Domain ID e1bpyA3

Download files:
  • A: a+b three layers
  • X: Nucleotidyltransferase-like
  • H: Nucleotidyltransferase
  • T: Nucleotidyltransferase
  • F: DNA_pol_B_thumb,DNA_pol_B_palm
UID: 000078021
Type: Automatic domain
Parent: e2fmpA3
Range: A:149-335
Ligands: DCT MG
PDB: 1bpy
PDB Description: PROTEIN (DNA POLYMERASE BETA)
UniProt: P06746
Hsap BLAST neighbor: P06746
Species: Homo sapiens

Structure of domain e1bpyA3

Structural contacts of domain e1bpyA3 of H-group "Nucleotidyltransferase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1bpyA2 A:x,y,z->A:X-1,Y,Z SAM/DNA-glycosylase Interaction Interface Pymol
e1bpyA1 A:x,y,z->A:X-1,Y,Z SAM/DNA-glycosylase Interaction Interface Pymol
e1bpyA3 A:x,y,z->A:X,Y,Z-1 Nucleotidyltransferase Interaction Interface Pymol
e1bpyA3 A:X,Y,Z-1->A:x,y,z Nucleotidyltransferase Interaction Interface Pymol
e1bpyA2 A:-X,Y-1/2,-Z->A:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol
e1bpyA2 A:-X+1,Y-1/2,-Z->A:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol