Domain ID e1c8yA1

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Glyco_hydro_18
UID: 000095102
Type: Automatic domain
Parent: e1narA1
Range: A:6-270
Ligands: ZN
PDB: 1c8y
PDB Description: ENDO-BETA-N-ACETYLGLUCOSAMINIDASE H
UniProt: P04067
Species: Streptomyces plicatus

Structure of domain e1c8yA1

Domains in the same chain:

e1c8yA1 A:6-270 TIM beta/alpha-barrel TIM barrels TIM barrels

Domains in the same PDB:

e1c8yA1 A:6-270 TIM beta/alpha-barrel TIM barrels TIM barrels

Structural contacts of domain e1c8yA1 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1c8yA1 A:x,y,z->A:-X+3/2,Y-1/2,-Z+3/4 TIM barrels Interaction Interface Pymol
e1c8yA1 A:-X+3/2,Y-1/2,-Z+3/4->A:x,y,z TIM barrels Interaction Interface Pymol
e1c8yA1 A:x,y,z->A:-Y+3/2,X-1/2,Z-1/4 TIM barrels Interaction Interface Pymol
e1c8yA1 A:-Y+3/2,X-1/2,Z-1/4->A:x,y,z TIM barrels Interaction Interface Pymol
e1c8yA1 A:x,y,z->A:Y+1,X-1,-Z+1 TIM barrels Interaction Interface Pymol
e1c8yA1 A:Y+1,X-1,-Z+1->A:x,y,z TIM barrels Interaction Interface Pymol
e1c8yA1 A:x,y,z->A:-Y+1,-X+1,-Z+1/2 TIM barrels Interaction Interface Pymol
e1c8yA1 A:-Y+1,-X+1,-Z+1/2->A:x,y,z TIM barrels Interaction Interface Pymol
e1c8yA1 A:x,y,z->A:-Y+1/2,X-1/2,Z-1/4 TIM barrels Interaction Interface Pymol
e1c8yA1 A:-Y+1/2,X-1/2,Z-1/4->A:x,y,z TIM barrels Interaction Interface Pymol
e1c8yA1 A:x,y,z->A:Y,X,-Z+1 TIM barrels Interaction Interface Pymol
e1c8yA1 A:Y,X,-Z+1->A:x,y,z TIM barrels Interaction Interface Pymol