Domain ID e1ffvE3

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  • A: a+b two layers
  • X: MocoBD/DmpA-related
  • H: MocoBD/DmpA-related
  • T: Molybdenum cofactor-binding domain
  • F: MoCoBD_2
UID: 001873348
Type: Automatic domain
Parent: e1n62B4
Range: E:431-803
Ligands: PCD
PDB: 1ffv
PDB Description: CUTL, MOLYBDOPROTEIN OF CARBON MONOXIDE DEHYDROGENASE
UniProt: P19913
Hsap BLAST neighbor: P47989
Species: Hydrogenophaga pseudoflava

Structure of domain e1ffvE3

Domains in the same chain:

e1ffvE2 E:7-143 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e1ffvE4 E:144-430 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e1ffvE3 E:431-803 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain

Domains in the same PDB:

e1ffvA2 A:3-81 beta-Grasp Ubiquitin-related Ubiquitin-like
e1ffvA1 A:82-157 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e1ffvB2 B:7-143 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e1ffvB3 B:144-430 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e1ffvB1 B:431-803 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e1ffvC2 C:1-177 FAD-binding domain-like FAD-binding domain FAD-binding domain
e1ffvC1 C:178-286 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e1ffvD2 D:3-81 beta-Grasp Ubiquitin-related Ubiquitin-like
e1ffvD1 D:82-157 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e1ffvE2 E:7-143 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e1ffvE4 E:144-430 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e1ffvE3 E:431-803 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e1ffvF2 F:1-177 FAD-binding domain-like FAD-binding domain FAD-binding domain
e1ffvF1 F:178-286 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU

Structural contacts of domain e1ffvE3 of H-group "MocoBD/DmpA-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1ffvD1 E:x,y,z->D:X,Y,Z CO dehydrogenase ISP C-domain like Interaction Interface Pymol
e1ffvD2 E:x,y,z->D:X,Y,Z Ubiquitin-related Interaction Interface Pymol
e1ffvB3 E:x,y,z->B:X,Y,Z MocoBD/DmpA-related Interaction Interface Pymol
e1ffvB1 E:x,y,z->B:X,Y,Z MocoBD/DmpA-related Interaction Interface Pymol
e1ffvF1 E:X,Y,Z->F:x,y,z SufE/NifU Interaction Interface Pymol
e1ffvF2 E:-X+1,Y-1/2,-Z+1/2->F:x,y,z FAD-binding domain Interaction Interface Pymol