Domain ID e1dgfB1

Download files:
  • A: beta barrels
  • X: Barrel domain in heme-dependent catalases
  • H: Barrel domain in heme-dependent catalases
  • T: Barrel domain in heme-dependent catalases
  • F: Catalase
UID: 000028568
Type: Automatic domain
Parent: e1gweA1
Range: B:20-149,B:206-434
Ligands: ACT HEM
PDB: 1dgf
PDB Description: CATALASE
UniProt: P04040
Hsap BLAST neighbor: P04040
Species: Homo sapiens

Structure of domain e1dgfB1

Domains in the same chain:

e1dgfB1 B:20-149,B:206-434 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e1dgfB2 B:150-205 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e1dgfB3 B:435-501 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases

Domains in the same PDB:

e1dgfA1 A:20-149,A:206-434 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e1dgfA2 A:150-205 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e1dgfA3 A:435-501 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e1dgfB1 B:20-149,B:206-434 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e1dgfB2 B:150-205 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e1dgfB3 B:435-501 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e1dgfC1 C:20-149,C:206-434 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e1dgfC2 C:150-205 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e1dgfC3 C:435-501 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e1dgfD1 D:20-149,D:206-434 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e1dgfD2 D:150-205 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e1dgfD3 D:435-501 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases

Structural contacts of domain e1dgfB1 of H-group "Barrel domain in heme-dependent catalases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1dgfD2 B:X,Y,Z->D:x,y,z First alpha-helical domain in heme-dependent catalases Interaction Interface Pymol
e1dgfD1 B:X,Y,Z->D:x,y,z Barrel domain in heme-dependent catalases Interaction Interface Pymol
e1dgfA1 B:x,y,z->A:X,Y,Z Barrel domain in heme-dependent catalases Interaction Interface Pymol
e1dgfC3 B:X,Y,Z->C:x,y,z Second alpha-helical domain in heme-dependent catalases Interaction Interface Pymol
e1dgfC2 B:X,Y,Z->C:x,y,z First alpha-helical domain in heme-dependent catalases Interaction Interface Pymol
e1dgfC1 B:X,Y,Z->C:x,y,z Barrel domain in heme-dependent catalases Interaction Interface Pymol
e1dgfD3 B:x,y,z->D:X-1/2,-Y+1/2,-Z Second alpha-helical domain in heme-dependent catalases Interaction Interface Pymol
e1dgfA1 B:x,y,z->A:-X,Y-1/2,-Z+1/2 Barrel domain in heme-dependent catalases Interaction Interface Pymol
e1dgfD1 B:x,y,z->D:X-1,Y,Z Barrel domain in heme-dependent catalases Interaction Interface Pymol