ECOD: domain e1bndA1

Domain ID e1bndA1

A: few secondary structure elements
X: Cystine-knot cytokines
H: Cystine-knot cytokines
T: Cystine-knot cytokines
F: NGF

UID:	000008308
Type:	Manual and representative domain
Range:	A:8-116
Ligands:	IPA
PDB:	1bnd
PDB Description:	BRAIN DERIVED NEUROTROPHIC FACTOR
UniProt:	P23560
Hsap BLAST neighbor:	P23560
Species:	Homo sapiens

Domains in the same chain:

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e1bndA1	A:8-116	Cystine-knot cytokines	Cystine-knot cytokines	Cystine-knot cytokines

Domains in the same PDB:

e1bndA1	A:8-116	Cystine-knot cytokines	Cystine-knot cytokines	Cystine-knot cytokines
e1bndB1	B:9-116	Cystine-knot cytokines	Cystine-knot cytokines	Cystine-knot cytokines

Structural contacts of domain e1bndA1 of H-group "Cystine-knot cytokines":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1bndB1	A:X,Y,Z->B:x,y,z	Cystine-knot cytokines	Interaction Interface Pymol
e1bndA1	A:x,y,z->A:-X+1,Y,-Z+1	Cystine-knot cytokines	Interaction Interface Pymol
e1bndA1	A:-X+1,Y,-Z+1->A:x,y,z	Cystine-knot cytokines	Interaction Interface Pymol
e1bndB1	A:-X+1/2,Y-1/2,-Z+1->B:x,y,z	Cystine-knot cytokines	Interaction Interface Pymol
e1bndB1	A:-X+1,Y,-Z+2->B:x,y,z	Cystine-knot cytokines	Interaction Interface Pymol
e1bndA1	A:x,y,z->A:-X+1,Y,-Z+2	Cystine-knot cytokines	Interaction Interface Pymol
e1bndA1	A:-X+1,Y,-Z+2->A:x,y,z	Cystine-knot cytokines	Interaction Interface Pymol
e1bndA1	A:x,y,z->A:-X+1/2,Y-1/2,-Z+1	Cystine-knot cytokines	Interaction Interface Pymol
e1bndA1	A:-X+1/2,Y-1/2,-Z+1->A:x,y,z	Cystine-knot cytokines	Interaction Interface Pymol
e1bndB1	A:-X+1/2,Y-1/2,-Z+2->B:x,y,z	Cystine-knot cytokines	Interaction Interface Pymol