ECOD: domain e1extA3

Domain ID e1extA3

A: few secondary structure elements
X: EGF-like
H: EGF-related
T: TNF receptor-like
F: Unmapped domains

UID:	000008515
Type:	Manual and representative domain
Range:	A:116-172
Ligands:	MG SO4
PDB:	1ext
PDB Description:	TUMOR NECROSIS FACTOR RECEPTOR
UniProt:	P19438
Hsap BLAST neighbor:	P19438
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e1extA1	A:13-71	EGF-like	EGF-related	TNF receptor-like
e1extA2	A:72-115	EGF-like	EGF-related	TNF receptor-like
e1extA3	A:116-172	EGF-like	EGF-related	TNF receptor-like

Domains in the same PDB:

e1extA1	A:13-71	EGF-like	EGF-related	TNF receptor-like
e1extA2	A:72-115	EGF-like	EGF-related	TNF receptor-like
e1extA3	A:116-172	EGF-like	EGF-related	TNF receptor-like
e1extB1	B:13-71	EGF-like	EGF-related	TNF receptor-like
e1extB2	B:72-115	EGF-like	EGF-related	TNF receptor-like
e1extB3	B:116-168	EGF-like	EGF-related	TNF receptor-like

Structural contacts of domain e1extA3 of H-group "EGF-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1extB1	A:X,Y,Z->B:x,y,z	EGF-related	Interaction Interface Pymol
e1extA1	A:x,y,z->A:-X,Y-1/2,-Z-1/2	EGF-related	Interaction Interface Pymol
e1extB3	A:X-1/2,-Y+1/2,-Z->B:x,y,z	EGF-related	Interaction Interface Pymol
e1extB2	A:X-1/2,-Y+1/2,-Z->B:x,y,z	EGF-related	Interaction Interface Pymol
e1extA1	A:X-1/2,-Y+1/2,-Z->A:x,y,z	EGF-related	Interaction Interface Pymol
e1extA2	A:X-1/2,-Y+1/2,-Z->A:x,y,z	EGF-related	Interaction Interface Pymol
e1extB2	A:x,y,z->B:-X,Y-1/2,-Z+1/2	EGF-related	Interaction Interface Pymol
e1extB3	A:x,y,z->B:-X,Y-1/2,-Z+1/2	EGF-related	Interaction Interface Pymol
e1extB1	A:x,y,z->B:X-1/2,-Y+1/2,-Z	EGF-related	Interaction Interface Pymol