Domain ID e1aroP2

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  • A: alpha arrays
  • X: helical bundle in Bacillus stearothermophilus-like DNA polymerase I
  • H: helical bundle in Bacillus stearothermophilus-like DNA polymerase I
  • T: helical bundle in Bacillus stearothermophilus-like DNA polymerase I
  • F: RNA_pol
UID: 001307394
Type: Automatic domain
Parent: e1mswD1
Range: P:553-589,P:612-779
Ligands: HG
PDB: 1aro
PDB Description: T7 RNA POLYMERASE
UniProt: P00573
Hsap BLAST neighbor: O00411
Species: Enterobacteria phage T7

Structure of domain e1aroP2

Domains in the same chain:

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e1aroP4 P:8-262 HTH HTH HTH in T7 RNA polymerase
e1aroP6 P:263-344,P:384-448 "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I
e1aroP5 P:449-528 inserted helical bundle subdomain in T7 RNA polymerase inserted helical bundle subdomain in T7 RNA polymerase inserted helical bundle subdomain in T7 RNA polymerase
e1aroP3 P:529-552,P:780-879 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1aroP2 P:553-589,P:612-779 helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I

Domains in the same PDB:

e1aroL1 L:1002-1150 N-acetylmuramoyl-L-alanine amidase-like N-acetylmuramoyl-L-alanine amidase-like N-acetylmuramoyl-L-alanine amidase-like
e1aroP4 P:8-262 HTH HTH HTH in T7 RNA polymerase
e1aroP6 P:263-344,P:384-448 "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I
e1aroP5 P:449-528 inserted helical bundle subdomain in T7 RNA polymerase inserted helical bundle subdomain in T7 RNA polymerase inserted helical bundle subdomain in T7 RNA polymerase
e1aroP3 P:529-552,P:780-879 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1aroP2 P:553-589,P:612-779 helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I

Structural contacts of domain e1aroP2 of H-group "helical bundle in Bacillus stearothermophilus-like DNA polymerase I":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1aroL1 P:X,Y,Z->L:x,y,z N-acetylmuramoyl-L-alanine amidase-like Interaction Interface Pymol
e1aroL1 P:x,y,z->P:-X+1/2,Y-1/2,-Z N-acetylmuramoyl-L-alanine amidase-like Interaction Interface Pymol
e1aroP5 P:x,y,z->P:-X+1/2,Y-1/2,-Z inserted helical bundle subdomain in T7 RNA polymerase Interaction Interface Pymol
e1aroP5 P:x,y,z->P:X,Y,Z-1 inserted helical bundle subdomain in T7 RNA polymerase Interaction Interface Pymol
e1aroL1 P:x,y,z->L:X,Y,Z-1 N-acetylmuramoyl-L-alanine amidase-like Interaction Interface Pymol