Domain ID e1ffuD2

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  • A: a+b two layers
  • X: beta-Grasp
  • H: Ubiquitin-related
  • T: Ubiquitin-like
  • F: Fer2
UID: 000071980
Type: Automatic domain
Parent: e1n62A2
Range: D:3-81
Ligands: FAD FES
PDB: 1ffu
PDB Description: CUTS, IRON-SULFUR PROTEIN OF CARBON MONOXIDE DEHYDROGENASE
UniProt: P19915
Species: Hydrogenophaga pseudoflava

Structure of domain e1ffuD2

Domains in the same chain:

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e1ffuD2 D:3-81 beta-Grasp Ubiquitin-related Ubiquitin-like
e1ffuD1 D:82-157 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like

Domains in the same PDB:

e1ffuA2 A:3-81 beta-Grasp Ubiquitin-related Ubiquitin-like
e1ffuA1 A:82-157 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e1ffuB2 B:7-143 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e1ffuB1 B:144-430 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e1ffuB3 B:431-803 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e1ffuC2 C:1-177 FAD-binding domain-like FAD-binding domain FAD-binding domain
e1ffuC1 C:178-286 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e1ffuD2 D:3-81 beta-Grasp Ubiquitin-related Ubiquitin-like
e1ffuD1 D:82-157 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e1ffuE2 E:7-143 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e1ffuE3 E:144-430 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e1ffuE4 E:431-803 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e1ffuF2 F:1-177 FAD-binding domain-like FAD-binding domain FAD-binding domain
e1ffuF1 F:178-286 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU

Structural contacts of domain e1ffuD2 of H-group "Ubiquitin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1ffuE2 D:X,Y,Z->E:x,y,z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol
e1ffuE4 D:X,Y,Z->E:x,y,z MocoBD/DmpA-related Interaction Interface Pymol
e1ffuE3 D:X,Y,Z->E:x,y,z MocoBD/DmpA-related Interaction Interface Pymol
e1ffuF2 D:X,Y,Z->F:x,y,z FAD-binding domain Interaction Interface Pymol
e1ffuC1 D:X-1/2,-Y+1/2,-Z+1->C:x,y,z SufE/NifU Interaction Interface Pymol
e1ffuC2 D:X-1/2,-Y+1/2,-Z+1->C:x,y,z FAD-binding domain Interaction Interface Pymol