ECOD: domain e1d4vA2

Domain ID e1d4vA2

A: few secondary structure elements
X: EGF-like
H: EGF-related
T: TNF receptor-like
F: TNFR_c6

UID:	000091725
Type:	Automatic domain
Parent:	e1d0gR2
Range:	A:115-154
PDB:	1d4v
PDB Description:	DEATH RECEPTOR 5
UniProt:	O14763
Hsap BLAST neighbor:	O14763
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e1d4vA1	A:74-114	EGF-like	EGF-related	TNF receptor-like
e1d4vA2	A:115-154	EGF-like	EGF-related	TNF receptor-like
e1d4vA3	A:155-181	EGF-like	EGF-related	TNF receptor-like

Domains in the same PDB:

e1d4vA1	A:74-114	EGF-like	EGF-related	TNF receptor-like
e1d4vA2	A:115-154	EGF-like	EGF-related	TNF receptor-like
e1d4vA3	A:155-181	EGF-like	EGF-related	TNF receptor-like
e1d4vB1	B:120-281	jelly-roll	TNF-like	TNF-like

Structural contacts of domain e1d4vA2 of H-group "EGF-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1d4vB1	A:-Y+1,X-Y,Z->B:x,y,z	TNF-like	Interaction Interface Pymol
e1d4vB1	A:x,y,z->B:X,Y,Z	TNF-like	Interaction Interface Pymol
e1d4vA2	A:x,y,z->A:-X+2,-X+Y+1,-Z+1	EGF-related	Interaction Interface Pymol
e1d4vA1	A:x,y,z->A:-X+2,-X+Y+1,-Z+1	EGF-related	Interaction Interface Pymol
e1d4vA1	A:-X+2,-X+Y+1,-Z+1->A:x,y,z	EGF-related	Interaction Interface Pymol
e1d4vA2	A:-X+2,-X+Y+1,-Z+1->A:x,y,z	EGF-related	Interaction Interface Pymol