Domain ID e1d9kC2

Download files:
  • A: a+b two layers
  • X: MHC antigen-recognition domain
  • H: MHC antigen-recognition domain
  • T: MHC antigen-recognition domain
  • F: MHC_II_alpha
UID: 000075399
Type: Automatic domain
Parent: e1hdmA2
Range: C:1-81
Ligands: NDG
PDB: 1d9k
PDB Description: MHC I-AK A CHAIN (ALPHA CHAIN)
UniProt: P01910
Hsap BLAST neighbor: P01906
Species: Mus musculus

Structure of domain e1d9kC2

Domains in the same chain:

e1d9kC2 C:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1d9kC1 C:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e1d9kA1 A:2-117 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1d9kB1 B:3-116C Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1d9kC2 C:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1d9kC1 C:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1d9kD2 D:2-94 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1d9kD1 D:95-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1d9kE1 E:2-117 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1d9kF1 F:3-116C Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1d9kG2 G:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1d9kG1 G:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1d9kH2 H:2-94 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1d9kH1 H:95-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e1d9kC2 of H-group "MHC antigen-recognition domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1d9kD1 C:X,Y,Z->D:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1d9kD1 C:X,Y,Z->D:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1d9kF1 C:X,Y,Z-1->F:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1d9kB1 C:x,y,z->B:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e1d9kB1 C:x,y,z->B:X-1/2,-Y+1/2,-Z Immunoglobulin-related Interaction Interface Pymol
e1d9kA1 C:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol