ECOD: domain e1cd3B1

Domain ID e1cd3B1

A: a+b complex topology
X: Scaffolding protein GPB
H: Scaffolding protein GPB
T: Scaffolding protein GPB
F: Phage_B

UID:	001002534
Type:	Manual and representative domain
Range:	B:1-8,B:61-120
PDB:	1cd3
PDB Description:	PROTEIN (SCAFFOLDING PROTEIN GPB)
UniProt:	P03633
Species:

Domain
In chain context
In PDB context

Structure of domain e1cd3B1

Domains in the same chain:

Download Pymol

e1cd3B1	B:1-8,B:61-120	Scaffolding protein GPB	Scaffolding protein GPB	Scaffolding protein GPB

Domains in the same PDB:

e1cd311	1:7-144	Scaffolding protein gpD of bacteriophage procapsid	Scaffolding protein gpD of bacteriophage procapsid	Scaffolding protein gpD of bacteriophage procapsid
e1cd321	2:7-140	Scaffolding protein gpD of bacteriophage procapsid	Scaffolding protein gpD of bacteriophage procapsid	Scaffolding protein gpD of bacteriophage procapsid
e1cd331	3:7-144	Scaffolding protein gpD of bacteriophage procapsid	Scaffolding protein gpD of bacteriophage procapsid	Scaffolding protein gpD of bacteriophage procapsid
e1cd342	4:7-152	Scaffolding protein gpD of bacteriophage procapsid	Scaffolding protein gpD of bacteriophage procapsid	Scaffolding protein gpD of bacteriophage procapsid
e1cd3B1	B:1-8,B:61-120	Scaffolding protein GPB	Scaffolding protein GPB	Scaffolding protein GPB
e1cd3F1	F:1-426	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e1cd3G1	G:1-175	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)

Structural contacts of domain e1cd3B1 of H-group "Scaffolding protein GPB":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1cd3F1	B:x,y,z->F:X,Y,Z	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol