Domain ID e1dcnB1

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  • A: alpha arrays
  • X: L-aspartase middle domain-like
  • H: L-aspartase middle domain-like
  • T: L-aspartase middle domain-like
  • F: Lyase_1
UID: 001128366
Type: Automatic domain
Parent: e1c3cA1
Range: B:113-358,B:442-465
Ligands: AS1
PDB: 1dcn
PDB Description: DELTA 2 CRYSTALLIN
UniProt: P24058
Hsap BLAST neighbor: P04424
Species: Anas platyrhynchos

Structure of domain e1dcnB1

Domains in the same chain:

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e1dcnB3 B:20-113 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e1dcnB1 B:113-358,B:442-465 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e1dcnB2 B:358-441 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like

Domains in the same PDB:

e1dcnA3 A:33-113 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e1dcnA4 A:114-357,A:442-465 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e1dcnA2 A:358-441 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e1dcnB3 B:20-113 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e1dcnB1 B:113-358,B:442-465 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e1dcnB2 B:358-441 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e1dcnC3 C:19-113 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e1dcnC4 C:114-357,C:442-465 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e1dcnC2 C:358-441 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e1dcnD3 D:21-113 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e1dcnD4 D:114-357,D:442-465 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e1dcnD2 D:358-441 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like

Structural contacts of domain e1dcnB1 of H-group "L-aspartase middle domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1dcnD2 B:X,Y,Z->D:x,y,z L-aspartase C-terminal domain-like Interaction Interface Pymol
e1dcnD4 B:X,Y,Z->D:x,y,z L-aspartase middle domain-like Interaction Interface Pymol
e1dcnC4 B:X,Y,Z->C:x,y,z L-aspartase middle domain-like Interaction Interface Pymol
e1dcnC3 B:X,Y,Z->C:x,y,z L-aspartase N-terminal domain-like Interaction Interface Pymol
e1dcnA4 B:x,y,z->A:X,Y,Z L-aspartase middle domain-like Interaction Interface Pymol
e1dcnD4 B:-X+2,Y-1/2,-Z+2->D:x,y,z L-aspartase middle domain-like Interaction Interface Pymol