Domain ID e1e3hA2

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  • A: a+b two layers
  • X: Ribonuclease PH domain 2-like
  • H: Ribonuclease PH domain 2
  • T: Ribonuclease PH domain 2
  • F: RNase_PH_C
UID: 000005773
Type: Manual and representative domain
Range: A:152-262
Ligands: SO4
PDB: 1e3h
PDB Description: GUANOSINE PENTAPHOSPHATE SYNTHETASE
UniProt: Q53597
Species: Streptomyces antibioticus

Structure of domain e1e3hA2

Domains in the same chain:

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e1e3hA5 A:3-151 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1e3hA2 A:152-262 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e1e3hA1 A:263-345 HTH Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
e1e3hA6 A:346-482 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1e3hA3 A:483-578 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e1e3hA4 A:579-583,A:605-632 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)

Domains in the same PDB:

e1e3hA5 A:3-151 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1e3hA2 A:152-262 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e1e3hA1 A:263-345 HTH Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
e1e3hA6 A:346-482 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1e3hA3 A:483-578 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e1e3hA4 A:579-583,A:605-632 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)

Structural contacts of domain e1e3hA2 of H-group "Ribonuclease PH domain 2":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1e3hA2 A:x,y,z->A:-X+2/3,-X+Y+1/3,-Z+1/3 Ribonuclease PH domain 2 Interaction Interface Pymol
e1e3hA5 A:x,y,z->A:-X+2/3,-X+Y+1/3,-Z+1/3 Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e1e3hA2 A:-X+2/3,-X+Y+1/3,-Z+1/3->A:x,y,z Ribonuclease PH domain 2 Interaction Interface Pymol
e1e3hA5 A:-X+2/3,-X+Y+1/3,-Z+1/3->A:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e1e3hA1 A:x,y,z->A:Y,X,-Z Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Interaction Interface Pymol
e1e3hA1 A:Y,X,-Z->A:x,y,z Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Interaction Interface Pymol