ECOD: domain e1d2eB3

Domain ID e1d2eB3

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: GTP_EFTU

UID:	000101538
Type:	Automatic domain
Parent:	e2c78A3
Range:	B:55-249
Ligands:	GDP MG
PDB:	1d2e
PDB Description:	ELONGATION FACTOR TU (EF-TU)
UniProt:	P49410
Hsap BLAST neighbor:	P49411
Species:	Bos taurus

Domain
In chain context
In PDB context

Structure of domain e1d2eB3

Domains in the same chain:

Download Pymol

e1d2eB3	B:55-249	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1d2eB1	B:251-348	cradle loop barrel	RIFT-related	Alanine racemase-C
e1d2eB2	B:349-441	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain

Domains in the same PDB:

e1d2eA3	A:55-249	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1d2eA1	A:251-348	cradle loop barrel	RIFT-related	Alanine racemase-C
e1d2eA2	A:349-441	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain
e1d2eB3	B:55-249	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1d2eB1	B:251-348	cradle loop barrel	RIFT-related	Alanine racemase-C
e1d2eB2	B:349-441	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain
e1d2eC3	C:55-249	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1d2eC1	C:251-348	cradle loop barrel	RIFT-related	Alanine racemase-C
e1d2eC2	C:349-441	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain
e1d2eD3	D:55-249	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1d2eD1	D:251-348	cradle loop barrel	RIFT-related	Alanine racemase-C
e1d2eD2	D:349-441	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain

Structural contacts of domain e1d2eB3 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1d2eC1	B:X,Y,Z->C:x,y,z	RIFT-related	Interaction Interface Pymol
e1d2eC1	B:x,y,z->C:X-1,Y,Z	RIFT-related	Interaction Interface Pymol
e1d2eC2	B:-X+2,Y-1/2,-Z+2->C:x,y,z	RIFT-related	Interaction Interface Pymol
e1d2eC2	B:-X+1,Y-1/2,-Z+2->C:x,y,z	RIFT-related	Interaction Interface Pymol
e1d2eA3	B:-X+1,Y-1/2,-Z+1->A:x,y,z	P-loop domains-related	Interaction Interface Pymol