Domain ID e1pdgA1

Download files:
  • A: few secondary structure elements
  • X: Cystine-knot cytokines
  • H: Cystine-knot cytokines
  • T: Cystine-knot cytokines
  • F: PDGF
UID: 000008302
Type: Manual and representative domain
Range: A:9-104
PDB: 1pdg
PDB Description: PLATELET-DERIVED GROWTH FACTOR BB
UniProt: P01127
Hsap BLAST neighbor: P01127
Species: Homo sapiens

Structure of domain e1pdgA1

Structural contacts of domain e1pdgA1 of H-group "Cystine-knot cytokines":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1pdgB1 A:X,Y,Z->B:x,y,z Cystine-knot cytokines Interaction Interface Pymol
e1pdgA1 A:x,y,z->A:-X+1/2,Y-1/2,-Z+1 Cystine-knot cytokines Interaction Interface Pymol
e1pdgA1 A:-X+1/2,Y-1/2,-Z+1->A:x,y,z Cystine-knot cytokines Interaction Interface Pymol
e1pdgC1 A:x,y,z->C:X,Y-1,Z Cystine-knot cytokines Interaction Interface Pymol
e1pdgB1 A:x,y,z->B:-X+1/2,Y-1/2,-Z+1 Cystine-knot cytokines Interaction Interface Pymol