Domain ID e1d9yA1

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: SBP_bac_1
UID: 001519977
Type: Automatic domain
Parent: e1nnfA2
Range: A:1-100,A:226-309
Ligands: FE PO4
PDB: 1d9y
PDB Description: PROTEIN (PERIPLASMIC IRON-BINDING PROTEIN)
UniProt: Q50964
Species: Neisseria gonorrhoeae

Structure of domain e1d9yA1

Structural contacts of domain e1d9yA1 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1d9yA2 A:x,y,z->A:-X,Y,-Z+1/2 Periplasmic binding protein-like II Interaction Interface Pymol
e1d9yA2 A:-X,Y,-Z+1/2->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e1d9yA1 A:x,y,z->A:X-1/2,-Y+1/2,-Z+1 Periplasmic binding protein-like II Interaction Interface Pymol
e1d9yA1 A:X-1/2,-Y+1/2,-Z+1->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e1d9yA1 A:x,y,z->A:X-1,Y,Z Periplasmic binding protein-like II Interaction Interface Pymol
e1d9yA1 A:X-1,Y,Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e1d9yA2 A:X-1/2,Y-1/2,Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol