ECOD: domain e1bmlA1

Domain ID e1bmlA1

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: FMN-binding split barrel 2
F: Trypsin

UID:	000023257
Type:	Automatic domain
Parent:	e3gch.1
Range:	A:562-787
PDB:	1bml
PDB Description:	PLASMIN
UniProt:	P00747
Hsap BLAST neighbor:	P00747
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e1bmlA1

Domains in the same chain:

Download Pymol

e1bmlA1	A:562-787	cradle loop barrel	RIFT-related	FMN-binding split barrel 2

Domains in the same PDB:

e1bmlA1	A:562-787	cradle loop barrel	RIFT-related	FMN-binding split barrel 2
e1bmlB1	B:562-787	cradle loop barrel	RIFT-related	FMN-binding split barrel 2
e1bmlC1	C:14-45,C:71-147	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e1bmlC2	C:151-284	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e1bmlC3	C:285-372	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e1bmlD1	D:14-45,D:71-147	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e1bmlD2	D:151-284	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e1bmlD3	D:285-372	beta-Grasp	Ubiquitin-related	Ubiquitin-like

Structural contacts of domain e1bmlA1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1bmlC1	A:X,Y,Z->C:x,y,z	Ubiquitin-related	Interaction Interface Pymol
e1bmlC2	A:X,Y,Z->C:x,y,z	Ubiquitin-related	Interaction Interface Pymol
e1bmlC3	A:X,Y,Z->C:x,y,z	Ubiquitin-related	Interaction Interface Pymol
e1bmlD1	A:-X+1,Y-1/2,-Z->D:x,y,z	Ubiquitin-related	Interaction Interface Pymol
e1bmlD3	A:X-1,Y,Z->D:x,y,z	Ubiquitin-related	Interaction Interface Pymol
e1bmlB1	A:X,Y,Z->B:x,y,z	RIFT-related	Interaction Interface Pymol
e1bmlB1	A:X-1,Y,Z->B:x,y,z	RIFT-related	Interaction Interface Pymol
e1bmlD3	A:X,Y,Z->D:x,y,z	Ubiquitin-related	Interaction Interface Pymol