Domain ID e1d2rB1

Download files:
  • A: a/b three-layered sandwiches
  • X: HUP domain-like
  • H: HUP domains
  • T: HUP domains
  • F: tRNA-synt_1b
UID: 000103086
Type: Automatic domain
Parent: e1i6lA1
Range: B:1-326
PDB: 1d2r
PDB Description: PROTEIN (TRYPTOPHANYL TRNA SYNTHETASE)
UniProt: P00953
Hsap BLAST neighbor: Q9UGM6
Species: Geobacillus stearothermophilus

Structure of domain e1d2rB1

Structural contacts of domain e1d2rB1 of H-group "HUP domains":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1d2rE1 B:X,Y,Z->E:x,y,z HUP domains Interaction Interface Pymol
e1d2rA1 B:-X+1,Y-1,-Z+1->A:x,y,z HUP domains Interaction Interface Pymol
e1d2rB1 B:x,y,z->B:-X+3/2,Y-1/2,-Z+1 HUP domains Interaction Interface Pymol
e1d2rB1 B:-X+3/2,Y-1/2,-Z+1->B:x,y,z HUP domains Interaction Interface Pymol
e1d2rE1 B:-X+1,Y,-Z+1->E:x,y,z HUP domains Interaction Interface Pymol
e1d2rD1 B:-X+1,Y-1,-Z+1->D:x,y,z HUP domains Interaction Interface Pymol
e1d2rD1 B:X-1,Y-1,Z-1->D:x,y,z HUP domains Interaction Interface Pymol