ECOD: domain e1by4C1

Domain ID e1by4C1

A: few secondary structure elements
X: Glucocorticoid receptor-like
H: LIM domain-like
T: LIM domain-like
F: zf-C4

UID:	000089653
Type:	Automatic domain
Parent:	e1dszA1
Range:	C:2134-2208
Ligands:	ZN
PDB:	1by4
PDB Description:	PROTEIN (RETINOIC ACID RECEPTOR RXR-ALPHA)
UniProt:	P19793
Hsap BLAST neighbor:	P19793
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e1by4C1

Domains in the same chain:

Download Pymol

e1by4C1	C:2134-2208	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like

Domains in the same PDB:

e1by4A1	A:1134-1208	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e1by4B1	B:1234-1308	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e1by4C1	C:2134-2208	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e1by4D1	D:2234-2308	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like

Structural contacts of domain e1by4C1 of H-group "LIM domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1by4B1	C:x,y,z->B:X,Y,Z	LIM domain-like	Interaction Interface Pymol
e1by4D1	C:-X+1,Y-1/2,-Z+2->D:x,y,z	LIM domain-like	Interaction Interface Pymol
e1by4D1	C:X,Y,Z->D:x,y,z	LIM domain-like	Interaction Interface Pymol