| UID: | 001289135 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1b5qA2 |
| Range: | A:274-639,A:747-836 |
| Ligands: | CL FAD GOL THG |
| PDB: | 4kum |
| PDB Description: | LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A |
| UniProt: | O60341 |
| Hsap BLAST neighbor: | O60341 |
| Species: | Homo sapiens |
Structure of domain e4kumA2
Domains in the same chain:
| e4kumA3 | A:171-273 | HTH | HTH | tri-helical |
| e4kumA2 | A:274-639,A:747-836 | Rossmann-like | Rossmann-related | FAD/NAD(P)-binding domain |
| e4kumA1 | A:640-746 | FAD-linked reductases, C-terminal domain-like | FAD-linked reductases-C | FAD-linked reductases-C |
Domains in the same PDB:
Structural contacts of domain e4kumA2 of H-group "Rossmann-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4kumB1 | A:X,Y,Z->B:x,y,z | Helical region in REST corepressor 1 | Interaction Interface Pymol |
| e4kumB1 | A:X,Y,Z->B:x,y,z | Helical region in REST corepressor 1 | Interaction Interface Pymol |
| e4kumA2 | A:x,y,z->A:-X+1,Y,-Z | Rossmann-related | Interaction Interface Pymol |
| e4kumA2 | A:-X+1,Y,-Z->A:x,y,z | Rossmann-related | Interaction Interface Pymol |
| e4kumA2 | A:x,y,z->A:-X+1,-Y+1,Z | Rossmann-related | Interaction Interface Pymol |
| e4kumA2 | A:-X+1,-Y+1,Z->A:x,y,z | Rossmann-related | Interaction Interface Pymol |
| e4kumA2 | A:x,y,z->A:-X+1/2,Y-1/2,-Z+1/2 | Rossmann-related | Interaction Interface Pymol |
| e4kumA1 | A:x,y,z->A:-X+1/2,Y-1/2,-Z+1/2 | FAD-linked reductases-C | Interaction Interface Pymol |
| e4kumA2 | A:-X+1/2,Y-1/2,-Z+1/2->A:x,y,z | Rossmann-related | Interaction Interface Pymol |
| e4kumB1 | A:X-1/2,-Y+1/2,-Z+1/2->B:x,y,z | Helical region in REST corepressor 1 | Interaction Interface Pymol |
| e4kumA1 | A:x,y,z->A:X-1/2,-Y+1/2,-Z+1/2 | FAD-linked reductases-C | Interaction Interface Pymol |
