ECOD: domain e1cygA4

Domain ID e1cygA4

A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels
T: TIM barrels
F: Alpha-amylase

UID:	000094203
Type:	Automatic domain
Parent:	e1ua7A2
Range:	A:1-402
Ligands:	CA
PDB:	1cyg
PDB Description:	CYCLODEXTRIN GLUCANOTRANSFERASE
UniProt:	P31797
Hsap BLAST neighbor:	Q07837
Species:	Geobacillus stearothermophilus

Domain
In chain context
In PDB context

Structure of domain e1cygA4

Domains in the same chain:

Download Pymol

e1cygA4	A:1-402	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e1cygA3	A:403-491	Glycosyl hydrolase domain-like	Glycosyl hydrolase domain	Glycosyl hydrolase domain
e1cygA1	A:492-574	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1cygA2	A:575-680	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like

Domains in the same PDB:

e1cygA4	A:1-402	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e1cygA3	A:403-491	Glycosyl hydrolase domain-like	Glycosyl hydrolase domain	Glycosyl hydrolase domain
e1cygA1	A:492-574	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1cygA2	A:575-680	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like

Structural contacts of domain e1cygA4 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1cygA1	A:x,y,z->A:-X+1/2,-Y+2,Z-1/2	Immunoglobulin-related	Interaction Interface Pymol
e1cygA3	A:-X+1/2,-Y+2,Z-1/2->A:x,y,z	Glycosyl hydrolase domain	Interaction Interface Pymol
e1cygA2	A:-X+1/2,-Y+3,Z-1/2->A:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1cygA2	A:x,y,z->A:X-1/2,-Y+5/2,-Z+1	Immunoglobulin-related	Interaction Interface Pymol