Domain ID e2qr0D1

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  • A: few secondary structure elements
  • X: Cystine-knot cytokines
  • H: Cystine-knot cytokines
  • T: Cystine-knot cytokines
  • F: PDGF
UID: 000090617
Type: Automatic domain
Parent: e1pdgA1
Range: D:13-107
PDB: 2qr0
PDB Description: Vascular endothelial growth factor A
UniProt: P15692
Hsap BLAST neighbor: P15692
Species: Homo sapiens

Structure of domain e2qr0D1

Domains in the same chain:

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e2qr0D1 D:13-107 Cystine-knot cytokines Cystine-knot cytokines Cystine-knot cytokines

Domains in the same PDB:

e2qr0A1 A:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0A2 A:108-211 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0B1 B:12-111 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0B2 B:114-216 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0C1 C:13-107 Cystine-knot cytokines Cystine-knot cytokines Cystine-knot cytokines
e2qr0D1 D:13-107 Cystine-knot cytokines Cystine-knot cytokines Cystine-knot cytokines
e2qr0E1 E:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0E2 E:108-211 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0F1 F:12-111 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0F2 F:114-216 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0G1 G:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0G2 G:108-211 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0H1 H:12-111 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0H2 H:114-216 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0I1 I:13-107 Cystine-knot cytokines Cystine-knot cytokines Cystine-knot cytokines
e2qr0J1 J:13-107 Cystine-knot cytokines Cystine-knot cytokines Cystine-knot cytokines
e2qr0K1 K:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0K2 K:108-211 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0L1 L:12-111 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0L2 L:114-216 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0M1 M:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0M2 M:108-211 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0N1 N:12-111 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0N2 N:114-216 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0O1 O:13-107 Cystine-knot cytokines Cystine-knot cytokines Cystine-knot cytokines
e2qr0P1 P:13-107 Cystine-knot cytokines Cystine-knot cytokines Cystine-knot cytokines
e2qr0Q1 Q:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0Q2 Q:108-211 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0R1 R:12-111 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0R2 R:114-216 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0S1 S:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0S2 S:108-211 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0T1 T:12-111 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0T2 T:114-216 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0U1 U:13-107 Cystine-knot cytokines Cystine-knot cytokines Cystine-knot cytokines
e2qr0V1 V:13-107 Cystine-knot cytokines Cystine-knot cytokines Cystine-knot cytokines
e2qr0W1 W:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0W2 W:108-211 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0X1 X:12-111 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2qr0X2 X:114-216 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e2qr0D1 of H-group "Cystine-knot cytokines":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2qr0C1 D:x,y,z->C:X,Y,Z Cystine-knot cytokines Interaction Interface Pymol
e2qr0B1 D:X,Y,Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2qr0E1 D:X,Y,Z->E:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2qr0A1 D:X,Y,Z->A:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2qr0N1 D:X,Y,Z-1->N:x,y,z Immunoglobulin-related Interaction Interface Pymol