Domain ID e1bqmB1

Download files:
  • A: alpha bundles
  • X: helical bundle domain in reverse transcriptase-like polymerases
  • H: helical bundle domain in reverse transcriptase-like polymerases
  • T: helical bundle domain in reverse transcriptase-like polymerases
  • F: RVT_thumb
UID: 000054834
Type: Automatic domain
Parent: e2zd1B1
Range: B:242-315
PDB: 1bqm
PDB Description: REVERSE TRANSCRIPTASE
UniProt: P03366
Species: Human immunodeficiency virus 1

Structure of domain e1bqmB1

Domains in the same chain:

Download Pymol

e1bqmB2 B:5-241 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1bqmB1 B:242-315 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e1bqmB3 B:316-427 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Domains in the same PDB:

e1bqmA2 A:5-241 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1bqmA1 A:242-315 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e1bqmA4 A:316-427 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e1bqmA3 A:431-556 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1bqmB2 B:5-241 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1bqmB1 B:242-315 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e1bqmB3 B:316-427 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Structural contacts of domain e1bqmB1 of H-group "helical bundle domain in reverse transcriptase-like polymerases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1bqmA3 B:x,y,z->A:X,Y,Z Ribonuclease H-like Interaction Interface Pymol
e1bqmA4 B:X,Y-1,Z->A:x,y,z RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e1bqmB1 B:x,y,z->B:-X+1,Y,-Z+1 helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e1bqmB1 B:-X+1,Y,-Z+1->B:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol