ECOD: domain e1c4kA4

Domain ID e1c4kA4

A: a/b three-layered sandwiches
X: PLP-dependent transferases
H: PLP-dependent transferases
T: PLP-dependent transferases
F: OKR_DC_1

UID:	000010777
Type:	Manual and representative domain
Range:	A:108-413
Ligands:	GTP PLP
PDB:	1c4k
PDB Description:	PROTEIN (ORNITHINE DECARBOXYLASE)
UniProt:	P43099
Species:	Lactobacillus sp. 30A

Domains in the same chain:

Download Pymol

e1c4kA3	A:1-107	Flavodoxin-like	Class I glutamine amidotransferase-like	CheY-like
e1c4kA4	A:108-413	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e1c4kA2	A:414-569	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases
e1c4kA1	A:570-730	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase

Domains in the same PDB:

e1c4kA3	A:1-107	Flavodoxin-like	Class I glutamine amidotransferase-like	CheY-like
e1c4kA4	A:108-413	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e1c4kA2	A:414-569	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases
e1c4kA1	A:570-730	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase

Structural contacts of domain e1c4kA4 of H-group "PLP-dependent transferases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1c4kA4	A:x,y,z->A:-X+2,-X+Y+1,-Z+2/3	PLP-dependent transferases	Interaction Interface Pymol
e1c4kA3	A:x,y,z->A:-X+2,-X+Y+1,-Z+2/3	Class I glutamine amidotransferase-like	Interaction Interface Pymol
e1c4kA2	A:x,y,z->A:-X+2,-X+Y+1,-Z+2/3	C-terminal domain in some PLP-dependent transferases	Interaction Interface Pymol
e1c4kA1	A:x,y,z->A:-X+2,-X+Y+1,-Z+2/3	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	Interaction Interface Pymol
e1c4kA2	A:-X+2,-X+Y+1,-Z+2/3->A:x,y,z	C-terminal domain in some PLP-dependent transferases	Interaction Interface Pymol
e1c4kA1	A:-X+2,-X+Y+1,-Z+2/3->A:x,y,z	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	Interaction Interface Pymol
e1c4kA4	A:-X+2,-X+Y+1,-Z+2/3->A:x,y,z	PLP-dependent transferases	Interaction Interface Pymol
e1c4kA3	A:-X+2,-X+Y+1,-Z+2/3->A:x,y,z	Class I glutamine amidotransferase-like	Interaction Interface Pymol
e1c4kA2	A:-Y+1,X-Y,Z-1/3->A:x,y,z	C-terminal domain in some PLP-dependent transferases	Interaction Interface Pymol
e1c4kA1	A:x,y,z->A:X-Y,-Y,-Z+1/3	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	Interaction Interface Pymol
e1c4kA1	A:X-Y,-Y,-Z+1/3->A:x,y,z	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	Interaction Interface Pymol