ECOD: domain e1b8hB2

Domain ID e1b8hB2

A: a+b two layers
X: DNA clamp
H: DNA clamp
T: DNA clamp
F: gp45-slide_C

UID:	000071019
Type:	Automatic domain
Parent:	e1b77A2
Range:	B:111-228
PDB:	1b8h
PDB Description:	DNA POLYMERASE PROCESSIVITY COMPONENT
UniProt:	O80164
Species:	Enterobacteria phage RB69

Domains in the same chain:

Download Pymol

e1b8hB1	B:1-110	DNA clamp	DNA clamp	DNA clamp
e1b8hB2	B:111-228	DNA clamp	DNA clamp	DNA clamp

Domains in the same PDB:

e1b8hA1	A:1-110	DNA clamp	DNA clamp	DNA clamp
e1b8hA2	A:111-228	DNA clamp	DNA clamp	DNA clamp
e1b8hB1	B:1-110	DNA clamp	DNA clamp	DNA clamp
e1b8hB2	B:111-228	DNA clamp	DNA clamp	DNA clamp
e1b8hC1	C:1-110	DNA clamp	DNA clamp	DNA clamp
e1b8hC2	C:111-228	DNA clamp	DNA clamp	DNA clamp

Structural contacts of domain e1b8hB2 of H-group "DNA clamp":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1b8hC1	B:X-1/2,-Y+3/2,-Z+2->C:x,y,z	DNA clamp	Interaction Interface Pymol
e1b8hA1	B:x,y,z->A:X,Y,Z	DNA clamp	Interaction Interface Pymol
e1b8hC2	B:x,y,z->C:X,Y-1,Z	DNA clamp	Interaction Interface Pymol
e1b8hA2	B:x,y,z->A:-X+1/2,-Y+1,Z-1/2	DNA clamp	Interaction Interface Pymol