Domain ID e4kumA2

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: FAD/NAD(P)-binding domain
  • F: Amino_oxidase
UID: 001289135
Type: Automatic domain
Parent: e1b5qA2
Range: A:274-639,A:747-836
Ligands: CL FAD GOL THG
PDB: 4kum
PDB Description: LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A
UniProt: O60341
Hsap BLAST neighbor: O60341
Species: Homo sapiens

Structure of domain e4kumA2

Structural contacts of domain e4kumA2 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4kumB1 A:X,Y,Z->B:x,y,z Helical region in REST corepressor 1 Interaction Interface Pymol
e4kumB1 A:X,Y,Z->B:x,y,z Helical region in REST corepressor 1 Interaction Interface Pymol
e4kumA2 A:x,y,z->A:-X+1,Y,-Z Rossmann-related Interaction Interface Pymol
e4kumA2 A:-X+1,Y,-Z->A:x,y,z Rossmann-related Interaction Interface Pymol
e4kumA2 A:x,y,z->A:-X+1,-Y+1,Z Rossmann-related Interaction Interface Pymol
e4kumA2 A:-X+1,-Y+1,Z->A:x,y,z Rossmann-related Interaction Interface Pymol
e4kumA2 A:x,y,z->A:-X+1/2,Y-1/2,-Z+1/2 Rossmann-related Interaction Interface Pymol
e4kumA1 A:x,y,z->A:-X+1/2,Y-1/2,-Z+1/2 FAD-linked reductases-C Interaction Interface Pymol
e4kumA2 A:-X+1/2,Y-1/2,-Z+1/2->A:x,y,z Rossmann-related Interaction Interface Pymol
e4kumB1 A:X-1/2,-Y+1/2,-Z+1/2->B:x,y,z Helical region in REST corepressor 1 Interaction Interface Pymol
e4kumA1 A:x,y,z->A:X-1/2,-Y+1/2,-Z+1/2 FAD-linked reductases-C Interaction Interface Pymol