ECOD: domain e1dceC3

Domain ID e1dceC3

A: beta duplicates or obligate multimers
X: Single-stranded right-handed beta-helix
H: Leucine-rich repeats
T: Leucine-rich repeats
F: Unmapped domains

UID:	000081011
Type:	Automatic domain
Parent:	e1dceA3
Range:	C:444-567
PDB:	1dce
PDB Description:	PROTEIN (RAB GERANYLGERANYLTRANSFERASE ALPHA SUBUNIT)
UniProt:	Q08602
Hsap BLAST neighbor:	Q92696
Species:	Rattus norvegicus

Domain
In chain context
In PDB context

Structure of domain e1dceC3

Domains in the same chain:

Download Pymol

e1dceC2	C:1-241,C:351-443	Repetitive alpha hairpins	ARM repeat	ARM repeat
e1dceC1	C:242-350	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1dceC3	C:444-567	Single-stranded right-handed beta-helix	Leucine-rich repeats	Leucine-rich repeats

Domains in the same PDB:

e1dceA2	A:1-241,A:351-443	Repetitive alpha hairpins	ARM repeat	ARM repeat
e1dceA1	A:242-350	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1dceA3	A:444-567	Single-stranded right-handed beta-helix	Leucine-rich repeats	Leucine-rich repeats
e1dceB1	B:7-331	Repetitive alpha hairpins	alpha/alpha toroid	alpha/alpha toroid
e1dceC2	C:1-241,C:351-443	Repetitive alpha hairpins	ARM repeat	ARM repeat
e1dceC1	C:242-350	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1dceC3	C:444-567	Single-stranded right-handed beta-helix	Leucine-rich repeats	Leucine-rich repeats
e1dceD1	D:7-331	Repetitive alpha hairpins	alpha/alpha toroid	alpha/alpha toroid

Structural contacts of domain e1dceC3 of H-group "Leucine-rich repeats":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1dceD1	C:X,Y,Z->D:x,y,z	alpha/alpha toroid	Interaction Interface Pymol
e1dceC2	C:X-1,Y+1,Z->C:x,y,z	ARM repeat	Interaction Interface Pymol
e1dceC2	C:x,y,z->C:X,Y-1,Z	ARM repeat	Interaction Interface Pymol