + H+ FE+I   +    +QN   +     ++ P F  +  +D 
Sbjct: 598 QFIEIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQN---LPLLVDSMMPTFLTVFSEDI 654
Query: 248 LEFLPYTFQILSLLLEFRPRGSISAPYLELYPFLLSPVLWSRPGNIHPLVRLLRAFITKS 307
            EF+PY FQI++ ++E     +I      L   LL+P +W   GNI  + RLL++FI K+
Sbjct: 655 QEFIPYVFQIIAFVVE--QSATIPESIKPLAQPLLAPNVWELKGNIPAVTRLLKSFI-KT 711
Query: 308 EPSQFSATLKLNNVLGVFQKLIASK----------------------------IFVLLFQ 339
           + S F     L  VLG+FQ+LIASK                            I VLL Q
Sbjct: 712 DSSIFP---DLVPVLGIFQRLIASKAYEVHGFDLLEHIMLLIDMNRLRPYIKQIAVLLLQ 768
Query: 340 RLSSSKTAKYSKGLVTFLMFYVINMGATSLIQLIDSIQGSLFSMVAEKLILADLQKVSGA 399
           RL +SKT +Y K L  F       +G+  LI  ID +Q  LF  +    I+  L  +   
Sbjct: 769 RLQNSKTERYVKKLTVFFGLISNKLGSDFLIHFIDEVQDGLFQQIWGNFIITTLPTIGNL 828
Query: 400 VNRKIAAFGLAKLLTEAKEVTEGPYVQAP---LTGALLNLIQLPEDDSTQP----EDHFV 452
           ++RKIA  G+  +      V  G + Q+    L  + +N   + E  S+Q     ++ +V
Sbjct: 829 LDRKIALIGVLNM------VINGQFFQSKYPTLISSTMN--SIIETASSQSIANLKNDYV 880
Query: 453 DIENILE---YDAAYSKLTFAADKEEYDPLSDI 482
           D++N+ E   + + +SKL   ++K  +DPL +I
Sbjct: 881 DLDNLEEISTFGSHFSKLVSISEK-PFDPLPEI 912
>pdb|1Z3H|A Chain A, The Exportin Cse1 In Its Cargo-free, Cytoplasmic State Length = 968 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query486
1wa5_C960 Importin alpha RE-exporter; nuclear transport/comp 6e-77
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
2bpt_A861 Importin beta-1 subunit; nuclear transport, nucleo 2e-04
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A Length = 960 Back     alignment and structure
 Score =  258 bits (659), Expect = 6e-77
 Identities = 133/511 (26%), Positives = 225/511 (44%), Gaps = 58/511 (11%)

Query: 14  EIKYKDTAIYLVTSLASQGSTVKHGTTKSSTLVNLEDFAQQHIFPELNKPDELCPNELLS 73
             K+KD  IYL T+LA  G+    G + ++ L+N+ DF  + I P+L   +      +  
Sbjct: 418 NWKFKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFFTKEIAPDLTSNN------IPH 471

Query: 74  PHLKQIFVLLFQRLSSSKTAKYSK------VSHLESAHPVVHSYASHAIDRVLVMRSPNG 127
             L+   +       +  T            + L++   VV++YA+  I+++L +R  N 
Sbjct: 472 IILRVDAIKYIYTFRNQLTKAQLIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNT 531

Query: 128 QGTLV-TADVLAPLAADLYKNLLVIFTRPGSE-----ENEYAMKCIMRSMSTLQDKVVPY 181
               +   + ++     L KNL+ +  + GS      ENE+ M+ I R + T +D + P 
Sbjct: 532 SPAFIFHKEDISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQPL 591

Query: 182 LSDLLFQLTQRLAAAAKNPSKPNYNHFLFEAITLAIRIVCKQNPEAVATFEQALFPIFQV 241
              LL Q  + +   AKNPS P + H+ FE+I   +        + +     ++ P F  
Sbjct: 592 FPQLLAQFIEIVTIMAKNPSNPRFTHYTFESIGAILNYTQ---RQNLPLLVDSMMPTFLT 648

Query: 242 IIQQDTLEFLPYTFQILSLLLEFRPRGSISAPYLELYPFLLSPVLWSRPGNIHPLVRLLR 301
           +  +D  EF+PY FQI++ ++E     +I      L   LL+P +W   GNI  + RLL+
Sbjct: 649 VFSEDIQEFIPYVFQIIAFVVEQSA--TIPESIKPLAQPLLAPNVWELKGNIPAVTRLLK 706

Query: 302 AFITKSEPSQFSATLKLNNVLGVFQKLIASK----------------------------I 333
           +FI                VLG+FQ+LIASK                            I
Sbjct: 707 SFIKTDSSIFPDL----VPVLGIFQRLIASKAYEVHGFDLLEHIMLLIDMNRLRPYIKQI 762

Query: 334 FVLLFQRLSSSKTAKYSKGLVTFLMFYVINMGATSLIQLIDSIQGSLFSMVAEKLILADL 393
            VLL QRL +SKT +Y K L  F       +G+  LI  ID +Q  LF  +    I+  L
Sbjct: 763 AVLLLQRLQNSKTERYVKKLTVFFGLISNKLGSDFLIHFIDEVQDGLFQQIWGNFIITTL 822

Query: 394 QKVSGAVNRKIAAFGLAKLLTEAKEVTEG-PYVQAPLTGALLNLIQLPEDDSTQPEDHFV 452
             +   ++RKIA  G+  ++   +      P + +    +++         + + +   +
Sbjct: 823 PTIGNLLDRKIALIGVLNMVINGQFFQSKYPTLISSTMNSIIETASSQSIANLKNDYVDL 882

Query: 453 D-IENILEYDAAYSKLTFAADKEEYDPLSDI 482
           D +E I  + + +SKL   ++K   DPL +I
Sbjct: 883 DNLEEISTFGSHFSKLVSISEKPF-DPLPEI 912
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A Length = 861 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query486
1wa5_C960 Importin alpha RE-exporter; nuclear transport/comp 100.0
3m1i_C1049 Exportin-1; heat repeat, GTP-binding, nucleotide-b 99.49
2x19_B963 Importin-13; nuclear transport, protein transport; 99.46
2x1g_F971 Cadmus; transport protein, developmental protein, 99.35
4fdd_A852 Transportin-1; heat repeats, karyopherin, nuclear 98.87
2bpt_A861 Importin beta-1 subunit; nuclear transport, nucleo 98.37
1qgr_A876 Protein (importin beta subunit); transport recepto 98.34
1qgr_A876 Protein (importin beta subunit); transport recepto 97.79
4fdd_A852 Transportin-1; heat repeats, karyopherin, nuclear 97.52
3ibv_A980 Exportin-T; karyopherin, heat repeat, cytoplasm, n 97.42
2bpt_A861 Importin beta-1 subunit; nuclear transport, nucleo 97.1
3ibv_A980 Exportin-T; karyopherin, heat repeat, cytoplasm, n 96.59
2qk1_A249 Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, h 96.31
1wa5_C 960 Importin alpha RE-exporter; nuclear transport/comp 96.31
2vgl_B591 AP-2 complex subunit beta-1; cytoplasmic vesicle, 96.11
1u6g_C 1230 TIP120 protein, CAND1; cullin repeat, heat repeat, 95.82
1w63_A618 Adapter-related protein complex 1 gamma 1 subunit; 95.3
2x1g_F971 Cadmus; transport protein, developmental protein, 95.21
2x19_B963 Importin-13; nuclear transport, protein transport; 95.18
4hat_C1023 Exportin-1; heat repeat, nuclear export, RAN-ranbp 95.02
4b8j_A528 Importin subunit alpha-1A; transport protein, nucl 94.65
1u6g_C 1230 TIP120 protein, CAND1; cullin repeat, heat repeat, 94.57
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 94.47
2vgl_A621 Adaptor protein complex AP-2, alpha 2 subunit; cyt 94.15
2qk1_A249 Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, h 93.75
2qk2_A242 LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2 93.52
1ibr_B462 P95, importin beta-1 subunit, nuclear factor; smal 93.29
2qk2_A242 LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2 92.63
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 92.02
4hat_C 1023 Exportin-1; heat repeat, nuclear export, RAN-ranbp 91.97
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 91.52
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 91.18
1ibr_B462 P95, importin beta-1 subunit, nuclear factor; smal 91.05
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 91.02
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 90.16
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 89.91
4b8j_A528 Importin subunit alpha-1A; transport protein, nucl 89.8
3tpo_A529 Importin subunit alpha-2; nuclear import, protein 89.77
1b3u_A588 Protein (protein phosphatase PP2A); scaffold prote 88.85
3ul1_B510 Importin subunit alpha-2; arm repeat, armadillo re 88.54
3tpo_A529 Importin subunit alpha-2; nuclear import, protein 88.51
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 88.44
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 88.22
1wa5_B530 Importin alpha subunit; nuclear transport/complex, 87.95
1wa5_B530 Importin alpha subunit; nuclear transport/complex, 87.44
1b3u_A 588 Protein (protein phosphatase PP2A); scaffold prote 87.22
3ul1_B510 Importin subunit alpha-2; arm repeat, armadillo re 84.56
3gjx_A 1073 Exportin-1; transport, cytoplasm, nucleus, RNA-bin 83.59
2z6g_A 780 B-catenin; FULL-length, beta-catenin, cell adhesio 83.56
2vgl_A621 Adaptor protein complex AP-2, alpha 2 subunit; cyt 82.76
1jdh_A 529 Beta-catenin; beta-catenin, protein-protein comple 82.25
3gjx_A 1073 Exportin-1; transport, cytoplasm, nucleus, RNA-bin 81.81
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A Back     alignment and structure
Probab=100.00  E-value=6.2e-61  Score=548.85  Aligned_cols=463  Identities=30%  Similarity=0.513  Sum_probs=409.3

Q ss_pred             hhhHHHHHHHHHhh-------------hhhhHHHHHHHHHhhcccccccccccccccccHHHHHHHhhccccCCCCCCCC
Q psy9800           2 EDKMMGTFGAYVEI-------------KYKDTAIYLVTSLASQGSTVKHGTTKSSTLVNLEDFAQQHIFPELNKPDELCP   68 (486)
Q Consensus         2 e~~vt~i~~~yi~~-------------r~KD~Ai~Lv~sla~~~~t~~~Gvt~~n~lv~v~~ff~~~V~PeL~~~~~~~~   68 (486)
                      ++.++..+..|+++             |.||+|+|+++++|.+|.+.+.|++++++++++++|+.++|+|+|++++    
T Consensus       393 ~~~v~~~~l~~i~~~l~~~~~~~~~~w~~reaal~algaia~~~~~~~~~~~~~~~~~~l~~~l~~~v~p~l~~~~----  468 (960)
T 1wa5_C          393 EVLVTNIFLAHMKGFVDQYMSDPSKNWKFKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFFTKEIAPDLTSNN----  468 (960)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHBSSCCBTTBCCCBCTTCCHHHHHHHHTHHHHHCSS----
T ss_pred             chhHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHhccccCCcccccccccHHHHHHHHhHHHhcCCC----
Confidence            44566555555532             8999999999999998865566888889999999999999999998763    


Q ss_pred             Cccccchhhh---hhHhhccCCcchhhH---HHHHHhhccCCCCcHHHHHHHHHHHHHcccCCC-CCCcccccchhhhhH
Q psy9800          69 NELLSPHLKQ---IFVLLFQRLSSSKTA---KYSKVSHLESAHPVVHSYASHAIDRVLVMRSPN-GQGTLVTADVLAPLA  141 (486)
Q Consensus        69 ~~~~~piLka---Ky~~~FRn~l~~~~l---lp~l~~~L~~~~~vV~tyAA~aIerlL~~k~~~-~~~~~~~~~~l~p~~  141 (486)
                      +.+  |++|+   +++-.|++.++++.+   +|.++++|.+++.+|+++||.|+++++..++++ +|++.+.++.+.|++
T Consensus       469 ~~~--p~vr~~a~~~lg~~~~~~~~~~l~~~l~~l~~~L~d~~~~V~~~A~~Al~~~~~~~~~~~~~~~~~~~~~l~p~l  546 (960)
T 1wa5_C          469 IPH--IILRVDAIKYIYTFRNQLTKAQLIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIFHKEDISNST  546 (960)
T ss_dssp             CSC--HHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBSCSSSCCBSSCGGGTTTTH
T ss_pred             CCC--ceehHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHhcccccccccccccHHHhhhhH
Confidence            223  99998   889999999887766   999999999999999999999999999876521 156677889999999


Q ss_pred             HHHHHHHHHhhCCCC-----CCccHHHHHHHHHHHHHhhhhhhchHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHH
Q psy9800         142 ADLYKNLLVIFTRPG-----SEENEYAMKCIMRSMSTLQDKVVPYLSDLLFQLTQRLAAAAKNPSKPNYNHFLFEAITLA  216 (486)
Q Consensus       142 ~~lL~~Lf~li~~~~-----~~eNeylmk~imRii~~~~e~i~p~~~~l~~~L~~il~~v~kNpsnp~f~hylFEsi~~l  216 (486)
                      ++++++|++++++.+     ..+||++|+|+++++..+++++.||+..++++|..++..+++||+||.|.|++||+++++
T Consensus       547 ~~ll~~L~~ll~~~~~~~~~~~~~e~l~~al~~vv~~~~~~~~p~~~~l~~~L~~~l~~~~~~~~~~~~~~~~~e~l~~l  626 (960)
T 1wa5_C          547 EILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQPLFPQLLAQFIEIVTIMAKNPSNPRFTHYTFESIGAI  626 (960)
T ss_dssp             HHHHHHHHHHHHTTCCCHHHHTSCHHHHHHHHHHHHHHTTTTGGGHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCCcccccHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHH
Confidence            999999999998742     349999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHHHhhHHHHHHhccccchhhhhHHHHHHHHHhhCCCCCCChhHHHhhhhhcCccccCCCCCccch
Q psy9800         217 IRIVCKQNPEAVATFEQALFPIFQVIIQQDTLEFLPYTFQILSLLLEFRPRGSISAPYLELYPFLLSPVLWSRPGNIHPL  296 (486)
Q Consensus       217 ir~~~~~~p~~~~~~E~~L~P~~~~IL~~dv~EF~pYvfQIls~lle~~~~~~is~~y~~L~~~Ll~p~lWe~~gnip~l  296 (486)
                      ++.   ..|+....+|+.++|++..+|++|+.||+||+||+++.+++...  ++++.||++|+++++|..|+++|++|++
T Consensus       627 ~~~---~~~~~~~~~~~~~~p~~~~iL~~~~~~~~~~~~~i~~~l~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~  701 (960)
T 1wa5_C          627 LNY---TQRQNLPLLVDSMMPTFLTVFSEDIQEFIPYVFQIIAFVVEQSA--TIPESIKPLAQPLLAPNVWELKGNIPAV  701 (960)
T ss_dssp             HHT---SCGGGHHHHHHHHHHHHHHHHHTTCTTTHHHHHHHHHHHHHHCS--SCCTTTGGGHHHHTSGGGGCCTTTHHHH
T ss_pred             Hhc---CCcchHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHHHHHhcc--CCCHHHHHHHHHHcCHHHhcCCCCchhH
Confidence            997   57788999999999999999999999999999999999999983  6999999999999999999999999999


Q ss_pred             hHHHHHhhcccCccccccccchhHHHHHHHHHHHHH----------------------------HHHHHHHHhhcCCcch
Q psy9800         297 VRLLRAFITKSEPSQFSATLKLNNVLGVFQKLIASK----------------------------IFVLLFQRLSSSKTAK  348 (486)
Q Consensus       297 vrlL~ayi~k~~~~~~~~~~~l~~ilgifqkli~sk----------------------------I~~lll~RLq~~kt~k  348 (486)
                      +|+|++|+.+ +++.+.+   ++.++++|++++++|                            ++.++++||+.+||++
T Consensus       702 ~~~L~~~~~~-~~~~~~~---~~~~l~~~~~~~~~~~~~~~a~~ll~~i~~~~~~~~~~~yl~~i~~~l~~~l~~~~~~~  777 (960)
T 1wa5_C          702 TRLLKSFIKT-DSSIFPD---LVPVLGIFQRLIASKAYEVHGFDLLEHIMLLIDMNRLRPYIKQIAVLLLQRLQNSKTER  777 (960)
T ss_dssp             HHHHHHHHHH-HGGGCSC---SHHHHHHHHHHHTCTTTHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHGGGSSCCHH
T ss_pred             HHHHHHHHHh-ChHHHHH---HHHHHHHHHHHhCCCcccchHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHhhCCcHh
Confidence            9999999999 9988875   889999999998775                            8999999999999999


Q ss_pred             hHHHHHHHHHHHHHhhChHHHHHHHHhhhcchhHHHHHHHhhcccccccCcchhhhHHHHHHHHhhhhccccCCCCCc--
Q psy9800         349 YSKGLVTFLMFYVINMGATSLIQLIDSIQGSLFSMVAEKLILADLQKVSGAVNRKIAAFGLAKLLTEAKEVTEGPYVQ--  426 (486)
Q Consensus       349 ~~k~~v~f~~~~~~~yg~~~li~~ld~iQ~glf~~i~~~~~lp~~~~~~~~~dRKi~~vgl~~lL~~~~~~~~~~~~~--  426 (486)
                      +.+++++|+|.++.+|||+.+++.+|++|+|.|.+++.+.|+|+++++.+.+|||+|++|++++++.+ .+.++.+..  
T Consensus       778 ~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~f~~~~~~~w~~~~~~~~~~~erk~~~~gl~~ll~~~-~~~~~~~~~~~  856 (960)
T 1wa5_C          778 YVKKLTVFFGLISNKLGSDFLIHFIDEVQDGLFQQIWGNFIITTLPTIGNLLDRKIALIGVLNMVING-QFFQSKYPTLI  856 (960)
T ss_dssp             HHHHHHHHHHHHHHHHCHHHHHHHHHTTSTTHHHHHHHHTHHHHGGGCCSHHHHHHHHHHHHHHHHSC-HHHHHHCGGGH
T ss_pred             HHHHHHHHHHHHHHHcCHHHHHHHHHhcchhHHHHHHHHHhccchhhccCHHHHHHHHHHHHHHHhcc-cccchhHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999987 222222332  


Q ss_pred             hhHHHHHHHHhcCCCCCCCCCC--CcccchhhhcCCccccccccccccCCCCCCCCCC
Q psy9800         427 APLTGALLNLIQLPEDDSTQPE--DHFVDIENILEYDAAYSKLTFAADKEEYDPLSDI  482 (486)
Q Consensus       427 ~~ll~~l~~ll~~p~~~~~~~~--~~~~~~~~~~~y~~~f~~L~~~~~~~~~Dp~~~i  482 (486)
                      +.++++++++++.|+++...+|  |++ |+||..||+++|++|++++ +++.||+++|
T Consensus       857 ~~~~~~i~~l~~~~~~~~~~~~~~e~~-d~~~~~~~~~~~~~L~~~~-~~~~dp~~~i  912 (960)
T 1wa5_C          857 SSTMNSIIETASSQSIANLKNDYVDLD-NLEEISTFGSHFSKLVSIS-EKPFDPLPEI  912 (960)
T ss_dssp             HHHHHHHHHHHHSCSTTCSCCSCC------CCCCCTTCCCCCCGGGC-CCCCCSCTTS
T ss_pred             HHHHHHHHHHHhCCcccccCCcccccc-ccccccccchHHHHHHhCC-CCCCCChhhh
Confidence            8999999999999887765332  222 3444558999999999999 8999999998
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B Back     alignment and structure
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B Back     alignment and structure
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster} Back     alignment and structure
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Back     alignment and structure
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A Back     alignment and structure
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A Back     alignment and structure
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A Back     alignment and structure
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Back     alignment and structure
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T* Back     alignment and structure
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A Back     alignment and structure
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T* Back     alignment and structure
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae} Back     alignment and structure
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A Back     alignment and structure
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B Back     alignment and structure
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Back     alignment and structure
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1 Back     alignment and structure
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster} Back     alignment and structure
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B Back     alignment and structure
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B Back     alignment and structure
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A Back     alignment and structure
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Back     alignment and structure
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A Back     alignment and structure
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae} Back     alignment and structure
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} Back     alignment and structure
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A Back     alignment and structure
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Back     alignment and structure
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Back     alignment and structure
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A Back     alignment and structure
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Back     alignment and structure
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A Back     alignment and structure
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B Back     alignment and structure
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Back     alignment and structure
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... Back     alignment and structure
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Back     alignment and structure
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Back     alignment and structure
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... Back     alignment and structure
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Back     alignment and structure
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Back     alignment and structure
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 486
d1wa5c_959 a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Sacc 4e-65
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 959 Back     information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Exportin Cse1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  224 bits (572), Expect = 4e-65
 Identities = 132/506 (26%), Positives = 224/506 (44%), Gaps = 46/506 (9%)

Query: 14  EIKYKDTAIYLVTSLASQGSTVKHGTTKSSTLVNLEDFAQQHIFPELNKPDELCPNELLS 73
             K+KD  IYL T+LA  G+    G + ++ L+N+ DF  + I P+L   +       + 
Sbjct: 418 NWKFKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFFTKEIAPDLTSNNIPHIILRVD 477

Query: 74  PHLKQIFVLLFQRLSSSKTAKYSKVSHLESAHPVVHSYASHAIDRVLVMRSPNGQGTLV- 132
                         +          + L++   VV++YA+  I+++L +R  N     + 
Sbjct: 478 AIKYIYTFRNQLTKAQLIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIF 537

Query: 133 TADVLAPLAADLYKNLLVIFTRPGSE-----ENEYAMKCIMRSMSTLQDKVVPYLSDLLF 187
             + ++     L KNL+ +  + GS      ENE+ M+ I R + T +D + P    LL 
Sbjct: 538 HKEDISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQPLFPQLLA 597

Query: 188 QLTQRLAAAAKNPSKPNYNHFLFEAITLAIRIVCKQNPEAVATFEQALFPIFQVIIQQDT 247
           Q  + +   AKNPS P + H+ FE+I   +        + +     ++ P F  +  +D 
Sbjct: 598 QFIEIVTIMAKNPSNPRFTHYTFESIGAILNYTQ---RQNLPLLVDSMMPTFLTVFSEDI 654

Query: 248 LEFLPYTFQILSLLLEFRPRGSISAPYLELYPFLLSPVLWSRPGNIHPLVRLLRAFITKS 307
            EF+PY FQI++ ++E     +I      L   LL+P +W   GNI  + RLL++FI   
Sbjct: 655 QEFIPYVFQIIAFVVEQSA--TIPESIKPLAQPLLAPNVWELKGNIPAVTRLLKSFIKTD 712

Query: 308 EPSQFSATLKLNNVLGVFQKLIASK----------------------------IFVLLFQ 339
                S    L  VLG+FQ+LIASK                            I VLL Q
Sbjct: 713 S----SIFPDLVPVLGIFQRLIASKAYEVHGFDLLEHIMLLIDMNRLRPYIKQIAVLLLQ 768

Query: 340 RLSSSKTAKYSKGLVTFLMFYVINMGATSLIQLIDSIQGSLFSMVAEKLILADLQKVSGA 399
           RL +SKT +Y K L  F       +G+  LI  ID +Q  LF  +    I+  L  +   
Sbjct: 769 RLQNSKTERYVKKLTVFFGLISNKLGSDFLIHFIDEVQDGLFQQIWGNFIITTLPTIGNL 828

Query: 400 VNRKIAAFGLAKLLTEAKEV-TEGPYVQAPLTGALLNLIQLPEDDSTQPEDHF-VDIENI 457
           ++RKIA  G+  ++   +   ++ P + +    +++         + + +     ++E I
Sbjct: 829 LDRKIALIGVLNMVINGQFFQSKYPTLISSTMNSIIETASSQSIANLKNDYVDLDNLEEI 888

Query: 458 LEYDAAYSKLTFAADKEEYDPLSDII 483
             + + +SKL   ++K   DPL +I 
Sbjct: 889 STFGSHFSKLVSISEKPF-DPLPEID 913

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query486
d1wa5c_959 Exportin Cse1p {Baker's yeast (Saccharomyces cerev 100.0
d1qbkb_888 Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 99.08
d2bpta1861 Importin beta {Baker's yeast (Saccharomyces cerevi 97.91
d1qgra_876 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 97.45
d1qbkb_888 Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 96.91
d2bpta1861 Importin beta {Baker's yeast (Saccharomyces cerevi 96.87
d1u6gc_ 1207 Cullin-associated NEDD8-dissociated protein 1 (Tip 96.15
d1wa5c_ 959 Exportin Cse1p {Baker's yeast (Saccharomyces cerev 95.66
d1u6gc_ 1207 Cullin-associated NEDD8-dissociated protein 1 (Tip 95.53
d2vglb_579 Adaptin beta subunit N-terminal fragment {Human (H 95.19
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 95.11
d1qgra_876 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 94.76
d1b3ua_588 Constant regulatory domain of protein phosphatase 94.58
d2vgla_584 Adaptin alpha C subunit N-terminal fragment {Mouse 93.69
d1xm9a1457 Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} 93.44
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 92.77
d1b3ua_588 Constant regulatory domain of protein phosphatase 91.91
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 90.61
d2vglb_ 579 Adaptin beta subunit N-terminal fragment {Human (H 89.27
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 89.05
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 88.35
d1jdha_ 529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 86.03
d1xm9a1457 Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} 84.16
d1ibrb_458 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 82.34
d1ibrb_458 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 80.46
d2vgla_584 Adaptin alpha C subunit N-terminal fragment {Mouse 80.17
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Exportin Cse1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.1e-49  Score=437.26  Aligned_cols=451  Identities=30%  Similarity=0.522  Sum_probs=399.1

Q ss_pred             hhhhHHHHHHHHHhhcccccccccccccccccHHHHHHHhhccccCCCCCCCCCccccchhhh---hhHhhccCCcchhh
Q psy9800          16 KYKDTAIYLVTSLASQGSTVKHGTTKSSTLVNLEDFAQQHIFPELNKPDELCPNELLSPHLKQ---IFVLLFQRLSSSKT   92 (486)
Q Consensus        16 r~KD~Ai~Lv~sla~~~~t~~~Gvt~~n~lv~v~~ff~~~V~PeL~~~~~~~~~~~~~piLka---Ky~~~FRn~l~~~~   92 (486)
                      +.||+|++++++++.++.....++++.+..+|+++|+.+++.|++.+.+    ...  +++|+   .++..|++.++.+.
T Consensus       420 ~~~e~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~l~~~~----~~~--~~lr~~~~~~i~~~~~~~~~~~  493 (959)
T d1wa5c_         420 KFKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFFTKEIAPDLTSNN----IPH--IILRVDAIKYIYTFRNQLTKAQ  493 (959)
T ss_dssp             HHHHHHHHHHHHHHBSSCCBTTBCCCBCTTCCHHHHHHHHTHHHHHCSS----CSC--HHHHHHHHHHHHHTGGGSCHHH
T ss_pred             HHHHHHHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHHHHHHccCC----Cch--HHHHHHHHHHHHHHHhhccHHH
Confidence            8899999999999999988888989888999999999999999998765    333  78888   88899999988766


Q ss_pred             H---HHHHHhhccCCCCcHHHHHHHHHHHHHcccCCC-CCCcccccchhhhhHHHHHHHHHHhhCCCCC-----CccHHH
Q psy9800          93 A---KYSKVSHLESAHPVVHSYASHAIDRVLVMRSPN-GQGTLVTADVLAPLAADLYKNLLVIFTRPGS-----EENEYA  163 (486)
Q Consensus        93 l---lp~l~~~L~~~~~vV~tyAA~aIerlL~~k~~~-~~~~~~~~~~l~p~~~~lL~~Lf~li~~~~~-----~eNeyl  163 (486)
                      +   ++.++++|.+++.+|+.+||.|+++++...... .....+..+.+.|+++++++.|+..+.+..+     .+++|+
T Consensus       494 ~~~~~~~l~~~L~~~~~~V~~~a~~al~~~~~~~~~~~~~~~~~~~~~l~p~l~~ll~~L~~~l~~~~~~~~~~~~~~~l  573 (959)
T d1wa5c_         494 LIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIFHKEDISNSTEILLKNLIALILKHGSSPEKLAENEFL  573 (959)
T ss_dssp             HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBSCSSSCCBSSCGGGTTTTHHHHHHHHHHHHHTTCCCHHHHTSCHHH
T ss_pred             HHHHHHHHHHHhCCCchhHHHHHHHHHHHHHHhhcccccchhhccHHHHHhhHHHHHHHHHHHHHhhcchhhhHHHHHHH
Confidence            5   999999999999999999999999999887643 1345788899999999999999999966433     478999


Q ss_pred             HHHHHHHHHHhhhhhhchHHHHHHHHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHhcCchHHHHHHHHhhHHHHHHh
Q psy9800         164 MKCIMRSMSTLQDKVVPYLSDLLFQLTQRLAAAAKNPSKPNYNHFLFEAITLAIRIVCKQNPEAVATFEQALFPIFQVII  243 (486)
Q Consensus       164 mk~imRii~~~~e~i~p~~~~l~~~L~~il~~v~kNpsnp~f~hylFEsi~~lir~~~~~~p~~~~~~E~~L~P~~~~IL  243 (486)
                      ++|+++++..+++.+.|++..+++.|..++...++||+||.+.|++||+++.+++.   .+|+....+++.++|++..++
T Consensus       574 l~~l~~ii~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~e~l~~l~~~---~~~~~~~~l~~~l~p~i~~~~  650 (959)
T d1wa5c_         574 MRSIFRVLQTSEDSIQPLFPQLLAQFIEIVTIMAKNPSNPRFTHYTFESIGAILNY---TQRQNLPLLVDSMMPTFLTVF  650 (959)
T ss_dssp             HHHHHHHHHHHTTTTGGGHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHT---SCGGGHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHh---cCchhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999987   467888999999999999999


Q ss_pred             ccccchhhhhHHHHHHHHHhhCCCCCCChhHHHhhhhhcCccccCCCCCccchhHHHHHhhcccCccccccccchhHHHH
Q psy9800         244 QQDTLEFLPYTFQILSLLLEFRPRGSISAPYLELYPFLLSPVLWSRPGNIHPLVRLLRAFITKSEPSQFSATLKLNNVLG  323 (486)
Q Consensus       244 ~~dv~EF~pYvfQIls~lle~~~~~~is~~y~~L~~~Ll~p~lWe~~gnip~lvrlL~ayi~k~~~~~~~~~~~l~~ilg  323 (486)
                      +++..+|.||++|+++.+++..+.  +++.||+++++++.+..|+..++++.+.+++++|+.+ +++.+.   +...+++
T Consensus       651 ~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~---~~~~~l~  724 (959)
T d1wa5c_         651 SEDIQEFIPYVFQIIAFVVEQSAT--IPESIKPLAQPLLAPNVWELKGNIPAVTRLLKSFIKT-DSSIFP---DLVPVLG  724 (959)
T ss_dssp             HTTCTTTHHHHHHHHHHHHHHCSS--CCTTTGGGHHHHTSGGGGCCTTTHHHHHHHHHHHHHH-HGGGCS---CSHHHHH
T ss_pred             hccchhHHHHHHHHHHHHHHhCCC--ccHHHHHHHHHHhhHHHHHHhhhHHHHHHHHHHHHHh-CHHhhc---chHHHHH
Confidence            999999999999999999999874  9999999999999999999999999999999999999 998885   3678999


Q ss_pred             HHHHHHHHH----------------------------HHHHHHHHhhcCCcchhHHHHHHHHHHHHHhhChHHHHHHHHh
Q psy9800         324 VFQKLIASK----------------------------IFVLLFQRLSSSKTAKYSKGLVTFLMFYVINMGATSLIQLIDS  375 (486)
Q Consensus       324 ifqkli~sk----------------------------I~~lll~RLq~~kt~k~~k~~v~f~~~~~~~yg~~~li~~ld~  375 (486)
                      +|+++++++                            |+..+++||++.++.++.+.++.++|..+.+|||+.+++.+++
T Consensus       725 ~~~~~l~~~~~~~~~~~ll~~ii~~~~~~~~~~~l~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  804 (959)
T d1wa5c_         725 IFQRLIASKAYEVHGFDLLEHIMLLIDMNRLRPYIKQIAVLLLQRLQNSKTERYVKKLTVFFGLISNKLGSDFLIHFIDE  804 (959)
T ss_dssp             HHHHHHTCTTTHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHGGGSSCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHT
T ss_pred             HHHHHHCCCcchHHHHHHHHHHHHHCchhhhHhHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            999998755                            8999999999999999999999999999999999999999999


Q ss_pred             hhcchhHHHHHHHhhcccccccCcchhhhHHHHHHHHhhhhccccCCCCCc--hhHHHHHHHHhcCCCCCCCCCC-Cccc
Q psy9800         376 IQGSLFSMVAEKLILADLQKVSGAVNRKIAAFGLAKLLTEAKEVTEGPYVQ--APLTGALLNLIQLPEDDSTQPE-DHFV  452 (486)
Q Consensus       376 iQ~glf~~i~~~~~lp~~~~~~~~~dRKi~~vgl~~lL~~~~~~~~~~~~~--~~ll~~l~~ll~~p~~~~~~~~-~~~~  452 (486)
                      +|++++.+++.+.|+++.+++.+.+|||++++|++++|+.++.+.+ .+..  ..++..+++..+..+.+....+ .+..
T Consensus       805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~l~~ll~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  883 (959)
T d1wa5c_         805 VQDGLFQQIWGNFIITTLPTIGNLLDRKIALIGVLNMVINGQFFQS-KYPTLISSTMNSIIETASSQSIANLKNDYVDLD  883 (959)
T ss_dssp             TSTTHHHHHHHHTHHHHGGGCCSHHHHHHHHHHHHHHHHSCHHHHH-HCGGGHHHHHHHHHHHHHSCSTTCSCCSCC---
T ss_pred             hchhhHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHhcCChhhhh-HHHHHHHHHHHHHHHHhhccccccccccchhcc
Confidence            9999999999999999999999999999999999999998776654 2443  7788888887766544433222 2223


Q ss_pred             chhhhcCCccccccccccccCCCCCCCCCCC
Q psy9800         453 DIENILEYDAAYSKLTFAADKEEYDPLSDII  483 (486)
Q Consensus       453 ~~~~~~~y~~~f~~L~~~~~~~~~Dp~~~i~  483 (486)
                      +++++.||+.+|++|.+++ .++.||++++.
T Consensus       884 ~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~  913 (959)
T d1wa5c_         884 NLEEISTFGSHFSKLVSIS-EKPFDPLPEID  913 (959)
T ss_dssp             --CCCCCTTCCCCCCGGGC-CCCCCSCTTSC
T ss_pred             ccccccccchhhhHHHHhh-hcccCCcccCC
Confidence            4456689999999999999 89999998754
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure