ECOD: domain e4dkdC5

Domain ID e4dkdC5

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
F: ig

UID:	001163913
Type:	Automatic domain
Parent:	e2c9aA2
Range:	C:203-295
Ligands:	NAG
PDB:	4dkd
PDB Description:	MACROPHAGE COLONY-STIMULATING FACTOR 1 RECEPTOR
UniProt:	P07333
Hsap BLAST neighbor:	P07333
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4dkdC5

Domains in the same chain:

Download Pymol

e4dkdC4	C:20-202	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4dkdC5	C:203-295	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e4dkdA1	A:18-178	Ferritin/Heme oxygenase/4-helical cytokines	4-helical cytokines	4-helical cytokines
e4dkdB1	B:18-178	Ferritin/Heme oxygenase/4-helical cytokines	4-helical cytokines	4-helical cytokines
e4dkdC4	C:20-202	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e4dkdC5	C:203-295	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e4dkdC5 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4dkdA1	C:x,y,z->A:X,Y,Z	4-helical cytokines	Interaction Interface Pymol
e4dkdC4	C:x,y,z->C:-X-1,-X+Y-1,-Z+1/3	Immunoglobulin-related	Interaction Interface Pymol