Domain ID e1em9B1

Download files:
  • A: alpha bundles
  • X: Retrovirus capsid protein
  • H: Retrovirus capsid protein N-terminal domain
  • T: Retrovirus capsid protein N-terminal domain
  • F: Gag_p24
UID: 000056910
Type: Automatic domain
Parent: e1em9A1
Range: B:1-147
Ligands: MG
PDB: 1em9
PDB Description: GAG POLYPROTEIN CAPSID PROTEIN P27
UniProt: P03322
Species:

Structure of domain e1em9B1

Structural contacts of domain e1em9B1 of H-group "Retrovirus capsid protein N-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1em9A1 B:x,y,z->A:X-1,Y,Z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e1em9A1 B:-X,Y-1/2,-Z+1/2->A:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e1em9A1 B:x,y,z->A:X,Y,Z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e1em9A1 B:-X+1/2,-Y+1,Z-1/2->A:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e1em9A1 B:x,y,z->A:X-1/2,-Y+3/2,-Z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e1em9B1 B:x,y,z->B:-X,Y-1/2,-Z+1/2 Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e1em9B1 B:-X,Y-1/2,-Z+1/2->B:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e1em9B1 B:x,y,z->B:-X-1,Y-1/2,-Z+1/2 Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e1em9B1 B:-X-1,Y-1/2,-Z+1/2->B:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e1em9B1 B:x,y,z->B:X-1,Y,Z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e1em9B1 B:X-1,Y,Z->B:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol