ECOD: domain e4dkdC4

Domain ID e4dkdC4

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
F: Unmapped domains

UID:	001163912
Type:	Automatic domain
Parent:	e2oz4A3
Range:	C:20-202
Ligands:	NAG
PDB:	4dkd
PDB Description:	MACROPHAGE COLONY-STIMULATING FACTOR 1 RECEPTOR
UniProt:	P07333
Hsap BLAST neighbor:	P07333
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4dkdC4

Domains in the same chain:

Download Pymol

e4dkdC4	C:20-202	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4dkdC5	C:203-295	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e4dkdA1	A:18-178	Ferritin/Heme oxygenase/4-helical cytokines	4-helical cytokines	4-helical cytokines
e4dkdB1	B:18-178	Ferritin/Heme oxygenase/4-helical cytokines	4-helical cytokines	4-helical cytokines
e4dkdC4	C:20-202	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4dkdC5	C:203-295	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4dkdC4 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4dkdA1	C:x,y,z->A:X,Y,Z	4-helical cytokines	Interaction Interface Pymol
e4dkdB1	C:x,y,z->B:-X-1,-X+Y-1,-Z+1/3	4-helical cytokines	Interaction Interface Pymol
e4dkdC5	C:-X-1,-X+Y-1,-Z+1/3->C:x,y,z	Immunoglobulin-related	Interaction Interface Pymol