ECOD: domain e1bjtA5

Domain ID e1bjtA5

A: alpha bundles
X: alpha-helical domain in type II DNA topoisomerase
H: alpha-helical domain in type II DNA topoisomerase
T: alpha-helical domain in type II DNA topoisomerase
F: DNA_topoisoIV

UID:	000004690
Type:	Manual and representative domain
Range:	A:989-1071,A:1107-1178
PDB:	1bjt
PDB Description:	TOPOISOMERASE II
UniProt:	P06786
Hsap BLAST neighbor:	Q02880
Species:	Saccharomyces cerevisiae

Domains in the same chain:

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Domains in the same PDB:

Structural contacts of domain e1bjtA5 of H-group "alpha-helical domain in type II DNA topoisomerase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1bjtA5	A:x,y,z->A:-X,Y,-Z+1/2	alpha-helical domain in type II DNA topoisomerase	Interaction Interface Pymol
e1bjtA5	A:-X,Y,-Z+1/2->A:x,y,z	alpha-helical domain in type II DNA topoisomerase	Interaction Interface Pymol
e1bjtA2	A:-X-1/2,Y-1/2,-Z+1/2->A:x,y,z	HAD domain-related	Interaction Interface Pymol
e1bjtA3	A:-X-1/2,Y-1/2,-Z+1/2->A:x,y,z	SSHS domain in type II DNA topoisomerase	Interaction Interface Pymol

e1bjtA2	A:419-561,A:605-693	HAD domain-like	HAD domain-related	Toprim domain
e1bjtA3	A:562-604	SSHS domain	SSHS domain in type II DNA topoisomerase	SSHS domain in type II DNA topoisomerase
e1bjtA1	A:694-822	HTH	HTH	winged
e1bjtA4	A:823-988	a+b domain in type II DNA topoisomerase	a+b domain in type II DNA topoisomerase	a+b domain in type II DNA topoisomerase
e1bjtA5	A:989-1071,A:1107-1178	alpha-helical domain in type II DNA topoisomerase	alpha-helical domain in type II DNA topoisomerase	alpha-helical domain in type II DNA topoisomerase

e1bjtA2	A:419-561,A:605-693	HAD domain-like	HAD domain-related	Toprim domain
e1bjtA3	A:562-604	SSHS domain	SSHS domain in type II DNA topoisomerase	SSHS domain in type II DNA topoisomerase
e1bjtA1	A:694-822	HTH	HTH	winged
e1bjtA4	A:823-988	a+b domain in type II DNA topoisomerase	a+b domain in type II DNA topoisomerase	a+b domain in type II DNA topoisomerase
e1bjtA5	A:989-1071,A:1107-1178	alpha-helical domain in type II DNA topoisomerase	alpha-helical domain in type II DNA topoisomerase	alpha-helical domain in type II DNA topoisomerase