Psyllid ID: psy9841


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-----
MASAIYRAAISAVDRFVPSKARPLWEHPAGPKTVFFWAPMFKWGLVIAGIGDLTRPAEKLSISQSSALAATGLIWSRYSLVIIPKNWSLFSVNMFVALPCVKLELEDLGECLSNLLAGIENQPRN
cHHHHHHHHHHHHHHHccccccHHHHcccccccccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
cHHHHHHHHHHHHHHHcHHHHHHHHcccccccEEEEHHHHHHHHHHHHcHHHccccHHHccccHHHHHHHHHHHHHHHEEEEccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccc
MASAIYRAAISAvdrfvpskarplwehpagpktvffwapMFKWGLVIAGigdltrpaeklsisQSSALAATGLIWSRYSLviipknwslFSVNMFVALPCVKLELEDLGECLSNLLAgienqprn
MASAIYRAAisavdrfvpskarplwehpaGPKTVFFWAPMFKWGLVIAGIGDLTRPAEKLSISQSSALAATGLIWSRYSLVIIPKNWSLFSVNMFVALPCVKLELEDLGECLSNllagienqprn
MASAIYRAAISAVDRFVPSKARPLWEHPAGPKTVFFWAPMFKWGLVIAGIGDLTRPAEKLSISQSSALAATGLIWSRYSLVIIPKNWSLFSVNMFVALPCVKLELEDLGECLSNLLAGIENQPRN
****IYRAAISAVDRFVPSKARPLWEHPAGPKTVFFWAPMFKWGLVIAGIGDLTRPAEKLSISQSSALAATGLIWSRYSLVIIPKNWSLFSVNMFVALPCVKLELEDLGECLSNLLAGI******
*****Y**AISAVDRFVPSKARPLWEHPAGPKTVFFWAPMFKWGLVIAGIGDLTRPAEKLSISQSSALAATGLIWSRYSLVIIPKNWSLFSVNMFVALPCVKLELEDLGECLS************
MASAIYRAAISAVDRFVPSKARPLWEHPAGPKTVFFWAPMFKWGLVIAGIGDLTRPAEKLSISQSSALAATGLIWSRYSLVIIPKNWSLFSVNMFVALPCVKLELEDLGECLSNLLAGIENQPRN
*ASAIYRAAISAVDRFVPSKARPLWEHPAGPKTVFFWAPMFKWGLVIAGIGDLTRPAEKLSISQSSALAATGLIWSRYSLVIIPKNWSLFSVNMFVALPCVKLELEDLGECLSNLLAGIENQ***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MASAIYRAAISAVDRFVPSKARPLWEHPAGPKTVFFWAPMFKWGLVIAGIGDLTRPAEKLSISQSSALAATGLIWSRYSLVIIPKNWSLFSVNMFVALPCVKLELEDLGECLSNLLAGIENQPRN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query125 2.2.26 [Sep-21-2011]
O95563127 Mitochondrial pyruvate ca yes N/A 0.752 0.740 0.659 5e-32
Q5R4Z3127 Mitochondrial pyruvate ca yes N/A 0.752 0.740 0.648 8e-31
Q9D023127 Mitochondrial pyruvate ca yes N/A 0.736 0.724 0.663 1e-27
P38718127 Mitochondrial pyruvate ca yes N/A 0.736 0.724 0.663 1e-27
O01578133 Probable mitochondrial py yes N/A 0.736 0.691 0.593 2e-25
Q09896118 Probable mitochondrial py yes N/A 0.616 0.652 0.571 3e-20
P53311146 Mitochondrial pyruvate ca yes N/A 0.608 0.520 0.565 8e-19
P38857129 Mitochondrial pyruvate ca no N/A 0.616 0.596 0.545 4e-18
P63031109 Mitochondrial pyruvate ca no N/A 0.496 0.568 0.338 2e-05
P63030109 Mitochondrial pyruvate ca no N/A 0.496 0.568 0.338 2e-05
>sp|O95563|MPC2_HUMAN Mitochondrial pyruvate carrier 2 OS=Homo sapiens GN=MPC2 PE=1 SV=1 Back     alignment and function desciption
 Score =  136 bits (342), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 62/94 (65%), Positives = 73/94 (77%)

Query: 4   AIYRAAISAVDRFVPSKARPLWEHPAGPKTVFFWAPMFKWGLVIAGIGDLTRPAEKLSIS 63
           A Y   +  V+  +P K RPL+ HPAGP+TVFFWAP+ KWGLV AG+ D+ RPAEKLS +
Sbjct: 11  ATYHRLLDKVELMLPEKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTA 70

Query: 64  QSSALAATGLIWSRYSLVIIPKNWSLFSVNMFVA 97
           QS+ L ATG IWSRYSLVIIPKNWSLF+VN FV 
Sbjct: 71  QSAVLMATGFIWSRYSLVIIPKNWSLFAVNFFVG 104





Homo sapiens (taxid: 9606)
>sp|Q5R4Z3|MPC2_PONAB Mitochondrial pyruvate carrier 2 OS=Pongo abelii GN=MPC2 PE=2 SV=1 Back     alignment and function description
>sp|Q9D023|MPC2_MOUSE Mitochondrial pyruvate carrier 2 OS=Mus musculus GN=Mpc2 PE=1 SV=1 Back     alignment and function description
>sp|P38718|MPC2_RAT Mitochondrial pyruvate carrier 2 OS=Rattus norvegicus GN=Mpc2 PE=2 SV=1 Back     alignment and function description
>sp|O01578|MPC1_CAEEL Probable mitochondrial pyruvate carrier 1 OS=Caenorhabditis elegans GN=F53F10.3 PE=3 SV=2 Back     alignment and function description
>sp|Q09896|MPC1_SCHPO Probable mitochondrial pyruvate carrier 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24B11.09 PE=3 SV=1 Back     alignment and function description
>sp|P53311|MPC3_YEAST Mitochondrial pyruvate carrier 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FMP43 PE=1 SV=1 Back     alignment and function description
>sp|P38857|MPC2_YEAST Mitochondrial pyruvate carrier 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHR162W PE=1 SV=1 Back     alignment and function description
>sp|P63031|MPC1_RAT Mitochondrial pyruvate carrier 1 OS=Rattus norvegicus GN=Mpc1 PE=2 SV=1 Back     alignment and function description
>sp|P63030|MPC1_MOUSE Mitochondrial pyruvate carrier 1 OS=Mus musculus GN=Mpc1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query125
321459408119 hypothetical protein DAPPUDRAFT_231612 [ 0.784 0.823 0.806 1e-40
242247139127 brain protein 44-like [Acyrthosiphon pis 0.76 0.748 0.8 4e-39
391342507123 PREDICTED: brain protein 44-like [Metase 0.776 0.788 0.773 7e-39
189234289117 PREDICTED: similar to AGAP004906-PA [Tri 0.792 0.846 0.757 1e-38
270002637148 hypothetical protein TcasGA2_TC004964 [T 0.768 0.648 0.781 1e-38
389608969116 similar to CG9399 [Papilio xuthus] 0.768 0.827 0.770 8e-38
242004226115 brain protein, putative [Ixodes scapular 0.768 0.834 0.760 1e-37
114051131120 light-induced protein-like brain protein 0.792 0.825 0.737 3e-37
242013993117 Brain protein, putative [Pediculus human 0.76 0.811 0.747 3e-36
156554397121 PREDICTED: brain protein 44-like [Nasoni 0.808 0.834 0.673 4e-36
>gi|321459408|gb|EFX70462.1| hypothetical protein DAPPUDRAFT_231612 [Daphnia pulex] Back     alignment and taxonomy information
 Score =  170 bits (430), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 79/98 (80%), Positives = 86/98 (87%)

Query: 1  MASAIYRAAISAVDRFVPSKARPLWEHPAGPKTVFFWAPMFKWGLVIAGIGDLTRPAEKL 60
          MASA YRA I+  DRFVP K RPLWEHPAGPKTVFFW+P+FKWGLV+AGIGD+ RP EK+
Sbjct: 1  MASAAYRATINFADRFVPQKMRPLWEHPAGPKTVFFWSPLFKWGLVLAGIGDMNRPVEKV 60

Query: 61 SISQSSALAATGLIWSRYSLVIIPKNWSLFSVNMFVAL 98
          SI QS ALAATG IWSRYSLVIIPKNWSLFSVN+FV L
Sbjct: 61 SIRQSGALAATGFIWSRYSLVIIPKNWSLFSVNLFVGL 98




Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242247139|ref|NP_001156180.1| brain protein 44-like [Acyrthosiphon pisum] gi|239790383|dbj|BAH71756.1| ACYPI005090 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|391342507|ref|XP_003745561.1| PREDICTED: brain protein 44-like [Metaseiulus occidentalis] Back     alignment and taxonomy information
>gi|189234289|ref|XP_970161.2| PREDICTED: similar to AGAP004906-PA [Tribolium castaneum] Back     alignment and taxonomy information
>gi|270002637|gb|EEZ99084.1| hypothetical protein TcasGA2_TC004964 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|389608969|dbj|BAM18096.1| similar to CG9399 [Papilio xuthus] Back     alignment and taxonomy information
>gi|242004226|ref|XP_002436279.1| brain protein, putative [Ixodes scapularis] gi|215499615|gb|EEC09109.1| brain protein, putative [Ixodes scapularis] Back     alignment and taxonomy information
>gi|114051131|ref|NP_001040310.1| light-induced protein-like brain protein 44 [Bombyx mori] gi|87248275|gb|ABD36190.1| light-induced protein-like brain protein 44 [Bombyx mori] Back     alignment and taxonomy information
>gi|242013993|ref|XP_002427683.1| Brain protein, putative [Pediculus humanus corporis] gi|212512113|gb|EEB14945.1| Brain protein, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|156554397|ref|XP_001604232.1| PREDICTED: brain protein 44-like [Nasonia vitripennis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query125
FB|FBgn0037715154 CG9399 [Drosophila melanogaste 0.768 0.623 0.687 6.5e-35
ZFIN|ZDB-GENE-030131-330127 mpc2 "mitochondrial pyruvate c 0.768 0.755 0.677 7.4e-34
ZFIN|ZDB-GENE-040912-107144 zgc:103678 "zgc:103678" [Danio 0.808 0.701 0.607 2.3e-32
FB|FBgn0037714151 CG9396 [Drosophila melanogaste 0.768 0.635 0.666 3.7e-32
UNIPROTKB|E2REX4127 MPC2 "Uncharacterized protein" 0.744 0.732 0.677 4.7e-32
UNIPROTKB|E1BD64127 BRP44 "Uncharacterized protein 0.744 0.732 0.666 9.8e-32
UNIPROTKB|O95563127 MPC2 "Mitochondrial pyruvate c 0.744 0.732 0.666 1.3e-31
UNIPROTKB|Q5R3B4105 MPC2 "Mitochondrial pyruvate c 0.744 0.885 0.666 1.3e-31
MGI|MGI:1917706127 Mpc2 "mitochondrial pyruvate c 0.744 0.732 0.666 1.6e-31
RGD|1563422127 Mpc2 "mitochondrial pyruvate c 0.744 0.732 0.666 1.6e-31
FB|FBgn0037715 CG9399 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
 Identities = 66/96 (68%), Positives = 81/96 (84%)

Query:     3 SAIYRAAISAVDRFVPSKARPLWEHPAGPKTVFFWAPMFKWGLVIAGIGDLTRPAEKLSI 62
             S +Y   I A D+FVP+K RPLW HPAGPKT+FFWAP+FKWGLV AG+ DL RPA+ +S+
Sbjct:    29 SKLYNGMIGAADKFVPAKLRPLWMHPAGPKTIFFWAPVFKWGLVAAGLSDLARPADTISV 88

Query:    63 SQSSALAATGLIWSRYSLVIIPKNWSLFSVNMFVAL 98
             S  +ALAATG+IWSRYSLVIIPKN+SLF+VN+FV +
Sbjct:    89 SGCAALAATGIIWSRYSLVIIPKNYSLFAVNLFVGI 124




GO:0006850 "mitochondrial pyruvate transport" evidence=ISS
GO:0050833 "pyruvate transmembrane transporter activity" evidence=ISS
GO:0031305 "integral to mitochondrial inner membrane" evidence=ISS
GO:0016021 "integral to membrane" evidence=ISM
ZFIN|ZDB-GENE-030131-330 mpc2 "mitochondrial pyruvate carrier 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040912-107 zgc:103678 "zgc:103678" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0037714 CG9396 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|E2REX4 MPC2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E1BD64 BRP44 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|O95563 MPC2 "Mitochondrial pyruvate carrier 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q5R3B4 MPC2 "Mitochondrial pyruvate carrier 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1917706 Mpc2 "mitochondrial pyruvate carrier 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1563422 Mpc2 "mitochondrial pyruvate carrier 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O95563MPC2_HUMANNo assigned EC number0.65950.7520.7401yesN/A
Q5R4Z3MPC2_PONABNo assigned EC number0.64890.7520.7401yesN/A
P38718MPC2_RATNo assigned EC number0.66300.7360.7244yesN/A
Q9D023MPC2_MOUSENo assigned EC number0.66300.7360.7244yesN/A
Q09896MPC1_SCHPONo assigned EC number0.57140.6160.6525yesN/A
O01578MPC1_CAEELNo assigned EC number0.59370.7360.6917yesN/A
P53311MPC3_YEASTNo assigned EC number0.56570.6080.5205yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query125
pfam03650120 pfam03650, UPF0041, Uncharacterized protein family 5e-35
>gnl|CDD|217658 pfam03650, UPF0041, Uncharacterized protein family (UPF0041) Back     alignment and domain information
 Score =  116 bits (293), Expect = 5e-35
 Identities = 47/82 (57%), Positives = 58/82 (70%)

Query: 17 VPSKARPLWEHPAGPKTVFFWAPMFKWGLVIAGIGDLTRPAEKLSISQSSALAATGLIWS 76
            +  +  W H AGPKTV FWAP  KWGLV+AG+GDL RP EK+S  Q+SAL AT  IW+
Sbjct: 2  FRAAFKRFWNHEAGPKTVHFWAPTLKWGLVLAGLGDLKRPPEKISGPQNSALLATSAIWT 61

Query: 77 RYSLVIIPKNWSLFSVNMFVAL 98
          R+SLV+ PKN+ L SVN F+  
Sbjct: 62 RWSLVVKPKNYLLASVNFFLEC 83


Length = 120

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 125
PF03650119 MPC: Uncharacterised protein family (UPF0041); Int 100.0
KOG1589|consensus118 100.0
KOG1590|consensus132 100.0
PF0308387 MtN3_slv: Sugar efflux transporter for intercellul 96.13
KOG1623|consensus243 84.66
>PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function Back     alignment and domain information
Probab=100.00  E-value=5e-54  Score=319.03  Aligned_cols=99  Identities=54%  Similarity=0.898  Sum_probs=97.3

Q ss_pred             CcccchhhhhCCCCCCcccccccccccchhhhhcccCCCCccccccccchhHHHHhHHHhhhhheeeccchhhhhhhhhh
Q psy9841          17 VPSKARPLWEHPAGPKTVFFWAPMFKWGLVIAGIGDLTRPAEKLSISQSSALAATGLIWSRYSLVIIPKNWSLFSVNMFV   96 (125)
Q Consensus        17 ~~~~~~~~~~~p~Gp~T~hFWgPv~kWgi~iA~l~D~~rppe~IS~~mt~aL~~tg~iw~Rys~~I~PrNy~L~a~n~~~   96 (125)
                      +|+.++++|+||+||||||||||++|||||||||+|++||||+||++||+|||+||+||||||++|+||||+||+||++|
T Consensus         2 ~~~~~~~~~~~~~gp~T~hFWaP~~kWgl~iA~i~D~~rppe~IS~~qt~aL~~tg~iw~Rys~~I~P~Ny~L~a~n~~~   81 (119)
T PF03650_consen    2 FPAKFRRFWNSPAGPKTTHFWAPVAKWGLPIAGIADMKRPPEKISGPQTSALCATGLIWMRYSLVITPRNYLLFACNFFN   81 (119)
T ss_pred             hhHHHHHHHcCccccceEEeehhheeheeeeeehhhcCCCHHHHhHHHHHHHHHHHHHHHHHheeecCchHHHHHHHHHH
Confidence            57889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhHHHHhhhccchhhh
Q psy9841          97 ALPCVKLELEDLGECLSNL  115 (125)
Q Consensus        97 ~~~q~~ql~R~~~~~~sq~  115 (125)
                      +++|+||++|+++|+++|.
T Consensus        82 ~~~q~~Ql~R~~~y~~~~~  100 (119)
T PF03650_consen   82 ATTQLYQLYRKLNYQYSQK  100 (119)
T ss_pred             HHHHHHHHHHHHHHHhhcC
Confidence            9999999999999999987



>KOG1589|consensus Back     alignment and domain information
>KOG1590|consensus Back     alignment and domain information
>PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] Back     alignment and domain information
>KOG1623|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00