ECOD: domain e1eqrC1

Domain ID e1eqrC1

A: beta barrels
X: OB-fold
H: Nucleic acid-binding proteins
T: Nucleic acid-binding proteins
F: tRNA_anti-codon

UID:	000023552
Type:	Automatic domain
Parent:	e1b8aA1
Range:	C:1-106
PDB:	1eqr
PDB Description:	ASPARTYL-TRNA SYNTHETASE
UniProt:	P21889
Hsap BLAST neighbor:	Q6PI48
Species:	Escherichia coli

Domain
In chain context
In PDB context

Structure of domain e1eqrC1

Domains in the same chain:

Download Pymol

e1eqrC1	C:1-106	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e1eqrC3	C:107-287,C:421-587	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e1eqrC2	C:288-420	Prokaryotic AspRS, insert domain	Prokaryotic AspRS, insert domain	Prokaryotic AspRS, insert domain

Domains in the same PDB:

e1eqrA1	A:1-106	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e1eqrA3	A:107-287,A:421-587	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e1eqrA2	A:288-420	Prokaryotic AspRS, insert domain	Prokaryotic AspRS, insert domain	Prokaryotic AspRS, insert domain
e1eqrB1	B:1-106	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e1eqrB3	B:107-287,B:421-587	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e1eqrB2	B:288-420	Prokaryotic AspRS, insert domain	Prokaryotic AspRS, insert domain	Prokaryotic AspRS, insert domain
e1eqrC1	C:1-106	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e1eqrC3	C:107-287,C:421-587	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e1eqrC2	C:288-420	Prokaryotic AspRS, insert domain	Prokaryotic AspRS, insert domain	Prokaryotic AspRS, insert domain

Structural contacts of domain e1eqrC1 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1eqrC3	C:x,y,z->C:-X+1,Y,-Z-1	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e1eqrC3	C:-X+1,Y,-Z-1->C:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e1eqrB3	C:-X+1/2,Y-1/2,-Z-1->B:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e1eqrA1	C:-X+1/2,Y-1/2,-Z-1->A:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol
e1eqrB1	C:x,y,z->B:-X,Y,-Z-1	Nucleic acid-binding proteins	Interaction Interface Pymol