ECOD: domain e1f3tD1

Domain ID e1f3tD1

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: Alanine racemase-C
F: Orn_DAP_Arg_deC

UID:	000021448
Type:	Automatic domain
Parent:	e7odcA1
Range:	D:14-43,D:284-389
Ligands:	PLP PUT
PDB:	1f3t
PDB Description:	ORNITHINE DECARBOXYLASE
UniProt:	P07805
Hsap BLAST neighbor:	P11926
Species:	Trypanosoma brucei

Domains in the same chain:

Download Pymol

e1f3tD1	D:14-43,D:284-389	cradle loop barrel	RIFT-related	Alanine racemase-C
e1f3tD2	D:44-283	TIM beta/alpha-barrel	TIM barrels	TIM barrels

Domains in the same PDB:

e1f3tA2	A:14-59,A:270-422	cradle loop barrel	RIFT-related	Alanine racemase-C
e1f3tA1	A:60-270	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e1f3tB4	B:14-65,B:283-422	cradle loop barrel	RIFT-related	Alanine racemase-C
e1f3tB3	B:66-283	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e1f3tC1	C:14-43,C:284-389	cradle loop barrel	RIFT-related	Alanine racemase-C
e1f3tC2	C:44-283	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e1f3tD1	D:14-43,D:284-389	cradle loop barrel	RIFT-related	Alanine racemase-C
e1f3tD2	D:44-283	TIM beta/alpha-barrel	TIM barrels	TIM barrels

Structural contacts of domain e1f3tD1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1f3tC2	D:x,y,z->C:X,Y,Z	TIM barrels	Interaction Interface Pymol
e1f3tC1	D:x,y,z->C:X,Y,Z	RIFT-related	Interaction Interface Pymol
e1f3tC2	D:X-1,Y,Z->C:x,y,z	TIM barrels	Interaction Interface Pymol
e1f3tC1	D:X-1,Y,Z->C:x,y,z	RIFT-related	Interaction Interface Pymol
e1f3tA1	D:-X+1,Y-1/2,-Z+1->A:x,y,z	TIM barrels	Interaction Interface Pymol