| UID: | 000046966 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1volA1 |
| Range: | B:1108-1205 |
| PDB: | 1d3u |
| PDB Description: | TRANSCRIPTION INITIATION FACTOR IIB |
| UniProt: | P61999 |
| Hsap BLAST neighbor: | Q00403 |
| Species: | Pyrococcus woesei |
Structure of domain e1d3uB1
Domains in the same chain:
| e1d3uB1 | B:1108-1205 | HTH | HTH | Cyclin-like |
| e1d3uB2 | B:1206-1300 | HTH | HTH | Cyclin-like |
Domains in the same PDB:
| e1d3uA1 | A:1-92 | TBP-like | TATA-box binding protein-like | TATA-box binding protein-like |
| e1d3uA2 | A:93-181 | TBP-like | TATA-box binding protein-like | TATA-box binding protein-like |
| e1d3uB1 | B:1108-1205 | HTH | HTH | Cyclin-like |
| e1d3uB2 | B:1206-1300 | HTH | HTH | Cyclin-like |
Structural contacts of domain e1d3uB1 of H-group "HTH":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1d3uA2 | B:x,y,z->A:X,Y,Z | TATA-box binding protein-like | Interaction Interface Pymol |
| e1d3uB1 | B:x,y,z->B:X,-Y-1,-Z+3/2 | HTH | Interaction Interface Pymol |
| e1d3uB1 | B:X,-Y-1,-Z+3/2->B:x,y,z | HTH | Interaction Interface Pymol |
| e1d3uA2 | B:x,y,z->A:-Y-1/2,-Z,X+1/2 | TATA-box binding protein-like | Interaction Interface Pymol |
