Domain ID e1aqdJ1

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: C1-set
UID: 000038790
Type: Automatic domain
Parent: e1k5nB1
Range: J:82-179
PDB: 1aqd
PDB Description: HLA-DR1 CLASS II HISTOCOMPATIBILITY PROTEIN
UniProt: P01903
Hsap BLAST neighbor: P01903
Species: Homo sapiens

Structure of domain e1aqdJ1

Domains in the same chain:

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e1aqdJ2 J:3-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1aqdJ1 J:82-179 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e1aqdA2 A:3-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1aqdA1 A:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1aqdB2 B:4-87 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1aqdB1 B:95-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1aqdD2 D:3-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1aqdD1 D:82-179 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1aqdE2 E:4-87 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1aqdE1 E:95-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1aqdG2 G:3-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1aqdG1 G:82-179 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1aqdH2 H:4-87 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1aqdH1 H:95-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1aqdJ2 J:3-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1aqdJ1 J:82-179 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1aqdK2 K:4-91 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1aqdK1 K:95-191 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e1aqdJ1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1aqdK1 J:X,Y,Z->K:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1aqdK1 J:X,Y,Z->K:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1aqdH1 J:X,Y,Z->H:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1aqdH1 J:-X+1,Y,-Z->E:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1aqdG1 J:x,y,z->G:X,Y,Z Immunoglobulin-related Interaction Interface Pymol