Domain ID e1eetB2

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: RVT_1
UID: 000066227
Type: Automatic domain
Parent: e1ztwA1
Range: B:1005-1241
Ligands: BFU
PDB: 1eet
PDB Description: HIV-1 REVERSE TRANSCRIPTASE
UniProt: P03366
Hsap BLAST neighbor: P63135
Species: Human immunodeficiency virus 1

Structure of domain e1eetB2

Domains in the same chain:

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e1eetB2 B:1005-1241 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1eetB1 B:1242-1315 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e1eetB3 B:1316-1427 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Domains in the same PDB:

e1eetA8 A:1-239 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1eetA7 A:240-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e1eetA5 A:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e1eetA6 A:429-557 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1eetB2 B:1005-1241 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1eetB1 B:1242-1315 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e1eetB3 B:1316-1427 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Structural contacts of domain e1eetB2 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1eetA5 B:x,y,z->A:X,Y,Z RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e1eetA8 B:x,y,z->A:X,Y,Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1eetA5 B:x,y,z->A:X-1/2,-Y+3/2,-Z+2 RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e1eetA8 B:x,y,z->A:-X-1/2,-Y+3/2,Z-1/2 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1eetB2 B:x,y,z->B:X,-Y+1,-Z+2 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1eetB2 B:X,-Y+1,-Z+2->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol