ECOD: domain e1d4yA1

Domain ID e1d4yA1

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: acid protease
F: RVP

UID:	000020407
Type:	Automatic domain
Range:	A:1-99
Ligands:	TPV
PDB:	1d4y
PDB Description:	PROTEIN (HIV-1 PROTEASE)
UniProt:	P03367
Species:	Human immunodeficiency virus 1

Structural contacts of domain e1d4yA1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1d4yB1	A:X,Y,Z->B:x,y,z	RIFT-related	Interaction Interface Pymol
e1d4yB1	A:x,y,z->B:X-1/2,-Y+1/2,-Z	RIFT-related	Interaction Interface Pymol
e1d4yB1	A:-X+1/2,Y-1/2,-Z->B:x,y,z	RIFT-related	Interaction Interface Pymol
e1d4yB1	A:X,Y,Z-1->B:x,y,z	RIFT-related	Interaction Interface Pymol
e1d4yB1	A:X-1/2,-Y+1/2,-Z->B:x,y,z	RIFT-related	Interaction Interface Pymol
e1d4yA1	A:x,y,z->A:X-1/2,-Y+1/2,-Z	RIFT-related	Interaction Interface Pymol
e1d4yA1	A:X-1/2,-Y+1/2,-Z->A:x,y,z	RIFT-related	Interaction Interface Pymol

e1d4yA1	A:1-99	cradle loop barrel	RIFT-related	acid protease
e1d4yB1	B:1-99	cradle loop barrel	RIFT-related	acid protease