Domain ID e1dtqB3

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: RNaseH-like domain in reverse transcriptase
  • T: RNaseH-like domain in reverse transcriptase
  • F: RVT_connect
UID: 000115986
Type: Automatic domain
Parent: e2zd1B3
Range: B:316-427
PDB: 1dtq
PDB Description: HIV-1 RT B-CHAIN
UniProt: P04585
Species: Human immunodeficiency virus 1

Structure of domain e1dtqB3

Domains in the same chain:

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e1dtqB2 B:5-241 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1dtqB1 B:242-315 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e1dtqB3 B:316-427 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Domains in the same PDB:

e1dtqA11 A:4-242 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1dtqA10 A:243-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e1dtqA9 A:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e1dtqA12 A:429-539 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1dtqB2 B:5-241 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1dtqB1 B:242-315 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e1dtqB3 B:316-427 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Structural contacts of domain e1dtqB3 of H-group "RNaseH-like domain in reverse transcriptase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1dtqA12 B:x,y,z->A:X,Y,Z Ribonuclease H-like Interaction Interface Pymol
e1dtqA9 B:x,y,z->A:X,Y,Z RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e1dtqA10 B:x,y,z->A:-X+1/2,-Y,Z-1/2 helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e1dtqA12 B:x,y,z->A:-X+1/2,-Y,Z-1/2 Ribonuclease H-like Interaction Interface Pymol
e1dtqA12 B:-X+1/2,-Y,Z-1/2->A:x,y,z Ribonuclease H-like Interaction Interface Pymol
e1dtqA11 B:X-1/2,-Y-1/2,-Z+1->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol