Domain ID e1dggB1

Download files:
  • A: beta barrels
  • X: Barrel domain in heme-dependent catalases
  • H: Barrel domain in heme-dependent catalases
  • T: Barrel domain in heme-dependent catalases
  • F: Catalase
UID: 000028547
Type: Automatic domain
Parent: e1gweA1
Range: B:20-149,B:206-434
Ligands: CYN HEM
PDB: 1dgg
PDB Description: CATALASE
UniProt: P04040
Hsap BLAST neighbor: P04040
Species: Homo sapiens

Structure of domain e1dggB1

Domains in the same chain:

e1dggB1 B:20-149,B:206-434 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e1dggB2 B:150-205 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e1dggB3 B:435-501 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases

Domains in the same PDB:

e1dggA1 A:20-149,A:206-434 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e1dggA2 A:150-205 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e1dggA3 A:435-501 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e1dggB1 B:20-149,B:206-434 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e1dggB2 B:150-205 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e1dggB3 B:435-501 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e1dggC1 C:20-149,C:206-434 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e1dggC2 C:150-205 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e1dggC3 C:435-501 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e1dggD1 D:20-149,D:206-434 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e1dggD2 D:150-205 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e1dggD3 D:435-501 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases

Structural contacts of domain e1dggB1 of H-group "Barrel domain in heme-dependent catalases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1dggD2 B:X,Y,Z->D:x,y,z First alpha-helical domain in heme-dependent catalases Interaction Interface Pymol
e1dggD1 B:X,Y,Z->D:x,y,z Barrel domain in heme-dependent catalases Interaction Interface Pymol
e1dggA1 B:x,y,z->A:X,Y,Z Barrel domain in heme-dependent catalases Interaction Interface Pymol
e1dggC1 B:X,Y,Z->C:x,y,z Barrel domain in heme-dependent catalases Interaction Interface Pymol
e1dggC3 B:X,Y,Z->C:x,y,z Second alpha-helical domain in heme-dependent catalases Interaction Interface Pymol
e1dggC2 B:X,Y,Z->C:x,y,z First alpha-helical domain in heme-dependent catalases Interaction Interface Pymol
e1dggC3 B:-X,Y-1/2,-Z+1/2->C:x,y,z Second alpha-helical domain in heme-dependent catalases Interaction Interface Pymol
e1dggD1 B:x,y,z->D:X-1,Y,Z Barrel domain in heme-dependent catalases Interaction Interface Pymol