Domain ID e1b6kB1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: acid protease
  • F: RVP
UID: 000020224
Type: Automatic domain
Range: B:101-199
Ligands: PI5 SO4
PDB: 1b6k
PDB Description: RETROPEPSIN
UniProt: P03369
Species: Human immunodeficiency virus 1

Structure of domain e1b6kB1

Structural contacts of domain e1b6kB1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1b6kA1 B:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol
e1b6kA1 B:X-1,Y,Z->A:x,y,z RIFT-related Interaction Interface Pymol
e1b6kA1 B:x,y,z->A:-X,Y-1/2,-Z+1/2 RIFT-related Interaction Interface Pymol
e1b6kA1 B:-X+1/2,-Y,Z-1/2->A:x,y,z RIFT-related Interaction Interface Pymol
e1b6kA1 B:x,y,z->A:-X+1/2,-Y,Z-1/2 RIFT-related Interaction Interface Pymol
e1b6kA1 B:-X,Y-1/2,-Z+1/2->A:x,y,z RIFT-related Interaction Interface Pymol
e1b6kB1 B:x,y,z->B:-X+1,Y-1/2,-Z+1/2 RIFT-related Interaction Interface Pymol
e1b6kB1 B:-X+1,Y-1/2,-Z+1/2->B:x,y,z RIFT-related Interaction Interface Pymol
e1b6kB1 B:x,y,z->B:-X,Y-1/2,-Z+1/2 RIFT-related Interaction Interface Pymol
e1b6kB1 B:-X,Y-1/2,-Z+1/2->B:x,y,z RIFT-related Interaction Interface Pymol
e1b6kB1 B:x,y,z->B:-X+1/2,-Y,Z-1/2 RIFT-related Interaction Interface Pymol
e1b6kB1 B:-X+1/2,-Y,Z-1/2->B:x,y,z RIFT-related Interaction Interface Pymol
e1b6kB1 B:x,y,z->B:X-1/2,-Y+1/2,-Z+1 RIFT-related Interaction Interface Pymol
e1b6kB1 B:X-1/2,-Y+1/2,-Z+1->B:x,y,z RIFT-related Interaction Interface Pymol