ECOD: domain e1dq3A4

Domain ID e1dq3A4

A: a+b two layers
X: dsRBD-like
H: PI-Pfui intein middle domain
T: PI-Pfui intein middle domain
F: Stirrup

UID:	000005828
Type:	Manual and representative domain
Range:	A:336-414
PDB:	1dq3
PDB Description:	ENDONUCLEASE
UniProt:	E7FHX6
Species:	Pyrococcus furiosus

Domains in the same chain:

Download Pymol

e1dq3A1	A:1-128,A:415-454	Hedgehog/intein	Hedgehog/intein	Hint
e1dq3A2	A:129-226	Homing endonucleases-like	Homing endonucleases	Homing endonucleases
e1dq3A3	A:227-335	Homing endonucleases-like	Homing endonucleases	Homing endonucleases
e1dq3A4	A:336-414	dsRBD-like	PI-Pfui intein middle domain	PI-Pfui intein middle domain

Domains in the same PDB:

e1dq3A1	A:1-128,A:415-454	Hedgehog/intein	Hedgehog/intein	Hint
e1dq3A2	A:129-226	Homing endonucleases-like	Homing endonucleases	Homing endonucleases
e1dq3A3	A:227-335	Homing endonucleases-like	Homing endonucleases	Homing endonucleases
e1dq3A4	A:336-414	dsRBD-like	PI-Pfui intein middle domain	PI-Pfui intein middle domain

Structural contacts of domain e1dq3A4 of H-group "PI-Pfui intein middle domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1dq3A3	A:X-1,Y,Z->A:x,y,z	Homing endonucleases	Interaction Interface Pymol
e1dq3A2	A:X-1,Y,Z->A:x,y,z	Homing endonucleases	Interaction Interface Pymol
e1dq3A2	A:x,y,z->A:-X+1,Y-1/2,-Z+1	Homing endonucleases	Interaction Interface Pymol
e1dq3A3	A:x,y,z->A:-X+2,Y-1/2,-Z+1	Homing endonucleases	Interaction Interface Pymol
e1dq3A1	A:x,y,z->A:-X+2,Y-1/2,-Z+1	Hedgehog/intein	Interaction Interface Pymol