| UID: | 001307618 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1gl9C4 |
| Range: | A:157-214,A:461-595 |
| Ligands: | PO4 T3P TMP |
| PDB: | 1cy8 |
| PDB Description: | DNA TOPOISOMERASE I |
| UniProt: | P06612 |
| Hsap BLAST neighbor: | O95985 |
| Species: |
Structure of domain e1cy8A2
Domains in the same chain:
| e1cy8A1 | A:2-38,A:62-156 | HAD domain-like | HAD domain-related | Toprim domain |
| e1cy8A2 | A:157-214,A:461-595 | HTH | HTH | winged |
| e1cy8A4 | A:215-280,A:396-460 | LigT-like | Prokaryotic type I DNA topoisomerase beta-barrel domain | Prokaryotic type I DNA topoisomerase beta-barrel domain |
| e1cy8A3 | A:281-395 | HTH | HTH | winged |
Domains in the same PDB:
| e1cy8A1 | A:2-38,A:62-156 | HAD domain-like | HAD domain-related | Toprim domain |
| e1cy8A2 | A:157-214,A:461-595 | HTH | HTH | winged |
| e1cy8A4 | A:215-280,A:396-460 | LigT-like | Prokaryotic type I DNA topoisomerase beta-barrel domain | Prokaryotic type I DNA topoisomerase beta-barrel domain |
| e1cy8A3 | A:281-395 | HTH | HTH | winged |
Structural contacts of domain e1cy8A2 of H-group "HTH":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1cy8A4 | A:X-1/2,-Y+1/2,-Z->A:x,y,z | Prokaryotic type I DNA topoisomerase beta-barrel domain | Interaction Interface Pymol |
| e1cy8A3 | A:x,y,z->A:-X+1,Y-1/2,-Z+1/2 | HTH | Interaction Interface Pymol |
| e1cy8A4 | A:x,y,z->A:-X+1,Y-1/2,-Z+1/2 | Prokaryotic type I DNA topoisomerase beta-barrel domain | Interaction Interface Pymol |
| e1cy8A3 | A:X-1,Y,Z->A:x,y,z | HTH | Interaction Interface Pymol |
| e1cy8A1 | A:x,y,z->A:-X+3/2,-Y+1,Z-1/2 | HAD domain-related | Interaction Interface Pymol |
| e1cy8A3 | A:x,y,z->A:-X+2,Y-1/2,-Z+1/2 | HTH | Interaction Interface Pymol |
