Domain ID e1ddoH2

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: Nucleotide-binding domain
  • F: DAO
UID: 000099180
Type: Automatic domain
Parent: e1kifA2
Range: H:1-194,H:288-339
Ligands: FAD ITR
PDB: 1ddo
PDB Description: D-AMINO ACID OXIDASE
UniProt: P00371
Hsap BLAST neighbor: P14920
Species: Sus scrofa

Structure of domain e1ddoH2

Domains in the same chain:

e1ddoH2 H:1-194,H:288-339 Rossmann-like Rossmann-related Nucleotide-binding domain
e1ddoH1 H:195-287 FAD-linked reductases, C-terminal domain-like FAD-linked reductases-C FAD-linked reductases-C

Domains in the same PDB:

e1ddoA2 A:1-194,A:288-339 Rossmann-like Rossmann-related Nucleotide-binding domain
e1ddoA1 A:195-287 FAD-linked reductases, C-terminal domain-like FAD-linked reductases-C FAD-linked reductases-C
e1ddoB2 B:1-194,B:288-339 Rossmann-like Rossmann-related Nucleotide-binding domain
e1ddoB1 B:195-287 FAD-linked reductases, C-terminal domain-like FAD-linked reductases-C FAD-linked reductases-C
e1ddoC2 C:1-194,C:288-339 Rossmann-like Rossmann-related Nucleotide-binding domain
e1ddoC1 C:195-287 FAD-linked reductases, C-terminal domain-like FAD-linked reductases-C FAD-linked reductases-C
e1ddoD2 D:1-194,D:288-339 Rossmann-like Rossmann-related Nucleotide-binding domain
e1ddoD1 D:195-287 FAD-linked reductases, C-terminal domain-like FAD-linked reductases-C FAD-linked reductases-C
e1ddoE2 E:1-194,E:288-339 Rossmann-like Rossmann-related Nucleotide-binding domain
e1ddoE1 E:195-287 FAD-linked reductases, C-terminal domain-like FAD-linked reductases-C FAD-linked reductases-C
e1ddoF2 F:1-194,F:288-339 Rossmann-like Rossmann-related Nucleotide-binding domain
e1ddoF1 F:195-287 FAD-linked reductases, C-terminal domain-like FAD-linked reductases-C FAD-linked reductases-C
e1ddoG2 G:1-194,G:288-339 Rossmann-like Rossmann-related Nucleotide-binding domain
e1ddoG1 G:195-287 FAD-linked reductases, C-terminal domain-like FAD-linked reductases-C FAD-linked reductases-C
e1ddoH2 H:1-194,H:288-339 Rossmann-like Rossmann-related Nucleotide-binding domain
e1ddoH1 H:195-287 FAD-linked reductases, C-terminal domain-like FAD-linked reductases-C FAD-linked reductases-C

Structural contacts of domain e1ddoH2 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1ddoD1 H:x,y,z->D:X,Y,Z FAD-linked reductases-C Interaction Interface Pymol
e1ddoD2 H:x,y,z->D:X,Y,Z Rossmann-related Interaction Interface Pymol
e1ddoC1 H:x,y,z->C:X,Y,Z FAD-linked reductases-C Interaction Interface Pymol
e1ddoC2 H:x,y,z->C:X,-Y+1,-Z Rossmann-related Interaction Interface Pymol
e1ddoC2 H:x,y,z->C:-X+1,Y,-Z+1/2 Rossmann-related Interaction Interface Pymol
e1ddoG2 H:x,y,z->G:X,-Y+1,-Z Rossmann-related Interaction Interface Pymol
e1ddoH1 H:x,y,z->H:-X+1,Y,-Z+1/2 FAD-linked reductases-C Interaction Interface Pymol
e1ddoH1 H:-X+1,Y,-Z+1/2->H:x,y,z FAD-linked reductases-C Interaction Interface Pymol
e1ddoA2 H:-X+1/2,Y-1/2,-Z+1/2->A:x,y,z Rossmann-related Interaction Interface Pymol